Pregenerated sensors for DAPK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034974Ensembl transcript IDs: ENSMUST00000047665.7, ENSMUST00000178422.9, ENSMUST00000218157.2, ENSMUST00000218227.2, ENSMUST00000219133.2, ENSMUST00000219850.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CTCTTCGGCGGCGTAGGAGAGCACCTATCGTGGGGTTaGTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LFGGVGEHLSWG*SLPPSLRGVGD Trigger: GTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCTCTCCTACGCCGCCGAAGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| 3UTR GCA 72 bp | AGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTaGGGGGCGTGGGAGACAGGCGACAGTACGTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: STYRGVARSHPP*GAWETGDSTWK Trigger: TTTCCACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| 3UTR CCA 72 bp | CGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTaGGAGACAGGCGACAGTACGTGGAAAGCAGCTTTA | + |
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Preference number: 3 (lower is better) Translates to: RGVARSHPPCGA*ETGDSTWKAAL Trigger: TAAAGCTGCTTTCCACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| 3UTR CCA 72 bp | CATAATCTCTTCGGCGGCGTAGGAGAGCACCTATCGTaGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTG | + |
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Preference number: 3 (lower is better) Translates to: HNLFGGVGEHLS*GCSLPPSLRGV Trigger: CACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCTCTCCTACGCCGCCGAAGAGATTATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | TGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACACGCGCTCCCGGCACTaGCGCCTGCCTCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: WGCSLPPSLRGVGDRRQYTRSRH*RLPRCS Trigger: GCTGCAGCGAGGCAGGCGCCAGTGCCGGGAGCGCGT...GTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CGTAGGAGAGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTACGCGCTCCCGGCACTaGCGCCTGCCTCGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RRRAPIVGLLAPTLPAGRTRSRH*RLPRCS Trigger: GCTGCAGCGAGGCAGGCGCCAGTGCCGGGAGCGCGT...ACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCTCTCCTACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | CGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGCCGCACTCAGCCTaGAGCCGTTCCTGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RGVARSHPPCGAWETGDSTPHSA*SRSCSS Trigger: GCTGGAGCAGGAACGGCTGCAGGCTGAGTGCGGCGT...ACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTGGTCTCGCCCAGGAATaGGGACGCTCCGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RGVARSHPPCGAWETGDSGLAQE*GRSAQE Trigger: CTCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACC...ACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTCCCGTGCCCTTCTGCTaGCACTTGCGCACGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: RGVARSHPPCGAWETGDSPVPFC*HLRTMA Trigger: TGCCATCGTGCGCAAGTGCCAGCAGAAGGGCACGGG...ACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | GGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGGTCTCGCCCAGGAATaGGGACGCTCCGCTCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GLLAPTLPAGRGRQATVRGLAQE*GRSAQE Trigger: CTCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACC...ACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACCCGTGCCCTTCTGCTaGCACTTGCGCACGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSWGCSLPPSLRGVGDRRPVPFC*HLRTMA Trigger: TGCCATCGTGCGCAAGTGCCAGCAGAAGGGCACGGG...TCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGTCAGCGTCTCCTGCTTaGTCTCGCCCAGGAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: PIVGLLAPTLPAGRGRQASASPA*SRPGMG Trigger: CCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGA...CGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| 3UTR CAA 72 bp | TCTCTTCGGCGGCGTAGGAGAGCACCTATCGTGGGGTaGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLRRRRRAPIVG*LAPTLPAGRGR Trigger: TCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCTCTCCTACGCCGCCGAAGAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | GTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGGATGCCCGTGCCCTTCTaGTGGCACTTGCGCACGATG | + |
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Preference number: 4 (lower is better) Translates to: VARSHPPCGAWETGDSTWMPVPF*WHLRTM Trigger: CATCGTGCGCAAGTGCCAGCAGAAGGGCACGGGCAT...CCACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | CCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGCATACTCCATGCCCGTaGCCTTCTGCTGGCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: PIVGLLAPTLPAGRGRQAHTPCP*PSAGTC Trigger: GCAAGTGCCAGCAGAAGGGCACGGGCATGGAGTATG...CGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | GGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTAGAAGCGCTCGAAGCTaGCGTAGCTCGTGTTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: GLLAPTLPAGRGRQATVRRSARS*RSSCCA Trigger: CGCGCAACACGAGCTACGCCAGCTTCGAGCGCTTCT...ACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | CCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGTTCGTCAGCGTCTCCTaGTTGGTCTCGCCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PIVGLLAPTLPAGRGRQAFVSVS*LVSPRN Trigger: ATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAA...CGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGAGTGTGCGATGCGCTTaGAGTGCAGGTAGTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: PIVGLLAPTLPAGRGRQASVRCA*SAGSGH Trigger: GTGTCCACTACCTGCACTCCAAGCGCATCGCACACT...CGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | TATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACCCTTCTGCTGGCACTTaGGCACGATGGCAAATTGGC | + |
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Preference number: 4 (lower is better) Translates to: YRGVARSHPPCGAWETGDPSAGT*ARWQIG Trigger: GCCAATTTGCCATCGTGCGCAAGTGCCAGCAGAAGG...GTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | TGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACTTCGTCAGCGTCTCCTaGTTGGTCTCGCCCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WGCSLPPSLRGVGDRRQYFVSVS*LVSPRN Trigger: ATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAA...GTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACGCACGATGGCAAATTaGCCACTGCCAAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: LSWGCSLPPSLRGVGDRRRTMAN*PLPSSS Trigger: AGAGGAGCTTGGCAGTGGCCAATTTGCCATCGTGCG...TCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | GGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGCGCACGATGGCAAATTaGCCACTGCCAAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: GCSLPPSLRGVGDRRQYVRTMAN*PLPSSS Trigger: AGAGGAGCTTGGCAGTGGCCAATTTGCCATCGTGCG...CACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGAGTTATGATGTTGGGGTaGCGGATCTCGCGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: LSWGCSLPPSLRGVGDRRVMMLG*RISRRM Trigger: CATCCTGCGCGAGATCCGCCACCCCAACATCATAAC...TCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | GTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTAGTTATGATGTTGGGGTaGCGGATCTCGCGCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: VGLLAPTLPAGRGRQATVVMMLG*RISRRM Trigger: CATCCTGCGCGAGATCCGCCACCCCAACATCATAAC...TACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | GTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTCATGCAGTGTTATaGTGTTGGGGTGGCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: VGLLAPTLPAGRGRQATVRHAVL*CWGGGS Trigger: AGATCCGCCACCCCAACATCATAACACTGCATGACG...TACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | TATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACTGCCAAAGATGTTCTTaGACTCGCTGCCAGCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: YRGVARSHPPCGAWETGDCQRCS*TRCQPR Trigger: TCGAGGCTGGCAGCGAGTTCAAGAACATCTTTGGCA...GTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | CCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGGTCATAGTTCACTGCTaGGATGTTCGTCAGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PIVGLLAPTLPAGRGRQAVIVHC*DVRQRL Trigger: GAGACGCTGACGAACATCTCAGCAGTGAACTATGAC...CGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | GGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGCTTCAGGTCAAAGTGTaGGATGCGCTTGGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GCSLPPSLRGVGDRRQYVLQVKV*DALGVQ Trigger: CTGCACTCCAAGCGCATCGCACACTTTGACCTGAAG...CACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | GTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGGACCTTGATCCAGGAATaGTCCAGGCTCTGTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: VARSHPPCGAWETGDSTWTLIQE*SRLCAM Trigger: CATCGCACAGAGCCTGGAGCATTCCTGGATCAAGGT...CCACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGAGCCTCCAAGCCAAGTaGCTCATAGTTCACGATCTC | + |
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Preference number: 4 (lower is better) Translates to: PIVGLLAPTLPAGRGRQASLQAK*LIVHDL Trigger: GAGATCGTGAACTATGAGCCACTTGGCTTGGAGGCT...CGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | CGTAGGAGAGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTCGTCATGCAGTGTTATaGTGTTGGGGTGGCGGATCT | + |
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Preference number: 4 (lower is better) Translates to: RRRAPIVGLLAPTLPAGRRHAVL*CWGGGS Trigger: AGATCCGCCACCCCAACATCATAACACTGCATGACG...ACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCTCTCCTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | GTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGGGCTCGCTGGTGCTGCTaGAGTATTCCTCATCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: VARSHPPCGAWETGDSTWARWCC*SIPHQS Trigger: ACTTTGATGAGGAATACTTCAGCAGCACCAGCGAGC...CCACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | AGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAACCTTGATCCAGGAATaGTCCAGGCTCTGTGCGATG | + |
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Preference number: 4 (lower is better) Translates to: STYRGVARSHPPCGAWETTLIQE*SRLCAM Trigger: CATCGCACAGAGCCTGGAGCATTCCTGGATCAAGGT...TGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | GGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTAGCCTCCAAGCCAAGTaGCTCATAGTTCACGATCTC | + |
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Preference number: 4 (lower is better) Translates to: GLLAPTLPAGRGRQATVRSLQAK*LIVHDL Trigger: GAGATCGTGAACTATGAGCCACTTGGCTTGGAGGCT...ACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | AGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACACGTCTAGGATTTGTTTaGGGAACTGCGTGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: STYRGVARSHPPCGAWETRLGFV*GTAWPH Trigger: ATGAGGCCACGCAGTTCCTCAAACAAATCCTAGACG...TGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | AGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGCTCGCTGGTGCTGCTaGAGTATTCCTCATCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: STYRGVARSHPPCGAWETARWCC*SIPHQS Trigger: ACTTTGATGAGGAATACTTCAGCAGCACCAGCGAGC...TGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | GGGAGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGTGGCTGCATACTCCATaGCCGTGCCCTTCTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRQATVRGKQLYSGGGSGWLHTP*PCPSAG Trigger: GCCAGCAGAAGGGCACGGGCATGGAGTATGCAGCCA...CCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | AGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAATTTGTTTGAGGAACTaGGTGGCCTCATCCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: STYRGVARSHPPCGAWETICLRN*VASSSV Trigger: GACGGAGGATGAGGCCACGCAGTTCCTCAAACAAAT...TGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | AGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGTCTACCGCGCCGGCTGGATaGCAGGCGCCGCTTCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RQATVRGKQLYSGGGSGSTAPAG*QAPLLD Trigger: ATCAAGAAGCGGCGCCTGCCATCCAGCCGGCGCGGT...AGACCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | GACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGTCTGATGCCCGTGCCCTTCTaGTGGCACTTGCGCACGATG | + |
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Preference number: 4 (lower is better) Translates to: DRRQYVESSFILGVGRGLMPVPF*WHLRTM Trigger: CATCGTGCGCAAGTGCCAGCAGAAGGGCACGGGCAT...CAGACCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGGGTGACACCACCCTTGGTGTGTGGTGTGGCAGAGCCATAATCTCTTCGACGCCGCACTCAGCCTaGAGCCGTTCCTGCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TVGDTTLGVWCGRAIISSTPHSA*SRSCSS Trigger: GCTGGAGCAGGAACGGCTGCAGGCTGAGTGCGGCGT...CGAAGAGATTATGGCTCTGCCACACCACACACCAAGGGTGGTGTCACCCACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | GACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGTCTGAGAAGCGCTCGAAGCTaGCGTAGCTCGTGTTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: DRRQYVESSFILGVGRGLRSARS*RSSCCA Trigger: CGCGCAACACGAGCTACGCCAGCTTCGAGCGCTTCT...CAGACCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | CGTGGGAGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGAGTGTGCGATGCGCTTaGAGTGCAGGTAGTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: RGRQATVRGKQLYSGGGSSVRCA*SAGSGH Trigger: GTGTCCACTACCTGCACTCCAAGCGCATCGCACACT...CGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCTCCCACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CCA 90 bp | ACTGTGGGTGACACCACCCTTGGTGTGTGGTGTGGCAGAGCCATAATCTCTTCGTCAGCGTCTCCTGCTTaGTCTCGCCCAGGAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: TVGDTTLGVWCGRAIISSSASPA*SRPGMG Trigger: CCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGA...CGAAGAGATTATGGCTCTGCCACACCACACACCAAGGGTGGTGTCACCCACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | GGGAGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGATTTGTTTGAGGAACTaGGTGGCCTCATCCTCCGTC | + |
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Preference number: 4 (lower is better) Translates to: GRQATVRGKQLYSGGGSGICLRN*VASSSV Trigger: GACGGAGGATGAGGCCACGCAGTTCCTCAAACAAAT...CCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | AGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGTCTCGTCTAGGATTTGTTTaGGGAACTGCGTGGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: RQATVRGKQLYSGGGSGSRLGFV*GTAWPH Trigger: ATGAGGCCACGCAGTTCCTCAAACAAATCCTAGACG...AGACCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR GCA 90 bp | ACTGTGGGTGACACCACCCTTGGTGTGTGGTGTGGCAGAGCCATAATCTCTTCGCTTCAGGTCAAAGTGTaGGATGCGCTTGGAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TVGDTTLGVWCGRAIISSLQVKV*DALGVQ Trigger: CTGCACTCCAAGCGCATCGCACACTTTGACCTGAAG...CGAAGAGATTATGGCTCTGCCACACCACACACCAAGGGTGGTGTCACCCACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR TCA 90 bp | ACTGTGGGTGACACCACCCTTGGTGTGTGGTGTGGCAGAGCCATAATCTCTTCGGTCATAGTTCACTGCTaGGATGTTCGTCAGCGTCTC | + |
