Pregenerated sensors for DALRD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019039Ensembl transcript IDs: ENSMUST00000019183.14, ENSMUST00000193427.3, ENSMUST00000195249.6
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCATCTGGACGCCCAGCCGGGCCTGGGTGGCCGCCCTCTGGCCAGTaGCGCACAGCCTCCTGCAGCTCCGAGAGCACAGAGAGCACATCT | + |
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Preference number: 1 (lower is better) Translates to: ASGRPAGPGWPPSGQ*RTASCSSESTESTS Trigger: AGATGTGCTCTCTGTGCTCTCGGAGCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 90 bp | TACACCAGCATCTGGACGCCCAGCCGGGCCTGGGTGGCCGCCCTCTaGCCAGTGGCGCACAGCCTCCTGCAGCTCCGAGAGCACAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: YTSIWTPSRAWVAAL*PVAHSLLQLREHRE Trigger: CTCTCTGTGCTCTCGGAGCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 90 bp | ACGCAGTCATCTACACCAGCATCTGGACGCCCAGCCGGGCCTGGGTaGCCGCCCTCTGGCCAGTGGCGCACAGCCTCCTGCAGCTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: TQSSTPASGRPAGPG*PPSGQWRTASCSSE Trigger: CTCGGAGCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTAGATGACTGCGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 90 bp | AACCACGCAGTCATCTACACCAGCATCTGGACGCCCAGCCGGGCCTaGGTGGCCGCCCTCTGGCCAGTGGCGCACAGCCTCCTGCAGCTC | + |
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Preference number: 1 (lower is better) Translates to: NHAVIYTSIWTPSRA*VAALWPVAHSLLQL Trigger: GAGCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTAGATGACTGCGTGGTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR GCA 90 bp | GCCGGGCCTGGGTGGCCGCCCTCTGGCCAGTGGCGCACAGCCTCCTaGAGCTCCGAGAGCACAGAGAGCACATCTTCAGTCACCAAACAG | + |
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Preference number: 1 (lower is better) Translates to: AGPGWPPSGQWRTAS*SSESTESTSSVTKQ Trigger: CTGTTTGGTGACTGAAGATGTGCTCTCTGTGCTCTCGGAGCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR GCA 90 bp | CTTCAGTCACCAAACAGTGGTCTATGCTGGGGTCATAGCCAGCAGTaGCTCTCTGTTCTACCAGTTCCTTCAGACACAGTCGGCCTAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LQSPNSGLCWGHSQQ*LSVLPVPSDTVGLG Trigger: TCCTAGGCCGACTGTGTCTGAAGGAACTGGTAGAACAGAGAGGCACTGCTGGCTATGACCCCAGCATAGACCACTGTTTGGTGACTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR GCA 90 bp | CCGAGAGCACAGAGAGCACATCTTCAGTCACCAAACAGTGGTCTATaGTGGGGTCATAGCCAGCAGTGCCTCTCTGTTCTACCAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PRAQRAHLQSPNSGL*WGHSQQCLSVLPVP Trigger: AGGAACTGGTAGAACAGAGAGGCACTGCTGGCTATGACCCCAGCATAGACCACTGTTTGGTGACTGAAGATGTGCTCTCTGTGCTCTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 90 bp | AGAGCACAGAGAGCACATCTTCAGTCACCAAACAGTGGTCTATGCTaGGGTCATAGCCAGCAGTGCCTCTCTGTTCTACCAGTTCCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: RAQRAHLQSPNSGLC*GHSQQCLSVLPVPS Trigger: TGAAGGAACTGGTAGAACAGAGAGGCACTGCTGGCTATGACCCCAGCATAGACCACTGTTTGGTGACTGAAGATGTGCTCTCTGTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 90 bp | GCCCGGTCATCCAATTTCTGCCAGAGCAAATCCAGCTTTTGTTGCTaGAATGCCTCTTCACAGCTAACCACGTGTATAACCACGCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: ARSSNFCQSKSSFCC*NASSQLTTCITTQS Trigger: TGACTGCGTGGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGACCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR GCA 90 bp | GTCATCCAATTTCTGCCAGAGCAAATCCAGCTTTTGTTGCTGGAATaGCTCTTCACAGCTAACCACGTGTATAACCACGCAGTCATCTAC | + |
