Pregenerated sensors for DAPK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032380Ensembl transcript IDs: ENSMUST00000034944.9, ENSMUST00000132987.8, ENSMUST00000238682.2
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCACCGGGAGACAGCCACAACTCCCAGGGTCTCCGGAAAGTTCTaGGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACA | + |
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Preference number: 1 (lower is better) Translates to: PHRETATTPRVSGKF*VLQTPLSCKVLRNT Trigger: TGTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTCAGAACTTTCCGGAGACCCTGGGAGTTGTGGCTGTCTCCCGGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR TCA 90 bp | TCCTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTCTGGATCCTaGTGTCAAGCAGGGTCCGGGAGCTTGCACAGCAGGGCGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SSLLQSAQEHRMSGS*CQAGSGSLHSRAAG Trigger: TCCTGCCGCCCTGCTGTGCAAGCTCCCGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR CCA 90 bp | TGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTCTaGATCCTGATGTCAAGCAGGGTCCGGGAGCTTGCACAGCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: CRLLSLAKCSGTQNV*ILMSSRVRELAQQG Trigger: GCCCTGCTGTGCAAGCTCCCGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR CCA 90 bp | TCGCTTGTCCTCAGATGTACCTTCTTCATCAGGGAGCGAGTGAGGTaGTTGCACAAGGAGACGATGCTGAAGGACAGCTTCCACCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SLVLRCTFFIRERVR*LHKETMLKDSFHRL Trigger: CAGGCGGTGGAAGCTGTCCTTCAGCATCGTCTCCTTGTGCAACCACCTCACTCGCTCCCTGATGAAGAAGGTACATCTGAGGACAAGCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR GCA 90 bp | GGGAGACAGCCACAACTCCCAGGGTCTCCGGAAAGTTCTGAGTCCTaGAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTC | + |
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Preference number: 1 (lower is better) Translates to: GRQPQLPGSPESSES*RLLSLAKCSGTQNV Trigger: GACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTCAGAACTTTCCGGAGACCCTGGGAGTTGTGGCTGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR GCA 90 bp | AGACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATaGTGGAGGTTCCCCACCGGGAGACAGCCACAACTCCCAGGGTCT | + |
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Preference number: 1 (lower is better) Translates to: RQMKASFLENYKPEE*WRFPTGRQPQLPGS Trigger: AGACCCTGGGAGTTGTGGCTGTCTCCCGGTGGGGAACCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR GCA 90 bp | AAGGAGACGATGCTGAAGGACAGCTTCCACCGCCTGCGGACATACTaGTTCTTAAAATTCTCCAGGTTGACCACGGACTCTCTGCGTACC | + |
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Preference number: 1 (lower is better) Translates to: KETMLKDSFHRLRTY*FLKFSRLTTDSLRT Trigger: GGTACGCAGAGAGTCCGTGGTCAACCTGGAGAATTTTAAGAAGCAGTATGTCCGCAGGCGGTGGAAGCTGTCCTTCAGCATCGTCTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR TCA 90 bp | TCACAGGATTGGTCCCTCCCTCTAGAGAGTCTTTACTCACGAGCTTaGCAGGGTAGGCTCTGTGAGGAAAGCTGCCTAAATCTGACCTTT | + |
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Preference number: 1 (lower is better) Translates to: SQDWSLPLESLYSRA*QGRLCEESCLNLTF Trigger: AAAGGTCAGATTTAGGCAGCTTTCCTCACAGAGCCTACCCTGTCAAGCTCGTGAGTAAAGACTCTCTAGAGGGAGGGACCAATCCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR TCA 90 bp | TCCTTAGTCCACACCCAATTCCAGCTTCTGAGGTTAGCAGACAGATaGAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SLVHTQFQLLRLADR*KPVFWRTTSQRNAG Trigger: TCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGTCTGCTAACCTCAGAAGCTGGAATTGGGTGTGGACTAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR GCA 90 bp | TCCCCACCGGGAGACAGCCACAACTCCCAGGGTCTCCGGAAAGTTCTGAGTCCTCAGGGTCCGGGAGCTTaGACAGCAGGGCGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SPPGDSHNSQGLRKVLSPQGPGA*TAGRQE Trigger: TTCCTGCCGCCCTGCTGTGCAAGCTCCCGGACCCTG...AGGACTCAGAACTTTCCGGAGACCCTGGGAGTTGTGGCTGTCTCCCGGTGGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR TCA 90 bp | ATAGCTTGCTGGGTGTCCACCGGCGTGATCCAGGGATGTCTGAGAGCCTCTTGGCAAGAAGCTTCCGAATaGAGTCCTTGGCCAGCTCGC | + |
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Preference number: 2 (lower is better) Translates to: IACWVSTGVIQGCLRASWQEASE*SPWPAR Trigger: GCGAGCTGGCCAAGGACTTCATTCGGAAGCTTCTTG...CCAAGAGGCTCTCAGACATCCCTGGATCACGCCGGTGGACACCCAGCAAGCTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGCGTACCATAGCTTGCTGGGTGTCCACCGGCGTGATCCAGGGATGTCTGAGGGCCTCCAGTCCCAGTaGCTCATAGTTCACGATTTC | + |
