Pregenerated sensors for DARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026709Ensembl transcript IDs: ENSMUST00000035430.4
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTGAGTTGCTTTGGTTGTaGTGTCTCCTCACAGCAATA | + |
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Preference number: 2 (lower is better) Translates to: KQIILCQAQSSSNSRSGCELLWL*CLLTAI Trigger: TATTGCTGTGAGGAGACACCACAACCAAAGCAACTC...ACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAAACAGCAATAGAACAGTaGTTAGGACAGCTGCATTTC | + |
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Preference number: 2 (lower is better) Translates to: PGQSGLHRKTLSRKQANKTAIEQ*LGQLHF Trigger: GAAATGCAGCTGTCCTAACCACTGTTCTATTGCTGT...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCCTGGGTATAGAAACATaGTTGGAAAACAGGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: FSPVLQYFKSHICHKCNLLGIET*LENRKT Trigger: AGTCTTCCTGTTTTCCAAGCATGTTTCTATACCCAG...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCATAAGAAAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGATGCTTTATAAAGAGTaGCTTTGGTTGTGGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: SHKKANNSVPGPVFQQQQMLYKE*LWLWCL Trigger: GAGACACCACAACCAAAGCAACTCTTTATAAAGCAT...CTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTTTCTTATGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR GCA 72 bp | ATGGTTCTAATGAGGCTAGATGAACTGAAACCTTGCTaGATTAACTGGCCAGTGTACAGAGGCAACCATGTT | + |
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Preference number: 3 (lower is better) Translates to: MVLMRLDELKPC*INWPVYRGNHV Trigger: AACATGGTTGCCTCTGTACACTGGCCAGTTAATGCAGCAAGGTTTCAGTTCATCTAGCCTCATTAGAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR GCA 72 bp | TTTATGGTTCTAATGAGGCTAGATGAACTGAAACCTTaGTGCATTAACTGGCCAGTGTACAGAGGCAACCAT | + |
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Preference number: 3 (lower is better) Translates to: FMVLMRLDELKP*CINWPVYRGNH Trigger: ATGGTTGCCTCTGTACACTGGCCAGTTAATGCAGCAAGGTTTCAGTTCATCTAGCCTCATTAGAACCATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR TCA 72 bp | ATTTCAAATCACATATCTGCCACAAATGTAACCTCATaGTTCTGGCAACAAGAGATCTGTGAGACAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: ISNHISATNVTS*FWQQEICETAR Trigger: CCTGGCTGTCTCACAGATCTCTTGTTGCCAGAATCATGAGGTTACATTTGTGGCAGATATGTGATTTGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR-3UTR CAA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTCTTCTACACAGACATTaGGTTCTAAAGTCTGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SFTLYKQLGQLRDICSLLLLHRH*VLKSVA Trigger: TGCCACAGACTTTAGAACCAAATGTCTGTGTAGAAG...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR-3UTR CAA 90 bp | ACTGTCTTGAAAAGCCATAAGAAAGCAAATAATTCTGTGCCAGGCCCAGTCTTCGGTATAGAAACATGCTaGGAAAACAGGAAGACTCTA | + |
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Preference number: 3 (lower is better) Translates to: TVLKSHKKANNSVPGPVFGIETC*ENRKTL Trigger: TAGAGTCTTCCTGTTTTCCAAGCATGTTTCTATACC...GAAGACTGGGCCTGGCACAGAATTATTTGCTTTCTTATGGCTTTTCAAGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| 3UTR GCA 72 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTaGCACAAATGTAACCTCATGATTCTGGCAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: FSPVLQYFKSHI*HKCNLMILATR Trigger: TCTTGTTGCCAGAATCATGAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | AAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTTCCATCCACACAGAGTaGCTTCTTGGCCTAAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KQIILCQAQSSSNSRSGCSIHTE*LLGLSG Trigger: CCCACTTAGGCCAAGAAGTCACTCTGTGTGGATGGA...ACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | ATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTAGCCGCAAGTTGTACTaGATCTGGAAGCTGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IILCQAQSSSNSRSGCRTSRKLY*IWKLRR Trigger: TCTGCGCAGCTTCCAGATGCAGTACAACTTGCGGCT...AGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | ATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTCTGTCTATCCGGTCTTaGGCCTTCATCTCGGTAACA | + |
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Preference number: 4 (lower is better) Translates to: IILCQAQSSSNSRSGCRTLSIRS*AFISVT Trigger: TGTTACCGAGATGAAGGCTCAAGACCGGATAGACAG...AGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | ATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTTTGGGGCTTAGCCAGTaGATCCTGAAGGAATCTGAG | + |