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Preference number: 1 (lower is better) Translates to: VIQFLPEQIQLLLLE*LFTANHVYNHAVIY Trigger: GTAGATGACTGCGTGGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGTGAGGAGCCCGGTCATCCAATTTCTGCCAGAGCAAATCCAGCTTTTGCCGCCCTCTGGCCAGTaGCGCACAGCCTCCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LLVRSPVIQFLPEQIQLLPPSGQ*RTASCS Trigger: GCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGG...CAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGACCGGGCTCCTCACAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR-3UTR CCA 90 bp | CACGTGTATAACCACGCAGTCATCTACACCAGCATCTGGACGCCCAGCCGGGCCAACAGTGGTCTATGCTaGGGTCATAGCCAGCAGTGC | + |
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Preference number: 2 (lower is better) Translates to: HVYNHAVIYTSIWTPSRANSGLC*GHSQQC Trigger: GCACTGCTGGCTATGACCCCAGCATAGACCACTGTT...GGCCCGGCTGGGCGTCCAGATGCTGGTGTAGATGACTGCGTGGTTATACACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CAA 90 bp | AGGAGCCCGGTCATCCAATTTCTGCCAGAGCAAATCCAGCTTTTGTaGCTGGAATGCCTCTTCACAGCTAACCACGTGTATAACCACGCA | + |
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Preference number: 2 (lower is better) Translates to: RSPVIQFLPEQIQLL*LECLFTANHVYNHA Trigger: TGCGTGGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGACCGGGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CAA 90 bp | GTGAGGAGCCCGGTCATCCAATTTCTGCCAGAGCAAATCCAGCTTTaGTTGCTGGAATGCCTCTTCACAGCTAACCACGTGTATAACCAC | + |
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Preference number: 2 (lower is better) Translates to: VRSPVIQFLPEQIQL*LLECLFTANHVYNH Trigger: GTGGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGACCGGGCTCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGCCTCTTCACAGCTAACCACGTGTATAACCACGCAGTCATCTACACCAGGTCATAGCCAGCAGTaGCTCTCTGTTCTACCAGTT | + |
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Preference number: 2 (lower is better) Translates to: WNASSQLTTCITTQSSTPGHSQQ*LSVLPV Trigger: AACTGGTAGAACAGAGAGGCACTGCTGGCTATGACC...TGGTGTAGATGACTGCGTGGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 72 bp | CGCCCAGCCGGGCCTGGGTGGCCGCCCTCTGGCCAGTaGCGCACAGCCTCCTGCAGCTCCGAGAGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: RPAGPGWPPSGQ*RTASCSSESTE Trigger: CTCTGTGCTCTCGGAGCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGCTGGGCG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 72 bp | GTCATCTACACCAGCATCTGGACGCCCAGCCGGGCCTaGGTGGCCGCCCTCTGGCCAGTGGCGCACAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: VIYTSIWTPSRA*VAALWPVAHSL Trigger: GAGGCTGTGCGCCACTGGCCAGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTAGATGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 72 bp | CACGTGTATAACCACGCAGTCATCTACACCAGCATCTaGACGCCCAGCCGGGCCTGGGTGGCCGCCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: HVYNHAVIYTSI*TPSRAWVAALW Trigger: CCAGAGGGCGGCCACCCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTAGATGACTGCGTGGTTATACACGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR GCA 72 bp | CCAAACAGTGGTCTATGCTGGGGTCATAGCCAGCAGTaGCTCTCTGTTCTACCAGTTCCTTCAGACACAGTC | + |
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Preference number: 3 (lower is better) Translates to: PNSGLCWGHSQQ*LSVLPVPSDTV Trigger: GACTGTGTCTGAAGGAACTGGTAGAACAGAGAGGCACTGCTGGCTATGACCCCAGCATAGACCACTGTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR TCA 72 bp | GACCACACACCAGGTGTTTCTGTGAAAGACTGCTTGTaGGGAGCCCGGTCATCCAATTTCTGCCAGAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: DHTPGVSVKDCL*GARSSNFCQSK Trigger: TTTGCTCTGGCAGAAATTGGATGACCGGGCTCCTCACAAGCAGTCTTTCACAGAAACACCTGGTGTGTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR GCA 72 bp | TTTCTGCCAGAGCAAATCCAGCTTTTGTTGCTGGAATaGCTCTTCACAGCTAACCACGTGTATAACCACGCA | + |