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Preference number: 2 (lower is better) Translates to: SAYHSLLGVHRRDPGMSEGLQSQ*LIVHDF Trigger: GAAATCGTGAACTATGAGCCACTGGGACTGGAGGCC...CTCAGACATCCCTGGATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR CCA 90 bp | CGGAAAGTTCTGAGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACGAACTTGGACCTCCCTaGCAGCCACTGCAAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RKVLSPADSSLLQSAQEHELGPP*QPLQAG Trigger: CCCAGCTTGCAGTGGCTGCCAGGGAGGTCCAAGTTC...GTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTCAGAACTTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGAACTACAAGCCAGAGGAATGCTGGAGGTTCCCCACCGGGAGACAGCCACACTCTCTCTTGCAAAGTaGTCAGGAACACAGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: GELQARGMLEVPHRETATLSLAK*SGTQNV Trigger: GACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAG...TGTGGCTGTCTCCCGGTGGGGAACCTCCAGCATTCCTCTGGCTTGTAGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR TCA 90 bp | ACGGACTCTCTGCGTACCATAGCTTGCTGGGTGTCCACCGGCGTGATCCAGGGACAAAGTCAATCAGCTTaGTGTGTGGAATTGGGATAT | + |
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Preference number: 2 (lower is better) Translates to: TDSLRTIACWVSTGVIQGQSQSA*CVELGY Trigger: ATATCCCAATTCCACACATCAAGCTGATTGACTTTG...TCCCTGGATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTCTTCATCAGGGAGCGAGTGAGGTGGTTGCACAAGGAGACGATGCTGAAGCCATCTTCTATTTCGTaGGCCAGGCCAAAGTCAATC | + |
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Preference number: 2 (lower is better) Translates to: TFFIRERVRWLHKETMLKPSSIS*ARPKSI Trigger: GATTGACTTTGGCCTGGCTCACGAAATAGAAGATGG...CTTCAGCATCGTCTCCTTGTGCAACCACCTCACTCGCTCCCTGATGAAGAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCGCTTGTCCTCAGATGTACCTTCTTCATCAGGGAGCGAGTGAGGTGGTTCGTAACTCACAGCAGTaGTATTTGCCAGGGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VLACPQMYLLHQGASEVVRNSQQ*YLPGFL Trigger: AAGAAACCCTGGCAAATATCACTGCTGTGAGTTACG...AACCACCTCACTCGCTCCCTGATGAAGAAGGTACATCTGAGGACAAGCGAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGACCACGGACTCTCTGCGTACCATAGCTTGCTGGGTGTCCACCGGCGTGATAATCAGCTTGATGTGTaGAATTGGGATATTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: VDHGLSAYHSLLGVHRRDNQLDV*NWDILV Trigger: GACAAGAATATCCCAATTCCACACATCAAGCTGATT...ATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGTGGTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTTCTTCATCAGGGAGCGAGTGAGGTGGTTGCACAAGGAGACGATGCTGAAGCACAGCAGTGATATTTaGCAGGGTTTCTTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TFFIRERVRWLHKETMLKHSSDI*QGFLFC Trigger: ACAAAACAAGAAACCCTGGCAAATATCACTGCTGTG...CTTCAGCATCGTCTCCTTGTGCAACCACCTCACTCGCTCCCTGATGAAGAAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTTGAGATCCATTTCCTTAGTCCACACCCAATTCCAGCTTCTGAGGTTAGCGGAACACAGAATGTCTaGATCCTGATGTCAAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: LLEIHFLSPHPIPASEVSGTQNV*ILMSSR Trigger: CCTGCTTGACATCAGGATCCAGACATTCTGTGTTCC...GCTAACCTCAGAAGCTGGAATTGGGTGTGGACTAAGGAAATGGATCTCAAGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR CCA 90 bp | TCCATCTTCTATTTCGTGAGCCAGGCCAAAGTCAATCAGCTTGATGTGTGGAATCAACATGATGTTTTCTaGCTTTTATCAGGCCGGTTA | + |
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Preference number: 2 (lower is better) Translates to: SIFYFVSQAKVNQLDVWNQHDVF*LLSGRL Trigger: TAACCGGCCTGATAAAAGCCAGAAAACATCATGTTG...ATTCCACACATCAAGCTGATTGACTTTGGCCTGGCTCACGAAATAGAAGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR GCA 72 bp | TCCAGGTTGACCACGGACTCTCTGCGTACCATAGCTTaGTGGGTGTCCACCGGCGTGATCCAGGGATGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SRLTTDSLRTIA*WVSTGVIQGCL Trigger: CAGACATCCCTGGATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGTGGTCAACCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR CCA 72 bp | AGGTTGACCACGGACTCTCTGCGTACCATAGCTTGCTaGGTGTCCACCGGCGTGATCCAGGGATGTCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: RLTTDSLRTIAC*VSTGVIQGCLR Trigger: TCTCAGACATCCCTGGATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGTGGTCAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR-3UTR CAA 90 bp | GTTGACCACGGACTCTCTGCGTACCATAGCTTGCTGGGTGTCCACCGGCGTGATATGTCTGAGAGCCTCTaGGATGGTAAGCCGTTTCCG | + |