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Preference number: 4 (lower is better) Translates to: IILCQAQSSSNSRSGCRTLGLSQ*ILKESE Trigger: CTCAGATTCCTTCAGGATGCACTGGCTAAGCCCCAA...AGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | CAGACAGTCCTAATGGTACACATGACCAAGTCACAATTGTGTAGCTTCTCTTTCCCCAGATTGGCCGCATaGTCTTCCCGATGGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QTVLMVHMTKSQLCSFSFPRLAA*SSRWVW Trigger: CCAGACCCATCGGGAAGACCATGCGGCCAATCTGGG...GAAAGAGAAGCTACACAATTGTGACTTGGTCATGTGTACCATTAGGACTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | CCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTCTCAGCTACTTCTATACACAGAGTGACTTCTTaGCCTAAGTGGGACGAACGC | + |
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Preference number: 4 (lower is better) Translates to: PSLPATAGQDVELSATSIHRVTS*PKWDER Trigger: GCGTTCGTCCCACTTAGGCCAAGAAGTCACTCTGTG...TATAGAAGTAGCTGAGAGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | ATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTAAGAGCTCAAGTGTTTaGAAGGTGTGGCGGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: IILCQAQSSSNSRSGCRTKSSSV*KVWRMH Trigger: GTGCATCCGCCACACCTTCCAAACACTTGAGCTCTT...AGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAATCCATAGGTGGCCAGTaGCTCAGCAAAAGTCATGGA | + |
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Preference number: 4 (lower is better) Translates to: PGQSGLHRKTLSRKQANKSIGGQ*LSKSHG Trigger: TCCATGACTTTTGCTGAGGCACTGGCCACCTATGGA...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGAAATGGGTGATGGGCTaGCTCCAGCTCTGTGGGACT | + |
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Preference number: 4 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKKWVMG*LQLCGT Trigger: AGTCCCACAGAGCTGGAGTCAGCCCATCACCCATTT...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | CCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTCTCAGCTACTTCTATACCAGGCCAGGAATACTaGAGCAAACCCTCAACTAAA | + |
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Preference number: 4 (lower is better) Translates to: PSLPATAGQDVELSATSIPGQEY*SKPSTK Trigger: TTTAGTTGAGGGTTTGCTGCAGTATTCCTGGCCTGG...TATAGAAGTAGCTGAGAGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGAAAAGAGAACACTGCTaGGTCTCGGAGCACCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKKREHC*VSEHRS Trigger: GGAGCGGTGCTCCGAGACCCAGCAGTGTTCTCTTTT...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAATGGGACTCTCTTCCTTaGCAAGGAAGAGTGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: PGQSGLHRKTLSRKQANKWDSLP*QGRVES Trigger: ACTTTCCACTCTTCCTTGCCAAGGAAGAGAGTCCCA...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | GATTCTGGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTACTGACTCCAGCTCTGTaGGACTCTCTTCCTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: DSGNKRSVRQPGQVSFTLLTPAL*DSLPWQ Trigger: TTGCCAAGGAAGAGAGTCCCACAGAGCTGGAGTCAG...TAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCCAGAATC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | AAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTGTCATGAACACATATTaGTTTGACAGTTCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KQIILCQAQSSSNSRSGCVMNTY*FDSSLG Trigger: CCCCAAGGAACTGTCAAAGCAATATGTGTTCATGAC...ACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | GATTCTGGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTAGTACTAAAAACTCCTTaGCACCTCCAGGGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: DSGNKRSVRQPGQVSFTLVLKTP*HLQGSS Trigger: AGAGGACCCCTGGAGGTGCCAAGGAGTTTTTAGTAC...TAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCCAGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | AAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCCT | + |
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Preference number: 4 (lower is better) Translates to: KQIILCQAQSSSNSRSGCTFQVP*MVLKTP Trigger: AGGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGT...ACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | CCCAGTCTTCCAGCAACAGCAGGTCAGGATGTAGAACTCTCAGCTACTTCTATACCCAAAGCGAGTATCTaGCTTATCAGTTCCATAGGT | + |
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Preference number: 4 (lower is better) Translates to: PSLPATAGQDVELSATSIPKASI*LISSIG Trigger: ACCTATGGAACTGATAAGCCAGATACTCGCTTTGGG...TATAGAAGTAGCTGAGAGTTCTACATCCTGACCTGCTGTTGCTGGAAGACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTAGGCTTCAGCTCTTCTaGAGACACGGAGTCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SFTLYKQLGQLRDICSLLRLQLF*RHGVWS Trigger: GCTCCAGACTCCGTGTCTCCAGAAGAGCTGAAGCCT...