Pregenerated sensors for DAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068921Ensembl transcript IDs: ENSMUST00000090938.11, ENSMUST00000107491.11, ENSMUST00000172942.8, ENSMUST00000173021.8, ENSMUST00000173094.8, ENSMUST00000173135.8, ENSMUST00000174077.8, ENSMUST00000174402.8, ENSMUST00000174491.2, ENSMUST00000174571.8
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCACGGTAGCTaGAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCCGTGC | + |
Preference number: 1 (lower is better) Translates to: CSAWNLGTSSCAHGS*RKPVFPACHRRCPC Trigger: GCACGGACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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3UTR GCA 90 bp | CTCTCATGGCATGGACGACGTGGCAAGGGGCTGGCCACACCATCCTaGCAGAACTCAGCTGGAGCTTCAGCGATGTTCCACGGAATCAAA | + |
Preference number: 1 (lower is better) Translates to: LSWHGRRGKGLATPS*QNSAGASAMFHGIK Trigger: TTTGATTCCGTGGAACATCGCTGAAGCTCCAGCTGAGTTCTGGCAGGATGGTGTGGCCAGCCCCTTGCCACGTCGTCCATGCCATGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 90 bp | CTTCTGGCATTCCTCCTTGTCCCTCCTGCTGACTCATGCCAAGGTTaGGGCCTGGCTGTCTCTGTAGGTAGTGCCACCACTGCTGATTTG | + |
Preference number: 1 (lower is better) Translates to: LLAFLLVPPADSCQG*GLAVSVGSATTADL Trigger: CAAATCAGCAGTGGTGGCACTACCTACAGAGACAGCCAGGCCTCAACCTTGGCATGAGTCAGCAGGAGGGACAAGGAGGAATGCCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 90 bp | CAGCAGCCTGGGTGTGGTAGCTTCCTGGGGCCAATGAGATGGTGGTaGCATTTGCCATCTGCAAGCCTGACAATGAACACAGAAGGAGAG | + |
Preference number: 1 (lower is better) Translates to: QQPGCGSFLGPMRWW*HLPSASLTMNTEGE Trigger: CTCTCCTTCTGTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATTGGCCCCAGGAAGCTACCACACCCAGGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 90 bp | CATTGGCCCAGCAGAGGCAGGTCCCTAGGATGCATCCCAGTACTGTaGGATACTGTTTCACTAACAGCCTTTGCAGTTGTGGGAGTTGGT | + |
Preference number: 1 (lower is better) Translates to: HWPSRGRSLGCIPVL*DTVSLTAFAVVGVG Trigger: ACCAACTCCCACAACTGCAAAGGCTGTTAGTGAAACAGTATCCCACAGTACTGGGATGCATCCTAGGGACCTGCCTCTGCTGGGCCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 90 bp | GCCAGCAAACAGAACACCAGAGAAACTGACAGAGTCTGGCCAGGGTaGGAACCTTCCTTGTTGCAAATCCAATACAGCACTCAGGAGCAG | + |
Preference number: 1 (lower is better) Translates to: ASKQNTRETDRVWPG*EPSLLQIQYSTQEQ Trigger: CTGCTCCTGAGTGCTGTATTGGATTTGCAACAAGGAAGGTTCTCACCCTGGCCAGACTCTGTCAGTTTCTCTGGTGTTCTGTTTGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 90 bp | ATCAGTGCTCAATATGGAAGCAGAAGCCCCAGGAGACACATACAATaGCTTGTAGGATGGGGTTGTAGCTCAGTGGAGAGCCAACATTGG | + |
Preference number: 1 (lower is better) Translates to: ISAQYGSRSPRRHIQ*LVGWGCSSVESQHW Trigger: CCAATGTTGGCTCTCCACTGAGCTACAACCCCATCCTACAAGTCATTGTATGTGTCTCCTGGGGCTTCTGCTTCCATATTGAGCACTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 90 bp | GAACTGAGTTTCTTCAGATGCCAGCAAACAGAACACCAGAGAAACTaGCAGAGTCTGGCCAGGGTGAGAACCTTCCTTGTTGCAAATCCA | + |
Preference number: 1 (lower is better) Translates to: ELSFFRCQQTEHQRN*QSLARVRTFLVANP Trigger: TGGATTTGCAACAAGGAAGGTTCTCACCCTGGCCAGACTCTGTCAGTTTCTCTGGTGTTCTGTTTGCTGGCATCTGAAGAAACTCAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 90 bp | AGACCATGGACGTCAGTCTTTGGCTTCACACACAAGGCATCCTACTaGTGTAGTAAACCTCCCCAAACTAAGCAAAGTAAAAGGTCTGTG | + |
Preference number: 1 (lower is better) Translates to: RPWTSVFGFTHKASY*CSKPPQTKQSKRSV Trigger: CACAGACCTTTTACTTTGCTTAGTTTGGGGAGGTTTACTACAGCAGTAGGATGCCTTGTGTGTGAAGCCAAAGACTGACGTCCATGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 90 bp | AAGAGAAGCCAAGAGCTAGTACATGAGAAATGTGGAAATGGGATCTaGATTCTCACTGGGCATGGCACCTCTAACTACCCTAAGCACCTA | + |
Preference number: 1 (lower is better) Translates to: KRSQELVHEKCGNGI*ILTGHGTSNYPKHL Trigger: TAGGTGCTTAGGGTAGTTAGAGGTGCCATGCCCAGTGAGAATCCAGATCCCATTTCCACATTTCTCATGTACTAGCTCTTGGCTTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 90 bp | AAACACCCAGAAATGCCATTCTTGATTAGGACTGGGTGGTACCAGTaGGAGCCTTACAATGTGATGAGCTTCCCAAAGGCACAAGGTATA | + |
Preference number: 1 (lower is better) Translates to: KHPEMPFLIRTGWYQ*EPYNVMSFPKAQGI Trigger: TATACCTTGTGCCTTTGGGAAGCTCATCACATTGTAAGGCTCTCACTGGTACCACCCAGTCCTAATCAAGAATGGCATTTCTGGGTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 90 bp | AAAGGACATGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTaGTCTGCCTTACACTGTGTAGCTGAGCTGCATTTGTCAGGACTC | + |
Preference number: 1 (lower is better) Translates to: KGHVMKDLLLIMPMY*SALHCVAELHLSGL Trigger: GAGTCCTGACAAATGCAGCTCAGCTACACAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACATGTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CAA 90 bp | CCTGGGTGTGGTAGCTTCCTGGGGCCAATGAGATGGTGGTGGCATTaGCCATCTGCAAGCCTGACAATGAACACAGAAGGAGAGGGCTCA | + |
Preference number: 2 (lower is better) Translates to: PGCGSFLGPMRWWWH*PSASLTMNTEGEGS Trigger: TGAGCCCTCTCCTTCTGTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATTGGCCCCAGGAAGCTACCACACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | GCTGTAGAGCAAGCTAGCCTGAAATTAGAGATTGAGTGGCCTCTGCCTACCAAGCCAGCAGAGAGTGACTaGGGAAGACCATGGACGTCA | + |
Preference number: 2 (lower is better) Translates to: AVEQASLKLEIEWPLPTKPAESD*GRPWTS Trigger: TGACGTCCATGGTCTTCCTCAGTCACTCTCTGCTGG...CTTGGTAGGCAGAGGCCACTCAATCTCTAATTTCAGGCTAGCTTGCTCTACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | GCAGTTGTGGGAGTTGGTCCTGAATCTGATGTGAGTGATCTCTTGTTGAACCCAGAACACCAGAGAAACTaGCAGAGTCTGGCCAGGGTG | + |
Preference number: 2 (lower is better) Translates to: AVVGVGPESDVSDLLLNPEHQRN*QSLARV Trigger: CACCCTGGCCAGACTCTGTCAGTTTCTCTGGTGTTC...TGGGTTCAACAAGAGATCACTCACATCAGATTCAGGACCAACTCCCACAACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR GCA 90 bp | TGTGATAGCTCAGCACAGCACTCTCTAGTGTACAGAGGTACAGAGCCTGAGGCAGTGGCATTTGCCATCTaGAAGCCTGACAATGAACAC | + |
