RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAGLB (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039206

Ensembl transcript IDs: ENSMUST00000045593.12

Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTAGTGATCAGCTAGCTCATGTATCCATGAGGGAGGGGCTGCAGTaGCAGCTCAGAGGACACTCAGGCTGTCCTAGTGACCCCGGAAAG +
Preference number: 1 (lower is better)
Translates to: VSDQLAHVSMREGLQ*QLRGHSGCPSDPGK
Trigger: CTTTCCGGGGTCACTAGGACAGCCTGAGTGTCCTCTGAGCTGGCACTGCAGCCCCTCCCTCATGGATACATGAGCTAGCTGATCACTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 90 bp GGTTATTCTGGCTGGCCTAGAACTCACTTTGGAACAGGCTGTGCATaGGCTGGCAGAGAATGGTCTGCCCCTGCTCTGAATGCTGGGATA +
Preference number: 1 (lower is better)
Translates to: GYSGWPRTHFGTGCA*AGREWSAPALNAGI
Trigger: TATCCCAGCATTCAGAGCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCTGTTCCAAAGTGAGTTCTAGGCCAGCCAGAATAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 90 bp CTGTGCATGAGCTGGCAGAGAATGGTCTGCCCCTGCTCTGAATGCTaGGATAACAATGCGCCCCCTACAGGTATACTTAGTATCCTACAG +
Preference number: 1 (lower is better)
Translates to: LCMSWQRMVCPCSEC*DNNAPPTGILSILQ
Trigger: CTGTAGGATACTAAGTATACCTGTAGGGGGCGCATTGTTATCCCAGCATTCAGAGCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 90 bp CCCTTTGGAGATTTGTTTGGAGACAACATCTCGTGTAGCAAAAGATaGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCC +
Preference number: 1 (lower is better)
Translates to: PFGDLFGDNISCSKR*LGSFKVVTSSVWSS
Trigger: GGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTTGCTACACGAGATGTTGTCTCCAAACAAATCTCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR GCA 90 bp TGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTTGGCGTGTTTaGTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCAC +
Preference number: 1 (lower is better)
Translates to: WLCLCFWNLTSSWRV*STFKPWITGGMESH
Trigger: GTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAACACGCCAAGAGCTTGTCAAATTCCAAAAACACAAGCATAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR GCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCAGGGAGGGGCTGCAGTaGCAGCTCAGAGGACACTCA +
Preference number: 2 (lower is better)
Translates to: TRGNGTLELSKFLALRNPREGLQ*QLRGHS
Trigger: TGAGTGTCCTCTGAGCTGGCACTGCAGCCCCTCCCT...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR GCA 90 bp AGTGCCAGCTCAGAGGACACTCAGGCTGTCCTAGTGACCCCGGAAAGACGCAGGAAGTCCCAACACCTATaGGTGTTCCCAACTCCGGAT +
Preference number: 2 (lower is better)
Translates to: SASSEDTQAVLVTPERRRKSQHL*VFPTPD
Trigger: ATCCGGAGTTGGGAACACGCATAGGTGTTGGGACTT...CCTGCGTCTTTCCGGGGTCACTAGGACAGCCTGAGTGTCCTCTGAGCTGGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR GCA 90 bp TCTAGACCTCGCCCACGTGGACAGACGCTTCCTGTCATGGCTCTGCCTAGAGATCCCTTCAGGCTTACTTaGCCCCCTTTGGAGATTTGT +
Preference number: 2 (lower is better)
Translates to: SRPRPRGQTLPVMALPRDPFRLT*PPLEIC
Trigger: ACAAATCTCCAAAGGGGGGCAAGTAAGCCTGAAGGG...ATCTCTAGGCAGAGCCATGACAGGAAGCGTCTGTCCACGTGGGCGAGGTCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTAGGTGGCTTATGCCATaGGCTGGCCTACAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVRWLMP*AGLQVP
Trigger: TGGGACTTGTAGGCCAGCCCATGGCATAAGCCACCT...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp TCTAGACCTCGCCCACGTGGACAGACGCTTCCTGTCATGGCTCTGCCTAGAGATGCTGCCTTGTTGACCTaGCCATCAAGTCTTTATACC +
Preference number: 2 (lower is better)
Translates to: SRPRPRGQTLPVMALPRDAALLT*PSSLYT
Trigger: GGTATAAAGACTTGATGGTCAGGTCAACAAGGCAGC...ATCTCTAGGCAGAGCCATGACAGGAAGCGTCTGTCCACGTGGGCGAGGTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR GCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTCAGGAGCAGGGGCCTTaGAGACCCACTAAGGGTCTT +
Preference number: 2 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRQEQGP*RPTKGL
Trigger: AAGACCCTTAGTGGGTCTGCAAGGCCCCTGCTCCTG...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTAGGCTGTGCATGAGCTaGCAGAGAATGGTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRRLCMS*QRMVCP
Trigger: GGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCT...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTGATCCTTTAAAGTTGTaGCCTCCAGTGTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLDPLKL*PPVSGP
Trigger: AGGACCAGACACTGGAGGTCACAACTTTAAAGGATC...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGGGAACAGGCTGTGCATaGGCTGGCAGAGAATGGTCT +
Preference number: 2 (lower is better)
Translates to: VCSTFKPWITGGMESHLQGTGCA*AGREWS
Trigger: AGACCATTCTCTGCCAGCTCATGCACAGCCTGTTCC...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR GCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTTGGCAGAGAATGGTCTaGCCCTGCTCTGAATGCTGG +
Preference number: 2 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRWQRMV*PCSECW
Trigger: CCAGCATTCAGAGCAGGGGCAGACCATTCTCTGCCA...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTACGCACATTTCTCTGTaGGATATAGATCAGGCTGGC +
Preference number: 2 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLTHISL*DIDQAG
Trigger: GCCAGCCTGATCTATATCCCACAGAGAAATGTGCGT...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp AAAAGATGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTGCAGAGGCAGGCAAATCTaGGTTTTGAGGCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: KRWLGSFKVVTSSVWSSCRGRQI*VLRPAW
Trigger: CCAGGCTGGCCTCAAAACTCAGATTTGCCTGCCTCT...GCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTTGTGGTTATTCTGGCTaGCCTAGAACTCACTTTGGA +
Preference number: 2 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLCGYSG*PRTHFG
Trigger: TCCAAAGTGAGTTCTAGGCCAGCCAGAATAACCACA...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGGCTCCAGGGCATACATaGGATGACAGTTGTGTCTCT +
Preference number: 2 (lower is better)
Translates to: VCSTFKPWITGGMESHLQAPGHT*DDSCVS
Trigger: AGAGACACAACTGTCATCTCATGTATGCCCTGGAGC...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGTGTAGACTTCTTAGGTaGCTTATGCCATGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: VCSTFKPWITGGMESHLQCRLLR*LMPWAG
Trigger: GCCAGCCCATGGCATAAGCCACCTAAGAAGTCTACA...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTGCAAGAATGCAGTGTTaGGCCTTTCAACCACTAGAA +
Preference number: 2 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVARMQC*AFQPLE
Trigger: TTCTAGTGGTTGAAAGGCCCAACACTGCATTCTTGC...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTTTCCTTGCAGGCTTTTaGTGGTATACCAACTACTTT +
Preference number: 2 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLFLAGF*WYTNYF
Trigger: AAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAA...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTTGTGTTTTTGGAATTTaGCAAGCTCTTGGCGTGTTT +
