Pregenerated sensors for DAO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042096Ensembl transcript IDs: ENSMUST00000086599.11, ENSMUST00000112292.9, ENSMUST00000161610.6, ENSMUST00000199175.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGAATCACTaGACTGGAAGGACCAGGCAGCAGTGGATGAGTGGCAGGAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: AAYLTQALVRTSKNH*TGRTRQQWMSGRSS Trigger: GCTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR CCA 90 bp | CCGAAATCTGCCAAGTGGGTTGATGCTCTGCAGGATGCAGAACCATaGCTTCAGCCCGCAGTAGTGATCAGGACCAGGGACAGCTCCCAC | + |
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Preference number: 1 (lower is better) Translates to: PKSAKWVDALQDAEP*LQPAVVIRTRDSSH Trigger: GTGGGAGCTGTCCCTGGTCCTGATCACTACTGCGGGCTGAAGCCATGGTTCTGCATCCTGCAGAGCATCAACCCACTTGGCAGATTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199175.2 |
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| 3UTR TCA 90 bp | GTCCTGCCACCCGGTACCACCAGCCTCAGTACAGTCACTACGGCTTaGGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTT | + |
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Preference number: 1 (lower is better) Translates to: VLPPGTTSLSTVTTA*EELHHAAYLTQALV Trigger: AACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGACTGTACTGAGGCTGGTGGTACCGGGTGGCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR TCA 90 bp | GGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATaGGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: GPARITALEGPGSSG*VAGAARFPPFMPLP Trigger: TGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR TCA 90 bp | GGGTTCCACTCAGTGGTAGAGCACCTTAGAGCCTACTCTAAGGCCTaGGCCATACCCTCCTGCCTTTCCCCTCCTCTCACACATACAAGC | + |
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Preference number: 1 (lower is better) Translates to: GFHSVVEHLRAYSKA*AIPSCLSPPLTHTS Trigger: GCTTGTATGTGTGAGAGGAGGGGAAAGGCAGGAGGGTATGGCTCAGGCCTTAGAGTAGGCTCTAAGGTGCTCTACCACTGAGTGGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR GCA 90 bp | CCGGTACCACCAGCCTCAGTACAGTCACTACGGCTTGAGAAGAATTaGACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: PVPPASVQSLRLEKN*TTQPISPKPWLGPA Trigger: TGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGACTGTACTGAGGCTGGTGGTACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR CCA 90 bp | CAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATGAGTaGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: QQESLHWKDQAAVDE*QEQQDFLPSCLCQR Trigger: CCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR CCA 90 bp | CGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTaGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RLEKNCTTQPISPKP*LGPARITALEGPGS Trigger: GCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR CCA 90 bp | CACACGGTGATCACTAGAGTCCTCAGAGGTGGGAGGGAGGCAACCTaGACAACTTCTTTTCCTCTAGAATTTTCCCGAAGAGGTTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: HTVITRVLRGGREAT*TTSFPLEFSRRGWP Trigger: CGGCCAACCTCTTCGGGAAAATTCTAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCTCCCACCTCTGAGGACTCTAGTGATCACCGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| 3UTR CCA 90 bp | ATCCTGAAGAGTTTGGATATCCAGTGTTTTAATAATGTTGACCAGTaGAGTGCTCCTCCTCCAACTCCTCCTCCTCTCCCCAACGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: ILKSLDIQCFNNVDQ*SAPPPTPPPLPNVL Trigger: CAGGACGTTGGGGAGAGGAGGAGGAGTTGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATATCCAAACTCTTCAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR-3UTR CCA 90 bp | CACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTAGGACCAGGCAGCAGTaGATGAGTGGCAGGAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HYGLRRIAPRSLSHPSLGRTRQQ*MSGRSS Trigger: GCTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCT...ACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAACCATGGCTTCAGCCCGCAGTAGTGATCAGGACCAGGGACAGCTCCCATACTCTTTCTCACCTTaGTCCCTGGGATCGGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CRTMASARSSDQDQGQLPYSFSP*SLGSVP Trigger: AGGAACCGATCCCAGGGACCAAGGTGAGAAAGAGTA...TGGGAGCTGTCCCTGGTCCTGATCACTACTGCGGGCTGAAGCCATGGTTCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199175.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATGAGTGGCAGGAGCAGGACCATAGTTGTGGATaGCCTCTGCACTTGAAGATC | + |
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Preference number: 2 (lower is better) Translates to: QESLHWKDQAAVDEWQEQDHSCG*PLHLKI Trigger: GATCTTCAAGTGCAGAGGTCATCCACAACTATGGTC...CTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| 3UTR-3UTR CCA 90 bp | GAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGGGGAGGGAGGCAACCTaGACAACTTCTTTTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: EELHHAAYLTQALVRTSKGREAT*TTSFPL Trigger: TAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCTCCC...CTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| 3UTR-3UTR TCA 90 bp | AATTTTCCCGAAGAGGTTGGCCGCCTCCATTGCACAACCCCAGTGGATTGTGAGGATGACCTCTGCACTTaGAGATCCAAAATGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: NFPEEVGRLHCTTPVDCEDDLCT*RSKMKP Trigger: TGGCTTCATTTTGGATCTTCAAGTGCAGAGGTCATC...CTCACAATCCACTGGGGTTGTGCAATGGAGGCGGCCAACCTCTTCGGGAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGGATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCTCCTCCACCAGGCAGCAGTGGATaGGTGGCAGGAGCAGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SLDIQCFNNVDQWSAPPPPGSSG*VAGAAR Trigger: TCTTGCTGCTCCTGCCACTCATCCACTGCTGCCTGG...TGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATATCCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR-3UTR TCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCAACCCCAGTGGATTGTaGGCCCGTAACCTCCATGAC | + |