Preference number: 2 (lower is better) Translates to: CDSSAQHSLVYRGTEPEAVAFAI*KPDNEH Trigger: GTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCAC...TGCCTCAGGCTCTGTACCTCTGTACACTAGAGAGTGCTGTGCTGAGCTATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR GCA 90 bp | AGCCCTGTGGACTCAGATCCCTTGCAGTCAGGTAAACGCCAGGCACCACGGTCTAATGAGGCTACTTTTTaGTTTGAGACCGTTTTCTTC | + |
Preference number: 2 (lower is better) Translates to: SPVDSDPLQSGKRQAPRSNEATF*FETVFF Trigger: GAAGAAAACGGTCTCAAAGCAAAAAGTAGCCTCATT...AGACCGTGGTGCCTGGCGTTTACCTGACTGCAAGGGATCTGAGTCCACAGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR CCA 90 bp | CATGATAATGCCAACACTCAGGAGGCTGAGGCAGGACTGGGAAGTCAGTGCAGCAGGATAACATCATGGTaGGTGTTCAGGTTTTCACAG | + |
Preference number: 2 (lower is better) Translates to: HDNANTQEAEAGLGSQCSRITSW*VFRFSQ Trigger: CTGTGAAAACCTGAACACCCACCATGATGTTATCCT...GCTGCACTGACTTCCCAGTCCTGCCTCAGCCTCCTGAGTGTTGGCATTATCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | TGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTGGTCTGCCTTACACTGCAGCAGAAGGCTTACTaGCCCACACCAGGGCCTGTC | + |
Preference number: 2 (lower is better) Translates to: CDEGFVANNAHVLVCLTLQQKAY*PTPGPV Trigger: GACAGGCCCTGGTGTGGGTCAGTAAGCCTTCTGCTG...CAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | TGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTGGTCTGCCTTACACTGCAGAGGTACAGAGCCTaGGGCAATGCCTTCATGGCC | + |
Preference number: 2 (lower is better) Translates to: CDEGFVANNAHVLVCLTLQRYRA*GNAFMA Trigger: GGCCATGAAGGCATTGCCTCAGGCTCTGTACCTCTG...CAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | AGGCATCCTACTGCTGTAGTAAACCTCCCCAAACTAAGCAAAGTAAAAGGTCTGGTTACACCGTTGTCCTaGCCTCTGGATGTGTGCAAA | + |
Preference number: 2 (lower is better) Translates to: RHPTAVVNLPKLSKVKGLVTPLS*PLDVCK Trigger: TTTGCACACATCCAGAGGTCAGGACAACGGTGTAAC...CAGACCTTTTACTTTGCTTAGTTTGGGGAGGTTTACTACAGCAGTAGGATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | GCTGTAGAGCAAGCTAGCCTGAAATTAGAGATTGAGTGGCCTCTGCCTACCAAGGGCTACTTTTTGCTTTaGGACCGTTTTCTTCAGTTC | + |
Preference number: 2 (lower is better) Translates to: AVEQASLKLEIEWPLPTKGYFLL*DRFLQF Trigger: GAACTGAAGAAAACGGTCTCAAAGCAAAAAGTAGCC...CTTGGTAGGCAGAGGCCACTCAATCTCTAATTTCAGGCTAGCTTGCTCTACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR CCA 90 bp | TGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTGGTCTGCCTTACACTGTGTGCTGTGAGCTTCTaGCATTCCTCCTTGTCCCTC | + |
Preference number: 2 (lower is better) Translates to: CDEGFVANNAHVLVCLTLCAVSF*HSSLSL Trigger: GAGGGACAAGGAGGAATGCCAGAAGCTCACAGCACA...CAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | ATTAATACAACTGATAGTGAAGCCCTGTGGACTCAGATCCCTTGCAGTCAGGTACCAAGAGCTAGTACATaGGAAATGTGGAAATGGGAT | + |
Preference number: 2 (lower is better) Translates to: INTTDSEALWTQIPCSQVPRAST*EMWKWD Trigger: ATCCCATTTCCACATTTCTCATGTACTAGCTCTTGG...TACCTGACTGCAAGGGATCTGAGTCCACAGGGCTTCACTATCAGTTGTATTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR GCA 90 bp | CAAGAGCTAGTACATGAGAAATGTGGAAATGGGATCTGGATTCTCACTGGGCATGAGAACCTTCCTTGTTaGAAATCCAATACAGCACTC | + |
Preference number: 2 (lower is better) Translates to: QELVHEKCGNGIWILTGHENLPC*KSNTAL Trigger: GAGTGCTGTATTGGATTTGCAACAAGGAAGGTTCTC...ATGCCCAGTGAGAATCCAGATCCCATTTCCACATTTCTCATGTACTAGCTCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR TCA 90 bp | TGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTGGTCTGCCTTACACTGAGGAGACACATACAATaGCTTGTAGGATGGGGTTGT | + |
Preference number: 2 (lower is better) Translates to: CDEGFVANNAHVLVCLTLRRHIQ*LVGWGC Trigger: ACAACCCCATCCTACAAGTCATTGTATGTGTCTCCT...CAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 72 bp | CATGGACGACGTGGCAAGGGGCTGGCCACACCATCCTaGCAGAACTCAGCTGGAGCTTCAGCGATGTTCCAC | + |
Preference number: 3 (lower is better) Translates to: HGRRGKGLATPS*QNSAGASAMFH Trigger: GTGGAACATCGCTGAAGCTCCAGCTGAGTTCTGGCAGGATGGTGTGGCCAGCCCCTTGCCACGTCGTCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | GTAGGATGGGGTTGTAGCTCAGTGGAGAGCCAACATTaGCCCAGCAGAGGCAGGTCCCTAGGATGCATCCCA | + |
Preference number: 3 (lower is better) Translates to: VGWGCSSVESQH*PSRGRSLGCIP Trigger: TGGGATGCATCCTAGGGACCTGCCTCTGCTGGGCCAATGTTGGCTCTCCACTGAGCTACAACCCCATCCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 72 bp | CAGCCTGGCCCACCTCAGAAGTACCTGAGCTCCTACTaGCAGTACAGCAGAAGGCTTACTGACCCACACCAG | + |
Preference number: 3 (lower is better) Translates to: QPGPPQKYLSSY*QYSRRLTDPHQ Trigger: CTGGTGTGGGTCAGTAAGCCTTCTGCTGTACTGTCAGTAGGAGCTCAGGTACTTCTGAGGTGGGCCAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | CAGCCTGGGTGTGGTAGCTTCCTGGGGCCAATGAGATaGTGGTGGCATTTGCCATCTGCAAGCCTGACAATG | + |
Preference number: 3 (lower is better) Translates to: QPGCGSFLGPMR*WWHLPSASLTM Trigger: CATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATTGGCCCCAGGAAGCTACCACACCCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 72 bp | CCTGGGGCCAATGAGATGGTGGTGGCATTTGCCATCTaGAAGCCTGACAATGAACACAGAAGGAGAGGGCTC | + |
Preference number: 3 (lower is better) Translates to: PGANEMVVAFAI*KPDNEHRRRGL Trigger: GAGCCCTCTCCTTCTGTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATTGGCCCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | CAAGGGGCTGGCCACACCATCCTGCCAGAACTCAGCTaGAGCTTCAGCGATGTTCCACGGAATCAAAGTACA | + |
Preference number: 3 (lower is better) Translates to: QGAGHTILPELS*SFSDVPRNQST Trigger: TGTACTTTGATTCCGTGGAACATCGCTGAAGCTCCAGCTGAGTTCTGGCAGGATGGTGTGGCCAGCCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | GTAGTGTCAATGCACTATACATCATGGGTGCTCTCATaGCATGGACGACGTGGCAAGGGGCTGGCCACACCA | + |
Preference number: 3 (lower is better) Translates to: VVSMHYTSWVLS*HGRRGKGLATP Trigger: TGGTGTGGCCAGCCCCTTGCCACGTCGTCCATGCCATGAGAGCACCCATGATGTATAGTGCATTGACACTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | ATGATAATGCCAACACTCAGGAGGCTGAGGCAGGACTaGGAAGTCAGTGCAGCCTGGCCCACCTCAGAAGTA | + |