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Preference number: 4 (lower is better) Translates to: TVGDTTLGVWCGRAIISSVIVHC*DVRQRL Trigger: GAGACGCTGACGAACATCTCAGCAGTGAACTATGAC...CGAAGAGATTATGGCTCTGCCACACCACACACCAAGGGTGGTGTCACCCACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS GCA 90 bp | CCCCGGCACCCAACAGCGCCGCCCGCGCCTCCTCCTGCGCGCGCGTaGGCAGAGCCTCGGTGCGCCCCAGCTCCGTGCGCAGGCGTCGCA | + |
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Preference number: 5 (lower is better) Translates to: PRHPTAPPAPPPARA*AEPRCAPAPCAGVA Trigger: TGCGACGCCTGCGCACGGAGCTGGGGCGCACCGAGGCTCTGCGCACGCGCGCGCAGGAGGAGGCGCGGGCGGCGCTGTTGGGTGCCGGGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS GCA 90 bp | GCGCGCAGCGCACACACGCGCTCCCGGCACTGGCGCCTGCCTCGCTaGAGCTCGCGCAGCCCCTGCTCTGCCGCCGCCACGTCCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ARSAHTRSRHWRLPR*SSRSPCSAAATSSS Trigger: GCTGGAGGACGTGGCGGCGGCAGAGCAGGGGCTGCGCGAGCTGCAGCGAGGCAGGCGCCAGTGCCGGGAGCGCGTGTGTGCGCTGCGCGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS CCA 90 bp | GAGGCTGTACTCGCGCAGGCGCGCGGCGCGCAGCCGCCGTCGCTCTaGCTTCCGGGCGCCGTCCTCGCGCCTGCGCACCTTGATCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: EAVLAQARGAQPPSL*LPGAVLAPAHLDPG Trigger: TCCTGGATCAAGGTGCGCAGGCGCGAGGACGGCGCCCGGAAGCCAGAGCGACGGCGGCTGCGCGCCGCGCGCCTGCGCGAGTACAGCCTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218227.2 ENSMUST00000219850.2 |
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| CDS TCA 90 bp | CGAAGCTGGCGTAGCTCGTGTTGCGCGGCATGCTCGAGTGGGACTTaGGGCTGTACTCGCGCAGGCGCGCGGCGCGCAGCCGCCGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: RSWRSSCCAACSSGT*GCTRAGARRAAAVA Trigger: AGCGACGGCGGCTGCGCGCCGCGCGCCTGCGCGAGTACAGCCTCAAGTCCCACTCGAGCATGCCGCGCAACACGAGCTACGCCAGCTTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218227.2 ENSMUST00000219850.2 |
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| CDS TCA 90 bp | CTCGCGCAGCCCCTGCTCTGCCGCCGCCACGTCCTCCAGCACGCGTaGGAAGCGCTCGAAGCTGGCGTAGCTCGTGTTGCGCGGCATGCT | + |
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Preference number: 5 (lower is better) Translates to: LAQPLLCRRHVLQHA*EALEAGVARVARHA Trigger: AGCATGCCGCGCAACACGAGCTACGCCAGCTTCGAGCGCTTCTCACGCGTGCTGGAGGACGTGGCGGCGGCAGAGCAGGGGCTGCGCGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS-3UTR CAA 90 bp | CGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTGTCAGCGTCTCCTGCTaGGTCTCGCCCAGGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: RGVARSHPPCGAWETGDSVSVSC*VSPRNG Trigger: CCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGAC...ACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS TCA 90 bp | GCCGTCGCTCTGGCTTCCGGGCGCCGTCCTCGCGCCTGCGCACCTTaGTCCAGGAATGCTCCAGGCTCTGTGCGATGGTCATCCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AVALASGRRPRACAP*SRNAPGSVRWSSSS Trigger: AGAGGAGGATGACCATCGCACAGAGCCTGGAGCATTCCTGGATCAAGGTGCGCAGGCGCGAGGACGGCGCCCGGAAGCCAGAGCGACGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218227.2 ENSMUST00000219850.2 |
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| CDS-3UTR CAA 90 bp | GGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGCTCCTCTTGGGGTCTTaGACCAGCAGCCTGCGGATG | + |