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | AGGGCTACAGAGAGTAATCCTGTCTTGAAAAACCATAAACAAGAACCACAGGCATGGGGAATGAGAATCTaGACAAGGCCGTGGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: RATESNPVLKNHKQEPQAWGMRI*TRPWQS Trigger: AGATTGCCACGGCCTTGTTCAGATTCTCATTCCCCA...TGCCTGTGGTTCTTGTTTATGGTTTTTCAAGACAGGATTACTCTCTGTAGCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | CAGACAGTCCTAATGGTACACATGACCAAGTCACAATTGTGTAGCTTCTCTTTCCAAAGGGCAGCTTTTTaGAGGCATTCAGGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QTVLMVHMTKSQLCSFSFQRAAF*RHSGAQ Trigger: CTGAGCTCCTGAATGCCTGCAAAAAGCTGCCCTTTG...GAAAGAGAAGCTACACAATTGTGACTTGGTCATGTGTACCATTAGGACTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | GATTCTGGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTAATTTTCATGACCATCTaGGACCTCAGCCGCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: DSGNKRSVRQPGQVSFTLIFMTI*DLSRKL Trigger: CAACTTGCGGCTGAGGTCGCAGATGGTCATGAAAAT...TAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCCAGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGATCTCTGATGCTGGGTaGTCCCGTGACAAGACATAC | + |
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Preference number: 4 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKISDAG*SRDKTY Trigger: GTATGTCTTGTCACGGGAGCACCCAGCATCAGAGAT...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | ACTGTCTTGAAAAGCCATAAGAAAGCAAATAATTCTGTGCCAGGCCCAGTCTTCTCTTCCCGATGGGTCTaGATAAACCCCTGCATAGAC | + |
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Preference number: 4 (lower is better) Translates to: TVLKSHKKANNSVPGPVFSSRWV*INPCID Trigger: GTCTATGCAGGGGTTTATCCAGACCCATCGGGAAGA...GAAGACTGGGCCTGGCACAGAATTATTTGCTTTCTTATGGCTTTTCAAGACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTAAGAGAACCCCAGATTaGCCGCATGGTCTTCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: SFTLYKQLGQLRDICSLLKRTPD*PHGLPD Trigger: ATCGGGAAGACCATGCGGCCAATCTGGGGTTCTCTT...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | GATTCTGGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTAACTCTCCACATGTGTTaGTCCGAGCAACAAAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: DSGNKRSVRQPGQVSFTLTLHMC*SEQQSY Trigger: GTAGCTTTGTTGCTCGGACCAACACATGTGGAGAGT...TAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCCAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGCGGATTCTCTTGTCCTaGAGGACGGGAGATTACTGT | + |
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Preference number: 4 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKRILLS*RTGDYC Trigger: ACAGTAATCTCCCGTCCTCCAGGACAAGAGAATCCG...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGACTGCATCTGGAAGCTaGGCAGATCTAAGTAGCGAT | + |
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Preference number: 4 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKTASGS*ADLSSD Trigger: ATCGCTACTTAGATCTGCGCAGCTTCCAGATGCAGT...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR GCA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAACACCTCCTATCTCATTaGCGTTTAAAACCAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: PGQSGLHRKTLSRKQANKHLLSH*RLKPSH Trigger: ATGACTTGGTTTTAAACGGCAATGAGATAGGAGGTG...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTACTTCTTGGCCTAAGTaGGACGAACGCAACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SFTLYKQLGQLRDICSLLTSWPK*DERNSP Trigger: TGGAGAGTTGCGTTCGTCCCACTTAGGCCAAGAAGT...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | AAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGGTCAGGATGTCCTCTTAAACAAGGTTaGGGTTTCTATATCCACAAA | + |
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Preference number: 4 (lower is better) Translates to: KQIILCQAQSSSNSRSGCPLKQG*GFYIHK Trigger: TTTGTGGATATAGAAACCCCAACCTTGTTTAAGAGG...ACATCCTGACCTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | AGGGCTACAGAGAGTAATCCTGTCTTGAAAAACCATAAACAAGAACCACAGGCACTTGGCAAGGAAGAGTaGAAAGTCAACCACCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RATESNPVLKNHKQEPQALGKEE*KVNHPK Trigger: CTTTGGGTGGTTGACTTTCCACTCTTCCTTGCCAAG...TGCCTGTGGTTCTTGTTTATGGTTTTTCAAGACAGGATTACTCTCTGTAGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCGGAGCAGTAAATGGGTaGTGGGCTGACTCCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLGAVNG*WADSSS Trigger: AGAGCTGGAGTCAGCCCATCACCCATTTACTGCTCC...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCTGCACTCTCCTCTTCTaGGTCTGCTGGCCACAAGAC | + |
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Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLCTLLF*VCWPQD Trigger: GTCTTGTGGCCAGCAGACTCAGAAGAGGAGAGTGCA...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCGCATGGTCTTCCCGATaGGTCTGGATAAACCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLAWSSR*VWINPC Trigger: GCAGGGGTTTATCCAGACCCATCGGGAAGACCATGC...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CCA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGTCAACGCCAGATTTCTaGAAAGAGAACCCCAGATTG | + |