Preference number: 3 (lower is better) Translates to: MIMPTLRRLRQD*EVSAAWPTSEV Trigger: TACTTCTGAGGTGGGCCAGGCTGCACTGACTTCCCAGTCCTGCCTCAGCCTCCTGAGTGTTGGCATTATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 72 bp | AGCACAGCACTCTCTAGTGTACAGAGGTACAGAGCCTaGGGCAATGCCTTCATGGCCATGCTGTGCTACTGG | + |
Preference number: 3 (lower is better) Translates to: STALSSVQRYRA*GNAFMAMLCYW Trigger: CCAGTAGCACAGCATGGCCATGAAGGCATTGCCTCAGGCTCTGTACCTCTGTACACTAGAGAGTGCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 72 bp | CGGGCTGACTGGCAGAGTGATGACAGCTGCACGTGCTaGAGCAATACTCATGAAGGACGCACGATGTTTGGA | + |
Preference number: 3 (lower is better) Translates to: RADWQSDDSCTC*SNTHEGRTMFG Trigger: TCCAAACATCGTGCGTCCTTCATGAGTATTGCTTCAGCACGTGCAGCTGTCATCACTCTGCCAGTCAGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 72 bp | CCAGAGAGAAATGAATCAAAACTTCTGGTGGTGTGCTaGGGTTTCTTGCCGCTACCGTGGACTCGGGCTGAC | + |
Preference number: 3 (lower is better) Translates to: PERNESKLLVVC*GFLPLPWTRAD Trigger: GTCAGCCCGAGTCCACGGTAGCGGCAAGAAACCGCAGCACACCACCAGAAGTTTTGATTCATTTCTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 72 bp | ACAACTGATAGTGAAGCCCTGTGGACTCAGATCCCTTaGAGTCAGGTAAACGCCAGGCACCACGGTCTGTCA | + |
Preference number: 3 (lower is better) Translates to: TTDSEALWTQIP*SQVNARHHGLS Trigger: TGACAGACCGTGGTGCCTGGCGTTTACCTGACTGCAAGGGATCTGAGTCCACAGGGCTTCACTATCAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | GGGTGTGGTAGCTTCCTGGGGCCAATGAGATGGTGGTaGCATTTGCCATCTGCAAGCCTGACAATGAACACA | + |
Preference number: 3 (lower is better) Translates to: GCGSFLGPMRWW*HLPSASLTMNT Trigger: TGTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATTGGCCCCAGGAAGCTACCACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 72 bp | AGCCAACATTGGCCCAGCAGAGGCAGGTCCCTAGGATaGATCCCAGTACTGTGGGATACTGTTTCACTAACA | + |
Preference number: 3 (lower is better) Translates to: SQHWPSRGRSLG*IPVLWDTVSLT Trigger: TGTTAGTGAAACAGTATCCCACAGTACTGGGATGCATCCTAGGGACCTGCCTCTGCTGGGCCAATGTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | TGCTACGAAAGTAGGTGGAAGAGCTTGCGAACTCACTaGCCAGCTAGCCAGGCTGCAGTCAACAAAATCTGC | + |
Preference number: 3 (lower is better) Translates to: CYESRWKSLRTH*PASQAAVNKIC Trigger: GCAGATTTTGTTGACTGCAGCCTGGCTAGCTGGCCAGTGAGTTCGCAAGCTCTTCCACCTACTTTCGTAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | AGCAGAGGCAGGTCCCTAGGATGCATCCCAGTACTGTaGGATACTGTTTCACTAACAGCCTTTGCAGTTGTG | + |
Preference number: 3 (lower is better) Translates to: SRGRSLGCIPVL*DTVSLTAFAVV Trigger: CACAACTGCAAAGGCTGTTAGTGAAACAGTATCCCACAGTACTGGGATGCATCCTAGGGACCTGCCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | TCTGTAGGTAGTGCCACCACTGCTGATTTGAACTGCTaGTGTACCTGTGAAGTGTTTGGGAGTGGAGCAAGC | + |
Preference number: 3 (lower is better) Translates to: SVGSATTADLNC*CTCEVFGSGAS Trigger: GCTTGCTCCACTCCCAAACACTTCACAGGTACACCAGCAGTTCAAATCAGCAGTGGTGGCACTACCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR CAA 90 bp | CAAGAGCTAGTACATGAGAAATGTGGAAATGGGATCTGGATTCTCACTGGGCATGTTCAGCTTGGAACCTaGGGACTTCCTCATGCGCGC | + |
Preference number: 3 (lower is better) Translates to: QELVHEKCGNGIWILTGHVQLGT*GLPHAR Trigger: GCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAAC...ATGCCCAGTGAGAATCCAGATCCCATTTCCACATTTCTCATGTACTAGCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 72 bp | CAATATGGAAGCAGAAGCCCCAGGAGACACATACAATaGCTTGTAGGATGGGGTTGTAGCTCAGTGGAGAGC | + |
Preference number: 3 (lower is better) Translates to: QYGSRSPRRHIQ*LVGWGCSSVES Trigger: GCTCTCCACTGAGCTACAACCCCATCCTACAAGTCATTGTATGTGTCTCCTGGGGCTTCTGCTTCCATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR GCA 72 bp | CTGACAGAGTCTGGCCAGGGTGAGAACCTTCCTTGTTaGAAATCCAATACAGCACTCAGGAGCAGATCTACT | + |
Preference number: 3 (lower is better) Translates to: LTESGQGENLPC*KSNTALRSRST Trigger: AGTAGATCTGCTCCTGAGTGCTGTATTGGATTTGCAACAAGGAAGGTTCTCACCCTGGCCAGACTCTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 72 bp | CAGAACACCAGAGAAACTGACAGAGTCTGGCCAGGGTaGGAACCTTCCTTGTTGCAAATCCAATACAGCACT | + |
Preference number: 3 (lower is better) Translates to: QNTRETDRVWPG*EPSLLQIQYST Trigger: AGTGCTGTATTGGATTTGCAACAAGGAAGGTTCTCACCCTGGCCAGACTCTGTCAGTTTCTCTGGTGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR TCA 72 bp | TGCCAGCACACTAAGTTCTGGTCAGTCTGGGCTACATaGGGTTTGGTTTCAGAAAAGAAAGCAAACCCACGG | + |
Preference number: 3 (lower is better) Translates to: CQHTKFWSVWAT*GLVSEKKANPR Trigger: CCGTGGGTTTGCTTTCTTTTCTGAAACCAAACCTCATGTAGCCCAGACTGACCAGAACTTAGTGTGCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CCA 72 bp | ACACTAAGTTCTGGTCAGTCTGGGCTACATGAGGTTTaGTTTCAGAAAAGAAAGCAAACCCACGGCAGCAGC | + |
Preference number: 3 (lower is better) Translates to: TLSSGQSGLHEV*FQKRKQTHGSS Trigger: GCTGCTGCCGTGGGTTTGCTTTCTTTTCTGAAACCAAACCTCATGTAGCCCAGACTGACCAGAACTTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR-3UTR CAA 90 bp | GCTGTAGAGCAAGCTAGCCTGAAATTAGAGATTGAGTGGCCTCTGCCTACCAAGCAACACTTCTGTGTCTaGAATCTTTGTGCCCTAAGA | + |
Preference number: 3 (lower is better) Translates to: AVEQASLKLEIEWPLPTKQHFCV*NLCALR Trigger: TCTTAGGGCACAAAGATTCAAGACACAGAAGTGTTG...CTTGGTAGGCAGAGGCCACTCAATCTCTAATTTCAGGCTAGCTTGCTCTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR CCA 72 bp | GTGTACAGAGGTACAGAGCCTGAGGCAATGCCTTCATaGCCATGCTGTGCTACTGGCTTTGTTTCAAATTAT | + |
Preference number: 3 (lower is better) Translates to: VYRGTEPEAMPS*PCCATGFVSNY Trigger: ATAATTTGAAACAAAGCCAGTAGCACAGCATGGCCATGAAGGCATTGCCTCAGGCTCTGTACCTCTGTACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR TCA 72 bp | AATGCCCATGTATTGGTCTGCCTTACACTGTGTAGCTaGGCTGCATTTGTCAGGACTCCAGAGAGAAATGAA | + |
Preference number: 3 (lower is better) Translates to: NAHVLVCLTLCS*AAFVRTPERNE Trigger: TTCATTTCTCTCTGGAGTCCTGACAAATGCAGCTCAGCTACACAGTGTAAGGCAGACCAATACATGGGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR-3UTR CAA 90 bp | TGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTGGTCTGCCTTACACTGGTAGCTGAGCTGCATTaGTCAGGACTCCAGAGAGAA | + |