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Preference number: 3 (lower is better) Translates to: FLPEQIQLLLLE*LFTANHVYNHA Trigger: TGCGTGGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR CCA 72 bp | TCCAATTTCTGCCAGAGCAAATCCAGCTTTTGTTGCTaGAATGCCTCTTCACAGCTAACCACGTGTATAACC | + |
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Preference number: 3 (lower is better) Translates to: SNFCQSKSSFCC*NASSQLTTCIT Trigger: GGTTATACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| 3UTR TCA 72 bp | ACTGTATTTATTCTGACTTTAAGTGCCCAACATCTGTaGGGTCTTGTTTCTTTCCCAGTTGATGCTTTTATA | + |
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Preference number: 3 (lower is better) Translates to: TVFILTLSAQHL*GLVSFPVDAFI Trigger: TATAAAAGCATCAACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAATACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR TCA 90 bp | CTGCCAGAGCAAATCCAGCTTTTGTTGCTGGAATGCCTCTTCACAGCTAACCACGCACCTGGCCGTCCCTaGAGCGCGCCTGTAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: LPEQIQLLLLECLFTANHAPGRP*SAPVAR Trigger: GCGCGCTACAGGCGCGCTTCAGGGACGGCCAGGTGC...GTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| CDS-3UTR GCA 90 bp | CAGAGCAAATCCAGCTTTTGTTGCTGGAATGCCTCTTCACAGCTAACCACGTGTGCCACTCCGGGACCCTaGAGGCAGGAGACCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: QSKSSFCCWNASSQLTTCATPGP*RQETAR Trigger: CCGTGCGGTCTCCTGCCTGCAGGGTCCCGGAGTGGC...ACACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGCACCTGGCCGTCCCTaGAGCGCGCCTGTAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSAPGRP*SAPVAR Trigger: GCGCGCTACAGGCGCGCTTCAGGGACGGCCAGGTGC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGCCACTCCGGGACCCTaGAGGCAGGAGACCGCACGG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSATPGP*RQETAR Trigger: CCGTGCGGTCTCCTGCCTGCAGGGTCCCGGAGTGGC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCCGCCCTCTGGCCAGTaGCGCACAGCCTCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSPPSGQ*RTASCS Trigger: GCTGCAGGAGGCTGTGCGCCACTGGCCAGAGGGCGG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGTGCGGACAGGGATGTaGAGGCCTGGGGTGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSVRTGM*RPGVPA Trigger: GGCCGGCACCCCAGGCCTCCACATCCCTGTCCGCAC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAGGGATGTGGAGGCCTaGGGTGCCGGCCAGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSRDVEA*GAGQTH Trigger: GTGAGTCTGGCCGGCACCCCAGGCCTCCACATCCCT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| 3UTR CAA 72 bp | CCGGTCATCCAATTTCTGCCAGAGCAAATCCAGCTTTaGTTGCTGGAATGCCTCTTCACAGCTAACCACGTG | + |
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Preference number: 4 (lower is better) Translates to: PVIQFLPEQIQL*LLECLFTANHV Trigger: CACGTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTGCTCTGGCAGAAATTGGATGACCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195249.6 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTTGTGGAGGCCTGGGGTaGCGGCCAGACTCACAGTCT | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSCGGLG*RPDSQS Trigger: AGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACA...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTATCTACACCAGCATCTaGACGCCCAGCCGGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSIYTSI*TPSRAW Trigger: CCAGGCCCGGCTGGGCGTCCAGATGCTGGTGTAGAT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTTGGGCCAGGAGGAGCTaGCTCTGTGGGGCTGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSWARRS*LCGAVL Trigger: AAGCACAGCCCCACAGAGCCAGCTCCTCCTGGCCCA...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTTGCATACCATCTCCGTaGGGACAGGGATGTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSCIPSP*GQGCGG Trigger: GCCTCCACATCCCTGTCCGCACGGAGATGGTATGCA...