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Preference number: 4 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKSTPDF*KENPRL Trigger: CAATCTGGGGTTCTCTTTCCAGAAATCTGGCGTTGA...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR TCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCATTCCCGCATTTTCATaGCCATCTGCGACCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLIPAFS*PSATSA Trigger: GGCTGAGGTCGCAGATGGTCATGAAAATGCGGGAAT...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR GCA 90 bp | AGGGCTACAGAGAGTAATCCTGTCTTGAAAAACCATAAACAAGAACCACAGGCAGTCTGGATAAACCCCTaGATAGACGACTTAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RATESNPVLKNHKQEPQAVWINP*IDDLTK Trigger: TTTGGTTAAGTCGTCTATGCAGGGGTTTATCCAGAC...TGCCTGTGGTTCTTGTTTATGGTTTTTCAAGACAGGATTACTCTCTGTAGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR GCA 90 bp | AATTGTGTAGCTTCTCTTTCTTACTCGGTAATGATTGCTTCTACACAGACATTTAAGAAAAGAGAACACTaGTGGGTCTCGGAGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: NCVASLSYSVMIASTQTFKKREH*WVSEHR Trigger: GCGGTGCTCCGAGACCCAGCAGTGTTCTCTTTTCTT...AAATGTCTGTGTAGAAGCAATCATTACCGAGTAAGAAAGAGAAGCTACACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| 3UTR CAA 72 bp | CAGACAGTCCTAATGGTACACATGACCAAGTCACAATaGTGTAGCTTCTCTTTCTTACTCGGTAATGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTVLMVHMTKSQ*CSFSFLLGNDC Trigger: GCAATCATTACCGAGTAAGAAAGAGAAGCTACACAATTGTGACTTGGTCATGTGTACCATTAGGACTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR TCA 90 bp | AGGGCTACAGAGAGTAATCCTGTCTTGAAAAACCATAAACAAGAACCACAGGCAGAGCAACAAAGCTACTaGATTCTGGAATTCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RATESNPVLKNHKQEPQAEQQSY*ILEFFV Trigger: CACAAAGAATTCCAGAATTCAGTAGCTTTGTTGCTC...TGCCTGTGGTTCTTGTTTATGGTTTTTCAAGACAGGATTACTCTCTGTAGCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR GCA 90 bp | ACTGTCTTGAAAAGCCATAAGAAAGCAAATAATTCTGTGCCAGGCCCAGTCTTCATATCCACAAACCCGTaGAGATTACAGAGATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLKSHKKANNSVPGPVFISTNP*RLQRYS Trigger: GGAATATCTCTGTAATCTGCACGGGTTTGTGGATAT...GAAGACTGGGCCTGGCACAGAATTATTTGCTTTCTTATGGCTTTTCAAGACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR TCA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTTTCTGGAATTCTTTGTaGACTCAACGCCAGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFTLYKQLGQLRDICSLLFWNSL*TQRQIS Trigger: AGAAATCTGGCGTTGAGTTCACAAAGAATTCCAGAA...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR GCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCCAACTAAACGCTGAATaGCAGTCTGCTCTACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLQLNAE*QSALQR Trigger: CCTTTGTAGAGCAGACTGGCATTCAGCGTTTAGTTG...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR GCA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTACTGAAATGGTGAACTaGAAACTTCCTAATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTLYKQLGQLRDICSLLTEMVN*KLPNEL Trigger: GAGTTCATTAGGAAGTTTGCAGTTCACCATTTCAGT...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCGTATCTCCATCGATCTaGCTAATTCCAGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLVSPSI*LIPVFP Trigger: AGGAAAGACTGGAATTAGCCAGATCGATGGAGATAC...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR TCA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCTATTTCGCTCCGTCATaGACACATATTGCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSPVLQYFKSHICHKCNLYFAPS*THIALT Trigger: TGTCAAAGCAATATGTGTTCATGACGGAGCGAAATA...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS CCA 90 bp | GTCTGCTGGCCACAAGACGTGGATATGGTAAGGCTTCAGCTCTTCTaGAGACACGGAGTCTGGAGCATTGCTCATAAGGTCCTGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VCWPQDVDMVRLQLF*RHGVWSIAHKVLSS Trigger: CGAGGACAGGACCTTATGAGCAATGCTCCAGACTCCGTGTCTCCAGAAGAGCTGAAGCCTTACCATATCCACGTCTTGTGGCCAGCAGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS GCA 90 bp | GGCAAGGAAGAGTGGAAAGTCAACCACCCAAAGAAAAGAGAACACTaGTGGGTCTCGGAGCACCGCTCCTCTCATCTCCAAAAGGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GKEEWKVNHPKKREH*WVSEHRSSHLQKVC Trigger: GCAGACCTTTTGGAGATGAGAGGAGCGGTGCTCCGAGACCCAGCAGTGTTCTCTTTTCTTTGGGTGGTTGACTTTCCACTCTTCCTTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | CTAAGAAGGTGTTCTGCCTGCGGTACTGAATCCATCCACACAGAGTaGCTTCTTGGCCTAAGTGGGACGAACGCAACTCTCCACATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRRCSACGTESIHTE*LLGLSGTNATLHMC Trigger: ACACATGTGGAGAGTTGCGTTCGTCCCACTTAGGCCAAGAAGTCACTCTGTGTGGATGGATTCAGTACCGCAGGCAGAACACCTTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | ATCCTCCTCACAGATGCGGCTGACTCATCCTGGGGAATGAGAATCTaGACAAGGCCGTGGCAATCTCTTAGGACTAAGAAGGTGTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILLTDAADSSWGMRI*TRPWQSLRTKKVFC