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Preference number: 3 (lower is better) Translates to: VDHGLSAYHSLLGVHRRDMSESL*DGKPFP Trigger: CGGAAACGGCTTACCATCCAAGAGGCTCTCAGACAT...ATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGTGGTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| 3UTR TCA 72 bp | TTGCAAAGTGCTCAGGAACACAGAATGTCTGGATCCTaGTGTCAAGCAGGGTCCGGGAGCTTGCACAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LQSAQEHRMSGS*CQAGSGSLHSR Trigger: CCTGCTGTGCAAGCTCCCGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCACTTTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR GCA 72 bp | CCACAACTCCCAGGGTCTCCGGAAAGTTCTGAGTCCTaGAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACA | + |
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Preference number: 3 (lower is better) Translates to: PQLPGSPESSES*RLLSLAKCSGT Trigger: TGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTCAGAACTTTCCGGAGACCCTGGGAGTTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR GCA 72 bp | AAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATaGTGGAGGTTCCCCACCGGGAGACAGCCACAACTC | + |
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Preference number: 3 (lower is better) Translates to: KASFLENYKPEE*WRFPTGRQPQL Trigger: GAGTTGTGGCTGTCTCCCGGTGGGGAACCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR CCA 72 bp | CTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTCTaGATCCTGATGTCAAGCAGGGTCCGGGAGCTTGCA | + |
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Preference number: 3 (lower is better) Translates to: LSLAKCSGTQNV*ILMSSRVRELA Trigger: TGCAAGCTCCCGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR CAA 90 bp | AAAAAGATACTCCTTGAGATCCATTTCCTTAGTCCACACCCAATTCCAGCTTCTCAGGGCGGCAGGAACTaGGACCTCCCTGGCAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: KKILLEIHFLSPHPIPASQGGRN*DLPGSH Trigger: GTGGCTGCCAGGGAGGTCCAAGTTCCTGCCGCCCTG...AGAAGCTGGAATTGGGTGTGGACTAAGGAAATGGATCTCAAGGAGTATCTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR TCA 72 bp | TGGTCCCTCCCTCTAGAGAGTCTTTACTCACGAGCTTaGCAGGGTAGGCTCTGTGAGGAAAGCTGCCTAAAT | + |
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Preference number: 3 (lower is better) Translates to: WSLPLESLYSRA*QGRLCEESCLN Trigger: ATTTAGGCAGCTTTCCTCACAGAGCCTACCCTGTCAAGCTCGTGAGTAAAGACTCTCTAGAGGGAGGGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR-3UTR CAA 90 bp | ACCTTCTTCATCAGGGAGCGAGTGAGGTGGTTGCACAAGGAGACGATGCTGAAGCCAAAGTCAATCAGCTaGATGTGTGGAATTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: TFFIRERVRWLHKETMLKPKSIS*MCGIGI Trigger: TATCCCAATTCCACACATCAAGCTGATTGACTTTGG...CTTCAGCATCGTCTCCTTGTGCAACCACCTCACTCGCTCCCTGATGAAGAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| CDS-3UTR CCA 90 bp | AGGAACACAGAATGTCTGGATCCTGATGTCAAGCAGGGTCCGGGAGCTTGCACAACACGCCCCGACGGCTaGCCCGGCTCTGCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RNTECLDPDVKQGPGACTTRPDG*PGSASS Trigger: AGAAGAGGCAGAGCCGGGCCAGCCGTCGGGGCGTGT...TGTGCAAGCTCCCGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR CAA 72 bp | CTCCAGGTTGACCACGGACTCTCTGCGTACCATAGCTaGCTGGGTGTCCACCGGCGTGATCCAGGGATGTCT | + |
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Preference number: 4 (lower is better) Translates to: LQVDHGLSAYHS*LGVHRRDPGMS Trigger: AGACATCCCTGGATCACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGAGAGTCCGTGGTCAACCTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGGCGGCAGGAACTTGGACCTCCCTGGCAGCCACTGCAAGCTGGGCCACCATCTTCTATTTCGTaGGCCAGGCCAAAGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: TAGRQELGPPWQPLQAGPPSSIS*ARPKSI Trigger: GATTGACTTTGGCCTGGCTCACGAAATAGAAGATGG...TGGCCCAGCTTGCAGTGGCTGCCAGGGAGGTCCAAGTTCCTGCCGCCCTGCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | AGGTTCCCCACCGGGAGACAGCCACAACTCCCAGGGTCTCCGGAAAGTTCTGAGCAAGAAGCTTCCGAATaGAGTCCTTGGCCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RFPTGRQPQLPGSPESSEQEASE*SPWPAR Trigger: GCGAGCTGGCCAAGGACTTCATTCGGAAGCTTCTTG...CTCAGAACTTTCCGGAGACCCTGGGAGTTGTGGCTGTCTCCCGGTGGGGAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | TCCCCACCGGGAGACAGCCACAACTCCCAGGGTCTCCGGAAAGTTCTGAGTCCTACCCCATCCAGGATCTaGTTAATGAAGCTGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPPGDSHNSQGLRKVLSPTPSRI*LMKLVA