Preference number: 2 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVCVFGI*QALGVF
Trigger: AAACACGCCAAGAGCTTGTCAAATTCCAAAAACACA...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR GCA 90 bp TCTAGACCTCGCCCACGTGGACAGACGCTTCCTGTCATGGCTCTGCCTAGAGATTTTAATTGTGTTCTGTaGTTGTTGGATTCCGTAATG +
Preference number: 2 (lower is better)
Translates to: SRPRPRGQTLPVMALPRDFNCVL*LLDSVM
Trigger: CATTACGGAATCCAACAAGCACAGAACACAATTAAA...ATCTCTAGGCAGAGCCATGACAGGAAGCGTCTGTCCACGTGGGCGAGGTCTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTCAACTTGATTTAGAATaGAAAGGTGAAACCTCATCA +
Preference number: 2 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLQLDLE*KGETSS
Trigger: TGATGAGGTTTCACCTTTCCATTCTAAATCAAGTTG...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTATTGTATGGTCATTTTaGTGTCCATTTCTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRIVWSF*CPFLQG
Trigger: TCCCTGCAGAAATGGACACCAAAATGACCATACAAT...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp ATCCTTGAATCATACAACTGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTGGCAAATCTGAGTTTTaGGGCCAGCCTGGTCTACAG +
Preference number: 2 (lower is better)
Translates to: ILESYNWLCLCFWNLTSSGKSEF*GQPGLQ
Trigger: CTGTAGACCAGGCTGGCCTCAAAACTCAGATTTGCC...AGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATTCAAGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CAA 90 bp CTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCACACCTTCCTaGCAGGCTTTTGATGGTATACCAACTACTTTATTTATTTATTTA +
Preference number: 2 (lower is better)
Translates to: LELSKFLALRNPTPS*QAFDGIPTTLFIYL
Trigger: TAAATAAATAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR TCA 90 bp ATCCTTGAATCATACAACTGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTTTATTTAAATTCCCCTaGGCCTACCACCTGGCTCAG +
Preference number: 2 (lower is better)
Translates to: ILESYNWLCLCFWNLTSSLFKFP*AYHLAQ
Trigger: CTGAGCCAGGTGGTAGGCTCAGGGGAATTTAAATAA...AGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATTCAAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 72 bp CTTCACCACGACGGTCAGCCGTGGCTCTTGGTCCACTaGGGGAGCCTCTTAACCGCTCTCCAGCAGATTCGA +
Preference number: 3 (lower is better)
Translates to: LHHDGQPWLLVH*GSLLTALQQIR
Trigger: TCGAATCTGCTGGAGAGCGGTTAAGAGGCTCCCTCAGTGGACCAAGAGCCACGGCTGACCGTCGTGGTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR GCA 72 bp CAGCTAGCTCATGTATCCATGAGGGAGGGGCTGCAGTaGCAGCTCAGAGGACACTCAGGCTGTCCTAGTGAC +
Preference number: 3 (lower is better)
Translates to: QLAHVSMREGLQ*QLRGHSGCPSD
Trigger: GTCACTAGGACAGCCTGAGTGTCCTCTGAGCTGGCACTGCAGCCCCTCCCTCATGGATACATGAGCTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp CTAGACCTCGCCCACGTGGACAGACGCTTCCTGTCATaGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAG +
Preference number: 3 (lower is better)
Translates to: LDLAHVDRRFLS*LCLEMFLGVCE
Trigger: CTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCTGTCCACGTGGGCGAGGTCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR GCA 72 bp AGGCTGTGCATGAGCTGGCAGAGAATGGTCTGCCCCTaGTCTGAATGCTGGGATAACAATGCGCCCCCTACA +
Preference number: 3 (lower is better)
Translates to: RLCMSWQRMVCP*SECWDNNAPPT
Trigger: TGTAGGGGGCGCATTGTTATCCCAGCATTCAGAGCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp GTAGGTGAGCCCACAGCCACATTTGTGGAGTGGGGCTaGTTTGAGCCGTTGTTAAGCCGTCGTGAGGTGCTT +
Preference number: 3 (lower is better)
Translates to: VGEPTATFVEWG*FEPLLSRREVL
Trigger: AAGCACCTCACGACGGCTTAACAACGGCTCAAACCAGCCCCACTCCACAAATGTGGCTGTGGGCTCACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 72 bp GGCTGGCCTAGAACTCACTTTGGAACAGGCTGTGCATaGGCTGGCAGAGAATGGTCTGCCCCTGCTCTGAAT +
Preference number: 3 (lower is better)
Translates to: GWPRTHFGTGCA*AGREWSAPALN
Trigger: ATTCAGAGCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCTGTTCCAAAGTGAGTTCTAGGCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp CACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTaGCTCTCAGGAATCCCACACCTTCCTTGCAGGCTT +
Preference number: 3 (lower is better)
Translates to: HGEMAHWNSASS*LSGIPHLPCRL
Trigger: AAGCCTGCAAGGAAGGTGTGGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp GCTTGTAATCCCAGTGTCCTGACTGACACGGGGAAATaGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: ACNPSVLTDTGK*HTGTQQVPGSQ
Trigger: CTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGTCAGTCAGGACACTGGGATTACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR GCA 72 bp ATGAGCTGGCAGAGAATGGTCTGCCCCTGCTCTGAATaGTGGGATAACAATGCGCCCCCTACAGGTATACTT +
Preference number: 3 (lower is better)
Translates to: MSWQRMVCPCSE*WDNNAPPTGIL
Trigger: AAGTATACCTGTAGGGGGCGCATTGTTATCCCAGCATTCAGAGCAGGGGCAGACCATTCTCTGCCAGCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp AGCTGGCAGAGAATGGTCTGCCCCTGCTCTGAATGCTaGGATAACAATGCGCCCCCTACAGGTATACTTAGT +
Preference number: 3 (lower is better)
Translates to: SWQRMVCPCSEC*DNNAPPTGILS
Trigger: ACTAAGTATACCTGTAGGGGGCGCATTGTTATCCCAGCATTCAGAGCAGGGGCAGACCATTCTCTGCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 72 bp GACACTAGCCAAGCCATCCTGGCTGCCTTGTTGACCTaGCCATCAAGTCTTTATACCCATCATAGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: DTSQAILAALLT*PSSLYTHHSSR
Trigger: CCTGGAGCTATGATGGGTATAAAGACTTGATGGTCAGGTCAACAAGGCAGCCAGGATGGCTTGGCTAGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CAA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCCAGAGGAACCCGGTCTaGAAAAATCAAAACAAGCAA +
Preference number: 3 (lower is better)
Translates to: TRGNGTLELSKFLALRNPQRNPV*KNQNKQ
Trigger: TTGCTTGTTTTGATTTTTCAAGACCGGGTTCCTCTG...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CAA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTAATCCCACACCTTCCTaGCAGGCTTTTGATGGTATA +
Preference number: 3 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVNPTPS*QAFDGI
Trigger: TATACCATCAAAAGCCTGCAAGGAAGGTGTGGGATT...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 72 bp CTTAAATCCAGGGTCCTGGATTTCCCCTCAGATTTCTaGCCGCCATCATTTGTGTGGTTATTCTGGCTGGCC +
Preference number: 3 (lower is better)
Translates to: LKSRVLDFPSDF*PPSFVWLFWLA
Trigger: GGCCAGCCAGAATAACCACACAAATGATGGCGGTCAGAAATCTGAGGGGAAATCCAGGACCCTGGATTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR GCA 72 bp TCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTaGCCACATCTAAGTGGTGAAGATAACAGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: SFKVVTSSVWSS*PHLSGEDNRPK
Trigger: CTTGGGCCTGTTATCTTCACCACTTAGATGTGGGCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp ACAAGCTCTTGGCGTGTTTGCTCTACTTTTAAACCCTaGATCACTGGAGGGATGGAGTCCCACCTTCAGAGA +
Preference number: 3 (lower is better)
Translates to: TSSWRVCSTFKP*ITGGMESHLQR