Trigger: GCAGAACACCTTCTTAGTCCTAAGAGATTGCCACGGCCTTGTTCAGATTCTCATTCCCCAGGATGAGTCAGCCGCATCTGTGAGGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS GCA 90 bp | AACCCGTGCAGATTACAGAGATATTCCCGCATTTTCATGACCATCTaGGACCTCAGCCGCAAGTTGTACTGCATCTGGAAGCTGCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPCRLQRYSRIFMTI*DLSRKLYCIWKLRR Trigger: TCTGCGCAGCTTCCAGATGCAGTACAACTTGCGGCTGAGGTCGCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCACGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS CCA 90 bp | AAGGAAGAGTGGAAAGTCAACCACCCAAAGAAAAGAGAACACTGCTaGGTCTCGGAGCACCGCTCCTCTCATCTCCAAAAGGTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KEEWKVNHPKKREHC*VSEHRSSHLQKVCT Trigger: TGTGCAGACCTTTTGGAGATGAGAGGAGCGGTGCTCCGAGACCCAGCAGTGTTCTCTTTTCTTTGGGTGGTTGACTTTCCACTCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS CCA 90 bp | GACGTGGATATGGTAAGGCTTCAGCTCTTCTGGAGACACGGAGTCTaGAGCATTGCTCATAAGGTCCTGTCCTCGGTAGGATTTAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DVDMVRLQLFWRHGV*SIAHKVLSSVGFRE Trigger: TTCCCTAAATCCTACCGAGGACAGGACCTTATGAGCAATGCTCCAGACTCCGTGTCTCCAGAAGAGCTGAAGCCTTACCATATCCACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | CACACAAAATCCTCCTCACAGATGCGGCTGACTCATCCTGGGGAATaGGAATCTGAACAAGGCCGTGGCAATCTCTTAGGACTAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTKSSSQMRLTHPGE*ESEQGRGNLLGLRR Trigger: CCTTCTTAGTCCTAAGAGATTGCCACGGCCTTGTTCAGATTCTCATTCCCCAGGATGAGTCAGCCGCATCTGTGAGGAGGATTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAAGTGGGACTCTCTTCCTaGGCAAGGAAGAGTGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGQSGLHRKTLSRKQANKVGLSS*ARKSGK Trigger: CTTTCCACTCTTCCTTGCCAAGGAAGAGAGTCCCAC...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | TATCCACAAACCCGTGCAGATTACAGAGATATTCCCGCATTTTCATaGCCATCTGCGACCTCAGCCGCAAGTTGTACTGCATCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: YPQTRADYRDIPAFS*PSATSAASCTASGS Trigger: GCTTCCAGATGCAGTACAACTTGCGGCTGAGGTCGCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCACGGGTTTGTGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | CATCTCTATGTCAATCTGAGTGAACTCTGGCTGTCTATCCGGTCTTaGGCCTTCATCTCGGTAACACCGAGCGACCTGAAAATACCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLYVNLSELWLSIRS*AFISVTPSDLKIPV Trigger: GACAGGTATTTTCAGGTCGCTCGGTGTTACCGAGATGAAGGCTCAAGACCGGATAGACAGCCAGAGTTCACTCAGATTGACATAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | AGCCATAAGAAAGCAAATAATTCTGTGCCAGGCCCAGTCTTCCAGCAACAGCAGAACCAAGTCATAGTGTaGGCCACGAACCTTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SHKKANNSVPGPVFQQQQNQVIV*ATNLFR Trigger: CCGGAAAAGGTTCGTGGCCAACACTATGACTTGGTT...CTGCTGTTGCTGGAAGACTGGGCCTGGCACAGAATTATTTGCTTTCTTATGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS GCA 90 bp | GTAGCTGTGCATCATGGATTCGGACAGAACCACCTCCTATCTCATTaGCGTTTAAAACCAAGTCATAGTGTTGGCCACGAACCTTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VAVHHGFGQNHLLSH*RLKPSHSVGHEPFP Trigger: CGGAAAAGGTTCGTGGCCAACACTATGACTTGGTTTTAAACGGCAATGAGATAGGAGGTGGTTCTGTCCGAATCCATGATGCACAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | ACTGTCTTGAAAAGCCATAAGAAAGCAAATAATTCTGTGCCAGGCCCAGTCTTCGACCTCAGCCGCAAGTaGTACTGCATCTGGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVLKSHKKANNSVPGPVFDLSRK*YCIWKL Trigger: CAGCTTCCAGATGCAGTACAACTTGCGGCTGAGGTC...GAAGACTGGGCCTGGCACAGAATTATTTGCTTTCTTATGGCTTTTCAAGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | ACACATATTGCTTTGACAGTTCCTTGGGGCTTAGCCAGTGCATCCTaGAGGAATCTGAGCTCTGTGTTTCTGAACACATCACTGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: THIALTVPWGLASAS*RNLSSVFLNTSLTS Trigger: GGATGTCAGTGATGTGTTCAGAAACACAGAGCTCAGATTCCTTCAGGATGCACTGGCTAAGCCCCAAGGAACTGTCAAAGCAATATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 90 bp | GAACACATCACTGACATCCACAATCTTCATCCCAAAGCGAGTATCTaGCTTATCAGTTCCATAGGTGGCCAGTGCCTCAGCAAAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: EHITDIHNLHPKASI*LISSIGGQCLSKSH Trigger: ATGACTTTTGCTGAGGCACTGGCCACCTATGGAACTGATAAGCCAGATACTCGCTTTGGGATGAAGATTGTGGATGTCAGTGATGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 90 bp | TCCTTTAGCAGTGTTTCCAGGATGTACCTCTGTAGCTGTGCATCATaGATTCGGACAGAACCACCTCCTATCTCATTGCCGTTTAAAACC | + |
|