Trigger: AGCCACCAGCTTCATTAAGCAGATCCTGGATGGGGT...AGGACTCAGAACTTTCCGGAGACCCTGGGAGTTGTGGCTGTCTCCCGGTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| 3UTR CAA 72 bp | GTCCACCGGCGTGATCCAGGGATGTCTGAGAGCCTCTaGGATGGTAAGCCGTTTCCGGGTCTCTTTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: VHRRDPGMSESL*DGKPFPGLFHK Trigger: CTTGTGAAAGAGACCCGGAAACGGCTTACCATCCAAGAGGCTCTCAGACATCCCTGGATCACGCCGGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| CDS-3UTR TCA 90 bp | CTTATGGATTCTGTTAAGTCACAGGATTGGTCCCTCCCTCTAGAGAGTCTTTACCTCCTCCTCCGGGGGTaGAGGGCTTTCCTCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LMDSVKSQDWSLPLESLYLLLRG*RAFLLA Trigger: CGCCAGGAGGAAAGCCCTTCACCCCCGGAGGAGGAG...GTAAAGACTCTCTAGAGGGAGGGACCAATCCTGTGACTTAACAGAATCCATAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | GGAGAACTACAAGCCAGAGGAATGCTGGAGGTTCCCCACCGGGAGACAGCCACACGCCTGCGGACATACTaGTTCTTAAAATTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GELQARGMLEVPHRETATRLRTY*FLKFSR Trigger: CCTGGAGAATTTTAAGAAGCAGTATGTCCGCAGGCG...TGTGGCTGTCTCCCGGTGGGGAACCTCCAGCATTCCTCTGGCTTGTAGTTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | ACAGCAGGGCGGCAGGAACTTGGACCTCCCTGGCAGCCACTGCAAGCTGGGCCAATAGTTCACGATTTCTaGAGCAACAAATTCAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: TAGRQELGPPWQPLQAGPIVHDF*SNKFRC Trigger: ACACCTGAATTTGTTGCTCCAGAAATCGTGAACTAT...TGGCCCAGCTTGCAGTGGCTGCCAGGGAGGTCCAAGTTCCTGCCGCCCTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | AGACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATGCTGGAGGCTGCGTACCATAGCTTaGTGGGTGTCCACCGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: RQMKASFLENYKPEECWRLRTIA*WVSTGV Trigger: CACGCCGGTGGACACCCAGCAAGCTATGGTACGCAG...CCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | GAGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTCTGGTTCACGATGGCAAACTaGCCACTGCCCAGCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ESCRLLSLAKCSGTQNVWFTMAN*PLPSSS Trigger: AGAGGAGCTGGGCAGTGGCCAGTTTGCCATCGTGAA...CCAGACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | AGACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATGCTGGAGGCATACTCCAGCCCCGTaGTCTTCTCCCGGCACTTCT | + |
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Preference number: 4 (lower is better) Translates to: RQMKASFLENYKPEECWRHTPAP*SSPGTS Trigger: AGAAGTGCCGGGAGAAGAGCACGGGGCTGGAGTATG...CCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | CGGAAAGTTCTGAGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACGGCCTCCAGTCCCAGTaGCTCATAGTTCACGATTTC | + |
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Preference number: 4 (lower is better) Translates to: RKVLSPADSSLLQSAQEHGLQSQ*LIVHDF Trigger: GAAATCGTGAACTATGAGCCACTGGGACTGGAGGCC...GTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTCAGAACTTTCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | TGCAAAGTGCTCAGGAACACAGAATGTCTGGATCCTGATGTCAAGCAGGGTCCGTGTCTGAGAGCCTCTTaGATGGTAAGCCGTTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: CKVLRNTECLDPDVKQGPCLRAS*MVSRFR Trigger: CCGGAAACGGCTTACCATCCAAGAGGCTCTCAGACA...CGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCACTTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | CACCCAATTCCAGCTTCTGAGGTTAGCAGACAGATGAAAGCCAGTTTTCTGGAGCGTACCATAGCTTGCTaGGTGTCCACCGGCGTGATC | + |
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Preference number: 4 (lower is better) Translates to: HPIPASEVSRQMKASFLERTIAC*VSTGVI Trigger: GATCACGCCGGTGGACACCCAGCAAGCTATGGTACG...CTCCAGAAAACTGGCTTTCATCTGTCTGCTAACCTCAGAAGCTGGAATTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | ACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATGCTGGAGGTTACACTAGCTCAAGGATaGGCACCACGTCGGTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: TDESQFSGELQARGMLEVTLAQG*APRRCG Trigger: ACCGCACCGACGTGGTGCTCATCCTTGAGCTAGTGT...AACCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | GTGCTCAGGAACACAGAATGTCTGGATCCTGATGTCAAGCAGGGTCCGGGAGCTAAGTCCTCCACCTTCTaGTGTTTGAACGTCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VLRNTECLDPDVKQGPGAKSSTF*CLNVSI Trigger: TATGGAGACGTTCAAACAGCAGAAGGTGGAGGACTT...AGCTCCCGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | GAGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTCTGGCTTAATGAACTTGGCTaGATACTCCAGCCCCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESCRLLSLAKCSGTQNVWLNELG*ILQPRA Trigger: AGCACGGGGCTGGAGTATGCAGCCAAGTTCATTAAG...CCAGACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | TTGCTGGGTGTCCACCGGCGTGATCCAGGGATGTCTGAGAGCCTCTTGGATGGTCTATCTTTCCTTTCTTaGCTTGAGATCAAAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGVHRRDPGMSESLLDGLSFLS*LEIKVS Trigger: GCTCACTTTGATCTCAAGGCAAGAAAGGAAAGATAG...ACCATCCAAGAGGCTCTCAGACATCCCTGGATCACGCCGGTGGACACCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| CDS-3UTR TCA 90 bp | GATTCTGTTAAGTCACAGGATTGGTCCCTCCCTCTAGAGAGTCTTTACTCACGATCATCAGGGAGCGAGTaGGGTGGTTGCACAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSVKSQDWSLPLESLYSRSSGSE*GGCTRR Trigger: TCTCCTTGTGCAACCACCTCACTCGCTCCCTGATGA...TCGTGAGTAAAGACTCTCTAGAGGGAGGGACCAATCCTGTGACTTAACAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | GAGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACAGAATGTCTGGCGTAACTCACAGCAGTaGTATTTGCCAGGGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESCRLLSLAKCSGTQNVWRNSQQ*YLPGFL Trigger: AAGAAACCCTGGCAAATATCACTGCTGTGAGTTACG...CCAGACATTCTGTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTTAGCAGACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAACGTCTCCATATTTaGGCTCCTCATCGAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVSRQMKASFLENYKPEERLHI*APHRGL Trigger: CAGGCCTCGATGAGGAGCCCAAATATGGAGACGTTC...CTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGTCTGCTAACCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | TCTGAGGTTAGCAGACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAAGGGCTTTCCTCCTaGCGATGTTCTCCTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEVSRQMKASFLENYKPEEGLSS*RCSPLC Trigger: ACACAGAGGAGAACATCGCCAGGAGGAAAGCCCTTC...CTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGTCTGCTAACCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | ACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATGCTGGAGGTTCCACCTTCTGCTGTTTaGACGTCTCCATATTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TDESQFSGELQARGMLEVPPSAV*TSPYLG Trigger: GCCCAAATATGGAGACGTTCAAACAGCAGAAGGTGG...AACCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | GTCCTCGCTTGTCCTCAGATGTACCTTCTTCATCAGGGAGCGAGTGAGGTGGTTTTTCCTTTCTTGCCTTaGGATCAAAGTGAGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: VLACPQMYLLHQGASEVVFPFLP*DQSEQF Trigger: AAATTGCTCACTTTGATCTCAAGGCAAGAAAGGAAA...AACCACCTCACTCGCTCCCTGATGAAGAAGGTACATCTGAGGACAAGCGAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000132987.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGATACTCCTTGAGATCCATTTCCTTAGTCCACACCCAATTCCAGCTTCTTGGCAAACTGGCCACTaGCCAGCTCCTCTCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: KKILLEIHFLSPHPIPASWQTGH*PAPLQY Trigger: ATATTGGAGAGGAGCTGGGCAGTGGCCAGTTTGCCA...AGAAGCTGGAATTGGGTGTGGACTAAGGAAATGGATCTCAAGGAGTATCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | GATTCTGTTAAGTCACAGGATTGGTCCCTCCCTCTAGAGAGTCTTTACTCACGACAAAGTCAATCAGCTTaGTGTGTGGAATTGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: DSVKSQDWSLPLESLYSRQSQSA*CVELGY Trigger: ATATCCCAATTCCACACATCAAGCTGATTGACTTTG...TCGTGAGTAAAGACTCTCTAGAGGGAGGGACCAATCCTGTGACTTAACAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR TCA 90 bp | AAAAAGATACTCCTTGAGATCCATTTCCTTAGTCCACACCCAATTCCAGCTTCTGCTCGCTTGTCTGGCTaGAGAATTCCTCATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKILLEIHFLSPHPIPASARLSG*RIPHQS Trigger: ACTTTGATGAGGAATTCTTCAGCCAGACAAGCGAGC...AGAAGCTGGAATTGGGTGTGGACTAAGGAAATGGATCTCAAGGAGTATCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR GCA 90 bp | CTTATGGATTCTGTTAAGTCACAGGATTGGTCCCTCCCTCTAGAGAGTCTTTACCACAGCAGTGATATTTaGCAGGGTTTCTTGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LMDSVKSQDWSLPLESLYHSSDI*QGFLFC Trigger: ACAAAACAAGAAACCCTGGCAAATATCACTGCTGTG...GTAAAGACTCTCTAGAGGGAGGGACCAATCCTGTGACTTAACAGAATCCATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | ACAGATGAAAGCCAGTTTTCTGGAGAACTACAAGCCAGAGGAATGCTGGAGGTTAATCAGCTTGATGTGTaGAATTGGGATATTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TDESQFSGELQARGMLEVNQLDV*NWDILV Trigger: GACAAGAATATCCCAATTCCACACATCAAGCTGATT...AACCTCCAGCATTCCTCTGGCTTGTAGTTCTCCAGAAAACTGGCTTTCATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CCA 90 bp | AAAAAGATACTCCTTGAGATCCATTTCCTTAGTCCACACCCAATTCCAGCTTCTCAACATGATGTTTTCTaGCTTGAGATCAAAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKILLEIHFLSPHPIPASQHDVF*LEIKVS Trigger: GCTCACTTTGATCTCAAGCCAGAAAACATCATGTTG...AGAAGCTGGAATTGGGTGTGGACTAAGGAAATGGATCTCAAGGAGTATCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS CCA 90 bp | TGGTCTAGCTTCCTGGCCACGCCTCCAAGGCTGGCCCCTGTGGCCTaGATGTCTTCTCTCAGGAGCTTCTTCAGGGACTCCACCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WSSFLATPPRLAPVA*MSSLRSFFRDSTLR Trigger: CCGCAAGGTGGAGTCCCTGAAGAAGCTCCTGAGAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 90 bp | GCAGATGGTCTAGCTTCCTGGCCACGCCTCCAAGGCTGGCCCCTGTaGCCTGGATGTCTTCTCTCAGGAGCTTCTTCAGGGACTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ADGLASWPRLQGWPL*PGCLLSGASSGTPP Trigger: AGGTGGAGTCCCTGAAGAAGCTCCTGAGAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAGACCATCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 90 bp | ACTGTGCCTGCAGATGGTCTAGCTTCCTGGCCACGCCTCCAAGGCTaGCCCCTGTGGCCTGGATGTCTTCTCTCAGGAGCTTCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TVPADGLASWPRLQG*PLWPGCLLSGASSG Trigger: CCCTGAAGAAGCTCCTGAGAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAGACCATCTGCAGGCACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 90 bp | GCTGCCTCAGAGTCTCAAACTGTGCCTGCAGATGGTCTAGCTTCCTaGCCACGCCTCCAAGGCTGGCCCCTGTGGCCTGGATGTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AASESQTVPADGLAS*PRLQGWPLWPGCLL Trigger: GAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAGACCATCTGCAGGCACAGTTTGAGACTCTGAGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS-3UTR CAA 90 bp | GGAGAACTACAAGCCAGAGGAATGCTGGAGGTTCCCCACCGGGAGACAGCCACATGCAGCGTGATGATGTaGGGGTGCAGCACCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GELQARGMLEVPHRETATCSVMM*GCSTCR Trigger: GCGGCAGGTGCTGCACCCCAACATCATCACGCTGCA...TGTGGCTGTCTCCCGGTGGGGAACCTCCAGCATTCCTCTGGCTTGTAGTTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS GCA 90 bp | TGGATGTCTGCTGAGAGCTGCTGCCTCAGAGTCTCAAACTGTGCCTaGAGATGGTCTAGCTTCCTGGCCACGCCTCCAAGGCTGGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WMSAESCCLRVSNCA*RWSSFLATPPRLAP Trigger: AGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAGACCATCTGCAGGCACAGTTTGAGACTCTGAGGCAGCAGCTCTCAGCAGACATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS-3UTR CAA 90 bp | GGAGAACTACAAGCCAGAGGAATGCTGGAGGTTCCCCACCGGGAGACAGCCACATCTGCGTACCATAGCTaGCTGGGTGTCCACCGGCGT | + |
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Preference number: 5 (lower is better) Translates to: GELQARGMLEVPHRETATSAYHS*LGVHRR Trigger: ACGCCGGTGGACACCCAGCAAGCTATGGTACGCAGA...TGTGGCTGTCTCCCGGTGGGGAACCTCCAGCATTCCTCTGGCTTGTAGTTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CAA 90 bp | AGGTTCCCCACCGGGAGACAGCCACAACTCCCAGGGTCTCCGGAAAGTTCTGAGGAGCGAGTGAGGTGGTaGCACAAGGAGACGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RFPTGRQPQLPGSPESSEERVRW*HKETML Trigger: CAGCATCGTCTCCTTGTGCAACCACCTCACTCGCTC...CTCAGAACTTTCCGGAGACCCTGGGAGTTGTGGCTGTCTCCCGGTGGGGAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS CCA 90 bp | GATAGGGACTCACTGGGGTCCCGGTGGAACATGAAGCCCAGGCTGTaGCTATCAGTGTTCTCACTCTCCAGCTGGAAGATGCCAACCAGT | + |
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Preference number: 5 (lower is better) Translates to: DRDSLGSRWNMKPRL*LSVFSLSSWKMPTS Trigger: ACTGGTTGGCATCTTCCAGCTGGAGAGTGAGAACACTGATAGCCACAGCCTGGGCTTCATGTTCCACCGGGACCCCAGTGAGTCCCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 90 bp | TGTGATCTGTTGAGCAGCTCCGATAGGGACTCACTGGGGTCCCGGTaGAACATGAAGCCCAGGCTGTGGCTATCAGTGTTCTCACTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CDLLSSSDRDSLGSR*NMKPRLWLSVFSLS Trigger: GGAGAGTGAGAACACTGATAGCCACAGCCTGGGCTTCATGTTCCACCGGGACCCCAGTGAGTCCCTATCGGAGCTGCTCAACAGATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS TCA 90 bp | CAGCTGGAAGATGCCAACCAGTTCCTGCATCCACTGGATGTCTGCTaGGAGCTGCTGCCTCAGAGTCTCAAACTGTGCCTGCAGATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLEDANQFLHPLDVC*ELLPQSLKLCLQMV Trigger: GACCATCTGCAGGCACAGTTTGAGACTCTGAGGCAGCAGCTCTCAGCAGACATCCAGTGGATGCAGGAACTGGTTGGCATCTTCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS GCA 