Trigger: TCTCTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAACACGCCAAGAGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR-3UTR CAA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTCCTTTGGAGATTTGTTaGGAGACAACATCTCGTGTA +
Preference number: 3 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVPLEIC*ETTSRV
Trigger: TACACGAGATGTTGTCTCCAAACAAATCTCCAAAGG...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 72 bp ACTATGAACCTTCTAAACAGTACCAACACTGTCATGTaGCTAATGCTGCCTCTAGACCTCGCCCACGTGGAC +
Preference number: 3 (lower is better)
Translates to: TMNLLNSTNTVM*LMLPLDLAHVD
Trigger: GTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTTAGAAGGTTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp TGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTaGTCCTCCTGCCCACATCTAAGTGGTGAAGATAAC +
Preference number: 3 (lower is better)
Translates to: WLGSFKVVTSSV*SSCPHLSGEDN
Trigger: GTTATCTTCACCACTTAGATGTGGGCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR GCA 72 bp GCAAGTTCCTGGCTCTCAGGAATCCCACACCTTCCTTaGAGGCTTTTGATGGTATACCAACTACTTTATTTA +
Preference number: 3 (lower is better)
Translates to: ASSWLSGIPHLP*RLLMVYQLLYL
Trigger: TAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGGGATTCCTGAGAGCCAGGAACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp ATAAAAATTACATGTGTGTGCACGCACATTTCTCTGTaGGATATAGATCAGGCTGGCCTCAAACTCCCTCGT +
Preference number: 3 (lower is better)
Translates to: IKITCVCTHISL*DIDQAGLKLPR
Trigger: ACGAGGGAGTTTGAGGCCAGCCTGATCTATATCCCACAGAGAAATGTGCGTGCACACACATGTAATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp TTAGTAACCAGAGAGACAAGGCAACTTGATTTAGAATaGAAAGGTGAAACCTCATCACCCCTGGGTACAGTA +
Preference number: 3 (lower is better)
Translates to: LVTRETRQLDLE*KGETSSPLGTV
Trigger: TACTGTACCCAGGGGTGATGAGGTTTCACCTTTCCATTCTAAATCAAGTTGCCTTGTCTCTCTGGTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp TGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTTaGCGTGTTTGCTCTACTTTTAAACCCTGGATCACT +
Preference number: 3 (lower is better)
Translates to: WLCLCFWNLTSS*RVCSTFKPWIT
Trigger: AGTGATCCAGGGTTTAAAAGTAGAGCAAACACGCCAAGAGCTTGTCAAATTCCAAAAACACAAGCATAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CCA 72 bp ATCCTTGAATCATACAACTGGTTATGCTTGTGTTTTTaGAATTTGACAAGCTCTTGGCGTGTTTGCTCTACT +
Preference number: 3 (lower is better)
Translates to: ILESYNWLCLCF*NLTSSWRVCST
Trigger: AGTAGAGCAAACACGCCAAGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATTCAAGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR TCA 72 bp AATCATACAACTGGTTATGCTTGTGTTTTTGGAATTTaGCAAGCTCTTGGCGTGTTTGCTCTACTTTTAAAC +
Preference number: 3 (lower is better)
Translates to: NHTTGYACVFGI*QALGVFALLLN
Trigger: GTTTAAAAGTAGAGCAAACACGCCAAGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp GGCCAGGCAGTGGTGGCCCATGCCGTTAGTCCCAACACTCAGAGGCAGAGGCAGCGTCCTGGAGAGACATaGTCCCTCTCACGGCGACCA +
Preference number: 4 (lower is better)
Translates to: GQAVVAHAVSPNTQRQRQRPGET*SLSRRP
Trigger: TGGTCGCCGTGAGAGGGACCATGTCTCTCCAGGACG...CTGCCTCTGCCTCTGAGTGTTGGGACTAACGGCATGGGCCACCACTGCCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AGTGCCAGCTCAGAGGACACTCAGGCTGTCCTAGTGACCCCGGAAAGACGCAGGACAGAGTGGGGTACTTaGTGGGGGAGTCCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: SASSEDTQAVLVTPERRRTEWGT*WGSPVG
Trigger: CCCCACTGGACTCCCCCACCAAGTACCCCACTCTGT...CCTGCGTCTTTCCGGGGTCACTAGGACAGCCTGAGTGTCCTCTGAGCTGGCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp GGCCAGGCAGTGGTGGCCCATGCCGTTAGTCCCAACACTCAGAGGCAGAGGCAGCCACCCATAGGCAGCTaGTGCAAACGGCATGTAATG +
Preference number: 4 (lower is better)
Translates to: GQAVVAHAVSPNTQRQRQPPIGS*CKRHVM
Trigger: CATTACATGCCGTTTGCAGCAGCTGCCTATGGGTGG...CTGCCTCTGCCTCTGAGTGTTGGGACTAACGGCATGGGCCACCACTGCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCCCAGTGGGGAGTCGCTaGAACAGTAGCCCGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPPVGSR*NSSPGS
Trigger: ACTCCCCGGGCTACTGTTCCAGCGACTCCCCACTGG...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp AACTCACTTTGGAACAGGCTGTGCATGAGCTGGCAGAGAATGGTCTGCCCCTGCGCAGCCAAACCTCCCTaGACCACCCTCCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NSLWNRLCMSWQRMVCPCAAKPP*TTLLFQ
Trigger: CTGGAAGAGGAGGGTGGTTCAGGGAGGTTTGGCTGC...GCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCTGTTCCAAAGTGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCACACTGGATACCTTTTaGCACCCAGGCGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPTLDTF*HPGGPQ
Trigger: CTGGGGGCCGCCTGGGTGGCAAAAGGTATCCAGTGT...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CAA 72 bp ACAGCCACATTTGTGGAGTGGGGCTGGTTTGAGCCGTaGTTAAGCCGTCGTGAGGTGCTTGTGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TATFVEWGWFEP*LSRREVLVWGS
Trigger: GGAGCCCCACACAAGCACCTCACGACGGCTTAACAACGGCTCAAACCAGCCCCACTCCACAAATGTGGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCGCTGGTGGAGAAGGGTaGAGCCTGCTGCGATATCAC +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPAGGEG*SLLRYH
Trigger: GTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGC...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp GGCCAGGCAGTGGTGGCCCATGCCGTTAGTCCCAACACTCAGAGGCAGAGGCAGGAAAGCTTATGTGAATaGAATCCCTGTACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: GQAVVAHAVSPNTQRQRQESLCE*NPCTAA
Trigger: GGCTGCAGTACAGGGATTTCATTCACATAAGCTTTC...CTGCCTCTGCCTCTGAGTGTTGGGACTAACGGCATGGGCCACCACTGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTCCAGGGCCCGAATCATaGCGTCAGGCATGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLPGPES*RQACGQ
Trigger: TTGACCACATGCCTGACGTCATGATTCGGGCCCTGG...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCCAGGTGGGTACAGAGTaGGGTACTTGGTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPQVGTE*GTWWGS
Trigger: ACTCCCCCACCAAGTACCCCACTCTGTACCCACCTG...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTCCCTCCTCTTCCAGGTaGATGATCCTGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVPSSSR*MILPGG
Trigger: CCCACCTGGCAGGATCATCCACCTGGAAGAGGAGGG...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AACTCACTTTGGAACAGGCTGTGCATGAGCTGGCAGAGAATGGTCTGCCCCTGCCACCTCGCTCTGTACTaGGCAGCAGAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: NSLWNRLCMSWQRMVCPCHLALY*AAEQQP
Trigger: TGGCTGCTGTTCTGCTGCCCAGTACAGAGCGAGGTG...GCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCTGTTCCAAAGTGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTACACTTGAGCCGCCTTaGCCTGGGCAGGAGACGCAG +
Preference number: 4 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRTLEPP*PGQETQ