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAGGCGAGCAAACATCTaGCCAAAGAGGTGTGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSRRANI*PKRCGR Trigger: TCGGCCACACCTCTTTGGTCAGATGTTTGCTCGCCT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCCTTTGTTGAGATGGTaGTGTGGGCCAGGAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSPLLRW*CGPGGA Trigger: AGCTCCTCCTGGCCCACAGCACCATCTCAACAAAGG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTTGCCCTTTGTTGAGATaGTGCTGTGGGCCAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSCPLLR*CCGPGG Trigger: TCCTCCTGGCCCACAGCACCATCTCAACAAAGGGCA...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGCCAGACTCACAGTCTaGCTCAGCAGGTCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSARLTV*LSRSRK Trigger: CTTTCTGGACCTGCTGAGCCAGACTGTGAGTCTGGC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTATAGCCAAGCCTGTGTaGAACACCTCACGCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSIAKPV*NTSRTA Trigger: GGCAGTGCGTGAGGTGTTCCACACAGGCTTGGCTAT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAGGGAAGGACACTGTTaGAAAGCAGCAGCCACTCAC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSREGHC*KAAATH Trigger: GTGAGTGGCTGCTGCTTTTCAACAGTGTCCTTCCCT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCCAAACAGTGGTCTATaGTGGGGTCATAGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSPNSGL*WGHSQQ Trigger: CTGCTGGCTATGACCCCAGCATAGACCACTGTTTGG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAACAGTGGTCTATGCTaGGGTCATAGCCAGCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSNSGLC*GHSQQC Trigger: GCACTGCTGGCTATGACCCCAGCATAGACCACTGTT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGGTCATAGCCAGCAGTaGCTCTCTGTTCTACCAGTT | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSGHSQQ*LSVLPV Trigger: AACTGGTAGAACAGAGAGGCACTGCTGGCTATGACC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAAGTCCCGCTCTTTGTaGCCTTTGTTGAGATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSKSRSL*PLLRWC Trigger: GCACCATCTCAACAAAGGGCACAAAGAGCGGGACTT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGTGAGAAGTCCAGACTaGTCACAAGCGGAAAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSVRSPD*SQAEKW Trigger: CCACTTTTCCGCTTGTGAGCAGTCTGGACTTCTCAC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR TCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGGGCACAGTTATACATaGCAAAAGTCCCGCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSGHSYT*QKSRSL Trigger: CAAAGAGCGGGACTTTTGTCATGTATAACTGTGCCC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAAATCCATGCTGAGCTaGACCAGGAACTTGCATACC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSKSMLS*TRNLHT Trigger: GGTATGCAAGTTCCTGGTGCAGCTCAGCATGGATTT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCACTCACCCTCATCATaGAGTAGTGAGAAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSHSPSS*SSEKSR Trigger: TCTGGACTTCTCACTACTCCATGATGAGGGTGAGTG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCTTTTGTTGCTGGAATaGCTCTTCACAGCTAACCAC | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSLLLLE*LFTANH Trigger: GTGGTTAGCTGTGAAGAGGCATTCCAGCAACAAAAG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR GCA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTAAATCCAGCTTTTGTTaGTGGAATGCCTCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSKSSFC*WNASSQ Trigger: CTGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTT...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS GCA 90 bp | GCGGGTGTCGGCGCGCAGCGCAGTACAGGGGCCACTCCGGGACCCTaGAGGCAGGAGACCGCACGGAACACGCACTCTGGCACCTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: AGVGAQRSTGATPGP*RQETARNTHSGTWP Trigger: CGGCCAGGTGCCAGAGTGCGTGTTCCGTGCGGTCTCCTGCCTGCAGGGTCCCGGAGTGGCCCCTGTACTGCGCTGCGCGCCGACACCCGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS CCA 90 bp | GGACCCTGCAGGCAGGAGACCGCACGGAACACGCACTCTGGCACCTaGCCGTCCCTGAAGCGCGCCTGTAGCGCGCTTCGCGGTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GPCRQETARNTHSGT*PSLKRACSALRGAK Trigger: CTTGGCACCGCGAAGCGCGCTACAGGCGCGCTTCAGGGACGGCCAGGTGCCAGAGTGCGTGTTCCGTGCGGTCTCCTGCCTGCAGGGTCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS TCA 90 bp | GGCAGGAGACCGCACGGAACACGCACTCTGGCACCTGGCCGTCCCTaGAGCGCGCCTGTAGCGCGCTTCGCGGTGCCAAGAAGTCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: GRRPHGTRTLAPGRP*SAPVARFAVPRSLE Trigger: TTCGAGACTTCTTGGCACCGCGAAGCGCGCTACAGGCGCGCTTCAGGGACGGCCAGGTGCCAGAGTGCGTGTTCCGTGCGGTCTCCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS CCA 90 bp | GCCAGGGCACCGAGTACATGTTCGAAGACAGCGGGCCGCTGTAGTTaGAGCGATAAACCCGCGGGTGTCGGCGCGCAGCGCAGTACAGGG | + |
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Preference number: 5 (lower is better) Translates to: ARAPSTCSKTAGRCS*SDKPAGVGAQRSTG Trigger: CCCTGTACTGCGCTGCGCGCCGACACCCGCGGGTTTATCGCTCCAACTACAGCGGCCCGCTGTCTTCGAACATGTACTCGGTGCCCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS TCA 90 bp | CTCCTCCGTGCTTCAGAGCTGAGGCCTCGCACACCTGAGCATGTCTaGGCCTGTAGTACTGAGGGGCAGTCAGCTGGGTGCCGGGTACAC | + |
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Preference number: 5 (lower is better) Translates to: LLRASELRPRTPEHV*ACSTEGQSAGCRVH Trigger: GTGTACCCGGCACCCAGCTGACTGCCCCTCAGTACTACAGGCTCAGACATGCTCAGGTGTGCGAGGCCTCAGCTCTGAAGCACGGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS GCA 90 bp | GGCATGGGTTTCCTTAAACCACACTGGGCTACCAGGCCCTACAGCTaGATTAAGGGCCTCCAGCGTCTCGCCAACCCCAAGGCGCCCGGT | + |
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Preference number: 5 (lower is better) Translates to: GMGFLKPHWATRPYS*IKGLQRLANPKAPG Trigger: ACCGGGCGCCTTGGGGTTGGCGAGACGCTGGAGGCCCTTAATGCAGCTGTAGGGCCTGGTAGCCCAGTGTGGTTTAAGGAAACCCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS GCA 90 bp | ACTTGCATACCATCTCCGTGCGGACAGGGATGTGGAGGCCTGGGGTaGCGGCCAGACTCACAGTCTGGCTCAGCAGGTCCAGAAAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: TCIPSPCGQGCGGLG*RPDSQSGSAGPERE Trigger: TTCCCTTTCTGGACCTGCTGAGCCAGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACATCCCTGTCCGCACGGAGATGGTATGCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS CCA 90 bp | CAGGAACTTGCATACCATCTCCGTGCGGACAGGGATGTGGAGGCCTaGGGTGCCGGCCAGACTCACAGTCTGGCTCAGCAGGTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QELAYHLRADRDVEA*GAGQTHSLAQQVQK Trigger: TTTCTGGACCTGCTGAGCCAGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACATCCCTGTCCGCACGGAGATGGTATGCAAGTTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS TCA 90 bp | AACACCTCACGCACTGCCCTCAAAAGCTGTAGGCGAGCAAACATCTaGCCAAAGAGGTGTGGCCGAGGTTCCCCTAGAATATGTACTCGG | + |
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Preference number: 5 (lower is better) Translates to: NTSRTALKSCRRANI*PKRCGRGSPRICTR Trigger: CCGAGTACATATTCTAGGGGAACCTCGGCCACACCTCTTTGGTCAGATGTTTGCTCGCCTACAGCTTTTGAGGGCAGTGCGTGAGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS GCA 90 bp | GCAGCAGCCACTCACCCTCATCATGGAGTAGTGAGAAGTCCAGACTaGTCACAAGCGGAAAAGTGGGATACAGACCTTGCTCCGTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: AAATHPHHGVVRSPD*SQAEKWDTDLAPFH Trigger: ATGGAACGGAGCAAGGTCTGTATCCCACTTTTCCGCTTGTGAGCAGTCTGGACTTCTCACTACTCCATGATGAGGGTGAGTGGCTGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS TCA 90 bp | GACTCACAGTCTGGCTCAGCAGGTCCAGAAAGGGAAGGACACTGTTaGAAAGCAGCAGCCACTCACCCTCATCATGGAGTAGTGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: DSQSGSAGPEREGHC*KAAATHPHHGVVRS Trigger: ACTTCTCACTACTCCATGATGAGGGTGAGTGGCTGCTGCTTTTCAACAGTGTCCTTCCCTTTCTGGACCTGCTGAGCCAGACTGTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS CCA 90 bp | CATCATGGAGTAGTGAGAAGTCCAGACTGCTCACAAGCGGAAAAGTaGGATACAGACCTTGCTCCGTTCCATGTTTGTAGCCCTCGAAGA | + |