Preference number: 3 (lower is better) Translates to: CDEGFVANNAHVLVCLTLVAELH*SGLQRE Trigger: TTCTCTCTGGAGTCCTGACAAATGCAGCTCAGCTAC...CAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR GCA 72 bp | AGAGGTACAGAGCCTGAGGCAATGCCTTCATGGCCATaGTGTGCTACTGGCTTTGTTTCAAATTATGAATTA | + |
Preference number: 3 (lower is better) Translates to: RGTEPEAMPSWP*CATGFVSNYEL Trigger: TAATTCATAATTTGAAACAAAGCCAGTAGCACAGCATGGCCATGAAGGCATTGCCTCAGGCTCTGTACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR GCA 72 bp | ACGTCAGTCTTTGGCTTCACACACAAGGCATCCTACTaGTGTAGTAAACCTCCCCAAACTAAGCAAAGTAAA | + |
Preference number: 3 (lower is better) Translates to: TSVFGFTHKASY*CSKPPQTKQSK Trigger: TTTACTTTGCTTAGTTTGGGGAGGTTTACTACAGCAGTAGGATGCCTTGTGTGTGAAGCCAAAGACTGACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR CCA 72 bp | AAGGAGAGGGCTCAGTTACACCGTTGTCCTGACCTCTaGATGTGTGCAAACAATGATACAAGAGTAAAAAGT | + |
Preference number: 3 (lower is better) Translates to: KERAQLHRCPDL*MCANNDTRVKS Trigger: ACTTTTTACTCTTGTATCATTGTTTGCACACATCCAGAGGTCAGGACAACGGTGTAACTGAGCCCTCTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR TCA 72 bp | AGCGATGTTCCACGGAATCAAAGTACAAACAGGAATTaGGAAGCGTTACCTGTCTTATTAGGAATTCGGCTG | + |
Preference number: 3 (lower is better) Translates to: SDVPRNQSTNRN*EALPVLLGIRL Trigger: CAGCCGAATTCCTAATAAGACAGGTAACGCTTCTCAATTCCTGTTTGTACTTTGATTCCGTGGAACATCGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR TCA 72 bp | CCTAACAGTTTAGCATCATTGTACCACCAGGCAAGGTaGAACAAGAGAAGCCAAGAGCTAGTACATGAGAAA | + |
Preference number: 3 (lower is better) Translates to: PNSLASLYHQAR*NKRSQELVHEK Trigger: TTTCTCATGTACTAGCTCTTGGCTTCTCTTGTTTCACCTTGCCTGGTGGTACAATGATGCTAAACTGTTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR CCA 72 bp | GTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTaGTCTGCCTTACACTGTGTAGCTGAGCTGCATTTG | + |
Preference number: 3 (lower is better) Translates to: VMKDLLLIMPMY*SALHCVAELHL Trigger: CAAATGCAGCTCAGCTACACAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
3UTR-3UTR CAA 90 bp | CAGAAAATTCTTCAAATAAAGCATCAAACCTCAAAGACAGGGAAGAAACTACCTAAGTACAAACAGGAATaGAGAAGCGTTACCTGTCTT | + |
Preference number: 3 (lower is better) Translates to: QKILQIKHQTSKTGKKLPKYKQE*RSVTCL Trigger: AAGACAGGTAACGCTTCTCAATTCCTGTTTGTACTT...AGGTAGTTTCTTCCCTGTCTTTGAGGTTTGATGCTTTATTTGAAGAATTTTCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
CDS-3UTR TCA 90 bp | GCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCCAGCATGGCAGAGACTaGGGGTCTTTCCTGTCCCCT | + |
Preference number: 4 (lower is better) Translates to: ARTVAEGSLSSQHATAAVQHGRD*GSFLSP Trigger: AGGGGACAGGAAAGACCCTCAGTCTCTGCCATGCTG...GACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
||
CDS-3UTR GCA 90 bp | CATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGATCCTGGAGGGGGATaGTGTAGTGCTGACCCTCAT | + |
Preference number: 4 (lower is better) Translates to: HARTVAEGSLSSQHATAADPGGG*CSADPH Trigger: ATGAGGGTCAGCACTACAGCATCCCCCTCCAGGATC...AGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR CCA 90 bp | GCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCTCTGGGACGCTCAGCTaGAACCTGACTGTTCTGAGT | + |
Preference number: 4 (lower is better) Translates to: ARTVAEGSLSSQHATAAVSGTLS*NLTVLS Trigger: ACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGA...GACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR CCA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTTTGTTGTGAGTaGACTGTAGAAGCTCCCGGC | + |
Preference number: 4 (lower is better) Translates to: PHARTVAEGSLSSQHATAAVCCE*TVEAPG Trigger: GCCGGGAGCTTCTACAGTCCACTCACAACAAACAGC...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
||
CDS-3UTR TCA 90 bp | ATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCCAGCATGGCAGAGACTaGGGGTCTTTCCTGTCCCCT | + |
Preference number: 4 (lower is better) Translates to: ISAGQGVQLGTLGLPHARQHGRD*GSFLSP Trigger: AGGGGACAGGAAAGACCCTCAGTCTCTGCCATGCTG...GCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR TCA 90 bp | TCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCATTCCCCAGAGGGCATTaGCTCCATCCACAGCCACCA | + |
Preference number: 4 (lower is better) Translates to: SVQVRVFSLEPWDFLMRAFPRGH*LHPQPP Trigger: TGGTGGCTGTGGATGGAGTCAATGCCCTCTGGGGAA...TGCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CCA 90 bp | GCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCCCAAAGATGAGCATCTaGGATATGCAGAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: ARTVAEGSLSSQHATAAVPKMSI*DMQNQP Trigger: TGGCTGATTCTGCATATCCCAGATGCTCATCTTTGG...GACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
||
CDS-3UTR TCA 90 bp | CATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTTGTCTTGCACAAAAATaGACAGCATGGCAGAGACTG | + |
Preference number: 4 (lower is better) Translates to: HARTVAEGSLSSQHATAACLAQK*TAWQRL Trigger: CAGTCTCTGCCATGCTGTTCATTTTTGTGCAAGACA...AGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
||
CDS-3UTR TCA 90 bp | GCAGAAGGCTTACTGACCCACACCAGGGCCTGTCAATCAGTGCTCAATATGGAAAGCCCTAGGGCGCTCTaGGCCTTCAGCTCCTTCAGC | + |
Preference number: 4 (lower is better) Translates to: AEGLLTHTRACQSVLNMESPRAL*AFSSFS Trigger: GCTGAAGGAGCTGAAGGCTCAGAGCGCCCTAGGGCT...TTCCATATTGAGCACTGATTGACAGGCCCTGGTGTGGGTCAGTAAGCCTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
||
CDS-3UTR TCA 90 bp | TATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGAGCCCTAGGGCGCTCTaGGCCTTCAGCTCCTTCAGC | + |
Preference number: 4 (lower is better) Translates to: YPSVQVRVFSLEPWDFLMSPRAL*AFSSFS Trigger: GCTGAAGGAGCTGAAGGCTCAGAGCGCCCTAGGGCT...CATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR GCA 90 bp | ATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCGATCCTGGAGGGGGATaGTGTAGTGCTGACCCTCAT | + |