Trigger: CTGCGTCTCCTGCCCAGGGCAAGGCGGCTCAAGTGT...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp AAAAGATGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTGCTCTCCAAGAAGAGGCTaGGTCAGGGCCCCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KRWLGSFKVVTSSVWSSCSPRRG*VRAPWV
Trigger: CACCCAGGGGGCCCTGACTCAGCCTCTTCTTGGAGA...GCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGTCAGGGCCCCCTGGGTaGCCTCATCCAGTTCAGTTG +
Preference number: 4 (lower is better)
Translates to: VCSTFKPWITGGMESHLQSGPPG*PHPVQL
Trigger: CAACTGAACTGGATGAGGGCACCCAGGGGGCCCTGA...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCCGTACTCTATGTCTCTaGCTCTGCAACAGTCGCCAC +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPRTLCL*LCNSRH
Trigger: GTGGCGACTGTTGCAGAGCCAGAGACATAGAGTACG...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTCCTCTTCCAGGTGGATaGTCCTGCCAGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRPLPGG*SCQVGT
Trigger: TGTACCCACCTGGCAGGATCATCCACCTGGAAGAGG...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTCCCATAGGCAGCTGCTaGAAACGGCATGTAATGATG +
Preference number: 4 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLPIGSC*KRHVMM
Trigger: CATCATTACATGCCGTTTGCAGCAGCTGCCTATGGG...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGACAGGTCGGCAGTGCTaGAAAACGCCACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VCSTFKPWITGGMESHLQTGRQC*KTPPWC
Trigger: ACACCAGGGTGGCGTTTTCCAGCACTGCCGACCTGT...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTTTGTCTTGTTGCTGGTaGAGAAGGGTGAAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLLSCCW*RRVKPA
Trigger: AGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAA...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCCTATCAGGATCTTACTaGATTCTGCTTCGTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPLSGSY*ILLRVP
Trigger: GGGCACACGAAGCAGAATTCAGTAAGATCCTGATAG...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp CACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGGACAGACGCTTCTGGTCACCTTCCACTaGATCGTACTCTATGTCTCT +
Preference number: 4 (lower is better)
Translates to: HCHVTNAASRPRPRGQTLLVTFH*IVLYVS
Trigger: AGAGACATAGAGTACGATGCAGTGGAAGGTGACCAG...AAGCGTCTGTCCACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp CCCGGAAAGACGCAGGCAAGTATAAAGTGCTCATCTGTTGTCTTAAAGTTCAGAACACCAAGTCGTCGCTaGCTAGAGACCAGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PGKTQASIKCSSVVLKFRTPSRR*LETSAG
Trigger: GCCGGCGCTGGTCTCTAGCCAGCGACGACTTGGTGT...TCTGAACTTTAAGACAACAGATGAGCACTTTATACTTGCCTGCGTCTTTCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGGGAGGCTCCCGGCTGTaGCTGATATTGTCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VCSTFKPWITGGMESHLQGGSRL*LILSCC
Trigger: GCAACAAGACAATATCAGCCACAGCCGGGAGCCTCC...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTTGTACTGCAGCCCTGTaGTCTTCAGGATGGAGGCGA +
Preference number: 4 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRCTAAL*SSGWRR
Trigger: TCGCCTCCATCCTGAAGACCACAGGGCTGCAGTACA...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCGGTGCATATAATAACTaGCAGGAGAACAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPGAYNN*QENKED
Trigger: GTCCTCCTTGTTCTCCTGGCAGTTATTATATGCACC...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGGAGAAGGGTGAAGCCTaGTGCGATATCACTAGGCAC +
Preference number: 4 (lower is better)
Translates to: VCSTFKPWITGGMESHLQEKGEA*CDITRH
Trigger: GTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTC...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp AGACGCTTCCTGTCATGGCTCTGCCTAGAGATGTTCCTTGGGGTCTGTGAGGTTCCGTACCAACAGCCATaGAGCAAGATCTTGTACTTC +
Preference number: 4 (lower is better)
Translates to: RRFLSWLCLEMFLGVCEVPYQQP*SKILYF
Trigger: GAAGTACAAGATCTTGCTGCATGGCTGTTGGTACGG...AACCTCACAGACCCCAAGGAACATCTCTAGGCAGAGCCATGACAGGAAGCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTCTGTGGTCTTCAGGATaGAGGCGAAGTGGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRLWSSG*RRSGSC
Trigger: ACAACTGCCACTTCGCCTCCATCCTGAAGACCACAG...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGGATGATCCTGCCAGGTaGGTACAGAGTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: VCSTFKPWITGGMESHLQDDPAR*VQSGVL
Trigger: AAGTACCCCACTCTGTACCCACCTGGCAGGATCATC...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp ACACGGGGAAATGGCACACTGGAACTCAGCAAGTTCCTGGCTCTCAGGAATCCCGTCAATCAGCATCTTTaGGCCTATCAGGATCTTACT +
Preference number: 4 (lower is better)
Translates to: TRGNGTLELSKFLALRNPVNQHL*AYQDLT
Trigger: AGTAAGATCCTGATAGGCCCAAAGATGCTGATTGAC...GGGATTCCTGAGAGCCAGGAACTTGCTGAGTTCCAGTGTGCCATTTCCCCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp AAAAGATGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTGCGATACAACGTCAGACTaGCAATCCACCACAGCACAC +
Preference number: 4 (lower is better)
Translates to: KRWLGSFKVVTSSVWSSCDTTSD*QSTTAH
Trigger: GTGTGCTGTGGTGGATTGTCAGTCTGACGTTGTATC...GCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AAAAGATGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTGCACTGTCCTGTCACACTaGATACCTTTTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: KRWLGSFKVVTSSVWSSCTVLSH*IPFATQ
Trigger: CTGGGTGGCAAAAGGTATCCAGTGTGACAGGACAGT...GCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGACAGACTCCTTCCTGTaGTCCAGAACCACTATGAAG +
Preference number: 4 (lower is better)
Translates to: VCSTFKPWITGGMESHLQTDSFL*SRTTMK
Trigger: CTTCATAGTGGTTCTGGACCACAGGAAGGAGTCTGT...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp CCCGGAAAGACGCAGGCAAGTATAAAGTGCTCATCTGTTGTCTTAAAGTTCAGATCCAGCCTCCTTCTGTaGGTGAGATACAACGTCAGA +
Preference number: 4 (lower is better)
Translates to: PGKTQASIKCSSVVLKFRSSLLL*VRYNVR
Trigger: TCTGACGTTGTATCTCACGCACAGAAGGAGGCTGGA...TCTGAACTTTAAGACAACAGATGAGCACTTTATACTTGCCTGCGTCTTTCCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp AAAAGATGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTGCCTGATATTGTCTTGTTaGTGGTGGAGAAGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KRWLGSFKVVTSSVWSSCLILSC*WWRRVK
Trigger: CTTCACCCTTCTCCACCAGCAACAAGACAATATCAG...GCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp CCACACCTTCCTTGCAGGCTTTTGATGGTATACCAACTACTTTATTTATTTATTAGCCCAGACCATCTCTaGCAGGAAGAGCGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: PHLPCRLLMVYQLLYLFISPDHL*QEERQA
Trigger: CGCCTGGCGCTCTTCCTGCCAGAGATGGTCTGGGCT...AATAAATAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp AAAAGATGGCTTGGATCCTTTAAAGTTGTGACCTCCAGTGTCTGGTCCTCCTGCATATTGTCTTGTTGCTaGTGGAGAAGGGTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KRWLGSFKVVTSSVWSSCILSCC*WRRVKP
Trigger: AGGCTTCACCCTTCTCCACCAGCAACAAGACAATAT...GCAGGAGGACCAGACACTGGAGGTCACAACTTTAAAGGATCCAAGCCATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp CCACACCTTCCTTGCAGGCTTTTGATGGTATACCAACTACTTTATTTATTTATTGGTGGGGGAGTCCAGTaGGGAGTCGCTGGAACAGTA +