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Preference number: 5 (lower is better) Translates to: GCSLPPSLRGVGDRRQYVLLLGS*TSSLRM Trigger: CATCCGCAGGCTGCTGGTCAAAGACCCCAAGAGGAG...CACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CAA 90 bp | GGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTGGGCTGGCTGCGTGCTaGTCCAGCAACATGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: GLLAPTLPAGRGRQATVRGLAAC*SSNMMF Trigger: GAACATCATGTTGCTGGACAAGCACGCAGCCAGCCC...ACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CAA 90 bp | GGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACAGGCGACAGTACGTATGGTCATCCTCCTCTaGGGGTCTTTGACCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLLAPTLPAGRGRQATVRMVILL*GSLTSS Trigger: GCTGCTGGTCAAAGACCCCAAGAGGAGGATGACCAT...ACGTACTGTCGCCTGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CAA 90 bp | AGCACCTATCGTGGGGTTGCTCGCTCCCACCCTCCCTGCGGGGCGTGGGAGACACCGTCTAGGATTTGTTaGAGGAACTGCGTGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: STYRGVARSHPPCGAWETPSRIC*RNCVAS Trigger: TGAGGCCACGCAGTTCCTCAAACAAATCCTAGACGG...TGTCTCCCACGCCCCGCAGGGAGGGTGGGAGCGAGCAACCCCACGATAGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS GCA 90 bp | GGTGTGCCAAAGATGTTCTTGAACTCGCTGCCAGCCTCGATCCTGTaGGCGATGCCAAAGTCGATGAGCTTAATGCGGGGGCTGGCTGCG | + |
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Preference number: 5 (lower is better) Translates to: GVPKMFLNSLPASIL*AMPKSMSLMRGLAA Trigger: CGCAGCCAGCCCCCGCATTAAGCTCATCGACTTTGGCATCGCGCACAGGATCGAGGCTGGCAGCGAGTTCAAGAACATCTTTGGCACACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS-3UTR CAA 90 bp | GCGTGGGAGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGCTGGCTGCGTGCTaGTCCAGCAACATGATGTTC | + |
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Preference number: 5 (lower is better) Translates to: AWETGDSTWKAALFWGWVGLAAC*SSNMMF Trigger: GAACATCATGTTGCTGGACAAGCACGCAGCCAGCCC...GACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCTCCCACGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS-3UTR CAA 90 bp | GGGAGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGATGGTCATCCTCCTCTaGGGGTCTTTGACCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: GRQATVRGKQLYSGGGSGMVILL*GSLTSS Trigger: GCTGCTGGTCAAAGACCCCAAGAGGAGGATGACCAT...CCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS TCA 90 bp | TCACGATCTCGGGGGCGACAAACTCGGGTGTGCCAAAGATGTTCTTaGACTCGCTGCCAGCCTCGATCCTGTGCGCGATGCCAAAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SRSRGRQTRVCQRCS*TRCQPRSCARCQSR Trigger: TCGACTTTGGCATCGCGCACAGGATCGAGGCTGGCAGCGAGTTCAAGAACATCTTTGGCACACCCGAGTTTGTCGCCCCCGAGATCGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CCA 90 bp | CAAAGTCATAGTTCACTGCTGAGATGTTCGTCAGCGTCTCCTGCTTaGTCTCGCCCAGGAATGGGGACGCTCCGCTCAGGAGGATGTAGG | + |
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Preference number: 5 (lower is better) Translates to: QSHSSLLRCSSASPA*SRPGMGTLRSGGCR Trigger: CCTACATCCTCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAACATCTCAGCAGTGAACTATGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CCA 90 bp | CAAAGTCATAGTTCACTGCTGAGATGTTCGTCAGCGTCTCCTGCTTaGTCTCGCCCAGGAATGGGGACGCTCCGCTCAGGCACATGTCAG | + |
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Preference number: 5 (lower is better) Translates to: QSHSSLLRCSSASPA*SRPGMGTLRSGTCQ Trigger: CTGACATGTGCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAACATCTCAGCAGTGAACTATGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218227.2 |