Preference number: 4 (lower is better) Translates to: ISAGQGVQLGTLGLPHARDPGGG*CSADPH Trigger: ATGAGGGTCAGCACTACAGCATCCCCCTCCAGGATC...GCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR CCA 90 bp | AGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCACGCTCGGGTCCAACTTCTaGACCCTGGAGAAAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: SAGQGVQLGTLGLPHARTLGSNF*TLEKSL Trigger: AAGGCTTTTCTCCAGGGTCCAGAAGTTGGACCCGAG...CGTGCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CCA 90 bp | CATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTCCAAAGATGAGCATCTaGGATATGCAGAATCAGCCA | + |
Preference number: 4 (lower is better) Translates to: HARTVAEGSLSSQHATAAPKMSI*DMQNQP Trigger: TGGCTGATTCTGCATATCCCAGATGCTCATCTTTGG...AGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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3UTR CAA 72 bp | TCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTaGGGACTTCCTCATGCGCGCACGGTAGCTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: SISAGQGVQLGT*GLPHARTVAEG Trigger: TCCTTCAGCTACCGTGCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR TCA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGATTATAGTTGGGAATaGGGATGGGAAGAAAAGGCT | + |
Preference number: 4 (lower is better) Translates to: PHARTVAEGSLSSQHATADYSWE*GWEEKA Trigger: AGCCTTTTCTTCCCATCCTCATTCCCAACTATAATC...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR TCA 90 bp | CATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGAAGCTTTCTCATGTTaGAGCCAGTTGTTCTCTAAG | + |
Preference number: 4 (lower is better) Translates to: HARTVAEGSLSSQHATAAEAFSC*SQLFSK Trigger: CTTAGAGAACAACTGGCTTCAACATGAGAAAGCTTC...AGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR GCA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCCAGCCAGTCATGTCTTaGACAAAAATGAACAGCATG | + |
Preference number: 4 (lower is better) Translates to: PHARTVAEGSLSSQHATAQPVMS*TKMNSM Trigger: CATGCTGTTCATTTTTGTGCAAGACATGACTGGCTG...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR GCA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCACGATTGCACCTCCATaGCAGTCATTTTTCACCATT | + |
Preference number: 4 (lower is better) Translates to: PHARTVAEGSLSSQHATATIAPP*QSFFTI Trigger: AATGGTGAAAAATGACTGGCATGGAGGTGCAATCGT...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000174571.8 |
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CDS-3UTR CCA 90 bp | GCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCCTGGATGAGCAAAATTaGTATTTTTCAGGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: ARTVAEGSLSSQHATAAVLDEQN*YFSGSP Trigger: TGGGCTACCTGAAAAATACCAATTTTGCTCATCCAG...GACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR CCA 90 bp | GCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCATTTTCCTTAGATTGTaGACAAGGGAGAGTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: ARTVAEGSLSSQHATAAVIFLRL*TRESSS Trigger: AGAGGAACTCTCCCTTGTCCACAATCTAAGGAAAAT...GACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR TCA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCTATCGCACAGCTGGATaGGCAAAATTGGTATTTTTC | + |
Preference number: 4 (lower is better) Translates to: PHARTVAEGSLSSQHATAYRTAG*AKLVFF Trigger: GAAAAATACCAATTTTGCTCATCCAGCTGTGCGATA...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR TCA 90 bp | TGTGATAGCTCAGCACAGCACTCTCTAGTGTACAGAGGTACAGAGCCTGAGGCACAGCATGGCAGAGACTaGGGGTCTTTCCTGTCCCCT | + |
Preference number: 4 (lower is better) Translates to: CDSSAQHSLVYRGTEPEAQHGRD*GSFLSP Trigger: AGGGGACAGGAAAGACCCTCAGTCTCTGCCATGCTG...TGCCTCAGGCTCTGTACCTCTGTACACTAGAGAGTGCTGTGCTGAGCTATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR GCA 90 bp | GGACTTCCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCCAGCCAGTCATGTCTTaGACAAAAATGAACAGCATG | + |
Preference number: 4 (lower is better) Translates to: GLPHARTVAEGSLSSQHAQPVMS*TKMNSM Trigger: CATGCTGTTCATTTTTGTGCAAGACATGACTGGCTG...GGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGGAAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CCA 90 bp | TATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGTGCGGGAAACAGTTCTaGGACGCTCAGCTGGAACCT | + |
Preference number: 4 (lower is better) Translates to: YPSVQVRVFSLEPWDFLMCGKQF*DAQLEP Trigger: AGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCA...CATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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3UTR CAA 72 bp | GGTAGCTTCCTGGGGCCAATGAGATGGTGGTGGCATTaGCCATCTGCAAGCCTGACAATGAACACAGAAGGA | + |
Preference number: 4 (lower is better) Translates to: GSFLGPMRWWWH*PSASLTMNTEG Trigger: TCCTTCTGTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATTGGCCCCAGGAAGCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | ATTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCGAGGAGGCAGGCCGTaGGGAAACACTGTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: ISYPSVQVRVFSLEPWDFRGGRP*GNTVFR Trigger: TCTGAAGACAGTGTTTCCTCACGGCCTGCCTCCTCG...GAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CCA 90 bp | GGACTTCCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCCTGGATGAGCAAAATTaGTATTTTTCAGGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: GLPHARTVAEGSLSSQHALDEQN*YFSGSP Trigger: TGGGCTACCTGAAAAATACCAATTTTGCTCATCCAG...GGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGGAAGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CCA 90 bp | CATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTACTTTCAAACTCCTTTaGATTATAGTTGGGAATGAG | + |
Preference number: 4 (lower is better) Translates to: HARTVAEGSLSSQHATAATFKLL*IIVGNE Trigger: CTCATTCCCAACTATAATCCAAAGGAGTTTGAAAGT...AGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR CCA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCACTTTCAAACTCCTTTaGATTATAGTTGGGAATGAG | + |
Preference number: 4 (lower is better) Translates to: PHARTVAEGSLSSQHATATFKLL*IIVGNE Trigger: CTCATTCCCAACTATAATCCAAAGGAGTTTGAAAGT...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS-3UTR TCA 90 bp | ATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCGATTATAGTTGGGAATaGGGATGGGAAGAAAAGGCT | + |