Preference number: 4 (lower is better)
Translates to: PHLPCRLLMVYQLLYLFIGGGVQ*GVAGTV
Trigger: TACTGTTCCAGCGACTCCCCACTGGACTCCCCCACC...AATAAATAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp ATCCTTGAATCATACAACTGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTTCCTGCACAGCCCCGTaGACGGGTTCCTGTAGATGT +
Preference number: 4 (lower is better)
Translates to: ILESYNWLCLCFWNLTSSSCTAP*TGSCRC
Trigger: ACATCTACAGGAACCCGTTCACGGGGCTGTGCAGGA...AGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATTCAAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp CCACACCTTCCTTGCAGGCTTTTGATGGTATACCAACTACTTTATTTATTTATTTTCCTGAGGCTGTCCTaGTGTGTGGGTCACGACCTC +
Preference number: 4 (lower is better)
Translates to: PHLPCRLLMVYQLLYLFIFLRLS*CVGHDL
Trigger: GAGGTCGTGACCCACACACCAGGACAGCCTCAGGAA...AATAAATAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
3UTR CAA 72 bp AGCAAGTTCCTGGCTCTCAGGAATCCCACACCTTCCTaGCAGGCTTTTGATGGTATACCAACTACTTTATTT +
Preference number: 4 (lower is better)
Translates to: SKFLALRNPTPS*QAFDGIPTTLF
Trigger: AAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGGGATTCCTGAGAGCCAGGAACTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR TCA 90 bp CCACACCTTCCTTGCAGGCTTTTGATGGTATACCAACTACTTTATTTATTTATTTCTAACTCAGTTTCCTaGGGCTGTCCTGGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PHLPCRLLMVYQLLYLFISNSVS*GCPGVW
Trigger: CCACACACCAGGACAGCCTCAGGAAACTGAGTTAGA...AATAAATAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR GCA 90 bp ATCCTTGAATCATACAACTGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTATGAAATCCCTGTACTaGAGCCCTGTGGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ILESYNWLCLCFWNLTSSMKSLY*SPVVFR
Trigger: CCTGAAGACCACAGGGCTGCAGTACAGGGATTTCAT...AGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATTCAAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp CCACACCTTCCTTGCAGGCTTTTGATGGTATACCAACTACTTTATTTATTTATTTGGAAAACGCCACCCTaGTGTTATCATCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: PHLPCRLLMVYQLLYLFIWKTPP*CYHPAQ
Trigger: TTGGGCAGGATGATAACACCAGGGTGGCGTTTTCCA...AATAAATAAATAAAGTAGTTGGTATACCATCAAAAGCCTGCAAGGAAGGTGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CCA 90 bp ATCCTTGAATCATACAACTGGTTATGCTTGTGTTTTTGGAATTTGACAAGCTCTGCGACACTGAAGGCTTaGCTCAGAATCCCATCATTG +
Preference number: 4 (lower is better)
Translates to: ILESYNWLCLCFWNLTSSATLKA*LRIPSL
Trigger: CAATGATGGGATTCTGAGCCAAGCCTTCAGTGTCGC...AGAGCTTGTCAAATTCCAAAAACACAAGCATAACCAGTTGTATGATTCAAGGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp GCCACCCTGGTGTTATCATCCTGCCCAACGCAGCAGCAGCAGAACTaGACCCGGGTCTCCCACACGCTCTTCGCAGCCGTCTTCAGGCCA +
Preference number: 5 (lower is better)
Translates to: ATLVLSSCPTQQQQN*TRVSHTLFAAVFRP
Trigger: TGGCCTGAAGACGGCTGCGAAGAGCGTGTGGGAGACCCGGGTGCAGTTCTGCTGCTGCTGCGTTGGGCAGGATGATAACACCAGGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp GGCCAGGCAGTGGTGGCCCATGCCGTTAGTCCCAACACTCAGAGGCAGAGGCAGTACAGAGTGGGGTACTaGGTGGGGGAGTCCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GQAVVAHAVSPNTQRQRQYRVGY*VGESSG
Trigger: CCCACTGGACTCCCCCACCAAGTACCCCACTCTGTA...CTGCCTCTGCCTCTGAGTGTTGGGACTAACGGCATGGGCCACCACTGCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp GGCTGTCCTGGTGTGTGGGTCACGACCTCCGGAGGCTCCCGGCTGTaGCTGATATTGTCTTGTTGCTGGTGGAGAAGGGTGAAGCCTGCT +
Preference number: 5 (lower is better)
Translates to: GCPGVWVTTSGGSRL*LILSCCWWRRVKPA
Trigger: AGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGACCCACACACCAGGACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp AGCTCCAGGGTCTCACTCTCGGCAGACAGGTCGGTCAGGACGTCCTaGAGAGACATGGTCCCTCTCACGGCGACCACAACAGACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SSRVSLSADRSVRTS*RDMVPLTATTTDSF
Trigger: GAAGGAGTCTGTTGTGGTCGCCGTGAGAGGGACCATGTCTCTCCAGGACGTCCTGACCGACCTGTCTGCCGAGAGTGAGACCCTGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp GGCCAGGCAGTGGTGGCCCATGCCGTTAGTCCCAACACTCAGAGGCAGAGGCAGCTCAGGATCCTCCTCTaGAGGTCCTCCATGTTGGTC +
Preference number: 5 (lower is better)
Translates to: GQAVVAHAVSPNTQRQRQLRILL*RSSMLV
Trigger: GACCAACATGGAGGACCTCAAGAGGAGGATCCTGAG...CTGCCTCTGCCTCTGAGTGTTGGGACTAACGGCATGGGCCACCACTGCCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp TCTCACTCTCGGCAGACAGGTCGGTCAGGACGTCCTGGAGAGACATaGTCCCTCTCACGGCGACCACAACAGACTCCTTCCTGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: SHSRQTGRSGRPGET*SLSRRPQQTPSCGP
Trigger: TGGACCACAGGAAGGAGTCTGTTGTGGTCGCCGTGAGAGGGACCATGTCTCTCCAGGACGTCCTGACCGACCTGTCTGCCGAGAGTGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp GGCCAGGCAGTGGTGGCCCATGCCGTTAGTCCCAACACTCAGAGGCAGAGGCAGCGGCTGTGGCTGATATaGTCTTGTTGCTGGTGGAGA +
Preference number: 5 (lower is better)
Translates to: GQAVVAHAVSPNTQRQRQRLWLI*SCCWWR
Trigger: TCTCCACCAGCAACAAGACAATATCAGCCACAGCCG...CTGCCTCTGCCTCTGAGTGTTGGGACTAACGGCATGGGCCACCACTGCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp GGCGATGATGCCAATGACAACTGTCCTGTCACACTGGATACCTTTTaGCACCCAGGCGGCCCCCAGAGAAGCCCAGACCATCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GDDANDNCPVTLDTF*HPGGPQRSPDHLWQ
Trigger: CTGCCAGAGATGGTCTGGGCTTCTCTGGGGGCCGCCTGGGTGGCAAAAGGTATCCAGTGTGACAGGACAGTTGTCATTGGCATCATCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp GTCACGACCTCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTTaGTGGTGGAGAAGGGTGAAGCCTGCTGCGATATCACTAGGCACC +
Preference number: 5 (lower is better)
Translates to: VTTSGGSRLWLILSC*WWRRVKPAAISLGT
Trigger: GGTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp ACCTTTTGCCACCCAGGCGGCCCCCAGAGAAGCCCAGACCATCTCTaGCAGGAAGAGCGCCAGGCGGATATAGAGCAGCTTAGACATAGA +
Preference number: 5 (lower is better)
Translates to: TFCHPGGPQRSPDHL*QEERQADIEQLRHR
Trigger: TCTATGTCTAAGCTGCTCTATATCCGCCTGGCGCTCTTCCTGCCAGAGATGGTCTGGGCTTCTCTGGGGGCCGCCTGGGTGGCAAAAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp ACGACCTCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTTGCTaGTGGAGAAGGGTGAAGCCTGCTGCGATATCACTAGGCACCAGG +
Preference number: 5 (lower is better)
Translates to: TTSGGSRLWLILSCC*WRRVKPAAISLGTR
Trigger: CCTGGTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp ACAATGACGGTGGCGATGATGCCAATGACAACTGTCCTGTCACACTaGATACCTTTTGCCACCCAGGCGGCCCCCAGAGAAGCCCAGACC +
Preference number: 5 (lower is better)
Translates to: TMTVAMMPMTTVLSH*IPFATQAAPREAQT
Trigger: GGTCTGGGCTTCTCTGGGGGCCGCCTGGGTGGCAAAAGGTATCCAGTGTGACAGGACAGTTGTCATTGGCATCATCGCCACCGTCATTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp ACCTCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTTGCTGGTaGAGAAGGGTGAAGCCTGCTGCGATATCACTAGGCACCAGGTCT +