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Preference number: 2 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSNPSGL*ARNLHD Trigger: GTCATGGAGGTTACGGGCTCACAATCCACTGGGGTT...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| 3UTR-3UTR CCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCGCAGCAGTGGATGAGTaGCAGGAGCAGCAAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSAAVDE*QEQQDF Trigger: GAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGC...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR-3UTR CCA 90 bp | ATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCTCCTCCAACTCCTCCAAGAATCACTGCACTaGAAGGACCAGGCAGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: ISSVLIMLTSGVLLLQLLQESLH*KDQAAV Trigger: CACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTG...GAGGAGTTGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR CAA 90 bp | TCACACATACAAGCTAGATTAACTCTCCTCAAGGCCACAGTGTTCTaGGAGGTGGTGAGAATGAGGGGAAGTCATGTCTCAGGATCAATC | + |
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Preference number: 2 (lower is better) Translates to: SHIQARLTLLKATVF*EVVRMRGSHVSGSI Trigger: GATTGATCCTGAGACATGACTTCCCCTCATTCTCACCACCTCCAAGAACACTGTGGCCTTGAGGAGAGTTAATCTAGCTTGTATGTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR CAA 90 bp | GTGAGAATGAGGGGAAGTCATGTCTCAGGATCAATCCTGAAGAGTTaGGATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VRMRGSHVSGSILKS*DIQCFNNVDQWSAP Trigger: AGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATATCCAAACTCTTCAGGATTGATCCTGAGACATGACTTCCCCTCATTCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR-3UTR CAA 90 bp | TCAGACCTCAAGAGGACAGGGTTCCACTCAGTGGTAGAGCACCTTAGAGCCTACCCTCCCTTCATGCCTTaGCCAGAGGAAGCCAGGGGT | + |
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Preference number: 3 (lower is better) Translates to: SDLKRTGFHSVVEHLRAYPPFMP*PEEARG Trigger: ACCCCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGG...GTAGGCTCTAAGGTGCTCTACCACTGAGTGGAACCCTGTCCTCTTGAGGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR GCA 72 bp | CTCACCCAAGCCTTGGTTAGGACCAGCAAGAATCACTaGACTGGAAGGACCAGGCAGCAGTGGATGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: LTQALVRTSKNH*TGRTRQQWMSG Trigger: GCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR CCA 72 bp | TCACTGCACTGGAAGGACCAGGCAGCAGTGGATGAGTaGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTT | + |
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Preference number: 3 (lower is better) Translates to: SLHWKDQAAVDE*QEQQDFLPSCL Trigger: AAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR TCA 72 bp | AGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATaGGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATG | + |
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Preference number: 3 (lower is better) Translates to: RITALEGPGSSG*VAGAARFPPFM Trigger: CATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR GCA 72 bp | CCAGCCTCAGTACAGTCACTACGGCTTGAGAAGAATTaGACCACGCAGCCTATCTCACCCAAGCCTTGGTTA | + |
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Preference number: 3 (lower is better) Translates to: PASVQSLRLEKN*TTQPISPKPWL Trigger: TAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGACTGTACTGAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR-3UTR CAA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCGGTTGGCCGCCTCCATaGCACAACCCCAGTGGATTG | + |
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Preference number: 3 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSGWPPP*HNPSGL Trigger: CAATCCACTGGGGTTGTGCAATGGAGGCGGCCAACC...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| 3UTR CCA 72 bp | AGTTTGGATATCCAGTGTTTTAATAATGTTGACCAGTaGAGTGCTCCTCCTCCAACTCCTCCTCCTCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: SLDIQCFNNVDQ*SAPPPTPPPLP Trigger: GGGGAGAGGAGGAGGAGTTGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATATCCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| 3UTR-3UTR CAA 90 bp | CTCCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTATCTCACCCAAGCCTaGGTTAGGACCAGCAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: LPSLQIRMECVVNHSSEFYLTQA*VRTSKN Trigger: ATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATA...GAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR TCA 72 bp | TCCTCCCATCACTACAGATACGCATGGAGTGTGTTGTaGACCATTCGTCAGAGTTCTAAGCAAAAGATCCAG | + |
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Preference number: 3 (lower is better) Translates to: SSHHYRYAWSVL*TIRQSSKQKIQ Trigger: CTGGATCTTTTGCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| 3UTR TCA 72 bp | GAAGATATTCACTGTGTCCAAGGTGATATGTTTCTCTaGTTTCAGACCTCAAGAGGACAGGGTTCCACTCAG | + |
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Preference number: 3 (lower is better) Translates to: EDIHCVQGDMFL*FQTSRGQGSTQ Trigger: CTGAGTGGAACCCTGTCCTCTTGAGGTCTGAAATCAGAGAAACATATCACCTTGGACACAGTGAATATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| CDS-3UTR CCA 90 bp | GGGGGTGTCGTCTTGGGGCACACGGTGATCACTAGAGTCCTCAGAGGTGGGAGGCAAGGGGCCTCCACCTaGATGATCTGGCCCCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GGVVLGHTVITRVLRGGRQGAST*MIWPRP Trigger: AGGCCGGGGCCAGATCATCCAGGTGGAGGCCCCTTG...CCTCCCACCTCTGAGGACTCTAGTGATCACCGTGTGCCCCAAGACGACACCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
