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Pregenerated sensors for DAND5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053226

Ensembl transcript IDs: ENSMUST00000065539.6

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AAGCGGAACCCCAGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTaGGCGTGCGTCAGGGCTGTGTCTGAAGCCCTCTCCCTATTCCAC +
Preference number: 1 (lower is better)
Translates to: KRNPRLGEELSRELC*ACVRAVSEALSLFH
Trigger: GTGGAATAGGGAGAGGGCTTCAGACACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCTGGGGTTCCGCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR TCA 90 bp GGAGCTCAGCAGGGAGCTGTGCTGCGCGTGCGTCAGGGCTGTGTCTaGAGCCCTCTCCCTATTCCACCCCTCTCCAAAAGTGACAGTGCC +
Preference number: 1 (lower is better)
Translates to: GAQQGAVLRVRQGCV*SPLPIPPLSKSDSA
Trigger: GGCACTGTCACTTTTGGAGAGGGGTGGAATAGGGAGAGGGCTTCAGACACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR GCA 90 bp TGCTCTCTTGACCCGATGCACATCATTCAGGTCACGTCTTTCTATTaGGTCTCCTGCTTCTTGCCAAGGTTCATTCATGTCCTGCGCATT +
Preference number: 1 (lower is better)
Translates to: CSLDPMHIIQVTSFY*VSCFLPRFIHVLRI
Trigger: AATGCGCAGGACATGAATGAACCTTGGCAAGAAGCAGGAGACGCAATAGAAAGACGTGACCTGAATGATGTGCATCGGGTCAAGAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR-3UTR TCA 90 bp AGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTGCGCGTGCGTCAGGGCTGTGACTGCTGAGGATTCCTaGGGAGGACGTGAGTTAGTG +
Preference number: 2 (lower is better)
Translates to: RLGEELSRELCCACVRAVTAEDS*GGRELV
Trigger: CACTAACTCACGTCCTCCTCAGGAATCCTCAGCAGT...CACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR-3UTR GCA 90 bp AGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTGCGCGTGCGTCAGGGCTGTGGGTGAAATTCTACCTTaGGGGACTGCTGAGGATTCC +
Preference number: 2 (lower is better)
Translates to: RLGEELSRELCCACVRAVGEILP*GTAEDS
Trigger: GGAATCCTCAGCAGTCCCGCAAGGTAGAATTTCACC...CACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR-3UTR CCA 90 bp CAGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTGCGCGTGCGTCAGGGCTGTCCATGTCTAGTATTCTaGCCCTGTCCAATTCTGCTC +
Preference number: 2 (lower is better)
Translates to: QAGGGAQQGAVLRVRQGCPCLVF*PCPILL
Trigger: GAGCAGAATTGGACAGGGCCAGAATACTAGACATGG...ACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR-3UTR TCA 90 bp CCACGGAATGCCAGGCTGGGCATGAGGCTGCTGCGGGGTCTCGGGTGGGGCAAATCCTCATCTGTAAAATaGCCCATGGTGAAATTCTAC +
Preference number: 2 (lower is better)
Translates to: PRNARLGMRLLRGLGWGKSSSVK*PMVKFY
Trigger: GTAGAATTTCACCATGGGTCATTTTACAGATGAGGA...TTTGCCCCACCCGAGACCCCGCAGCAGCCTCATGCCCAGCCTGGCATTCCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR-3UTR GCA 90 bp ACCTTTATGGTTCCCACGGAATGCCAGGCTGGGCATGAGGCTGCTGCGGGGTCTGCGTCTCCTGCTTCTTaGCAAGGTTCATTCATGTCC +
Preference number: 2 (lower is better)
Translates to: TFMVPTECQAGHEAAAGSASPAS*QGSFMS
Trigger: GGACATGAATGAACCTTGGCAAGAAGCAGGAGACGC...AGACCCCGCAGCAGCCTCATGCCCAGCCTGGCATTCCGTGGGAACCATAAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR GCA 72 bp CCCAGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTaGGCGTGCGTCAGGGCTGTGTCTGAAGCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: PRLGEELSRELC*ACVRAVSEALS
Trigger: GGAGAGGGCTTCAGACACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR GCA 72 bp AACCCCAGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTaGTGCGCGTGCGTCAGGGCTGTGTCTGAAGCCCTC +
Preference number: 3 (lower is better)
Translates to: NPRLGEELSREL*CACVRAVSEAL
Trigger: GAGGGCTTCAGACACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCTGGGGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR GCA 72 bp CTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTGCGCGTaGGTCAGGGCTGTGTCTGAAGCCCTCTCCCTATTC +
Preference number: 3 (lower is better)
Translates to: LGEELSRELCCA*VRAVSEALSLF
Trigger: GAATAGGGAGAGGGCTTCAGACACAGCCCTGACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR CCA 72 bp GAGAGGCAGCTGCACACATGCGGGGTCGCCTCTGGTTaGGGCCAGGTTTTCCTAGCAGCTGCTTCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: ERQLHTCGVASG*GQVFLAAASCL
Trigger: CAAGCAGGAAGCAGCTGCTAGGAAAACCTGGCCCCAACCAGAGGCGACCCCGCATGTGTGCAGCTGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR TCA 72 bp CAGGGAGCTGTGCTGCGCGTGCGTCAGGGCTGTGTCTaGAGCCCTCTCCCTATTCCACCCCTCTCCAAAAGT +
Preference number: 3 (lower is better)
Translates to: QGAVLRVRQGCV*SPLPIPPLSKS
Trigger: ACTTTTGGAGAGGGGTGGAATAGGGAGAGGGCTTCAGACACAGCCCTGACGCACGCGCAGCACAGCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR GCA 72 bp CAGTTGGGAGTGTCTGTCTTGGACACTGGGACGCGGTaGCACCTAGTGGCTAAAAGCGGAACCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: QLGVSVLDTGTR*HLVAKSGTPGW
Trigger: CCAGCCTGGGGTTCCGCTTTTAGCCACTAGGTGGCACCGCGTCCCAGTGTCCAAGACAGACACTCCCAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR-3UTR CAA 90 bp GTCGCCTCTGGTTGGGGCCAGGTTTTCCTAGCAGCTGCTTCCTGCTTGCCTGCCGGTCACGTCTTTCTATaGCGTCTCCTGCTTCTTGCC +
Preference number: 3 (lower is better)
Translates to: VASGWGQVFLAAASCLPAGHVFL*RLLLLA
Trigger: GGCAAGAAGCAGGAGACGCAATAGAAAGACGTGACC...GGCAGGCAAGCAGGAAGCAGCTGCTAGGAAAACCTGGCCCCAACCAGAGGCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR TCA 72 bp CTGAAGCCCTCTCCCTATTCCACCCCTCTCCAAAAGTaGCAGTGCCTAAATAGCTTCGGTTTCCTCATCTGT +
Preference number: 3 (lower is better)
Translates to: LKPSPYSTPLQK*QCLNSFGFLIC
Trigger: ACAGATGAGGAAACCGAAGCTATTTAGGCACTGTCACTTTTGGAGAGGGGTGGAATAGGGAGAGGGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR CCA 72 bp TTGTTGCTGTTGTTGTTGCTGCTGCTGCTGTTATTCTaGTGTCCCCAGAACAGGGTCATCTTTGCTGAGTGT +
Preference number: 3 (lower is better)
Translates to: LLLLLLLLLLLF*CPQNRVIFAEC
Trigger: ACACTCAGCAAAGATGACCCTGTTCTGGGGACACCAGAATAACAGCAGCAGCAGCAACAACAACAGCAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR TCA 72 bp TGTCTAGTATTCTGGCCCTGTCCAATTCTGCTCTCTTaGCCCGATGCACATCATTCAGGTCACGTCTTTCTA +
Preference number: 3 (lower is better)
Translates to: CLVFWPCPILLS*PDAHHSGHVFL
Trigger: TAGAAAGACGTGACCTGAATGATGTGCATCGGGTCAAGAGAGCAGAATTGGACAGGGCCAGAATACTAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR TCA 90 bp CGGAACCCCAGGCTGGGGGAGGAGCTCAGCAGGGAGCTGTGCTGCGCGTGCGTCTCCAGAGTCCAGCTCTaGTTGATAGCAGTCCCGGAC +
Preference number: 4 (lower is better)
Translates to: RNPRLGEELSRELCCACVSRVQL*LIAVPD
