Pregenerated sensors for DAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022174Ensembl transcript IDs: ENSMUST00000022781.8, ENSMUST00000128231.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTGCGATCTGGGACTGGGCGATTCTGCACACACCATGCATCCCTaGTTCTCGTGTGAGGTTTCTGAGGCTCTCAGTACCAACACACAG | + |
|
Preference number: 1 (lower is better) Translates to: HCDLGLGDSAHTMHP*FSCEVSEALSTNTQ Trigger: CTGTGTGTTGGTACTGAGAGCCTCAGAAACCTCACACGAGAACCAGGGATGCATGGTGTGTGCAGAATCGCCCAGTCCCAGATCGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 90 bp | ACGTGCCACCTCACAACCAGTGAGACTCGTAGTCAAGCACGAATCTaGAGAAGCCATGTGCAACAAGCTGCCAGCTCAAGAATGCTGATC | + |
|
Preference number: 1 (lower is better) Translates to: TCHLTTSETRSQARI*RSHVQQAASSRMLI Trigger: GATCAGCATTCTTGAGCTGGCAGCTTGTTGCACATGGCTTCTTCAGATTCGTGCTTGACTACGAGTCTCACTGGTTGTGAGGTGGCACGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR TCA 90 bp | GGAAGGATTAGGAGGTGTGTCCTTGTTGGAGGAGGTATGTCACTGTaGGTAGGCTTTCAGGTTCAAAAGCCCATGCCACTCTCAGTTAGC | + |
|
Preference number: 1 (lower is better) Translates to: GRIRRCVLVGGGMSL*VGFQVQKPMPLSVS Trigger: GCTAACTGAGAGTGGCATGGGCTTTTGAACCTGAAAGCCTACTCACAGTGACATACCTCCTCCAACAAGGACACACCTCCTAATCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 90 bp | CAGGTTCCTATGTTTGAATGCTTCCACCCAGTAGGTGGAACTGTTTaGGAAGGATTAGGAGGTGTGTCCTTGTTGGAGGAGGTATGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: QVPMFECFHPVGGTV*EGLGGVSLLEEVCH Trigger: GTGACATACCTCCTCCAACAAGGACACACCTCCTAATCCTTCCCAAACAGTTCCACCTACTGGGTGGAAGCATTCAAACATAGGAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR GCA 90 bp | TTATTGTGCAAAGGAAAGGAAAAGCACAGGCATTCGTCCCTGAGTTaGATGAGCATAGGGCCAAACATCAAGCGGCAGAGGATACTCTAC | + |
|
Preference number: 1 (lower is better) Translates to: LLCKGKEKHRHSSLS*MSIGPNIKRQRILY Trigger: GTAGAGTATCCTCTGCCGCTTGATGTTTGGCCCTATGCTCATGCAACTCAGGGACGAATGCCTGTGCTTTTCCTTTCCTTTGCACAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 90 bp | AGCGACCTTGTCCTACATGAGAGTCTGTTTCAAAGCAAAAACAAATaGAAGATTTCTCCTTGTGCTCTCTGGGTCTCTCAGTGCCCAGTC | + |
|
Preference number: 1 (lower is better) Translates to: SDLVLHESLFQSKNK*KISPCALWVSQCPV Trigger: GACTGGGCACTGAGAGACCCAGAGAGCACAAGGAGAAATCTTTCATTTGTTTTTGCTTTGAAACAGACTCTCATGTAGGACAAGGTCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 90 bp | AGGGTTGGAGGGTCAAGAACACAAGGCCATCCTTCAGTACATAACTaGTTTGAAGCGACCTTGTCCTACATGAGAGTCTGTTTCAAAGCA | + |
|
Preference number: 1 (lower is better) Translates to: RVGGSRTQGHPSVHN*FEATLSYMRVCFKA Trigger: TGCTTTGAAACAGACTCTCATGTAGGACAAGGTCGCTTCAAATCAGTTATGTACTGAAGGATGGCCTTGTGTTCTTGACCCTCCAACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR GCA 90 bp | ACATTTTCTCCCAAAAGGTTATTATTTCCTAAGATTCTCTTCTCTTaGCACCTGGAAGCAATAGTACGAAATCTTATTGTGCAAAGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: TFSPKRLLFPKILFS*HLEAIVRNLIVQRK