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| CDS-3UTR CCA 90 bp | GTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGGATCTGGCCCCGGCCTaGCTGCAGGGAGGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: VDEWQEQQDFLPSCLCQRDLAPA*LQGGIC Trigger: GCAGATGCCTCCCTGCAGCCAGGCCGGGGCCAGATC...CCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR CCA 90 bp | AGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGGGTGGTCCACCTGGATGATCTaGCCCCGGCCTGGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RSSKISSLHAFARGSQGWSTWMI*PRPGCR Trigger: CCTGCAGCCAGGCCGGGGCCAGATCATCCAGGTGGA...CCACCCCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR GCA 90 bp | CACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTAGGGAGGCATCTGCTTaGAGGGCCCCGGCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: HYGLRRIAPRSLSHPSLGREASA*RAPAHT Trigger: GGTGTGGGCCGGGGCCCTGCAAGCAGATGCCTCCCT...ACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR GCA 90 bp | CAGTCACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTAGGGAGGCATCTGCTTaGAGGGCCCCGGCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: QSLRLEKNCTTQPISPKPREASA*RAPAHT Trigger: GGTGTGGGCCGGGGCCCTGCAAGCAGATGCCTCCCT...AGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR CCA 90 bp | GCAGCAGTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCTCCACCTGGATGATCTaGCCCCGGCCTGGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AAVDEWQEQQDFLPSCLCSTWMI*PRPGCR Trigger: CCTGCAGCCAGGCCGGGGCCAGATCATCCAGGTGGA...GCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR TCA 90 bp | GCCTTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGCTGTGGAGAGCCCAATaGCTCCTGCTCCGATCACGG | + |
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Preference number: 4 (lower is better) Translates to: ALVRTSKNHCTGRTRQQWLWRAQ*LLLRSR Trigger: CCGTGATCGGAGCAGGAGTCATTGGGCTCTCCACAG...CCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR TCA 90 bp | CCTCAAGGCCACAGTGTTCTTGGAGGTGGTGAGAATGAGGGGAAGTCATGTCTCCTCCACTCCGCCTCCTaGGGGTTGCTGGGGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: PQGHSVLGGGENEGKSCLLHSAS*GLLGSE Trigger: CTCTGACCCCAGCAACCCTCAGGAGGCGGAGTGGAG...GAGACATGACTTCCCCTCATTCTCACCACCTCCAAGAACACTGTGGCCTTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| CDS-3UTR TCA 90 bp | TCAGACCTCAAGAGGACAGGGTTCCACTCAGTGGTAGAGCACCTTAGAGCCTACCTTTCTAGCCGGACCTaGGGCCGGACTGGCCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: SDLKRTGFHSVVEHLRAYLSSRT*GRTGRK Trigger: CTTCCGGCCAGTCCGGCCTCAGGTCCGGCTAGAAAG...GTAGGCTCTAAGGTGCTCTACCACTGAGTGGAACCCTGTCCTCTTGAGGTCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| CDS-3UTR TCA 90 bp | GATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCTTTCTAGCCGGACCTaGGGCCGGACTGGCCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: DEWQEQQDFLPSCLCQRKLSSRT*GRTGRK Trigger: CTTCCGGCCAGTCCGGCCTCAGGTCCGGCTAGAAAG...CTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR GCA 90 bp | CTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAAGGGAGGCATCTGCTTaGAGGGCCCCGGCCCACACC | + |
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Preference number: 4 (lower is better) Translates to: LEKNCTTQPISPKPWLGPREASA*RAPAHT Trigger: GGTGTGGGCCGGGGCCCTGCAAGCAGATGCCTCCCT...TGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR CCA 90 bp | CTCAAGGCCACAGTGTTCTTGGAGGTGGTGAGAATGAGGGGAAGTCATGTCTCAGATCTGGCCCCGGCCTaGCTGCAGGGAGGCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: LKATVFLEVVRMRGSHVSDLAPA*LQGGIC Trigger: GCAGATGCCTCCCTGCAGCCAGGCCGGGGCCAGATC...TGAGACATGACTTCCCCTCATTCTCACCACCTCCAAGAACACTGTGGCCTTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
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| CDS-3UTR CCA 90 bp | GCAGCAGTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCGACCTGAGGCCGGACTaGCCGGAAGCCAGTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AAVDEWQEQQDFLPSCLCDLRPD*PEASEF Trigger: GAACTCACTGGCTTCCGGCCAGTCCGGCCTCAGGTC...GCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS-3UTR TCA 90 bp | CACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGAATCACTGCCTGTGGAGAGCCCAATaGCTCCTGCTCCGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HHAAYLTQALVRTSKNHCLWRAQ*LLLRSR Trigger: CCGTGATCGGAGCAGGAGTCATTGGGCTCTCCACAG...GCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | TGCAGAACCATGGCTTCAGCCCGCAGTAGTGATCAGGACCAGGGACAGCTCCCAACAGGTCCATCTCACTaGGGGTCAGCTTCCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: CRTMASARSSDQDQGQLPTGPSH*GSASGI Trigger: GATTCCGGAAGCTGACCCCCAGTGAGATGGACCTGT...TGGGAGCTGTCCCTGGTCCTGATCACTACTGCGGGCTGAAGCCATGGTTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199175.2 |
||
| CDS-3UTR TCA 90 bp | CAGTCACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTCTGTGGAGAGCCCAATaGCTCCTGCTCCGATCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QSLRLEKNCTTQPISPKPLWRAQ*LLLRSR Trigger: CCGTGATCGGAGCAGGAGTCATTGGGCTCTCCACAG...AGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | GTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGAACCCCAGTGGATTGTaGGCCCGTAACCTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAGAARFPPFMPLPEEARNPSGL*ARNLHD Trigger: GTCATGGAGGTTACGGGCTCACAATCCACTGGGGTT...CCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGCCTCCTGAGGGTTGCTaGGGTCAGAGAGATAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VAGAARFPPFMPLPEEARPPEGC*GQRDKA Trigger: AGCCTTATCTCTCTGACCCCAGCAACCCTCAGGAGG...CCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGGACAGGTCCATCTCACTaGGGGTCAGCTTCCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: WQEQQDFLPSCLCQRKPGTGPSH*GSASGI Trigger: GATTCCGGAAGCTGACCCCCAGTGAGATGGACCTGT...CCCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | GTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGGGTAACGCTCATGAATaGAGAGGGCTGTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VDEWQEQQDFLPSCLCQRGNAHE*RGLWRA Trigger: GGCTCTCCACAGCCCTCTGCATTCATGAGCGTTACC...CCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | CACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGAATCACTGCGGTAACGCTCATGAATaGAGAGGGCTGTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HHAAYLTQALVRTSKNHCGNAHE*RGLWRA Trigger: GGCTCTCCACAGCCCTCTGCATTCATGAGCGTTACC...GCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATGAGTGGCAGGAGCAGGACTCCACCTTCCGATaGATAAGCTTCACTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QESLHWKDQAAVDEWQEQDSTFR*ISFTPL Trigger: GAGGGGAGTGAAGCTTATCCATCGGAAGGTGGAGTC...CTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAGATCTGGCCCCGGCCTaGCTGCAGGGAGGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PITTDTHGVCCEPFVRVLDLAPA*LQGGIC Trigger: GCAGATGCCTCCCTGCAGCCAGGCCGGGGCCAGATC...TAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGCAACCTGGACAACTTCTTTTCCTCTAGAATTTTCCCGAAGAGGTTGGTCCACCTGGATGATCTaGCCCCGGCCTGGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REATWTTSFPLEFSRRGWSTWMI*PRPGCR Trigger: CCTGCAGCCAGGCCGGGGCCAGATCATCCAGGTGGA...CCAACCTCTTCGGGAAAATTCTAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS-3UTR CCA 90 bp | GAGGCAACCTGGACAACTTCTTTTCCTCTAGAATTTTCCCGAAGAGGTTGGCCGGACCTGAGGCCGGACTaGCCGGAAGCCAGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EATWTTSFPLEFSRRGWPDLRPD*PEASEF Trigger: GAACTCACTGGCTTCCGGCCAGTCCGGCCTCAGGTC...CGGCCAACCTCTTCGGGAAAATTCTAGAGGAAAAGAAGTTGTCCAGGTTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| 3UTR CAA 72 bp | ACCCGGTACCACCAGCCTCAGTACAGTCACTACGGCTaGAGAAGAATTGCACCACGCAGCCTATCTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRYHQPQYSHYG*RRIAPRSLSHP Trigger: TGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTGACTGTACTGAGGCTGGTGGTACCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | CCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTACTCCACTCCGCCTCCTaGGGGTTGCTGGGGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PITTDTHGVCCEPFVRVLLHSAS*GLLGSE Trigger: CTCTGACCCCAGCAACCCTCAGGAGGCGGAGTGGAG...TAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | GAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGAACCCCAGTGGATTGTaGGCCCGTAACCTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: EELHHAAYLTQALVRTSKNPSGL*ARNLHD Trigger: GTCATGGAGGTTACGGGCTCACAATCCACTGGGGTT...CTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCACATCCACTCCTCTTaGCACCTCTTCGAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: AAVDEWQEQQDFLPSCLCHIHSS*HLFERL Trigger: GAGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGTG...GCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGGGTGCAGTGGCTGTGTTaGGTGGTAACGCTCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: WQEQQDFLPSCLCQRKPGVQWLC*VVTLMN Trigger: ATTCATGAGCGTTACCACCCAACACAGCCACTGCAC...CCCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGACAGGTCCATCTCACTaGGGGTCAGCTTCCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: EELHHAAYLTQALVRTSKTGPSH*GSASGI Trigger: GATTCCGGAAGCTGACCCCCAGTGAGATGGACCTGT...CTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGGGGAGGGAGGCAACCTaGACAACTTCTTTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALVRTSKNHCTGRTRQQWGREAT*TTSFPL Trigger: TAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCTCCC...CCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | AAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGACTGGCCGGAAGCCAGTaGGTTCACCCACAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNCTTQPISPKPWLGPARLAGSQ*VHPQFL Trigger: CAAGAATTGTGGGTGAACTCACTGGCTTCCGGCCAG...TCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | GCCTTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGCGGGGTGAATCGATCTaGATAGATCTTCATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALVRTSKNHCTGRTRQQWRGESI*IDLHVQ Trigger: CTGCACATGAAGATCTATGCAGATCGATTCACCCCG...CCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | GGCCACAGTGTTCTTGGAGGTGGTGAGAATGAGGGGAAGTCATGTCTCAGGATCCACATCCACTCCTCTTaGCACCTCTTCGAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GHSVLGGGENEGKSCLRIHIHSS*HLFERL Trigger: GAGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGTG...GATCCTGAGACATGACTTCCCCTCATTCTCACCACCTCCAAGAACACTGTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCGTGCAGTGGCTGTGTTaGGTGGTAACGCTCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AAVDEWQEQQDFLPSCLCVQWLC*VVTLMN Trigger: ATTCATGAGCGTTACCACCCAACACAGCCACTGCAC...GCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTGACTCCACCTTCCGATaGATAAGCTTCACTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HYGLRRIAPRSLSHPSLGDSTFR*ISFTPL Trigger: GAGGGGAGTGAAGCTTATCCATCGGAAGGTGGAGTC...ACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCCAAGGGGCCTCCACCTaGATGATCTGGCCCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSQGAST*MIWPRP Trigger: AGGCCGGGGCCAGATCATCCAGGTGGAGGCCCCTTG...