Preference number: 5 (lower is better)
Translates to: TSGGSRLWLILSCCW*RRVKPAAISLGTRS
Trigger: AGACCTGGTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp TACGTGCTGAGCAAGACTCCACCGGGACAGTCCAGCCTCCTTCTGTaGGTGAGATACAACGTCAGACTGACAATCCACCACAGCACACGC +
Preference number: 5 (lower is better)
Translates to: YVLSKTPPGQSSLLL*VRYNVRLTIHHSTR
Trigger: GCGTGTGCTGTGGTGGATTGTCAGTCTGACGTTGTATCTCACGCACAGAAGGAGGCTGGACTGTCCCGGTGGAGTCTTGCTCAGCACGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp GAAGTGTCTGCTCTCCAAGAAGAGGCTGAGTCAGGGCCCCCTGGGTaGCCTCATCCAGTTCAGTTGGAAAGTTATCAGGGCTTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: EVSALQEEAESGPPG*PHPVQLESYQGFLR
Trigger: TCGGAGGAAGCCCTGATAACTTTCCAACTGAACTGGATGAGGGCACCCAGGGGGCCCTGACTCAGCCTCTTCTTGGAGAGCAGACACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp TACTGCAGCCCTGTGGTCTTCAGGATGGAGGCGAAGTGGCAGTTGTaGTGGTCACCTTCCACTGCATCGTACTCTATGTCTCTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: YCSPVVFRMEAKWQL*WSPSTASYSMSLAL
Trigger: CAGAGCCAGAGACATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAGACCACAGGGCTGCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp TGCAGCCCTGTGGTCTTCAGGATGGAGGCGAAGTGGCAGTTGTGCTaGTCACCTTCCACTGCATCGTACTCTATGTCTCTGGCTCTGCAA +
Preference number: 5 (lower is better)
Translates to: CSPVVFRMEAKWQLC*SPSTASYSMSLALQ
Trigger: TTGCAGAGCCAGAGACATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAGACCACAGGGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp CTTCAGGATGGAGGCGAAGTGGCAGTTGTGCTGGTCACCTTCCACTaGATCGTACTCTATGTCTCTGGCTCTGCAACAGTCGCCACCAAT +
Preference number: 5 (lower is better)
Translates to: LQDGGEVAVVLVTFH*IVLYVSGSATVATN
Trigger: ATTGGTGGCGACTGTTGCAGAGCCAGAGACATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp TCTAGACCTCGCCCACGTGGACAGACGCTTCCTGTCATGGCTCTGCCTAGAGATAGCGACACTGAAGGCTaGGCTCAGAATCCCATCATT +
Preference number: 5 (lower is better)
Translates to: SRPRPRGQTLPVMALPRDSDTEG*AQNPII
Trigger: AATGATGGGATTCTGAGCCAAGCCTTCAGTGTCGCT...ATCTCTAGGCAGAGCCATGACAGGAAGCGTCTGTCCACGTGGGCGAGGTCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS TCA 90 bp CAGGCATGTGGTCAATCAGCATCTTTGGGCCTATCAGGATCTTACTaGATTCTGCTTCGTGTGCCCACCTCGCTCTGTACTGGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QACGQSASLGLSGSY*ILLRVPTSLCTGQQ
Trigger: CTGCTGCCCAGTACAGAGCGAGGTGGGCACACGAAGCAGAATTCAGTAAGATCCTGATAGGCCCAAAGATGCTGATTGACCACATGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp CAGCATCTTTGGGCCTATCAGGATCTTACTGAATTCTGCTTCGTGTaGCCACCTCGCTCTGTACTGGGCAGCAGAACAGCAGCCAAACCT +
Preference number: 5 (lower is better)
Translates to: QHLWAYQDLTEFCFV*PPRSVLGSRTAAKP
Trigger: AGGTTTGGCTGCTGTTCTGCTGCCCAGTACAGAGCGAGGTGGGCACACGAAGCAGAATTCAGTAAGATCCTGATAGGCCCAAAGATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp AAATCCCTGTACTGCAGCCCTGTGGTCTTCAGGATGGAGGCGAAGTaGCAGTTGTGCTGGTCACCTTCCACTGCATCGTACTCTATGTCT +
Preference number: 5 (lower is better)
Translates to: KSLYCSPVVFRMEAK*QLCWSPSTASYSMS
Trigger: AGACATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAGACCACAGGGCTGCAGTACAGGGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp GTGGCTGATATTGTCTTGTTGCTGGTGGAGAAGGGTGAAGCCTGCTaGGATATCACTAGGCACCAGGTCTGTGTCAGAGAAGTAGGTGGA +
Preference number: 5 (lower is better)
Translates to: VADIVLLLVEKGEAC*DITRHQVCVREVGG
Trigger: TCCACCTACTTCTCTGACACAGACCTGGTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 90 bp CAGGGCCCGAATCATGACGTCAGGCATGTGGTCAATCAGCATCTTTaGGCCTATCAGGATCTTACTGAATTCTGCTTCGTGTGCCCACCT +
Preference number: 5 (lower is better)
Translates to: QGPNHDVRHVVNQHL*AYQDLTEFCFVCPP
Trigger: AGGTGGGCACACGAAGCAGAATTCAGTAAGATCCTGATAGGCCCAAAGATGCTGATTGACCACATGCCTGACGTCATGATTCGGGCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp CCCGGAAAGACGCAGGCAAGTATAAAGTGCTCATCTGTTGTCTTAAAGTTCAGACACACTGGATACCTTTaGCCACCCAGGCGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PGKTQASIKCSSVVLKFRHTGYL*PPRRPP
Trigger: TGGGGGCCGCCTGGGTGGCAAAAGGTATCCAGTGTG...TCTGAACTTTAAGACAACAGATGAGCACTTTATACTTGCCTGCGTCTTTCCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp AACTCACTTTGGAACAGGCTGTGCATGAGCTGGCAGAGAATGGTCTGCCCCTGCCCTCATCCAGTTCAGTaGGAAAGTTATCAGGGCTTC +
Preference number: 5 (lower is better)
Translates to: NSLWNRLCMSWQRMVCPCPHPVQ*ESYQGF
Trigger: GAAGCCCTGATAACTTTCCAACTGAACTGGATGAGG...GCAGGGGCAGACCATTCTCTGCCAGCTCATGCACAGCCTGTTCCAAAGTGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTTTGAGGTCCTCCATGTaGGTCACACTTAACCTGGGG +
Preference number: 5 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRLRSSM*VTLNLG
Trigger: CCCCAGGTTAAGTGTGACCAACATGGAGGACCTCAA...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp TCTCATGCTGACACACACGATGGCCAACACGGTGCATATAATAACTaGCAGGAGAACAAGGAGGACTATCAGGTACGTGCTGAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: SHADTHDGQHGAYNN*QENKEDYQVRAEQD
Trigger: GTCTTGCTCAGCACGTACCTGATAGTCCTCCTTGTTCTCCTGGCAGTTATTATATGCACCGTGTTGGCCATCGTGTGTGTCAGCATGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp AAACAGTACCAACACTGTCATGTGACTAATGCTGCCTCTAGACCTCGCCCACGTGTGGCTGATATTGTCTaGTTGCTGGTGGAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: KQYQHCHVTNAASRPRPRVADIV*LLVEKG
Trigger: ACCCTTCTCCACCAGCAACAAGACAATATCAGCCAC...ACGTGGGCGAGGTCTAGAGGCAGCATTAGTCACATGACAGTGTTGGTACTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 90 bp GGAAAGTTATCAGGGCTTCCTCCGAACAGTCCGTACCAACAGCCATaGAGCAAGATCTTGTACTTCGGCTTATTGCAGTTAGCGATCACT +
Preference number: 5 (lower is better)
Translates to: GKLSGLPPNSPYQQP*SKILYFGLLQLAIT
Trigger: AGTGATCGCTAACTGCAATAAGCCGAAGTACAAGATCTTGCTGCATGGCTGTTGGTACGGACTGTTCGGAGGAAGCCCTGATAACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS-3UTR CAA 90 bp GTTTGCTCTACTTTTAAACCCTGGATCACTGGAGGGATGGAGTCCCACCTTCAGCCATGCAGCAAGATCTaGTACTTCGGCTTATTGCAG +
Preference number: 5 (lower is better)
Translates to: VCSTFKPWITGGMESHLQPCSKI*YFGLLQ
Trigger: CTGCAATAAGCCGAAGTACAAGATCTTGCTGCATGG...CTGAAGGTGGGACTCCATCCCTCCAGTGATCCAGGGTTTAAAAGTAGAGCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GCGCCGGCTCCTAGGCTGTGCCCCACCAGAACGAGCTaGTACTCCGGAGCGACACTGAAGGCTTGGCTCAGA +
Preference number: 6 (lower is better)
Translates to: APAPRLCPTRTS*YSGATLKAWLR
Trigger: TCTGAGCCAAGCCTTCAGTGTCGCTCCGGAGTACCAGCTCGTTCTGGTGGGGCACAGCCTAGGAGCCGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp CACCCAGGCGGCCCCCAGAGAAGCCCAGACCATCTCTaGCAGGAAGAGCGCCAGGCGGATATAGAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: HPGGPQRSPDHL*QEERQADIEQL