Preference number: 4 (lower is better) Translates to: ISAGQGVQLGTLGLPHARDYSWE*GWEEKA Trigger: AGCCTTTTCTTCCCATCCTCATTCCCAACTATAATC...GCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR CCA 90 bp | TTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCGCTGTTTGTTGTGAGTaGACTGTAGAAGCTCCCGGC | + |
Preference number: 4 (lower is better) Translates to: FHIHQCRSGCSAWNLGTSAVCCE*TVEAPG Trigger: GCCGGGAGCTTCTACAGTCCACTCACAACAAACAGC...GGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR CCA 90 bp | AGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCGCGCACGATTTTCCTTAGATTGTaGACAAGGGAGAGTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: SAGQGVQLGTLGLPHARTIFLRL*TRESSS Trigger: AGAGGAACTCTCCCTTGTCCACAATCTAAGGAAAAT...CGTGCGCGCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
3UTR CAA 72 bp | CTGGCTGTCTCTGTAGGTAGTGCCACCACTGCTGATTaGAACTGCTGGTGTACCTGTGAAGTGTTTGGGAGT | + |
Preference number: 4 (lower is better) Translates to: LAVSVGSATTAD*NCWCTCEVFGS Trigger: ACTCCCAAACACTTCACAGGTACACCAGCAGTTCAAATCAGCAGTGGTGGCACTACCTACAGAGACAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | ATCCTATCATTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTTTCCCCAGAGGGCATTaGCTCCATCCACAGCCACCA | + |
Preference number: 4 (lower is better) Translates to: ILSFHIHQCRSGCSAWNLFPRGH*LHPQPP Trigger: TGGTGGCTGTGGATGGAGTCAATGCCCTCTGGGGAA...AAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAATGATAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
||
CDS-3UTR CCA 90 bp | GCAGTTGTGGGAGTTGGTCCTGAATCTGATGTGAGTGATCTCTTGTTGAACCCACTCGGGTCCAACTTCTaGACCCTGGAGAAAAGCCTT | + |
Preference number: 4 (lower is better) Translates to: AVVGVGPESDVSDLLLNPLGSNF*TLEKSL Trigger: AAGGCTTTTCTCCAGGGTCCAGAAGTTGGACCCGAG...TGGGTTCAACAAGAGATCACTCACATCAGATTCAGGACCAACTCCCACAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR CCA 90 bp | AATGAGATGGTGGTGGCATTTGCCATCTGCAAGCCTGACAATGAACACAGAAGGGCTGTTTGTTGTGAGTaGACTGTAGAAGCTCCCGGC | + |
Preference number: 4 (lower is better) Translates to: NEMVVAFAICKPDNEHRRAVCCE*TVEAPG Trigger: GCCGGGAGCTTCTACAGTCCACTCACAACAAACAGC...CCTTCTGTGTTCATTGTCAGGCTTGCAGATGGCAAATGCCACCACCATCTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CAA 72 bp | CAGAGAGTGACTGAGGAAGACCATGGACGTCAGTCTTaGGCTTCACACACAAGGCATCCTACTGCTGTAGTA | + |
Preference number: 4 (lower is better) Translates to: QRVTEEDHGRQS*ASHTRHPTAVV Trigger: TACTACAGCAGTAGGATGCCTTGTGTGTGAAGCCAAAGACTGACGTCCATGGTCTTCCTCAGTCACTCTCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | TGTGATGAAGGATTTGTTGCTAATAATGCCCATGTATTGGTCTGCCTTACACTGCGAGGAGGCAGGCCGTaGGGAAACACTGTCTTCAGA | + |
Preference number: 4 (lower is better) Translates to: CDEGFVANNAHVLVCLTLRGGRP*GNTVFR Trigger: TCTGAAGACAGTGTTTCCTCACGGCCTGCCTCCTCG...CAGTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | ATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCTATCGCACAGCTGGATaGGCAAAATTGGTATTTTTC | + |
Preference number: 4 (lower is better) Translates to: IHQCRSGCSAWNLGTSSCYRTAG*AKLVFF Trigger: GAAAAATACCAATTTTGCTCATCCAGCTGTGCGATA...GCATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR TCA 90 bp | GATGAGCTTCCCAAAGGCACAAGGTATAATTTCCCAAGTTCAGCGGATGCCCACTGTCTTGCACAAAAATaGACAGCATGGCAGAGACTG | + |
Preference number: 4 (lower is better) Translates to: DELPKGTRYNFPSSADAHCLAQK*TAWQRL Trigger: CAGTCTCTGCCATGCTGTTCATTTTTGTGCAAGACA...GTGGGCATCCGCTGAACTTGGGAAATTATACCTTGTGCCTTTGGGAAGCTCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | ATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATTGTCTTGCACAAAAATaGACAGCATGGCAGAGACTG | + |
Preference number: 4 (lower is better) Translates to: ISISAGQGVQLGTLGLPHCLAQK*TAWQRL Trigger: CAGTCTCTGCCATGCTGTTCATTTTTGTGCAAGACA...ATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR TCA 90 bp | GGAAATGGGATCTGGATTCTCACTGGGCATGGCACCTCTAACTACCCTAAGCACGAAGCTTTCTCATGTTaGAGCCAGTTGTTCTCTAAG | + |
Preference number: 4 (lower is better) Translates to: GNGIWILTGHGTSNYPKHEAFSC*SQLFSK Trigger: CTTAGAGAACAACTGGCTTCAACATGAGAAAGCTTC...GTGCTTAGGGTAGTTAGAGGTGCCATGCCCAGTGAGAATCCAGATCCCATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR CCA 90 bp | ATCCTATCATTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTTCTGGGACGCTCAGCTaGAACCTGACTGTTCTGAGT | + |
Preference number: 4 (lower is better) Translates to: ILSFHIHQCRSGCSAWNLSGTLS*NLTVLS Trigger: ACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGA...AAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAATGATAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR GCA 90 bp | GATGAGCTTCCCAAAGGCACAAGGTATAATTTCCCAAGTTCAGCGGATGCCCACCAGCCAGTCATGTCTTaGACAAAAATGAACAGCATG | + |
Preference number: 4 (lower is better) Translates to: DELPKGTRYNFPSSADAHQPVMS*TKMNSM Trigger: CATGCTGTTCATTTTTGTGCAAGACATGACTGGCTG...GTGGGCATCCGCTGAACTTGGGAAATTATACCTTGTGCCTTTGGGAAGCTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR CCA 90 bp | GCCTTTGCAGTTGTGGGAGTTGGTCCTGAATCTGATGTGAGTGATCTCTTGTTGATTTTCCTTAGATTGTaGACAAGGGAGAGTTCCTCT | + |
Preference number: 4 (lower is better) Translates to: AFAVVGVGPESDVSDLLLIFLRL*TRESSS Trigger: AGAGGAACTCTCCCTTGTCCACAATCTAAGGAAAAT...CAACAAGAGATCACTCACATCAGATTCAGGACCAACTCCCACAACTGCAAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | ATTAATACAACTGATAGTGAAGCCCTGTGGACTCAGATCCCTTGCAGTCAGGTAGATTATAGTTGGGAATaGGGATGGGAAGAAAAGGCT | + |
Preference number: 4 (lower is better) Translates to: INTTDSEALWTQIPCSQVDYSWE*GWEEKA Trigger: AGCCTTTTCTTCCCATCCTCATTCCCAACTATAATC...TACCTGACTGCAAGGGATCTGAGTCCACAGGGCTTCACTATCAGTTGTATTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR CCA 90 bp | TTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCACTTTCAAACTCCTTTaGATTATAGTTGGGAATGAG | + |