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAGACCTGAGGCCGGACTaGCCGGAAGCCAGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PITTDTHGVCCEPFVRVLDLRPD*PEASEF Trigger: GAACTCACTGGCTTCCGGCCAGTCCGGCCTCAGGTC...TAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| 3UTR CAA 72 bp | GAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTaGGTTAGGACCAGCAAGAATCACTGCACTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EELHHAAYLTQA*VRTSKNHCTGR Trigger: CCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCGACCATAGTTGTGGATaGCCTCTGCACTTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AAVDEWQEQQDFLPSCLCDHSCG*PLHLKI Trigger: GATCTTCAAGTGCAGAGGTCATCCACAACTATGGTC...GCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCACTGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | GTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGGACCATAGTTGTGGATaGCCTCTGCACTTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: VDEWQEQQDFLPSCLCQRDHSCG*PLHLKI Trigger: GATCTTCAAGTGCAGAGGTCATCCACAACTATGGTC...CCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | CACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGAATCACTGCTTCACCCACAATTCTTaGATTCTTCAGGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHAAYLTQALVRTSKNHCFTHNS*ILQGGL Trigger: GAGCCCACCCTGAAGAATGCAAGAATTGTGGGTGAA...GCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GGCCACAGTGTTCTTGGAGGTGGTGAGAATGAGGGGAAGTCATGTCTCAGGATCGTGCAGTGGCTGTGTTaGGTGGTAACGCTCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GHSVLGGGENEGKSCLRIVQWLC*VVTLMN Trigger: ATTCATGAGCGTTACCACCCAACACAGCCACTGCAC...GATCCTGAGACATGACTTCCCCTCATTCTCACCACCTCCAAGAACACTGTGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTGGATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCTCCTCCACAAGGGGCCTCCACCTaGATGATCTGGCCCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLDIQCFNNVDQWSAPPPQGAST*MIWPRP Trigger: AGGCCGGGGCCAGATCATCCAGGTGGAGGCCCCTTG...TGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATATCCAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
||
| CDS-3UTR CCA 90 bp | GCCTTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGCCAAGGCTAGGATCATaGGTGAGGATGAAGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ALVRTSKNHCTGRTRQQWPRLGS*VRMKCL Trigger: TAAACACTTCATCCTCACCCATGATCCTAGCCTTGG...CCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | AGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGGGTGGAACTGTCTTGGAACCTaGGATGATGTACGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSSKISSLHAFARGSQGWNCLGT*DDVRRV Trigger: AACTCTCCGTACATCATCCCAGGTTCCAAGACAGTT...CCACCCCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGAGCAGCTCTTCCAAATaGTATTGTGGTCACGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: DEWQEQQDFLPSCLCQRKSSSSK*YCGHGR Trigger: GCGTCCGTGACCACAATACCATTTGGAAGAGCTGCT...CTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGTTGCATTCTTCAGGGTaGGCTCCAGTTTACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EELHHAAYLTQALVRTSKLHSSG*APVYSS Trigger: GCTGCTGTAAACTGGAGCCCACCCTGAAGAATGCAA...CTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGGGGAGGGAGGCAACCTaGACAACTTCTTTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DEWQEQQDFLPSCLCQRKGREAT*TTSFPL Trigger: TAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCTCCC...CTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | CACCACGCAGCCTATCTCACCCAAGCCTTGGTTAGGACCAGCAAGAATCACTGCGATGACCTCTGCACTTaGAGATCCAAAATGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HHAAYLTQALVRTSKNHCDDLCT*RSKMKP Trigger: TGGCTTCATTTTGGATCTTCAAGTGCAGAGGTCATC...GCAGTGATTCTTGCTGGTCCTAACCAAGGCTTGGGTGAGATAGGCTGCGTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | GATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGTTCACCCACAATTCTTaGATTCTTCAGGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DEWQEQQDFLPSCLCQRKFTHNS*ILQGGL Trigger: GAGCCCACCCTGAAGAATGCAAGAATTGTGGGTGAA...CTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GTGGATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGCCAAGGCTAGGATCATaGGTGAGGATGAAGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VDEWQEQQDFLPSCLCQRPRLGS*VRMKCL Trigger: TAAACACTTCATCCTCACCCATGATCCTAGCCTTGG...CCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCCAGGGCAATTCTTGCATTCCTaGGATGATGTACGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WQEQQDFLPSCLCQRKPGQFLHS*DDVRRV Trigger: AACTCTCCGTACATCATCCCAGGAATGCAAGAATTG...CCCTGGCTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS-3UTR TCA 90 bp | GATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGGATGACCTCTGCACTTaGAGATCCAAAATGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DEWQEQQDFLPSCLCQRKDDLCT*RSKMKP Trigger: TGGCTTCATTTTGGATCTTCAAGTGCAGAGGTCATC...CTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | CCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAGGTAACGCTCATGAATaGAGAGGGCTGTGGAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PITTDTHGVCCEPFVRVLGNAHE*RGLWRA Trigger: GGCTCTCCACAGCCCTCTGCATTCATGAGCGTTACC...TAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | GAGGGAGGCAACCTGGACAACTTCTTTTCCTCTAGAATTTTCCCGAAGAGGTTGGACTCCACCTTCCGATaGATAAGCTTCACTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGGNLDNFFSSRIFPKRLDSTFR*ISFTPL Trigger: GAGGGGAGTGAAGCTTATCCATCGGAAGGTGGAGTC...CAACCTCTTCGGGAAAATTCTAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS-3UTR TCA 90 bp | AGTCCTCAGAGGTGGGAGGGAGGCAACCTGGACAACTTCTTTTCCTCTAGAATTCTTGCATTCCTGGGATaGTGTACGGAGAGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPQRWEGGNLDNFFSSRILAFLG*CTESCR Trigger: TCTACAACTCTCCGTACATCATCCCAGGAATGCAAG...AATTCTAGAGGAAAAGAAGTTGTCCAGGTTGCCTCCCTCCCACCTCTGAGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS-3UTR TCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCCTGGCCGGAAGCCAGTaGGTTCACCCACAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSLAGSQ*VHPQFL Trigger: CAAGAATTGTGGGTGAACTCACTGGCTTCCGGCCAG...