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Preference number: 5 (lower is better) Translates to: HHGVVRSPDCSQAEK*DTDLAPFHVCSPRR Trigger: TCTTCGAGGGCTACAAACATGGAACGGAGCAAGGTCTGTATCCCACTTTTCCGCTTGTGAGCAGTCTGGACTTCTCACTACTCCATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCGCTCTTTGTGCCCTTaGTTGAGATGGTGCTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSRSLCP*LRWCCG Trigger: CCCACAGCACCATCTCAACAAAGGGCACAAAGAGCG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTGTTTCTGGAGGAAAGTaGACATGTGAGGGTCCCGCA | + |
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Preference number: 5 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSVSGGK*TCEGPA Trigger: TGCGGGACCCTCACATGTCAACTTTCCTCCAGAAAC...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTTCTTTGTGCCCTTTGTaGAGATGGTGCTGTGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSSLCPL*RWCCGP Trigger: TGGCCCACAGCACCATCTCAACAAAGGGCACAAAGA...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCTTAGCATCTCAAATTaGATGGTAGCCACGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSLSISN*MVATER Trigger: CCTCTCCGTGGCTACCATCAAATTTGAGATGCTAAG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS-3UTR CAA 90 bp | ATTTATTCTGACTTTAAGTGCCCAACATCTGTGAGGTCTTGTTTCTTTCCCAGTCAAATCCAGCTTTTGTaGCTGGAATGCCTCTTCACA | + |
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Preference number: 5 (lower is better) Translates to: IYSDFKCPTSVRSCFFPSQIQLL*LECLFT Trigger: TGTGAAGAGGCATTCCAGCAACAAAAGCTGGATTTG...ACTGGGAAAGAAACAAGACCTCACAGATGTTGGGCACTTAAAGTCAGAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS GCA 72 bp | GGCGCGCAGCGCAGTACAGGGGCCACTCCGGGACCCTaGAGGCAGGAGACCGCACGGAACACGCACTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GAQRSTGATPGP*RQETARNTHSG Trigger: GCCAGAGTGCGTGTTCCGTGCGGTCTCCTGCCTGCAGGGTCCCGGAGTGGCCCCTGTACTGCGCTGCGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS TCA 72 bp | CCGCACGGAACACGCACTCTGGCACCTGGCCGTCCCTaGAGCGCGCCTGTAGCGCGCTTCGCGGTGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: PHGTRTLAPGRP*SAPVARFAVPR Trigger: TCTTGGCACCGCGAAGCGCGCTACAGGCGCGCTTCAGGGACGGCCAGGTGCCAGAGTGCGTGTTCCGTGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS CCA 72 bp | AGGCAGGAGACCGCACGGAACACGCACTCTGGCACCTaGCCGTCCCTGAAGCGCGCCTGTAGCGCGCTTCGC | + |
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Preference number: 6 (lower is better) Translates to: RQETARNTHSGT*PSLKRACSALR Trigger: GCGAAGCGCGCTACAGGCGCGCTTCAGGGACGGCCAGGTGCCAGAGTGCGTGTTCCGTGCGGTCTCCTGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS CCA 72 bp | CCGAGTACATGTTCGAAGACAGCGGGCCGCTGTAGTTaGAGCGATAAACCCGCGGGTGTCGGCGCGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PSTCSKTAGRCS*SDKPAGVGAQR Trigger: GCGCTGCGCGCCGACACCCGCGGGTTTATCGCTCCAACTACAGCGGCCCGCTGTCTTCGAACATGTACTCGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000195249.6 |