Trigger: GTCCGGGACTGCTATCAATCAGAGCTGGACTCTGGA...GACGCACGCGCAGCACAGCTCCCTGCTGAGCTCCTCCCCCAGCCTGGGGTTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR GCA 90 bp TTTATGGTTCCCACGGAATGCCAGGCTGGGCATGAGGCTGCTGCGGGGTCTCGGCCCTGCTGTTTGTTCTaGAGGCCCAGGAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: FMVPTECQAGHEAAAGSRPCCLF*RPRKAS
Trigger: GGAGGCCTTCCTGGGCCTGCAGAACAAACAGCAGGG...CCGAGACCCCGCAGCAGCCTCATGCCCAGCCTGGCATTCCGTGGGAACCATAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR GCA 90 bp CCAACCTTTATGGTTCCCACGGAATGCCAGGCTGGGCATGAGGCTGCTGCGGGGCCAGCAGCTACTCTCTaGCCTCCTCCCTGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: PTFMVPTECQAGHEAAAGPAATL*PPPCSS
Trigger: TGAGCTGCAGGGAGGAGGGCAGAGAGTAGCTGCTGG...CCCCGCAGCAGCCTCATGCCCAGCCTGGCATTCCGTGGGAACCATAAAGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR GCA 90 bp ACCTTTATGGTTCCCACGGAATGCCAGGCTGGGCATGAGGCTGCTGCGGGGTCTGGACCCGGGCACTTGTaGAACCAGGCCTGGAGATCA +
Preference number: 4 (lower is better)
Translates to: TFMVPTECQAGHEAAAGSGPGHL*NQAWRS
Trigger: TGATCTCCAGGCCTGGTTGCACAAGTGCCCGGGTCC...AGACCCCGCAGCAGCCTCATGCCCAGCCTGGCATTCCGTGGGAACCATAAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR CCA 90 bp CCAACCTTTATGGTTCCCACGGAATGCCAGGCTGGGCATGAGGCTGCTGCGGGGAGAAGACTACAGGGGTaGGATCCGAGCTGGGAATGT +
Preference number: 4 (lower is better)
Translates to: PTFMVPTECQAGHEAAAGRRLQG*DPSWEC
Trigger: ACATTCCCAGCTCGGATCCCACCCCTGTAGTCTTCT...CCCCGCAGCAGCCTCATGCCCAGCCTGGCATTCCGTGGGAACCATAAAGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR GCA 90 bp TTGGGTAGTGCTGTCATCATAACAGTTGGGAGTGTCTGTCTTGGACACTGGGACCCGGCACACAGCTGTTaGAGAAGACTACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGSAVIITVGSVCLGHWDPAHSC*RRLQGW
Trigger: CCACCCCTGTAGTCTTCTGCAACAGCTGTGTGCCGG...GTCCCAGTGTCCAAGACAGACACTCCCAACTGTTATGATGACAGCACTACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR CAA 72 bp CCCCAGAACAGGGTCATCTTTGCTGAGTGTCCAGGTTaGGGTAGTGCTGTCATCATAACAGTTGGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: PQNRVIFAECPG*GSAVIITVGSV
Trigger: GACACTCCCAACTGTTATGATGACAGCACTACCCAAACCTGGACACTCAGCAAAGATGACCCTGTTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
3UTR CAA 72 bp ATTCAGGTCACGTCTTTCTATTGCGTCTCCTGCTTCTaGCCAAGGTTCATTCATGTCCTGCGCATTCCTCTA +
Preference number: 4 (lower is better)
Translates to: IQVTSFYCVSCF*PRFIHVLRIPL
Trigger: TAGAGGAATGCGCAGGACATGAATGAACCTTGGCAAGAAGCAGGAGACGCAATAGAAAGACGTGACCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR CAA 90 bp GTCCCCAGAACAGGGTCATCTTTGCTGAGTGTCCAGGTTTGGGTAGTGCTGTCACCTGTCCCCTGCTGTTaGTTCTGCAGGCCCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VPRTGSSLLSVQVWVVLSPVPCC*FCRPRK
Trigger: CTTCCTGGGCCTGCAGAACAAACAGCAGGGGACAGG...TGACAGCACTACCCAAACCTGGACACTCAGCAAAGATGACCCTGTTCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6
CDS-3UTR CAA 90 bp GTCCCCAGAACAGGGTCATCTTTGCTGAGTGTCCAGGTTTGGGTAGTGCTGTCACTCCTGAAGCACTTCTaGAGGAGCCAAGGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: VPRTGSSLLSVQVWVVLSLLKHF*RSQGQR
Trigger: CCTTTGCCCTTGGCTCCTCAAGAAGTGCTTCAGGAG...TGACAGCACTACCCAAACCTGGACACTCAGCAAAGATGACCCTGTTCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000065539.6