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| CDS-3UTR CAA 90 bp | AGACAGGCGACAGTACGTGGAAAGCAGCTTTATTCTGGGGGTGGGTCGGGGTCTCCGTCTAGGATTTGTTaGAGGAACTGCGTGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RQATVRGKQLYSGGGSGSPSRIC*RNCVAS Trigger: TGAGGCCACGCAGTTCCTCAAACAAATCCTAGACGG...AGACCCCGACCCACCCCCAGAATAAAGCTGCTTTCCACGTACTGTCGCCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 |
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| CDS GCA 72 bp | CGCGCGTGCGCAGAGCCTCGGTGCGCCCCAGCTCCGTaGGCAGGCGTCGCAGGTCGCGCCCTAGCCCTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RACAEPRCAPAP*AGVAGRALALR Trigger: GCGCAGGGCTAGGGCGCGACCTGCGACGCCTGCGCACGGAGCTGGGGCGCACCGAGGCTCTGCGCACGCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS GCA 72 bp | GCGCCTCCTCCTGCGCGCGCGTGCGCAGAGCCTCGGTaGGCCCCAGCTCCGTGCGCAGGCGTCGCAGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: APPPARACAEPR*APAPCAGVAGR Trigger: GCGACCTGCGACGCCTGCGCACGGAGCTGGGGCGCACCGAGGCTCTGCGCACGCGCGCGCAGGAGGAGGCGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS GCA 72 bp | CCAACAGCGCCGCCCGCGCCTCCTCCTGCGCGCGCGTaGGCAGAGCCTCGGTGCGCCCCAGCTCCGTGCGCA | + |
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Preference number: 6 (lower is better) Translates to: PTAPPAPPPARA*AEPRCAPAPCA Trigger: TGCGCACGGAGCTGGGGCGCACCGAGGCTCTGCGCACGCGCGCGCAGGAGGAGGCGCGGGCGGCGCTGTTGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS GCA 72 bp | GCACACACGCGCTCCCGGCACTGGCGCCTGCCTCGCTaGAGCTCGCGCAGCCCCTGCTCTGCCGCCGCCACG | + |
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Preference number: 6 (lower is better) Translates to: AHTRSRHWRLPR*SSRSPCSAAAT Trigger: CGTGGCGGCGGCAGAGCAGGGGCTGCGCGAGCTGCAGCGAGGCAGGCGCCAGTGCCGGGAGCGCGTGTGTGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS TCA 72 bp | CGTAGCTCGTGTTGCGCGGCATGCTCGAGTGGGACTTaGGGCTGTACTCGCGCAGGCGCGCGGCGCGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RSSCCAACSSGT*GCTRAGARRAA Trigger: GGCTGCGCGCCGCGCGCCTGCGCGAGTACAGCCTCAAGTCCCACTCGAGCATGCCGCGCAACACGAGCTACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218227.2 ENSMUST00000219850.2 |
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| CDS CAA 90 bp | CGCCGTCGCTCTGGCTTCCGGGCGCCGTCCTCGCGCCTGCGCACCTaGATCCAGGAATGCTCCAGGCTCTGTGCGATGGTCATCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRRSGFRAPSSRLRT*IQECSRLCAMVILL Trigger: GAGGAGGATGACCATCGCACAGAGCCTGGAGCATTCCTGGATCAAGGTGCGCAGGCGCGAGGACGGCGCCCGGAAGCCAGAGCGACGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218227.2 ENSMUST00000219850.2 |
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| CDS TCA 72 bp | CTGGCTTCCGGGCGCCGTCCTCGCGCCTGCGCACCTTaGTCCAGGAATGCTCCAGGCTCTGTGCGATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: LASGRRPRACAP*SRNAPGSVRWS Trigger: TGACCATCGCACAGAGCCTGGAGCATTCCTGGATCAAGGTGCGCAGGCGCGAGGACGGCGCCCGGAAGCCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218227.2 ENSMUST00000219850.2 |
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| CDS CCA 72 bp | CCACGTCCTCCAGCACGCGTGAGAAGCGCTCGAAGCTaGCGTAGCTCGTGTTGCGCGGCATGCTCGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PRPPARVRSARS*RSSCCAACSSG Trigger: CCCACTCGAGCATGCCGCGCAACACGAGCTACGCCAGCTTCGAGCGCTTCTCACGCGTGCTGGAGGACGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219850.2 |