Preference number: 4 (lower is better) Translates to: FHIHQCRSGCSAWNLGTSTFKLL*IIVGNE Trigger: CTCATTCCCAACTATAATCCAAAGGAGTTTGAAAGT...GGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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3UTR CAA 72 bp | AGCAAGCACCTGAAAGGACATGTGATGAAGGATTTGTaGCTAATAATGCCCATGTATTGGTCTGCCTTACAC | + |
Preference number: 4 (lower is better) Translates to: SKHLKGHVMKDL*LIMPMYWSALH Trigger: GTGTAAGGCAGACCAATACATGGGCATTATTAGCAACAAATCCTTCATCACATGTCCTTTCAGGTGCTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR TCA 90 bp | ATCCTATCATTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTTATCGCACAGCTGGATaGGCAAAATTGGTATTTTTC | + |
Preference number: 4 (lower is better) Translates to: ILSFHIHQCRSGCSAWNLYRTAG*AKLVFF Trigger: GAAAAATACCAATTTTGCTCATCCAGCTGTGCGATA...AAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAATGATAGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CCA 90 bp | GCCACGGTAAAGTGGAAATTTAAGGATTCTCTGGAAAGCTGGTTGGATGGTGTTCTGGATGAGCAAAATTaGTATTTTTCAGGTAGCCCA | + |
Preference number: 4 (lower is better) Translates to: ATVKWKFKDSLESWLDGVLDEQN*YFSGSP Trigger: TGGGCTACCTGAAAAATACCAATTTTGCTCATCCAG...AACACCATCCAACCAGCTTTCCAGAGAATCCTTAAATTTCCACTTTACCGTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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3UTR CAA 72 bp | AGGCAATGCCTTCATGGCCATGCTGTGCTACTGGCTTaGTTTCAAATTATGAATTATGAGTGGGCAATTAGT | + |
Preference number: 4 (lower is better) Translates to: RQCLHGHAVLLA*FQIMNYEWAIS Trigger: ACTAATTGCCCACTCATAATTCATAATTTGAAACAAAGCCAGTAGCACAGCATGGCCATGAAGGCATTGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR GCA 90 bp | CAGAAAATTCTTCAAATAAAGCATCAAACCTCAAAGACAGGGAAGAAACTACCTACGATTGCACCTCCATaGCAGTCATTTTTCACCATT | + |
Preference number: 4 (lower is better) Translates to: QKILQIKHQTSKTGKKLPTIAPP*QSFFTI Trigger: AATGGTGAAAAATGACTGGCATGGAGGTGCAATCGT...AGGTAGTTTCTTCCCTGTCTTTGAGGTTTGATGCTTTATTTGAAGAATTTTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR CAA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCTCAAGCTCAACACGATaGCACCTCCATGCCAGTCAT | + |
Preference number: 5 (lower is better) Translates to: PHARTVAEGSLSSQHATASSSTR*HLHASH Trigger: ATGACTGGCATGGAGGTGCAATCGTGTTGAGCTTGA...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000174571.8 |
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CDS-3UTR CAA 90 bp | GCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCGCTGTCTCCTCCCTTCTTCTGTaGAAGCTTTCTCATGTTGAA | + |
Preference number: 5 (lower is better) Translates to: ARTVAEGSLSSQHATAAVSSLLL*KLSHVE Trigger: TTCAACATGAGAAAGCTTCAACAGAAGAAGGGAGGA...GACAGCGGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS CCA 90 bp | CCATCAGACAAGCTTCGCCAAAAGTCTTCACCGGGTCACTGTCACTaGTGCGGGAAACAGTTCTGGGACGCTCAGCTGGAACCTGACTGT | + |
Preference number: 5 (lower is better) Translates to: PSDKLRQKSSPGHCH*CGKQFWDAQLEPDC Trigger: ACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCGGTGAAGACTTTTGGCGAAGCTTGTCTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS-3UTR CAA 90 bp | CCTCATGCGCGCACGGTAGCTGAAGGAAGCCTGTCTTCCCAGCATGCCACCGCCTCAGCCAGTCATGTCTaGCACAAAAATGAACAGCAT | + |
Preference number: 5 (lower is better) Translates to: PHARTVAEGSLSSQHATASASHV*HKNEQH Trigger: ATGCTGTTCATTTTTGTGCAAGACATGACTGGCTGA...GGCGGTGGCATGCTGGGAAGACAGGCTTCCTTCAGCTACCGTGCGCGCATGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000174571.8 |
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CDS GCA 90 bp | TCAGACAAGCTTCGCCAAAAGTCTTCACCGGGTCACTGTCACTGGTaGGGGAAACAGTTCTGGGACGCTCAGCTGGAACCTGACTGTTCT | + |
Preference number: 5 (lower is better) Translates to: SDKLRQKSSPGHCHW*GKQFWDAQLEPDCS Trigger: AGAACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCGGTGAAGACTTTTGGCGAAGCTTGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS CCA 90 bp | CAAAAGTCTTCACCGGGTCACTGTCACTGGTGCGGGAAACAGTTCTaGGACGCTCAGCTGGAACCTGACTGTTCTGAGTCGCTTGAACAC | + |
Preference number: 5 (lower is better) Translates to: QKSSPGHCHWCGKQF*DAQLEPDCSESLEH Trigger: GTGTTCAAGCGACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCGGTGAAGACTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS CCA 90 bp | CGGGTCACTGTCACTGGTGCGGGAAACAGTTCTGGGACGCTCAGCTaGAACCTGACTGTTCTGAGTCGCTTGAACACTCATGTGCAAAAA | + |
Preference number: 5 (lower is better) Translates to: RVTVTGAGNSSGTLS*NLTVLSRLNTHVQK Trigger: TTTTTGCACATGAGTGTTCAAGCGACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000172942.8 ENSMUST00000173021.8 ENSMUST00000173135.8 ENSMUST00000174077.8 ENSMUST00000174402.8 ENSMUST00000174491.2 |
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CDS-3UTR CAA 90 bp | AGCCCTGTGGACTCAGATCCCTTGCAGTCAGGTAAACGCCAGGCACCACGGTCTTCCTCCCTTCTTCTGTaGAAGCTTTCTCATGTTGAA | + |
Preference number: 5 (lower is better) Translates to: SPVDSDPLQSGKRQAPRSSSLLL*KLSHVE Trigger: TTCAACATGAGAAAGCTTCAACAGAAGAAGGGAGGA...AGACCGTGGTGCCTGGCGTTTACCTGACTGCAAGGGATCTGAGTCCACAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS TCA 90 bp | AATTGGTATTTTTCAGGTAGCCCAGAAGCTCGAGAGCTGGCTTCCTaGCCATCAGACAAGCTTCGCCAAAAGTCTTCACCGGGTCACTGT | + |
Preference number: 5 (lower is better) Translates to: NWYFSGSPEARELAS*PSDKLRQKSSPGHC Trigger: ACAGTGACCCGGTGAAGACTTTTGGCGAAGCTTGTCTGATGGTCAGGAAGCCAGCTCTCGAGCTTCTGGGCTACCTGAAAAATACCAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS TCA 90 bp | AATTGGTATTTTTCAGGTAGCCCAGAAGCTCGAGAGCTGGCTTCCTaGCCATCAGACAAGCTTCGCCAAAAGTCTTCACCTGCATCATGT | + |
Preference number: 5 (lower is better) Translates to: NWYFSGSPEARELAS*PSDKLRQKSSPASC Trigger: ACATGATGCAGGTGAAGACTTTTGGCGAAGCTTGTCTGATGGTCAGGAAGCCAGCTCTCGAGCTTCTGGGCTACCTGAAAAATACCAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000173021.8 ENSMUST00000173135.8 ENSMUST00000174077.8 ENSMUST00000174402.8 |
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CDS-3UTR CAA 90 bp | TGTGATAGCTCAGCACAGCACTCTCTAGTGTACAGAGGTACAGAGCCTGAGGCATCAGCCAGTCATGTCTaGCACAAAAATGAACAGCAT | + |