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | ATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCTCCTCCAACTCCTCCTGGCCGGAAGCCAGTaGGTTCACCCACAATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLIMLTSGVLLLQLLLAGSQ*VHPQFL Trigger: CAAGAATTGTGGGTGAACTCACTGGCTTCCGGCCAG...GAGGAGTTGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | TTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATGTTCACCCACAATTCTTaGATTCCTGGGATGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVRTSKNHCTGRTRQQWMFTHNS*IPGMMY Trigger: GTACATCATCCCAGGAATGCAAGAATTGTGGGTGAA...CATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS-3UTR CCA 90 bp | TCTACTACTCTTTCTCACCTTGGTCCCTGGGATCGGTTCCTTCTCAAAGGAAGAGTGCAGTGGCTGTGTTaGGTGGTAACGCTCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: STTLSHLGPWDRFLLKGRVQWLC*VVTLMN Trigger: ATTCATGAGCGTTACCACCCAACACAGCCACTGCAC...TCTTCCTTTGAGAAGGAACCGATCCCAGGGACCAAGGTGAGAAAGAGTAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199175.2 |
||
| CDS-3UTR CCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCACAGGTCCATCTCACTaGGGGTCAGCTTCCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSTGPSH*GSASGI Trigger: GATTCCGGAAGCTGACCCCCAGTGAGATGGACCTGT...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CTCCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCAGCAGCTCTTCCAAATaGTATTGTGGTCACGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLQIRMECVVNHSSEFSSSSK*YCGHGR Trigger: GCGTCCGTGACCACAATACCATTTGGAAGAGCTGCT...GAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR TCA 90 bp | TCAGACCTCAAGAGGACAGGGTTCCACTCAGTGGTAGAGCACCTTAGAGCCTACCTTGAAGATCCAAAATaGAGCCATTCTCTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLKRTGFHSVVEHLRAYLEDPK*SHSLSS Trigger: GCTAGAAAGAGAATGGCTTCATTTTGGATCTTCAAG...GTAGGCTCTAAGGTGCTCTACCACTGAGTGGAACCCTGTCCTCTTGAGGTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
||
| CDS-3UTR TCA 90 bp | GATGAGTGGCAGGAGCAGCAAGATTTCCTCCCTTCATGCCTTTGCCAGAGGAAGCTTGAAGATCCAAAATaGAGCCATTCTCTTTCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DEWQEQQDFLPSCLCQRKLEDPK*SHSLSS Trigger: GCTAGAAAGAGAATGGCTTCATTTTGGATCTTCAAG...CTTCCTCTGGCAAAGGCATGAAGGGAGGAAATCTTGCTGCTCCTGCCACTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR GCA 90 bp | ATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCTCCTCCAACTCCTCCACATCCACTCCTCTTaGCACCTCTTCGAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSVLIMLTSGVLLLQLLHIHSS*HLFERL Trigger: GAGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGTG...GAGGAGTTGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTATTGCATTCTTCAGGGTaGGCTCCAGTTTACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PITTDTHGVCCEPFVRVLLHSSG*APVYSS Trigger: GCTGCTGTAAACTGGAGCCCACCCTGAAGAATGCAA...TAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CCA 90 bp | CTCCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCCCAAGGCTAGGATCATaGGTGAGGATGAAGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSLQIRMECVVNHSSEFPRLGS*VRMKCL Trigger: TAAACACTTCATCCTCACCCATGATCCTAGCCTTGG...GAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| 3UTR CAA 72 bp | AGCATAAAGTATAACAACCGAAATCTGCCAAGTGGGTaGATGCTCTGCAGGATGCAGAACCATGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SIKYNNRNLPSG*MLCRMQNHGFS Trigger: GCTGAAGCCATGGTTCTGCATCCTGCAGAGCATCAACCCACTTGGCAGATTTCGGTTGTTATACTTTATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199175.2 |
||
| CDS-3UTR GCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCCGGGGTGAATCGATCTaGATAGATCTTCATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSRGESI*IDLHVQ Trigger: CTGCACATGAAGATCTATGCAGATCGATTCACCCCG...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| 3UTR CAA 72 bp | CTTCAGTTTGGAGTTTGTCTACTACTCTTTCTCACCTaGGTCCCTGGGATCGGTTCCTTCTCAAAGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQFGVCLLLFLT*VPGIGSFSKED Trigger: ATCTTCCTTTGAGAAGGAACCGATCCCAGGGACCAAGGTGAGAAAGAGTAGTAGACAAACTCCAAACTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199175.2 |
||
| CDS-3UTR CCA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCAACTGTCTTGGAACCTaGGATGATGTACGGAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSNCLGT*DDVRRV Trigger: AACTCTCCGTACATCATCCCAGGTTCCAAGACAGTT...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| 3UTR CAA 72 bp | AGGGGAAGTCATGTCTCAGGATCAATCCTGAAGAGTTaGGATATCCAGTGTTTTAATAATGTTGACCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSHVSGSILKS*DIQCFNNVDQW Trigger: CCACTGGTCAACATTATTAAAACACTGGATATCCAAACTCTTCAGGATTGATCCTGAGACATGACTTCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
||
| CDS CCA 90 bp | GGTAATCAAACGTTTGCTGGCTCCACTCCGCCTCCTGAGGGTTGCTaGGGTCAGAGAGATAAGGCTGCCAGAGGCCGGCGGCCACATCGC | + |
|
Preference number: 5 (lower is better) Translates to: GNQTFAGSTPPPEGC*GQRDKAARGRRPHR Trigger: GCGATGTGGCCGCCGGCCTCTGGCAGCCTTATCTCTCTGACCCCAGCAACCCTCAGGAGGCGGAGTGGAGCCAGCAAACGTTTGATTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
||
| CDS GCA 90 bp | GCAGGTAATCAAACGTTTGCTGGCTCCACTCCGCCTCCTGAGGGTTaGTGGGGTCAGAGAGATAAGGCTGCCAGAGGCCGGCGGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: AGNQTFAGSTPPPEG*WGQRDKAARGRRPH Trigger: ATGTGGCCGCCGGCCTCTGGCAGCCTTATCTCTCTGACCCCAGCAACCCTCAGGAGGCGGAGTGGAGCCAGCAAACGTTTGATTACCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
||