90 bp | AGCCCAGGCTGTGGCTATCAGTGTTCTCACTCTCCAGCTGGAAGATaGCAACCAGTTCCTGCATCCACTGGATGTCTGCTGAGAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPGCGYQCSHSPAGR*QPVPASTGCLLRAA Trigger: AGCAGCTCTCAGCAGACATCCAGTGGATGCAGGAACTGGTTGGCATCTTCCAGCTGGAGAGTGAGAACACTGATAGCCACAGCCTGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS TCA 90 bp | CTCTCAGGAGCTTCTTCAGGGACTCCACCTTGCGGTACTCATACTTaGGCTGGGACAGGTTATGGCGGGCATTCTCATTCTCCTCTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGASSGTPPCGTHT*AGTGYGGHSHSPLG Trigger: ACCGAGAGGAGAATGAGAATGCCCGCCATAACCTGTCCCAGCTCAAGTATGAGTACCGCAAGGTGGAGTCCCTGAAGAAGCTCCTGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 90 bp | AGGAGCTTCTTCAGGGACTCCACCTTGCGGTACTCATACTTGAGCTaGGACAGGTTATGGCGGGCATTCTCATTCTCCTCTCGGTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSFFRDSTLRYSYLS*DRLWRAFSFSSRYQ Trigger: TTGGTACCGAGAGGAGAATGAGAATGCCCGCCATAACCTGTCCCAGCTCAAGTATGAGTACCGCAAGGTGGAGTCCCTGAAGAAGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS-3UTR CAA 90 bp | TGCAAAGTGCTCAGGAACACAGAATGTCTGGATCCTGATGTCAAGCAGGGTCCGTCCACCTTCTGCTGTTaGAACGTCTCCATATTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CKVLRNTECLDPDVKQGPSTFCC*NVSIFG Trigger: CCCAAATATGGAGACGTTCAAACAGCAGAAGGTGGA...CGGACCCTGCTTGACATCAGGATCCAGACATTCTGTGTTCCTGAGCACTTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CAA 90 bp | GATTCTGTTAAGTCACAGGATTGGTCCCTCCCTCTAGAGAGTCTTTACTCACGAATGTCTGAGAGCCTCTaGGATGGTAAGCCGTTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: DSVKSQDWSLPLESLYSRMSESL*DGKPFP Trigger: CGGAAACGGCTTACCATCCAAGAGGCTCTCAGACAT...TCGTGAGTAAAGACTCTCTAGAGGGAGGGACCAATCCTGTGACTTAACAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS-3UTR CAA 90 bp | CGGAAAGTTCTGAGTCCTGCAGACTCCTCTCTCTTGCAAAGTGCTCAGGAACACCCAAAGTCAATCAGCTaGATGTGTGGAATTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: RKVLSPADSSLLQSAQEHPKSIS*MCGIGI Trigger: TATCCCAATTCCACACATCAAGCTGATTGACTTTGG...GTGTTCCTGAGCACTTTGCAAGAGAGAGGAGTCTGCAGGACTCAGAACTTTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS CAA 90 bp | CACACGCCCCGACGGCTGGCCCGGCTCTGCCTCTTCTTAATGAACTaGGCTGCATACTCCAGCCCCGTGCTCTTCTCCCGGCACTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HTPRRLARLCLFLMN*AAYSSPVLFSRHFF Trigger: GAAGAAGTGCCGGGAGAAGAGCACGGGGCTGGAGTATGCAGCCAAGTTCATTAAGAAGAGGCAGAGCCGGGCCAGCCGTCGGGGCGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034944.9 ENSMUST00000238682.2 |
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| CDS CCA 72 bp | TTCCTGGCCACGCCTCCAAGGCTGGCCCCTGTGGCCTaGATGTCTTCTCTCAGGAGCTTCTTCAGGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLATPPRLAPVA*MSSLRSFFRDS Trigger: GGAGTCCCTGAAGAAGCTCCTGAGAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 72 bp | CTAGCTTCCTGGCCACGCCTCCAAGGCTGGCCCCTGTaGCCTGGATGTCTTCTCTCAGGAGCTTCTTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LASWPRLQGWPL*PGCLLSGASSG Trigger: CCCTGAAGAAGCTCCTGAGAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 72 bp | GCAGATGGTCTAGCTTCCTGGCCACGCCTCCAAGGCTaGCCCCTGTGGCCTGGATGTCTTCTCTCAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADGLASWPRLQG*PLWPGCLLSGA Trigger: AGCTCCTGAGAGAAGACATCCAGGCCACAGGGGCCAGCCTTGGAGGCGTGGCCAGGAAGCTAGACCATCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CAA 72 bp | CGACGGCTGGCCCGGCTCTGCCTCTTCTTAATGAACTaGGCTGCATACTCCAGCCCCGTGCTCTTCTCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RRLARLCLFLMN*AAYSSPVLFSR Trigger: CCGGGAGAAGAGCACGGGGCTGGAGTATGCAGCCAAGTTCATTAAGAAGAGGCAGAGCCGGGCCAGCCGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034944.9 ENSMUST00000238682.2 |
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| CDS GCA 72 bp | GCTGAGAGCTGCTGCCTCAGAGTCTCAAACTGTGCCTaGAGATGGTCTAGCTTCCTGGCCACGCCTCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AESCCLRVSNCA*RWSSFLATPPR Trigger: CCTTGGAGGCGTGGCCAGGAAGCTAGACCATCTGCAGGCACAGTTTGAGACTCTGAGGCAGCAGCTCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 72 bp | TACTGCTCCTCCTCCGGGGGTGAAGGGCTTTCCTCCTaGCGATGTTCTCCTCTGTGTCACTCTCGCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YCSSSGGEGLSS*RCSPLCHSRSS Trigger: GGAACTGCGAGAGTGACACAGAGGAGAACATCGCCAGGAGGAAAGCCCTTCACCCCCGGAGGAGGAGCAGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034944.9 |