Preference number: 5 (lower is better) Translates to: CDSSAQHSLVYRGTEPEASASHV*HKNEQH Trigger: ATGCTGTTCATTTTTGTGCAAGACATGACTGGCTGA...TGCCTCAGGCTCTGTACCTCTGTACACTAGAGAGTGCTGTGCTGAGCTATCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090938.11 |
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CDS-3UTR CAA 90 bp | TATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGTCCTCCCTTCTTCTGTaGAAGCTTTCTCATGTTGAA | + |
Preference number: 5 (lower is better) Translates to: YPSVQVRVFSLEPWDFLMSSLLL*KLSHVE Trigger: TTCAACATGAGAAAGCTTCAACAGAAGAAGGGAGGA...CATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CAA 90 bp | ATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATACTGTTCTGAGTCGCTaGAACACTCATGTGCAAAAA | + |
Preference number: 5 (lower is better) Translates to: ISISAGQGVQLGTLGLPHTVLSR*NTHVQK Trigger: TTTTTGCACATGAGTGTTCAAGCGACTCAGAACAGT...ATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CAA 90 bp | TATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCTTGGGACTTCCTCATGCCAAACATACTTCTCTaGAACTTTTATCTGACTCAG | + |
Preference number: 5 (lower is better) Translates to: YPSVQVRVFSLEPWDFLMPNILL*NFYLTQ Trigger: CTGAGTCAGATAAAAGTTCAAGAGAAGTATGTTTGG...CATGAGGAAGTCCCAAGGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS-3UTR CAA 90 bp | ACATCCTATCATTTCATATCCATCAGTGCAGGTCAGGGTGTTCAGCTTGGAACCACTGTTCTGAGTCGCTaGAACACTCATGTGCAAAAA | + |
Preference number: 5 (lower is better) Translates to: TSYHFISISAGQGVQLGTTVLSR*NTHVQK Trigger: TTTTTGCACATGAGTGTTCAAGCGACTCAGAACAGT...GGTTCCAAGCTGAACACCCTGACCTGCACTGATGGATATGAAATGATAGGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 |
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CDS GCA 72 bp | ACAGCGAGGCACAGAGCCGCTCCAGCTGCTCAGGGTTaGAGTTACTCAGGAACCTCAGCTCCTTCCTCCCTT | + |
Preference number: 6 (lower is better) Translates to: TARHRAAPAAQG*SYSGTSAPSSL Trigger: AAGGGAGGAAGGAGCTGAGGTTCCTGAGTAACTGCAACCCTGAGCAGCTGGAGCGGCTCTGTGCCTCGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000173094.8 ENSMUST00000173135.8 ENSMUST00000174571.8 |
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CDS CCA 72 bp | TCACCGGGTCACTGTCACTGGTGCGGGAAACAGTTCTaGGACGCTCAGCTGGAACCTGACTGTTCTGAGTCG | + |
Preference number: 6 (lower is better) Translates to: SPGHCHWCGKQF*DAQLEPDCSES Trigger: CGACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS TCA 72 bp | GTCTTCACCTGCATCATGTACCGAGGAGGCAGGCCGTaGGGAAACACTGTCTTCAGATCCTGGAGGGGGATG | + |
Preference number: 6 (lower is better) Translates to: VFTCIMYRGGRP*GNTVFRSWRGM Trigger: CATCCCCCTCCAGGATCTGAAGACAGTGTTTCCTCACGGCCTGCCTCCTCGGTACATGATGCAGGTGAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000173021.8 ENSMUST00000173135.8 ENSMUST00000174077.8 ENSMUST00000174402.8 |
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CDS GCA 72 bp | CTTCGCCAAAAGTCTTCACCGGGTCACTGTCACTGGTaGGGGAAACAGTTCTGGGACGCTCAGCTGGAACCT | + |
Preference number: 6 (lower is better) Translates to: LRQKSSPGHCHW*GKQFWDAQLEP Trigger: AGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCGGTGAAGACTTTTGGCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS CCA 72 bp | CCTTCAGCTCCTTCAGCACGACCCCAACAGCGTCAGTaGCATTCCTCACTCGGGTTAGGCCCTGTTCAACAA | + |
Preference number: 6 (lower is better) Translates to: PSAPSARPQQRQ*HSSLGLGPVQQ Trigger: TTGTTGAACAGGGCCTAACCCGAGTGAGGAATGCCACTGACGCTGTTGGGGTCGTGCTGAAGGAGCTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000173135.8 |
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CDS CCA 72 bp | AAGCTTCGCCAAAAGTCTTCACCGGGTCACTGTCACTaGTGCGGGAAACAGTTCTGGGACGCTCAGCTGGAA | + |
Preference number: 6 (lower is better) Translates to: KLRQKSSPGHCH*CGKQFWDAQLE Trigger: TTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGACAGTGACCCGGTGAAGACTTTTGGCGAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172942.8 |
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CDS CCA 72 bp | GTCACTGGTGCGGGAAACAGTTCTGGGACGCTCAGCTaGAACCTGACTGTTCTGAGTCGCTTGAACACTCAT | + |
Preference number: 6 (lower is better) Translates to: VTGAGNSSGTLS*NLTVLSRLNTH Trigger: ATGAGTGTTCAAGCGACTCAGAACAGTCAGGTTCCAGCTGAGCGTCCCAGAACTGTTTCCCGCACCAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000172942.8 ENSMUST00000173021.8 ENSMUST00000173135.8 ENSMUST00000174077.8 ENSMUST00000174402.8 ENSMUST00000174491.2 |
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CDS CCA 72 bp | ATTGGTATTTTTCAGGTAGCCCAGAAGCTCGAGAGCTaGCTTCCTGACCATCAGACAAGCTTCGCCAAAAGT | + |
Preference number: 6 (lower is better) Translates to: IGIFQVAQKLES*LPDHQTSFAKS Trigger: ACTTTTGGCGAAGCTTGTCTGATGGTCAGGAAGCCAGCTCTCGAGCTTCTGGGCTACCTGAAAAATACCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000172942.8 ENSMUST00000173021.8 ENSMUST00000173094.8 ENSMUST00000173135.8 ENSMUST00000174077.8 ENSMUST00000174402.8 |
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CDS GCA 72 bp | CCGGTTTGGCTCAAGCTCAACACGATTGCACCTCCATaGCAGTCATTTTTCACCATTTTCCTTAGATTGTGG | + |
Preference number: 6 (lower is better) Translates to: PVWLKLNTIAPP*QSFFTIFLRLW Trigger: CCACAATCTAAGGAAAATGGTGAAAAATGACTGGCATGGAGGTGCAATCGTGTTGAGCTTGAGCCAAACCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000090938.11 ENSMUST00000173094.8 ENSMUST00000173135.8 ENSMUST00000174571.8 |
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CDS CCA 72 bp | CATAAAGAAGATATCGCACAGCTGGATGAGCAAAATTaGTATTTTTCAGGTAGCCCAGAAGCTCGAGAGCTG | + |
Preference number: 6 (lower is better) Translates to: HKEDIAQLDEQN*YFSGSPEAREL Trigger: CAGCTCTCGAGCTTCTGGGCTACCTGAAAAATACCAATTTTGCTCATCCAGCTGTGCGATATCTTCTTTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000090938.11 ENSMUST00000107491.11 ENSMUST00000172942.8 ENSMUST00000173021.8 ENSMUST00000173094.8 ENSMUST00000173135.8 ENSMUST00000174077.8 ENSMUST00000174402.8 ENSMUST00000174571.8 |