Preference number: 5 (lower is better) Translates to: SFSSVSRMYLCSCAS*IRTEPPPISLPFKT Trigger: GGTTTTAAACGGCAATGAGATAGGAGGTGGTTCTGTCCGAATCCATGATGCACAGCTACAGAGGTACATCCTGGAAACACTGCTAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CAA 90 bp | TCATTCACATTATATAAGCAGCTGGGGCAGCTAAGAGACATTTGTAGCTTGCTTGGTACTAAAAACTCCTaGGCACCTCCAGGGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFTLYKQLGQLRDICSLLGTKNS*APPGVL Trigger: GAGGACCCCTGGAGGTGCCAAGGAGTTTTTAGTACC...AAGCAAGCTACAAATGTCTCTTAGCTGCCCCAGCTGCTTATATAATGTGAATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS-3UTR CAA 90 bp | AGGGCTACAGAGAGTAATCCTGTCTTGAAAAACCATAAACAAGAACCACAGGCAGCTGTCTATCCGGTCTaGAGCCTTCATCTCGGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RATESNPVLKNHKQEPQAAVYPV*SLHLGN Trigger: GTTACCGAGATGAAGGCTCAAGACCGGATAGACAGC...TGCCTGTGGTTCTTGTTTATGGTTTTTCAAGACAGGATTACTCTCTGTAGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTCCTAATGGTACACATGACCAAGTCACAATTGTGTAGCTTCTCTTTCACGGAGTCTGGAGCATaGCTCATAAGGTCCTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QTVLMVHMTKSQLCSFSFTESGA*LIRSCP Trigger: AGGACAGGACCTTATGAGCAATGCTCCAGACTCCGT...GAAAGAGAAGCTACACAATTGTGACTTGGTCATGTGTACCATTAGGACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS GCA 90 bp | GTCATGAACACATATTGCTTTGACAGTTCCTTGGGGCTTAGCCAGTaGATCCTGAAGGAATCTGAGCTCTGTGTTTCTGAACACATCACT | + |
|
Preference number: 5 (lower is better) Translates to: VMNTYCFDSSLGLSQ*ILKESELCVSEHIT Trigger: AGTGATGTGTTCAGAAACACAGAGCTCAGATTCCTTCAGGATGCACTGGCTAAGCCCCAAGGAACTGTCAAAGCAATATGTGTTCATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | GATTCTGGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTACAGAAGCTGCTTAAATaGCTGAGGACTTTGAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSGNKRSVRQPGQVSFTLQKLLK*LRTLRE Trigger: CTCCCTCAAAGTCCTCAGCAATTTAAGCAGCTTCTG...TAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCCAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | ACGAACGCAACTCTCCACATGTGTTGGTCCGAGCAACAAAGCTACTaGATTCTGGAATTCTTTGTGAACTCAACGCCAGATTTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TNATLHMCWSEQQSY*ILEFFVNSTPDFWK Trigger: TTTCCAGAAATCTGGCGTTGAGTTCACAAAGAATTCCAGAATTCAGTAGCTTTGTTGCTCGGACCAACACATGTGGAGAGTTGCGTTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAATCAGCTGTTTTAACTTaGATTTCAATCTCACCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PGQSGLHRKTLSRKQANKSAVLT*ISISPV Trigger: GACGGGTGAGATTGAAATCAAAGTTAAAACAGCTGA...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | CCAGGACAGTCAGGGCTACACAGAAAAACCCTGTCTCGAAAACAGGCAAACAAAAAATTGCTGAGGACTTaGAGGGAGGGAATAAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: PGQSGLHRKTLSRKQANKKLLRT*REGIKL Trigger: AAGTTTTATTCCCTCCCTCAAAGTCCTCAGCAATTT...TTTGTTTGCCTGTTTTCGAGACAGGGTTTTTCTGTGTAGCCCTGACTGTCCTGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 90 bp | CTAATGAACTCAATGTCTTCCTTCCTTAAGTATTTCGCTCCGTCATaGACACATATTGCTTTGACAGTTCCTTGGGGCTTAGCCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LMNSMSSFLKYFAPS*THIALTVPWGLASA Trigger: TGCACTGGCTAAGCCCCAAGGAACTGTCAAAGCAATATGTGTTCATGACGGAGCGAAATACTTAAGGAAGGAAGACATTGAGTTCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | GGCAACAAGAGATCTGTGAGACAGCCAGGACAAGTGTCATTCACATTATATAAGCACTATGTCTTCTTCTaGTATCTCCATCGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNKRSVRQPGQVSFTLYKHYVFF*YLHRSG Trigger: GCCAGATCGATGGAGATACAAGAAGAAGACATAGTG...CTTATATAATGTGAATGACACTTGTCCTGGCTGTCTCACAGATCTCTTGTTGCC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | AGGGCTACAGAGAGTAATCCTGTCTTGAAAAACCATAAACAAGAACCACAGGCAGAACTCCAGTTCTTCTaGGCATTCAGGAATATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RATESNPVLKNHKQEPQAELQFF*AFRNIG Trigger: ACCTATATTCCTGAATGCCAAGAAGAACTGGAGTTC...TGCCTGTGGTTCTTGTTTATGGTTTTTCAAGACAGGATTACTCTCTGTAGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | CACAGACATTTGGTTCTAAAGTCTGTGGCAGGTCTGGATCTTAATTTAAGTTTGCCACCTCCTATCTCATaGCCGTTTAAAACCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRHLVLKSVAGLDLNLSLPPPIS*PFKTKS Trigger: TGACTTGGTTTTAAACGGCAATGAGATAGGAGGTGG...CAAACTTAAATTAAGATCCAGACCTGCCACAGACTTTAGAACCAAATGTCTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS-3UTR CAA 90 bp | TTCAGTCCTGTTTTACAGTATTTCAAATCACATATCTGCCACAAATGTAACCTCAACTCTCCACATGTGTaGGTCCGAGCAACAAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: FSPVLQYFKSHICHKCNLNSPHV*VRATKL Trigger: TAGCTTTGTTGCTCGGACCAACACATGTGGAGAGTT...GAGGTTACATTTGTGGCAGATATGTGATTTGAAATACTGTAAAACAGGACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS GCA 72 bp | GCGACCTCAGCCGCAAGTTGTACTGCATCTGGAAGCTaGGCAGATCTAAGTAGCGATACTGCAAACGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ATSAASCTASGS*ADLSSDTANGA Trigger: CGCTCCGTTTGCAGTATCGCTACTTAGATCTGCGCAGCTTCCAGATGCAGTACAACTTGCGGCTGAGGTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS TCA 72 bp | TGTTCTGCCTGCGGTACTGAATCCATCCACACAGAGTaGCTTCTTGGCCTAAGTGGGACGAACGCAACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CSACGTESIHTE*LLGLSGTNATL Trigger: GAGAGTTGCGTTCGTCCCACTTAGGCCAAGAAGTCACTCTGTGTGGATGGATTCAGTACCGCAGGCAGAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS GCA 72 bp | GAGTGGAAAGTCAACCACCCAAAGAAAAGAGAACACTaGTGGGTCTCGGAGCACCGCTCCTCTCATCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: EWKVNHPKKREH*WVSEHRSSHLQ Trigger: TTGGAGATGAGAGGAGCGGTGCTCCGAGACCCAGCAGTGTTCTCTTTTCTTTGGGTGGTTGACTTTCCACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS CCA 72 bp | AAAGAGAACCCCAGATTGGCCGCATGGTCTTCCCGATaGGTCTGGATAAACCCCTGCATAGACGACTTAACC | + |