Trigger: AAGCTGCTCTATATCCGCCTGGCGCTCTTCCTGCCAGAGATGGTCTGGGCTTCTCTGGGGGCCGCCTGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp GTGTTATCATCCTGCCCAACGCAGCAGCAGCAGAACTaGACCCGGGTCTCCCACACGCTCTTCGCAGCCGTC +
Preference number: 6 (lower is better)
Translates to: VLSSCPTQQQQN*TRVSHTLFAAV
Trigger: GACGGCTGCGAAGAGCGTGTGGGAGACCCGGGTGCAGTTCTGCTGCTGCTGCGTTGGGCAGGATGATAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp ACAGCTCAAAAGACCCGGGGAACACCAAGTCGTCGCTaGCTAGAGACCAGCGCCGGCCGAACAGCACCATCC +
Preference number: 6 (lower is better)
Translates to: TAQKTRGTPSRR*LETSAGRTAPS
Trigger: GGATGGTGCTGTTCGGCCGGCGCTGGTCTCTAGCCAGCGACGACTTGGTGTTCCCCGGGTCTTTTGAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GGTGTGTGGGTCACGACCTCCGGAGGCTCCCGGCTGTaGCTGATATTGTCTTGTTGCTGGTGGAGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: GVWVTTSGGSRL*LILSCCWWRRV
Trigger: CACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGACCCACACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GTCTCACTCTCGGCAGACAGGTCGGTCAGGACGTCCTaGAGAGACATGGTCCCTCTCACGGCGACCACAACA +
Preference number: 6 (lower is better)
Translates to: VSLSADRSVRTS*RDMVPLTATTT
Trigger: TGTTGTGGTCGCCGTGAGAGGGACCATGTCTCTCCAGGACGTCCTGACCGACCTGTCTGCCGAGAGTGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp ACCACCCTCCTCTTCCAGGTGGATGATCCTGCCAGGTaGGTACAGAGTGGGGTACTTGGTGGGGGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: TTLLFQVDDPAR*VQSGVLGGGVQ
Trigger: CTGGACTCCCCCACCAAGTACCCCACTCTGTACCCACCTGGCAGGATCATCCACCTGGAAGAGGAGGGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp GTCACGACCTCCGGAGGCTCCCGGCTGTGGCTGATATaGTCTTGTTGCTGGTGGAGAAGGGTGAAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: VTTSGGSRLWLI*SCCWWRRVKPA
Trigger: AGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp GGTCACGACCTCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTaGCTGGTGGAGAAGGGTGAAGCCTGCTGCGATATCACTAGGCAC +
Preference number: 6 (lower is better)
Translates to: GHDLRRLPAVADIVL*LVEKGEACCDITRH
Trigger: GTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp GTGGGTCACGACCTCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTaGTTGCTGGTGGAGAAGGGTGAAGCCTGCTGCGATATCACTAGG +
Preference number: 6 (lower is better)
Translates to: VGHDLRRLPAVADIV*LLVEKGEACCDITR
Trigger: CCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp GGTGTGTGGGTCACGACCTCCGGAGGCTCCCGGCTGTGGCTGATATaGTCTTGTTGCTGGTGGAGAAGGGTGAAGCCTGCTGCGATATCA +
Preference number: 6 (lower is better)
Translates to: GVWVTTSGGSRLWLI*SCCWWRRVKPAAIS
Trigger: TGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAGGTCGTGACCCACACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS TCA 72 bp CTGCCAGGAGAACAAGGAGGACTATCAGGTACGTGCTaGGCAAGACTCCACCGGGACAGTCCAGCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: LPGEQGGLSGTC*ARLHRDSPASF
Trigger: GAAGGAGGCTGGACTGTCCCGGTGGAGTCTTGCTCAGCACGTACCTGATAGTCCTCCTTGTTCTCCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp GCCAATGACAACTGTCCTGTCACACTGGATACCTTTTaGCACCCAGGCGGCCCCCAGAGAAGCCCAGACCAT +
Preference number: 6 (lower is better)
Translates to: ANDNCPVTLDTF*HPGGPQRSPDH
Trigger: ATGGTCTGGGCTTCTCTGGGGGCCGCCTGGGTGGCAAAAGGTATCCAGTGTGACAGGACAGTTGTCATTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp TGGAGAACAGGTCGGCAGTGCTGGAAAACGCCACCCTaGTGTTATCATCCTGCCCAACGCAGCAGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: WRTGRQCWKTPP*CYHPAQRSSSR
Trigger: TCTGCTGCTGCTGCGTTGGGCAGGATGATAACACCAGGGTGGCGTTTTCCAGCACTGCCGACCTGTTCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp CTCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTaGCTGGTGGAGAAGGGTGAAGCCTGCTGCGATATC +
Preference number: 6 (lower is better)
Translates to: LRRLPAVADIVL*LVEKGEACCDI
Trigger: GATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp GAGTCAGGGCCCCCTGGGTGCCCTCATCCAGTTCAGTaGGAAAGTTATCAGGGCTTCCTCCGAACAGTCCGT +
Preference number: 6 (lower is better)
Translates to: ESGPPGCPHPVQ*ESYQGFLRTVR
Trigger: ACGGACTGTTCGGAGGAAGCCCTGATAACTTTCCAACTGAACTGGATGAGGGCACCCAGGGGGCCCTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS TCA 72 bp CGACAAAGTCCTTGGAGTACTCGTAAAGGGATTTGCTaGGCAGCCCCCTGGGCGGGGAGAAGGCATAAGCAC +
Preference number: 6 (lower is better)
Translates to: RQSPWSTRKGIC*AAPWAGRRHKH
Trigger: GTGCTTATGCCTTCTCCCCGCCCAGGGGGCTGCTCAGCAAATCCCTTTACGAGTACTCCAAGGACTTTGTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp CCAGTCAGTAACCGGTTTGAGCTGTTACTGTCCAGGTaGTCCGGGATGCATGGGGGATACGGAGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: PVSNRFELLLSR*SGMHGGYGAIF
Trigger: GAAGATGGCTCCGTATCCCCCATGCATCCCGGAGCACCTGGACAGTAACAGCTCAAACCGGTTACTGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp TCCGGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTTaGTGGTGGAGAAGGGTGAAGCCTGCTGCGATATCA +
Preference number: 6 (lower is better)
Translates to: SGGSRLWLILSC*WWRRVKPAAIS
Trigger: TGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GTGGCGATGATGCCAATGACAACTGTCCTGTCACACTaGATACCTTTTGCCACCCAGGCGGCCCCCAGAGAA +
Preference number: 6 (lower is better)
Translates to: VAMMPMTTVLSH*IPFATQAAPRE
Trigger: TTCTCTGGGGGCCGCCTGGGTGGCAAAAGGTATCCAGTGTGACAGGACAGTTGTCATTGGCATCATCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GGCTCCCGGCTGTGGCTGATATTGTCTTGTTGCTGGTaGAGAAGGGTGAAGCCTGCTGCGATATCACTAGGC +
Preference number: 6 (lower is better)
Translates to: GSRLWLILSCCW*RRVKPAAISLG
Trigger: GCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GCTGGTCACCTTCCACTGCATCGTACTCTATGTCTCTaGCTCTGCAACAGTCGCCACCAATCCTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: AGHLPLHRTLCL*LCNSRHQSCTA
Trigger: GGCTGTGCAGGATTGGTGGCGACTGTTGCAGAGCCAGAGACATAGAGTACGATGCAGTGGAAGGTGACCAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp TACTGCAGCCCTGTGGTCTTCAGGATGGAGGCGAAGTaGCAGTTGTGCTGGTCACCTTCCACTGCATCGTAC +
Preference number: 6 (lower is better)
Translates to: YCSPVVFRMEAK*QLCWSPSTASY
Trigger: GTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAGACCACAGGGCTGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GTCCCTCTCACGGCGACCACAACAGACTCCTTCCTGTaGTCCAGAACCACTATGAAGGGCAGCTCATACACC +
Preference number: 6 (lower is better)
Translates to: VPLTATTTDSFL*SRTTMKGSSYT
Trigger: GGTGTATGAGCTGCCCTTCATAGTGGTTCTGGACCACAGGAAGGAGTCTGTTGTGGTCGCCGTGAGAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp AGTCAGGGCCCCCTGGGTGCCCTCATCCAGTTCAGTTaGAAAGTTATCAGGGCTTCCTCCGAACAGTCCGTA +
Preference number: 6 (lower is better)
Translates to: SQGPLGALIQFS*KVIRASSEQSV
Trigger: TACGGACTGTTCGGAGGAAGCCCTGATAACTTTCCAACTGAACTGGATGAGGGCACCCAGGGGGCCCTGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp CAGAACGAGCTGGTACTCCGGAGCGACACTGAAGGCTaGGCTCAGAATCCCATCATTGACCAGTCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: QNELVLRSDTEG*AQNPIIDQSAV