| CDS-3UTR CAA 90 bp | CACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTCAGGGAGGCATCTGCTaGCAGGGCCCCGGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: HYGLRRIAPRSLSHPSLGQGGIC*QGPGPH Trigger: GTGTGGGCCGGGGCCCTGCAAGCAGATGCCTCCCTG...ACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CAA 90 bp | GGGGGTGTCGTCTTGGGGCACACGGTGATCACTAGAGTCCTCAGAGGTGGGAGGTCACATCCACTCCTCTaGCCACCTCTTCGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: GGVVLGHTVITRVLRGGRSHPLL*PPLRET Trigger: AGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGTGA...CCTCCCACCTCTGAGGACTCTAGTGATCACCGTGTGCCCCAAGACGACACCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS-3UTR CAA 90 bp | GCCTTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGGGTTGGCCGCCTCCATaGCACAACCCCAGTGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: ALVRTSKNHCTGRTRQQWGWPPP*HNPSGL Trigger: CAATCCACTGGGGTTGTGCAATGGAGGCGGCCAACC...CCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CAA 90 bp | CTCCCATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCCAGGGAGGCATCTGCTaGCAGGGCCCCGGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSLQIRMECVVNHSSEFQGGIC*QGPGPH Trigger: GTGTGGGCCGGGGCCCTGCAAGCAGATGCCTCCCTG...GAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGATGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS TCA 90 bp | ATTCTCTTTCTAGCCGGACCTGAGGCCGGACTGGCCGGAAGCCAGTaGGTTCACCCACAATTCTTGCATTCTTCAGGGTGGGCTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILFLAGPEAGLAGSQ*VHPQFLHSSGWAPV Trigger: AACTGGAGCCCACCCTGAAGAATGCAAGAATTGTGGGTGAACTCACTGGCTTCCGGCCAGTCCGGCCTCAGGTCCGGCTAGAAAGAGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CAA 90 bp | CAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATGAGTGGCAGGAGCAGGTTCACCCACAATTCTaGCATTCTTCAGGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QESLHWKDQAAVDEWQEQVHPQF*HSSGWA Trigger: AGCCCACCCTGAAGAATGCAAGAATTGTGGGTGAAC...CTGCTCCTGCCACTCATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS GCA 90 bp | GAACAGGTCCATCTCACTGGGGGTCAGCTTCCGGAATCCCAGAACTaGGTTTTTCCAGAAAGGGTCCGGAACTTCATCTCGGAAGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EQVHLTGGQLPESQN*VFPERVRNFISEEV Trigger: AACCTCTTCCGAGATGAAGTTCCGGACCCTTTCTGGAAAAACGCAGTTCTGGGATTCCGGAAGCTGACCCCCAGTGAGATGGACCTGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
||
| CDS CCA 90 bp | CGGGGTGAATCGATCTGCATAGATCTTCATGTGCAGTGGCTGTGTTaGGTGGTAACGCTCATGAATGCAGAGGGCTGTGGAGAGCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RGESICIDLHVQWLC*VVTLMNAEGCGEPN Trigger: ATTGGGCTCTCCACAGCCCTCTGCATTCATGAGCGTTACCACCCAACACAGCCACTGCACATGAAGATCTATGCAGATCGATTCACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS CCA 90 bp | CGTGGTGAACGGGGTGAATCGATCTGCATAGATCTTCATGTGCAGTaGCTGTGTTGGGTGGTAACGCTCATGAATGCAGAGGGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGERGESICIDLHVQ*LCWVVTLMNAEGCG Trigger: TCCACAGCCCTCTGCATTCATGAGCGTTACCACCCAACACAGCCACTGCACATGAAGATCTATGCAGATCGATTCACCCCGTTCACCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS CCA 90 bp | TTCAGGGTGGGCTCCAGTTTACAGCAGCTCTTCCAAATGGTATTGTaGTCACGGACGCTGTTTAACCCGCTCCAGTTCCCCAGCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FRVGSSLQQLFQMVL*SRTLFNPLQFPSWN Trigger: ATTCCAGCTGGGGAACTGGAGCGGGTTAAACAGCGTCCGTGACCACAATACCATTTGGAAGAGCTGCTGTAAACTGGAGCCCACCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CAA 90 bp | TTGGTTAGGACCAGCAAGAATCACTGCACTGGAAGGACCAGGCAGCAGTGGATGTCACATCCACTCCTCTaGCCACCTCTTCGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LVRTSKNHCTGRTRQQWMSHPLL*PPLRET Trigger: AGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGTGA...CATCCACTGCTGCCTGGTCCTTCCAGTGCAGTGATTCTTGCTGGTCCTAACCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CAA 90 bp | CACTACGGCTTGAGAAGAATTGCACCACGCAGCCTATCTCACCCAAGCCTTGGTTCACATCCACTCCTCTaGCCACCTCTTCGAGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HYGLRRIAPRSLSHPSLGSHPLL*PPLRET Trigger: AGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGTGA...ACCAAGGCTTGGGTGAGATAGGCTGCGTGGTGCAATTCTTCTCAAGCCGTAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS TCA 90 bp | TTAGCCATGGCAGGTAGCTCTTCCCCTCTAGAAGGAGGCTTGTATTaGACCAGCCGTAGCCATAATCAGGGAACAGGTCCATCTCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAMAGSSSPLEGGLY*TSRSHNQGTGPSHW Trigger: CCAGTGAGATGGACCTGTTCCCTGATTATGGCTACGGCTGGTTCAATACAAGCCTCCTTCTAGAGGGGAAGAGCTACCTGCCATGGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
||
| CDS CCA 90 bp | TTGCATTCTTCAGGGTGGGCTCCAGTTTACAGCAGCTCTTCCAAATaGTATTGTGGTCACGGACGCTGTTTAACCCGCTCCAGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LHSSGWAPVYSSSSK*YCGHGRCLTRSSSP Trigger: TGGGGAACTGGAGCGGGTTAAACAGCGTCCGTGACCACAATACCATTTGGAAGAGCTGCTGTAAACTGGAGCCCACCCTGAAGAATGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS CCA 90 bp | ACATCCACTCCTCTTGCCACCTCTTCGAGAGACTCCACCTTCCGATaGATAAGCTTCACTCCCCTCTCAGTTAACCTCTCAGTTAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSTPLATSSRDSTFR*ISFTPLSVNLSVSH Trigger: ATGGCTAACTGAGAGGTTAACTGAGAGGGGAGTGAAGCTTATCCATCGGAAGGTGGAGTCTCTCGAAGAGGTGGCAAGAGGAGTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS CCA 90 bp | GTTCCCCAGCTGGAATATACCCCCGAGCGTAACTGTCTTGGAACCTaGGATGATGTACGGAGAGTTGTAGATACCAAGGCTAGGATCATG | + |
|
Preference number: 5 (lower is better) Translates to: VPQLEYTPERNCLGT*DDVRRVVDTKARIM Trigger: CATGATCCTAGCCTTGGTATCTACAACTCTCCGTACATCATCCCAGGTTCCAAGACAGTTACGCTCGGGGGTATATTCCAGCTGGGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS-3UTR CAA 90 bp | AGTTTGGATATCCAGTGTTTTAATAATGTTGACCAGTGGAGTGCTCCTCCTCCAGGTTGGCCGCCTCCATaGCACAACCCCAGTGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLDIQCFNNVDQWSAPPPGWPPP*HNPSGL Trigger: CAATCCACTGGGGTTGTGCAATGGAGGCGGCCAACC...TGGAGGAGGAGCACTCCACTGGTCAACATTATTAAAACACTGGATATCCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112292.9 |
||