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| CDS CCA 72 bp | GTTCGTCAGCGTCTCCTGCTTGGTCTCGCCCAGGAATaGGGACGCTCCGCTCAGGCACATGTCAGCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VRQRLLLGLAQE*GRSAQAHVSLQ Trigger: TTGGAGGCTGACATGTGCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218227.2 |
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| CDS TCA 72 bp | CGGGGGCGACAAACTCGGGTGTGCCAAAGATGTTCTTaGACTCGCTGCCAGCCTCGATCCTGTGCGCGATGC | + |
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Preference number: 6 (lower is better) Translates to: RGRQTRVCQRCS*TRCQPRSCARC Trigger: GCATCGCGCACAGGATCGAGGCTGGCAGCGAGTTCAAGAACATCTTTGGCACACCCGAGTTTGTCGCCCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CCA 72 bp | CCATGCCCGTGCCCTTCTGCTGGCACTTGCGCACGATaGCAAATTGGCCACTGCCAAGCTCCTCTCCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: PCPCPSAGTCAR*QIGHCQAPLPS Trigger: AGATGGGAGAGGAGCTTGGCAGTGGCCAATTTGCCATCGTGCGCAAGTGCCAGCAGAAGGGCACGGGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CCA 72 bp | GTTCGTCAGCGTCTCCTGCTTGGTCTCGCCCAGGAATaGGGACGCTCCGCTCAGGAGGATGTAGGTGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: VRQRLLLGLAQE*GRSAQEDVGDD Trigger: GTCATCACCTACATCCTCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CCA 72 bp | AGTTCACTGCTGAGATGTTCGTCAGCGTCTCCTGCTTaGTCTCGCCCAGGAATGGGGACGCTCCGCTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLRCSSASPA*SRPGMGTLRSG Trigger: GCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAACATCTCAGCAGTGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218227.2 |
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| CDS CCA 72 bp | AGTTCACTGCTGAGATGTTCGTCAGCGTCTCCTGCTTaGTCTCGCCCAGGAATGGGGACGCTCCGCTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSLLRCSSASPA*SRPGMGTLRSG Trigger: TCCTGAGCGGAGCGTCCCCATTCCTGGGCGAGACCAAGCAGGAGACGCTGACGAACATCTCAGCAGTGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CAA 72 bp | TCGGGGGCGACAAACTCGGGTGTGCCAAAGATGTTCTaGAACTCGCTGCCAGCCTCGATCCTGTGCGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: SGATNSGVPKMF*NSLPASILCAM Trigger: CATCGCGCACAGGATCGAGGCTGGCAGCGAGTTCAAGAACATCTTTGGCACACCCGAGTTTGTCGCCCCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CAA 90 bp | TTCACGATCTCGGGGGCGACAAACTCGGGTGTGCCAAAGATGTTCTaGAACTCGCTGCCAGCCTCGATCCTGTGCGCGATGCCAAAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: FTISGATNSGVPKMF*NSLPASILCAMPKS Trigger: CGACTTTGGCATCGCGCACAGGATCGAGGCTGGCAGCGAGTTCAAGAACATCTTTGGCACACCCGAGTTTGTCGCCCCCGAGATCGTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS TCA 72 bp | TTGTTTGAGGAACTGCGTGGCCTCATCCTCCGTCAATaGCTCCTTCTCGGCCAGGAAGTCGAAAAGCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFEELRGLILRQ*LLLGQEVEKLA Trigger: GGCGAGCTTTTCGACTTCCTGGCCGAGAAGGAGTCATTGACGGAGGATGAGGCCACGCAGTTCCTCAAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS GCA 72 bp | AAGATGTTCTTGAACTCGCTGCCAGCCTCGATCCTGTaGGCGATGCCAAAGTCGATGAGCTTAATGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KMFLNSLPASIL*AMPKSMSLMRG Trigger: CCCCCGCATTAAGCTCATCGACTTTGGCATCGCGCACAGGATCGAGGCTGGCAGCGAGTTCAAGAACATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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| CDS CAA 72 bp | CCGGACACCAGCTCCAGGATCAGCACCACATCTGTCTaGTTCTCGAACACGTCATGCAGTGTTATGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PDTSSRISTTSV*FSNTSCSVMML Trigger: CAACATCATAACACTGCATGACGTGTTCGAGAACAAGACAGATGTGGTGCTGATCCTGGAGCTGGTGTCCGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000047665.7 ENSMUST00000178422.9 ENSMUST00000218157.2 ENSMUST00000219133.2 ENSMUST00000219850.2 |
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