Trigger: CACCGCAGACTGGTCAATGATGGGATTCTGAGCCAAGCCTTCAGTGTCGCTCCGGAGTACCAGCTCGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp CTGTACTGCAGCCCTGTGGTCTTCAGGATGGAGGCGAAGTGGCAGTaGTGCTGGTCACCTTCCACTGCATCGTACTCTATGTCTCTGGCT +
Preference number: 6 (lower is better)
Translates to: LYCSPVVFRMEAKWQ*CWSPSTASYSMSLA
Trigger: AGCCAGAGACATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAGACCACAGGGCTGCAGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp AGCAAGACTCCACCGGGACAGTCCAGCCTCCTTCTGTaGGTGAGATACAACGTCAGACTGACAATCCACCAC +
Preference number: 6 (lower is better)
Translates to: SKTPPGQSSLLL*VRYNVRLTIHH
Trigger: GTGGTGGATTGTCAGTCTGACGTTGTATCTCACGCACAGAAGGAGGCTGGACTGTCCCGGTGGAGTCTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp GGAGGCGAAGTGGCAGTTGTGCTGGTCACCTTCCACTaGATCGTACTCTATGTCTCTGGCTCTGCAACAGTC +
Preference number: 6 (lower is better)
Translates to: GGEVAVVLVTFH*IVLYVSGSATV
Trigger: GACTGTTGCAGAGCCAGAGACATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp GGAGGCTCCCGGCTGTGGCTGATATTGTCTTGTTGCTaGTGGAGAAGGGTGAAGCCTGCTGCGATATCACTA +
Preference number: 6 (lower is better)
Translates to: GGSRLWLILSCC*WRRVKPAAISL
Trigger: TAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATCAGCCACAGCCGGGAGCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp AGCCCTGTGGTCTTCAGGATGGAGGCGAAGTGGCAGTaGTGCTGGTCACCTTCCACTGCATCGTACTCTATG +
Preference number: 6 (lower is better)
Translates to: SPVVFRMEAKWQ*CWSPSTASYSM
Trigger: CATAGAGTACGATGCAGTGGAAGGTGACCAGCACAACTGCCACTTCGCCTCCATCCTGAAGACCACAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp CCTGTAGATGTAGAGCGGCCACCCATAGGCAGCTGCTaGAAACGGCATGTAATGATGGCAGTTCTCCACTTC +
Preference number: 6 (lower is better)
Translates to: PVDVERPPIGSC*KRHVMMAVLHF
Trigger: GAAGTGGAGAACTGCCATCATTACATGCCGTTTGCAGCAGCTGCCTATGGGTGGCCGCTCTACATCTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp GGGCTTCCTCCGAACAGTCCGTACCAACAGCCATGCAGCAAGATCTaGTACTTCGGCTTATTGCAGTTAGCGATCACTCTCAGGATCCTC +
Preference number: 6 (lower is better)
Translates to: GLPPNSPYQQPCSKI*YFGLLQLAITLRIL
Trigger: GAGGATCCTGAGAGTGATCGCTAACTGCAATAAGCCGAAGTACAAGATCTTGCTGCATGGCTGTTGGTACGGACTGTTCGGAGGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp AGTCCGTACCAACAGCCATGCAGCAAGATCTTGTACTTCGGCTTATaGCAGTTAGCGATCACTCTCAGGATCCTCCTCTTGAGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SPYQQPCSKILYFGL*QLAITLRILLLRSS
Trigger: GGAGGACCTCAAGAGGAGGATCCTGAGAGTGATCGCTAACTGCAATAAGCCGAAGTACAAGATCTTGCTGCATGGCTGTTGGTACGGACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp ATTGTCTTGTTGCTGGTGGAGAAGGGTGAAGCCTGCTaGGATATCACTAGGCACCAGGTCTGTGTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: IVLLLVEKGEAC*DITRHQVCVRE
Trigger: TTCTCTGACACAGACCTGGTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp GATATTGTCTTGTTGCTGGTGGAGAAGGGTGAAGCCTaGTGCGATATCACTAGGCACCAGGTCTGTGTCAGA +
Preference number: 6 (lower is better)
Translates to: DIVLLLVEKGEA*CDITRHQVCVR
Trigger: TCTGACACAGACCTGGTGCCTAGTGATATCGCAGCAGGCTTCACCCTTCTCCACCAGCAACAAGACAATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp ACTCTGTCCAGGGCCCGAATCATGACGTCAGGCATGTaGTCAATCAGCATCTTTGGGCCTATCAGGATCTTA +
Preference number: 6 (lower is better)
Translates to: TLSRARIMTSGM*SISIFGPIRIL
Trigger: TAAGATCCTGATAGGCCCAAAGATGCTGATTGACCACATGCCTGACGTCATGATTCGGGCCCTGGACAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp ATCACTCTCAGGATCCTCCTCTTGAGGTCCTCCATGTaGGTCACACTTAACCTGGGGATCACATCCATCCCT +
Preference number: 6 (lower is better)
Translates to: ITLRILLLRSSM*VTLNLGITSIP
Trigger: AGGGATGGATGTGATCCCCAGGTTAAGTGTGACCAACATGGAGGACCTCAAGAGGAGGATCCTGAGAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 90 bp TACTTCGGCTTATTGCAGTTAGCGATCACTCTCAGGATCCTCCTCTaGAGGTCCTCCATGTTGGTCACACTTAACCTGGGGATCACATCC +
Preference number: 6 (lower is better)
Translates to: YFGLLQLAITLRILL*RSSMLVTLNLGITS
Trigger: GGATGTGATCCCCAGGTTAAGTGTGACCAACATGGAGGACCTCAAGAGGAGGATCCTGAGAGTGATCGCTAACTGCAATAAGCCGAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS TCA 72 bp CCACAACAGACTCCTTCCTGTGGTCCAGAACCACTATaGAGGGCAGCTCATACACCTTGTCGTGAAAGCTTA +
Preference number: 6 (lower is better)
Translates to: PQQTPSCGPEPL*RAAHTPCRESL
Trigger: TAAGCTTTCACGACAAGGTGTATGAGCTGCCCTTCATAGTGGTTCTGGACCACAGGAAGGAGTCTGTTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS TCA 72 bp GGTCAATCAGCATCTTTGGGCCTATCAGGATCTTACTaGATTCTGCTTCGTGTGCCCACCTCGCTCTGTACT +
Preference number: 6 (lower is better)
Translates to: GQSASLGLSGSY*ILLRVPTSLCT
Trigger: AGTACAGAGCGAGGTGGGCACACGAAGCAGAATTCAGTAAGATCCTGATAGGCCCAAAGATGCTGATTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp GACACACACGATGGCCAACACGGTGCATATAATAACTaGCAGGAGAACAAGGAGGACTATCAGGTACGTGCT +
Preference number: 6 (lower is better)
Translates to: DTHDGQHGAYNN*QENKEDYQVRA
Trigger: AGCACGTACCTGATAGTCCTCCTTGTTCTCCTGGCAGTTATTATATGCACCGTGTTGGCCATCGTGTGTGTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS GCA 72 bp TCAGGGCTTCCTCCGAACAGTCCGTACCAACAGCCATaGAGCAAGATCTTGTACTTCGGCTTATTGCAGTTA +
Preference number: 6 (lower is better)
Translates to: SGLPPNSPYQQP*SKILYFGLLQL
Trigger: TAACTGCAATAAGCCGAAGTACAAGATCTTGCTGCATGGCTGTTGGTACGGACTGTTCGGAGGAAGCCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp TTATTGCAGTTAGCGATCACTCTCAGGATCCTCCTCTaGAGGTCCTCCATGTTGGTCACACTTAACCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLQLAITLRILL*RSSMLVTLNLG
Trigger: CCCCAGGTTAAGTGTGACCAACATGGAGGACCTCAAGAGGAGGATCCTGAGAGTGATCGCTAACTGCAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CAA 72 bp CCGAACAGTCCGTACCAACAGCCATGCAGCAAGATCTaGTACTTCGGCTTATTGCAGTTAGCGATCACTCTC +
Preference number: 6 (lower is better)
Translates to: PNSPYQQPCSKI*YFGLLQLAITL
Trigger: GAGAGTGATCGCTAACTGCAATAAGCCGAAGTACAAGATCTTGCTGCATGGCTGTTGGTACGGACTGTTCGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS TCA 72 bp GCAGCTCATACACCTTGTCGTGAAAGCTTATGTGAATaGAATCCCTGTACTGCAGCCCTGTGGTCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: AAHTPCRESLCE*NPCTAALWSSG
Trigger: TCCTGAAGACCACAGGGCTGCAGTACAGGGATTTCATTCACATAAGCTTTCACGACAAGGTGTATGAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12
CDS CCA 72 bp AATCATGACGTCAGGCATGTGGTCAATCAGCATCTTTaGGCCTATCAGGATCTTACTGAATTCTGCTTCGTG +
Preference number: 6 (lower is better)
Translates to: NHDVRHVVNQHL*AYQDLTEFCFV
Trigger: CACGAAGCAGAATTCAGTAAGATCCTGATAGGCCCAAAGATGCTGATTGACCACATGCCTGACGTCATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045593.12