| CDS-3UTR CAA 90 bp | ATCACTACAGATACGCATGGAGTGTGTTGTGAACCATTCGTCAGAGTTCTAAGCGTTCACCCACAATTCTaGCATTCTTCAGGGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITTDTHGVCCEPFVRVLSVHPQF*HSSGWA Trigger: AGCCCACCCTGAAGAATGCAAGAATTGTGGGTGAAC...GCTTAGAACTCTGACGAATGGTTCACAACACACTCCATGCGTATCTGTAGTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS CAA 72 bp | TCTGCTTGCAGGGCCCCGGCCCACACCCCGGTGCAGTaGATAATCACATCCACTCCTCTTGCCACCTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SACRAPAHTPVQ*IITSTPLATSS Trigger: CGAAGAGGTGGCAAGAGGAGTGGATGTGATTATCAACTGCACCGGGGTGTGGGCCGGGGCCCTGCAAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS TCA 72 bp | CTAGCCGGACCTGAGGCCGGACTGGCCGGAAGCCAGTaGGTTCACCCACAATTCTTGCATTCTTCAGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAGPEAGLAGSQ*VHPQFLHSSGW Trigger: CCACCCTGAAGAATGCAAGAATTGTGGGTGAACTCACTGGCTTCCGGCCAGTCCGGCCTCAGGTCCGGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
||
| CDS TCA 72 bp | CTAGCCGGACCTGAGGCCGGACTGGCCGGAAGCCAGTaGGTTCACCCACAATTCTTGCATTCCTGGGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LAGPEAGLAGSQ*VHPQFLHSWDD Trigger: ATCATCCCAGGAATGCAAGAATTGTGGGTGAACTCACTGGCTTCCGGCCAGTCCGGCCTCAGGTCCGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086599.11 |
||
| CDS GCA 72 bp | GGCCACATCGCTCGTGGTGAACGGGGTGAATCGATCTaGATAGATCTTCATGTGCAGTGGCTGTGTTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GHIARGERGESI*IDLHVQWLCWV Trigger: CACCCAACACAGCCACTGCACATGAAGATCTATGCAGATCGATTCACCCCGTTCACCACGAGCGATGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
||
| CDS CCA 72 bp | TCACGGACGCTGTTTAACCCGCTCCAGTTCCCCAGCTaGAATATACCCCCGAGCGTAACTGTCTTGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: SRTLFNPLQFPS*NIPPSVTVLEP Trigger: AGGTTCCAAGACAGTTACGCTCGGGGGTATATTCCAGCTGGGGAACTGGAGCGGGTTAAACAGCGTCCGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS CAA 90 bp | TTCTTCAGGGTGGGCTCCAGTTTACAGCAGCTCTTCCAAATGGTATaGTGGTCACGGACGCTGTTTAACCCGCTCCAGTTCCCCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: FFRVGSSLQQLFQMV*WSRTLFNPLQFPSW Trigger: CCAGCTGGGGAACTGGAGCGGGTTAAACAGCGTCCGTGACCACAATACCATTTGGAAGAGCTGCTGTAAACTGGAGCCCACCCTGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS GCA 72 bp | CATCTCACTGGGGGTCAGCTTCCGGAATCCCAGAACTaGGTTTTTCCAGAAAGGGTCCGGAACTTCATCTCG | + |
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Preference number: 6 (lower is better) Translates to: HLTGGQLPESQN*VFPERVRNFIS Trigger: CGAGATGAAGTTCCGGACCCTTTCTGGAAAAACGCAGTTCTGGGATTCCGGAAGCTGACCCCCAGTGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
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| CDS CCA 72 bp | AGCCGTAGCCATAATCAGGGAACAGGTCCATCTCACTaGGGGTCAGCTTCCGGAATCCCAGAACTGCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SRSHNQGTGPSH*GSASGIPELRF Trigger: AAAACGCAGTTCTGGGATTCCGGAAGCTGACCCCCAGTGAGATGGACCTGTTCCCTGATTATGGCTACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
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| CDS CCA 72 bp | TCAGGGTGGGCTCCAGTTTACAGCAGCTCTTCCAAATaGTATTGTGGTCACGGACGCTGTTTAACCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGWAPVYSSSSK*YCGHGRCLTRS Trigger: GGAGCGGGTTAAACAGCGTCCGTGACCACAATACCATTTGGAAGAGCTGCTGTAAACTGGAGCCCACCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS TCA 72 bp | GCAGGTAGCTCTTCCCCTCTAGAAGGAGGCTTGTATTaGACCAGCCGTAGCCATAATCAGGGAACAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AGSSSPLEGGLY*TSRSHNQGTGP Trigger: TGGACCTGTTCCCTGATTATGGCTACGGCTGGTTCAATACAAGCCTCCTTCTAGAGGGGAAGAGCTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 ENSMUST00000199175.2 |
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| CDS CCA 72 bp | CCTCTTGCCACCTCTTCGAGAGACTCCACCTTCCGATaGATAAGCTTCACTCCCCTCTCAGTTAACCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PLATSSRDSTFR*ISFTPLSVNLS Trigger: TGAGAGGTTAACTGAGAGGGGAGTGAAGCTTATCCATCGGAAGGTGGAGTCTCTCGAAGAGGTGGCAAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS CAA 72 bp | GTGGGCTCCAGTTTACAGCAGCTCTTCCAAATGGTATaGTGGTCACGGACGCTGTTTAACCCGCTCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: VGSSLQQLFQMV*WSRTLFNPLQF Trigger: GAACTGGAGCGGGTTAAACAGCGTCCGTGACCACAATACCATTTGGAAGAGCTGCTGTAAACTGGAGCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS CCA 72 bp | TCGATCTGCATAGATCTTCATGTGCAGTGGCTGTGTTaGGTGGTAACGCTCATGAATGCAGAGGGCTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SICIDLHVQWLC*VVTLMNAEGCG Trigger: TCCACAGCCCTCTGCATTCATGAGCGTTACCACCCAACACAGCCACTGCACATGAAGATCTATGCAGATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS CCA 72 bp | CGGGGTGAATCGATCTGCATAGATCTTCATGTGCAGTaGCTGTGTTGGGTGGTAACGCTCATGAATGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RGESICIDLHVQ*LCWVVTLMNAE Trigger: CTCTGCATTCATGAGCGTTACCACCCAACACAGCCACTGCACATGAAGATCTATGCAGATCGATTCACCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS CAA 72 bp | ATCGATCTGCATAGATCTTCATGTGCAGTGGCTGTGTaGGGTGGTAACGCTCATGAATGCAGAGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: IDLHRSSCAVAV*GGNAHECRGLW Trigger: CCACAGCCCTCTGCATTCATGAGCGTTACCACCCAACACAGCCACTGCACATGAAGATCTATGCAGATCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086599.11 ENSMUST00000112292.9 ENSMUST00000161610.6 |
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| CDS CCA 72 bp | CTGGAATATACCCCCGAGCGTAACTGTCTTGGAACCTaGGATGATGTACGGAGAGTTGTAGATACCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: LEYTPERNCLGT*DDVRRVVDTKA Trigger: AGCCTTGGTATCTACAACTCTCCGTACATCATCCCAGGTTCCAAGACAGTTACGCTCGGGGGTATATTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112292.9 ENSMUST00000161610.6 |
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