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| CDS CCA 72 bp | GCATACCATCTCCGTGCGGACAGGGATGTGGAGGCCTaGGGTGCCGGCCAGACTCACAGTCTGGCTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: AYHLRADRDVEA*GAGQTHSLAQQ Trigger: CTGCTGAGCCAGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACATCCCTGTCCGCACGGAGATGGTATGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS CCA 72 bp | AGGAACTTGCATACCATCTCCGTGCGGACAGGGATGTaGAGGCCTGGGGTGCCGGCCAGACTCACAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RNLHTISVRTGM*RPGVPARLTVW Trigger: CCAGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACATCCCTGTCCGCACGGAGATGGTATGCAAGTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS CCA 72 bp | ATGTGGAGGCCTGGGGTGCCGGCCAGACTCACAGTCTaGCTCAGCAGGTCCAGAAAGGGAAGGACACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: MWRPGVPARLTV*LSRSRKGRTLL Trigger: CAACAGTGTCCTTCCCTTTCTGGACCTGCTGAGCCAGACTGTGAGTCTGGCCGGCACCCCAGGCCTCCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS CCA 72 bp | CTCAGCGGAGGGAGGCCCAGCATAGCCAAGCCTGTGTaGAACACCTCACGCACTGCCCTCAAAAGCTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LSGGRPSIAKPV*NTSRTALKSCR Trigger: CCTACAGCTTTTGAGGGCAGTGCGTGAGGTGTTCCACACAGGCTTGGCTATGCTGGGCCTCCCTCCGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS CAA 90 bp | GCCAGGAGGAGCTGGCTCTGTGGGGCTGTGCTTAGCATCTCAAATTaGATGGTAGCCACGGAGAGGATGTCGAAGGTCTCAGTCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: ARRSWLCGAVLSISN*MVATERMSKVSVQA Trigger: CGCCTGGACTGAGACCTTCGACATCCTCTCCGTGGCTACCATCAAATTTGAGATGCTAAGCACAGCCCCACAGAGCCAGCTCCTCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS TCA 72 bp | CGCACTGCCCTCAAAAGCTGTAGGCGAGCAAACATCTaGCCAAAGAGGTGTGGCCGAGGTTCCCCTAGAATA | + |
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Preference number: 6 (lower is better) Translates to: RTALKSCRRANI*PKRCGRGSPRI Trigger: TATTCTAGGGGAACCTCGGCCACACCTCTTTGGTCAGATGTTTGCTCGCCTACAGCTTTTGAGGGCAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS GCA 72 bp | TTGCAAGAACACAGGTTCTCAGTGTTTCGGTCGAGGTaGTCTTCGAGGCAGTGGGCCATTCCACCCGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: LQEHRFSVFRSR*SSRQWAIPPEV Trigger: AACTTCGGGTGGAATGGCCCACTGCCTCGAAGAGCACCTCGACCGAAACACTGAGAACCTGTGTTCTTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS CAA 90 bp | AGACTCACAGTCTGGCTCAGCAGGTCCAGAAAGGGAAGGACACTGTaGAAAAGCAGCAGCCACTCACCCTCATCATGGAGTAGTGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RLTVWLSRSRKGRTL*KSSSHSPSSWSSEK Trigger: CTTCTCACTACTCCATGATGAGGGTGAGTGGCTGCTGCTTTTCAACAGTGTCCTTCCCTTTCTGGACCTGCTGAGCCAGACTGTGAGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS GCA 72 bp | AGGGGGCAGCGTCGCTTCCTTAGAACCATTAAGGTTTaGAAGAACACAGGTTCTCAGTGTTTCGGTCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: RGQRRFLRTIKV*KNTGSQCFGRG Trigger: ACCTCGACCGAAACACTGAGAACCTGTGTTCTTGCAAACCTTAATGGTTCTAAGGAAGCGACGCTGCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019183.14 |
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| CDS CAA 72 bp | CAGACTGCTCACAAGCGGAAAAGTGGGATACAGACCTaGCTCCGTTCCATGTTTGTAGCCCTCGAAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: QTAHKRKSGIQT*LRSMFVALEEC Trigger: ACACTCTTCGAGGGCTACAAACATGGAACGGAGCAAGGTCTGTATCCCACTTTTCCGCTTGTGAGCAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS GCA 72 bp | ACTCACCCTCATCATGGAGTAGTGAGAAGTCCAGACTaGTCACAAGCGGAAAAGTGGGATACAGACCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: THPHHGVVRSPD*SQAEKWDTDLA Trigger: AGCAAGGTCTGTATCCCACTTTTCCGCTTGTGAGCAGTCTGGACTTCTCACTACTCCATGATGAGGGTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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| CDS CCA 72 bp | GTAGTGAGAAGTCCAGACTGCTCACAAGCGGAAAAGTaGGATACAGACCTTGCTCCGTTCCATGTTTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VVRSPDCSQAEK*DTDLAPFHVCS Trigger: GCTACAAACATGGAACGGAGCAAGGTCTGTATCCCACTTTTCCGCTTGTGAGCAGTCTGGACTTCTCACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019183.14 ENSMUST00000193427.3 |
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