|
Preference number: 6 (lower is better) Translates to: KENPRLAAWSSR*VWINPCIDDLT Trigger: GGTTAAGTCGTCTATGCAGGGGTTTATCCAGACCCATCGGGAAGACCATGCGGCCAATCTGGGGTTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS CCA 72 bp | CCAGATTTCTGGAAAGAGAACCCCAGATTGGCCGCATaGTCTTCCCGATGGGTCTGGATAAACCCCTGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PDFWKENPRLAA*SSRWVWINPCI Trigger: TATGCAGGGGTTTATCCAGACCCATCGGGAAGACCATGCGGCCAATCTGGGGTTCTCTTTCCAGAAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
||
| CDS CCA 72 bp | ATGGTAAGGCTTCAGCTCTTCTGGAGACACGGAGTCTaGAGCATTGCTCATAAGGTCCTGTCCTCGGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: MVRLQLFWRHGV*SIAHKVLSSVG Trigger: TCCTACCGAGGACAGGACCTTATGAGCAATGCTCCAGACTCCGTGTCTCCAGAAGAGCTGAAGCCTTACCAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | GTCAATCTGAGTGAACTCTGGCTGTCTATCCGGTCTTaGGCCTTCATCTCGGTAACACCGAGCGACCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VNLSELWLSIRS*AFISVTPSDLK Trigger: TTTCAGGTCGCTCGGTGTTACCGAGATGAAGGCTCAAGACCGGATAGACAGCCAGAGTTCACTCAGATTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS GCA 72 bp | GCGAGTATCTGGCTTATCAGTTCCATAGGTGGCCAGTaGCTCAGCAAAAGTCATGGAAGGGAAAGGAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: ASIWLISSIGGQ*LSKSHGRERSH Trigger: GTGACTCCTTTCCCTTCCATGACTTTTGCTGAGGCACTGGCCACCTATGGAACTGATAAGCCAGATACTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 72 bp | TGGAAAGTCAACCACCCAAAGAAAAGAGAACACTGCTaGGTCTCGGAGCACCGCTCCTCTCATCTCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: WKVNHPKKREHC*VSEHRSSHLQK Trigger: CTTTTGGAGATGAGAGGAGCGGTGCTCCGAGACCCAGCAGTGTTCTCTTTTCTTTGGGTGGTTGACTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | ACAGATGCGGCTGACTCATCCTGGGGAATGAGAATCTaGACAAGGCCGTGGCAATCTCTTAGGACTAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: TDAADSSWGMRI*TRPWQSLRTKK Trigger: CTTCTTAGTCCTAAGAGATTGCCACGGCCTTGTTCAGATTCTCATTCCCCAGGATGAGTCAGCCGCATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | ACCCGTGCAGATTACAGAGATATTCCCGCATTTTCATaGCCATCTGCGACCTCAGCCGCAAGTTGTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: TRADYRDIPAFS*PSATSAASCTA Trigger: TGCAGTACAACTTGCGGCTGAGGTCGCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCTGCACGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 72 bp | CTCCTTGGCACCTCCAGGGGTCCTCTTAAACAAGGTTaGGGTTTCTATATCCACAAACCCGTGCAGATTACA | + |
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Preference number: 6 (lower is better) Translates to: LLGTSRGPLKQG*GFYIHKPVQIT Trigger: TGTAATCTGCACGGGTTTGTGGATATAGAAACCCCAACCTTGTTTAAGAGGACCCCTGGAGGTGCCAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 72 bp | GACTTTGAGGGAGGGAATAAAACTTTCCAGGTTCCCTaGATGGTACTAAAAACTCCTTGGCACCTCCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: DFEGGNKTFQVP*MVLKTPWHLQG Trigger: CCCCTGGAGGTGCCAAGGAGTTTTTAGTACCATCCAGGGAACCTGGAAAGTTTTATTCCCTCCCTCAAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 72 bp | TCCCAAAGCGAGTATCTGGCTTATCAGTTCCATAGGTaGCCAGTGCCTCAGCAAAAGTCATGGAAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: SQSEYLAYQFHR*PVPQQKSWKGK Trigger: CTTTCCCTTCCATGACTTTTGCTGAGGCACTGGCCACCTATGGAACTGATAAGCCAGATACTCGCTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 72 bp | AGTGTTTCCAGGATGTACCTCTGTAGCTGTGCATCATaGATTCGGACAGAACCACCTCCTATCTCATTGCCG | + |
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Preference number: 6 (lower is better) Translates to: SVSRMYLCSCAS*IRTEPPPISLP Trigger: CGGCAATGAGATAGGAGGTGGTTCTGTCCGAATCCATGATGCACAGCTACAGAGGTACATCCTGGAAACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CAA 72 bp | GATTTCAATCTCACCCGTCGGCATTTTCGGATTCTCTaGTCCTGGAGGACGGGAGATTACTGTCCCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: DFNLTRRHFRIL*SWRTGDYCPRY Trigger: GTATCTGGGACAGTAATCTCCCGTCCTCCAGGACAAGAGAATCCGAAAATGCCGACGGGTGAGATTGAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CAA 72 bp | CGCTCCGTCATGAACACATATTGCTTTGACAGTTCCTaGGGGCTTAGCCAGTGCATCCTGAAGGAATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RSVMNTYCFDSS*GLSQCILKESE Trigger: CTCAGATTCCTTCAGGATGCACTGGCTAAGCCCCAAGGAACTGTCAAAGCAATATGTGTTCATGACGGAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | CCAGTCTGCTCTACAAAGGACATCTCTATGTCAATCTaGGTGAACTCTGGCTGTCTATCCGGTCTTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PVCSTKDISMSI*VNSGCLSGLEP Trigger: AGGCTCAAGACCGGATAGACAGCCAGAGTTCACTCAGATTGACATAGAGATGTCCTTTGTAGAGCAGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | GGCCAGGAATACTGCAGCAAACCCTCAACTAAACGCTaGATGCCAGTCTGCTCTACAAAGGACATCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: GQEYCSKPSTKR*MPVCSTKDISM Trigger: CATAGAGATGTCCTTTGTAGAGCAGACTGGCATTCAGCGTTTAGTTGAGGGTTTGCTGCAGTATTCCTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CAA 72 bp | TGGCCTAAGTGGGACGAACGCAACTCTCCACATGTGTaGGTCCGAGCAACAAAGCTACTGAATTCTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: WPKWDERNSPHV*VRATKLLNSGI Trigger: AATTCCAGAATTCAGTAGCTTTGTTGCTCGGACCAACACATGTGGAGAGTTGCGTTCGTCCCACTTAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CAA 90 bp | GTGACTTCTTGGCCTAAGTGGGACGAACGCAACTCTCCACATGTGTaGGTCCGAGCAACAAAGCTACTGAATTCTGGAATTCTTTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: VTSWPKWDERNSPHV*VRATKLLNSGILCE Trigger: TTCACAAAGAATTCCAGAATTCAGTAGCTTTGTTGCTCGGACCAACACATGTGGAGAGTTGCGTTCGTCCCACTTAGGCCAAGAAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CAA 90 bp | TTTAACTTTGATTTCAATCTCACCCGTCGGCATTTTCGGATTCTCTaGTCCTGGAGGACGGGAGATTACTGTCCCAGATACTCTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: FNFDFNLTRRHFRIL*SWRTGDYCPRYSHH Trigger: GTGGTGAGAGTATCTGGGACAGTAATCTCCCGTCCTCCAGGACAAGAGAATCCGAAAATGCCGACGGGTGAGATTGAAATCAAAGTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS GCA 72 bp | AGATTACAGAGATATTCCCGCATTTTCATGACCATCTaGGACCTCAGCCGCAAGTTGTACTGCATCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLQRYSRIFMTI*DLSRKLYCIWK Trigger: CTTCCAGATGCAGTACAACTTGCGGCTGAGGTCGCAGATGGTCATGAAAATGCGGGAATATCTCTGTAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | TCTGCTCTACAAAGGACATCTCTATGTCAATCTGAGTaGACTCTGGCTGTCTATCCGGTCTTGAGCCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SALQRTSLCQSE*TLAVYPVLSLH Trigger: ATGAAGGCTCAAGACCGGATAGACAGCCAGAGTTCACTCAGATTGACATAGAGATGTCCTTTGTAGAGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS GCA 72 bp | ACATATTGCTTTGACAGTTCCTTGGGGCTTAGCCAGTaGATCCTGAAGGAATCTGAGCTCTGTGTTTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: TYCFDSSLGLSQ*ILKESELCVSE Trigger: TTCAGAAACACAGAGCTCAGATTCCTTCAGGATGCACTGGCTAAGCCCCAAGGAACTGTCAAAGCAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CAA 72 bp | TCCAACCATCAGAAGCTGCTTAAATTGCTGAGGACTTaGAGGGAGGGAATAAAACTTTCCAGGTTCCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SNHQKLLKLLRT*REGIKLSRFPG Trigger: TCCAGGGAACCTGGAAAGTTTTATTCCCTCCCTCAAAGTCCTCAGCAATTTAAGCAGCTTCTGATGGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | CCGAGCAACAAAGCTACTGAATTCTGGAATTCTTTGTaGACTCAACGCCAGATTTCTGGAAAGAGAACCCCA | + |
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Preference number: 6 (lower is better) Translates to: PSNKATEFWNSL*TQRQISGKRTP Trigger: TGGGGTTCTCTTTCCAGAAATCTGGCGTTGAGTTCACAAAGAATTCCAGAATTCAGTAGCTTTGTTGCTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | ACTCTCCACATGTGTTGGTCCGAGCAACAAAGCTACTaGATTCTGGAATTCTTTGTGAACTCAACGCCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TLHMCWSEQQSY*ILEFFVNSTPD Trigger: ATCTGGCGTTGAGTTCACAAAGAATTCCAGAATTCAGTAGCTTTGTTGCTCGGACCAACACATGTGGAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS GCA 72 bp | AGGAATACTGCAGCAAACCCTCAACTAAACGCTGAATaGCAGTCTGCTCTACAAAGGACATCTCTATGTCAA | + |
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Preference number: 6 (lower is better) Translates to: RNTAANPQLNAE*QSALQRTSLCQ Trigger: TTGACATAGAGATGTCCTTTGTAGAGCAGACTGGCATTCAGCGTTTAGTTGAGGGTTTGCTGCAGTATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS TCA 72 bp | TCAATGTCTTCCTTCCTTAAGTATTTCGCTCCGTCATaGACACATATTGCTTTGACAGTTCCTTGGGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: SMSSFLKYFAPS*THIALTVPWGL Trigger: TAAGCCCCAAGGAACTGTCAAAGCAATATGTGTTCATGACGGAGCGAAATACTTAAGGAAGGAAGACATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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| CDS CCA 72 bp | TTCCAGTCTTTCCTCCTCCATTATGAACTTAGCAAATaGCGAACTCCAGTTCTTCTTGGCATTCAGGAATAT | + |
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Preference number: 6 (lower is better) Translates to: FQSFLLHYELSK*RTPVLLGIQEY Trigger: ATATTCCTGAATGCCAAGAAGAACTGGAGTTCGCCATTTGCTAAGTTCATAATGGAGGAGGAAAGACTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035430.4 |
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