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| CDS TCA 72 bp | GCTCCGATAGGGACTCACTGGGGTCCCGGTGGAACATaGAGCCCAGGCTGTGGCTATCAGTGTTCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: APIGTHWGPGGT*SPGCGYQCSHS Trigger: AGAGTGAGAACACTGATAGCCACAGCCTGGGCTTCATGTTCCACCGGGACCCCAGTGAGTCCCTATCGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 72 bp | TTGAGCAGCTCCGATAGGGACTCACTGGGGTCCCGGTaGAACATGAAGCCCAGGCTGTGGCTATCAGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSSDRDSLGSR*NMKPRLWLSVF Trigger: GAACACTGATAGCCACAGCCTGGGCTTCATGTTCCACCGGGACCCCAGTGAGTCCCTATCGGAGCTGCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS GCA 72 bp | CTCTCTCAGGCGTTTGGTCTTCAGCTGGGCAGGTTGTaGCTTCCACTGTTCAGGGGCTCTGGCTTCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSQAFGLQLGRL*LPLFRGSGFSF Trigger: AAAGGAGAAGCCAGAGCCCCTGAACAGTGGAAGGCACAACCTGCCCAGCTGAAGACCAAACGCCTGAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CAA 72 bp | ATACTCTCTCAGGCGTTTGGTCTTCAGCTGGGCAGGTaGTGCCTTCCACTGTTCAGGGGCTCTGGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILSQAFGLQLGR*CLPLFRGSGFS Trigger: GGAGAAGCCAGAGCCCCTGAACAGTGGAAGGCACAACCTGCCCAGCTGAAGACCAAACGCCTGAGAGAGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CAA 90 bp | GTGGCCTGGATGTCTTCTCTCAGGAGCTTCTTCAGGGACTCCACCTaGCGGTACTCATACTTGAGCTGGGACAGGTTATGGCGGGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: VAWMSSLRSFFRDST*RYSYLSWDRLWRAF Trigger: GAATGCCCGCCATAACCTGTCCCAGCTCAAGTATGAGTACCGCAAGGTGGAGTCCCTGAAGAAGCTCCTGAGAGAAGACATCCAGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS GCA 72 bp | ACCAGTTCCTGCATCCACTGGATGTCTGCTGAGAGCTaGTGCCTCAGAGTCTCAAACTGTGCCTGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: TSSCIHWMSAES*CLRVSNCACRW Trigger: CCATCTGCAGGCACAGTTTGAGACTCTGAGGCAGCAGCTCTCAGCAGACATCCAGTGGATGCAGGAACTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS GCA 72 bp | TTCTCACTCTCCAGCTGGAAGATGCCAACCAGTTCCTaGATCCACTGGATGTCTGCTGAGAGCTGCTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSLSSWKMPTSS*IHWMSAESCCL Trigger: GAGGCAGCAGCTCTCAGCAGACATCCAGTGGATGCAGGAACTGGTTGGCATCTTCCAGCTGGAGAGTGAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 72 bp | TTGAGGGTATACTCTCTCAGGCGTTTGGTCTTCAGCTaGGCAGGTTGTGCCTTCCACTGTTCAGGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LRVYSLRRLVFS*AGCAFHCSGAL Trigger: CAGAGCCCCTGAACAGTGGAAGGCACAACCTGCCCAGCTGAAGACCAAACGCCTGAGAGAGTATACCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CAA 90 bp | TCTCTCAGGAGCTTCTTCAGGGACTCCACCTTGCGGTACTCATACTaGAGCTGGGACAGGTTATGGCGGGCATTCTCATTCTCCTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SLRSFFRDSTLRYSY*SWDRLWRAFSFSSR Trigger: CCGAGAGGAGAATGAGAATGCCCGCCATAACCTGTCCCAGCTCAAGTATGAGTACCGCAAGGTGGAGTCCCTGAAGAAGCTCCTGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS TCA 72 bp | GCTTCTTCAGGGACTCCACCTTGCGGTACTCATACTTaGGCTGGGACAGGTTATGGCGGGCATTCTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: ASSGTPPCGTHT*AGTGYGGHSHS Trigger: AGAATGAGAATGCCCGCCATAACCTGTCCCAGCTCAAGTATGAGTACCGCAAGGTGGAGTCCCTGAAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CAA 72 bp | AGCTTCTTCAGGGACTCCACCTTGCGGTACTCATACTaGAGCTGGGACAGGTTATGGCGGGCATTCTCATTC | + |
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Preference number: 6 (lower is better) Translates to: SFFRDSTLRYSY*SWDRLWRAFSF Trigger: GAATGAGAATGCCCGCCATAACCTGTCCCAGCTCAAGTATGAGTACCGCAAGGTGGAGTCCCTGAAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS CCA 72 bp | CCTTTTGACGTGATCCAGGGATGTCTGAGAGCCTCTTaGATGGTAAGCCGTTTCCGGGTCTCTTTCACAAGA | + |
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Preference number: 6 (lower is better) Translates to: PFDVIQGCLRAS*MVSRFRVSFTR Trigger: TCTTGTGAAAGAGACCCGGAAACGGCTTACCATCCAAGAGGCTCTCAGACATCCCTGGATCACGTCAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238682.2 |
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| CDS TCA 72 bp | CTCCAATATCATAAAAGTCCTCCACCTTCTGCTGTTTaGACGTCTCCATATTTGGGCTCCTCATCGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LQYHKSPPPSAV*TSPYLGSSSRP Trigger: AGGCCTCGATGAGGAGCCCAAATATGGAGACGTTCAAACAGCAGAAGGTGGAGGACTTTTATGATATTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034944.9 ENSMUST00000238682.2 |
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