Trigger: TTTCCTTTGCACAATAAGATTTCGTACTATTGCTTCCAGGTGGCAAGAGAAGAGAATCTTAGGAAATAATAACCTTTTGGGAGAAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCTTGTGCTCTCTGGGTCTCTCAGTGCCCAGTCTGCAAATGGGAATGGCAAACACCAAGCCTGCCTaGTGCCATGCTCCCCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: FSLCSLGLSVPSLQMGMANTKPA*CHAPHP Trigger: AGGGTGGGGAGCATGGCAGCAGGCAGGCTTGGTGTT...TGCCATTCCCATTTGCAGACTGGGCACTGAGAGACCCAGAGAGCACAAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCACGAATCTGAAGAAGCCATGTGCAACAAGCTGCCAGCTCAAGAATGCTGATGGGGACGTCAAAGAGTaGGCGCTCCGCCAACCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: STNLKKPCATSCQLKNADGDVKE*ALRQPP Trigger: TGGAGGTTGGCGGAGCGCTCACTCTTTGACGTCCCC...ATCAGCATTCTTGAGCTGGCAGCTTGTTGCACATGGCTTCTTCAGATTCGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCCTTGTGCTCTCTGGGTCTCTCAGTGCCCAGTCTGCAAATGGGAATGGCACCCCCTAAGTCACACTaGCTTTTACAGCGCAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: FSLCSLGLSVPSLQMGMAPPKSH*LLQRNA Trigger: GGCATTGCGCTGTAAAAGTCAGTGTGACTTAGGGGG...TGCCATTCCCATTTGCAGACTGGGCACTGAGAGACCCAGAGAGCACAAGGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCCTTGTGCTCTCTGGGTCTCTCAGTGCCCAGTCTGCAAATGGGAATGGCACGGGTCAAAGGTCTCTaGAAAATGTGCAGGGCGATC | + |
|
Preference number: 2 (lower is better) Translates to: FSLCSLGLSVPSLQMGMARVKGL*KMCRAI Trigger: GATCGCCCTGCACATTTTCCAGAGACCTTTGACCCG...TGCCATTCCCATTTGCAGACTGGGCACTGAGAGACCCAGAGAGCACAAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTTTCAAAAGACCCAAGTTTGGTACCCAACACGACAATGAGCAGTTCCTAACTGAAACTGCTGCCCGCTaGAGCTGGGCAAGCCTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SFKRPKFGTQHDNEQFLTETAAR*SWASLQ Trigger: TTGCAGGCTTGCCCAGCTTCAGCGGGCAGCAGTTTC...AGTTAGGAACTGCTCATTGTCGTGTTGGGTACCAAACTTGGGTCTTTTGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTAGCTTTGTTTCAAGCTTGTGGCTCAAGATGTAAGCTGCCAGCTACTGCCTCCACAAGCTGCCTCTaGCATGGTGTCTTGTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: QLALFQACGSRCKLPATASTSCL*HGVLSQ Trigger: CTGTGACAAGACACCATGGCAGAGGCAGCTTGTGGA...GGCAGTAGCTGGCAGCTTACATCTTGAGCCACAAGCTTGAAACAAAGCTAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 90 bp | CCTGCTGCCATGCTCCCCACCCTGACAGCCATAGACTCTAACTCTTaGCAGCAATCAATACCAAATTACACACTTTCTTCCACAAGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PAAMLPTLTAIDSNS*QQSIPNYTLSSTSC Trigger: GCAGCTTGTGGAAGAAAGTGTGTAATTTGGTATTGATTGCTGCAAAGAGTTAGAGTCTATGGCTGTCAGGGTGGGGAGCATGGCAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACCCATCACTTCTGGTCGCCATGGGAACCTGCACTAACATACATAAACCCAGGTTCAAAAGCCCATaGCACTCTCAGTTAGCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: GDPSLLVAMGTCTNIHKPRFKSP*HSQLAL Trigger: CAAAGCTAACTGAGAGTGGCATGGGCTTTTGAACCT...GGGTTTATGTATGTTAGTGCAGGTTCCCATGGCGACCAGAAGTGATGGGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 90 bp | CTTATTGTGCAAAGGAAAGGAAAAGCACAGGCATTCGTCCCTGAGTaGCATGAGCATAGGGCCAAACATCAAGCGGCAGAGGATACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: LIVQRKGKAQAFVPE*HEHRAKHQAAEDTL Trigger: TAGAGTATCCTCTGCCGCTTGATGTTTGGCCCTATGCTCATGCAACTCAGGGACGAATGCCTGTGCTTTTCCTTTCCTTTGCACAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 90 bp | AGGATACTCTACATCGTGCGCCTGTGCATCTGGGAAGCAACTGCATaGTTCCCGGCTCATTTTCTCTCATCAAGGAAAAATATGTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RILYIVRLCIWEATA*FPAHFLSSRKNMCW Trigger: CCAACACATATTTTTCCTTGATGAGAGAAAATGAGCCGGGAACAATGCAGTTGCTTCCCAGATGCACAGGCGCACGATGTAGAGTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAGCAAGTTCTAGGACAGCCAGAACTACACAGAGAAACCCTGTCTAGAAAAAGGGCACACAACCTATaGAGGGAGGGCAGAGAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: IKQVLGQPELHRETLSRKRAHNL*REGREN Trigger: ATTCTCTCTGCCCTCCCTTCATAGGTTGTGTGCCCT...TTTTCTAGACAGGGTTTCTCTGTGTAGTTCTGGCTGTCCTAGAACTTGCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCCCATGTGCAACAAGCTaGCAGCTCAAGAATGCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LEAEMFLIWKVRATVRGGPCATS*QLKNAD Trigger: ATCAGCATTCTTGAGCTGGCAGCTTGTTGCACATGG...GCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGATCTGAAGAAGCCATGTaGAACAAGCTGCCAGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: HLEAEMFLIWKVRATVRGSEEAM*NKLPAQ Trigger: TTGAGCTGGCAGCTTGTTGCACATGGCTTCTTCAGA...TCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCTCCCAAAAGGTTATTATTTCCTAAGATTCTCTTCTCTTGCCACCTGGGAGGTGTGTCCTTGTTaGAGGAGGTATGTCACTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HFLPKGYYFLRFSSLATWEVCPC*RRYVTV Trigger: CACAGTGACATACCTCCTCCAACAAGGACACACCTC...CCAGGTGGCAAGAGAAGAGAATCTTAGGAAATAATAACCTTTTGGGAGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCAGATTCTGTAGTCAAGCACGAATCTaGAGAAGCCATGTGCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: EMFLIWKVRATVRGGRFCSQARI*RSHVQQ Trigger: TTGTTGCACATGGCTTCTTCAGATTCGTGCTTGACT...ACAGAATCTGCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCTCCCAAAAGGTTATTATTTCCTAAGATTCTCTTCTCTTGCCACCTGGGTAGGTGGAACTGTTTaGGAAGGATTAGGAGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HFLPKGYYFLRFSSLATWVGGTV*EGLGGV Trigger: CACACCTCCTAATCCTTCCCAAACAGTTCCACCTAC...CCAGGTGGCAAGAGAAGAGAATCTTAGGAAATAATAACCTTTTGGGAGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTTTCTCCCAAAAGGTTATTATTTCCTAAGATTCTCTTCTCTTGCCACCTGGGTGCTTAACAAGGGATaGAGCAAACAAACCGAATGT | + |
|
Preference number: 2 (lower is better) Translates to: HFLPKGYYFLRFSSLATWVLNKG*SKQTEC Trigger: ACATTCGGTTTGTTTGCTTCATCCCTTGTTAAGCAC...CCAGGTGGCAAGAGAAGAGAATCTTAGGAAATAATAACCTTTTGGGAGAAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTCAAAAGACCCAAGTTTGGTACCCAACACGACAATGAGCAGTTCCTAACTTATAAGCGCACTGAGTaGTCTTGTTTTTGTTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SFKRPKFGTQHDNEQFLTYKRTE*SCFCFP Trigger: AGGAAAACAAAAACAAGACCACTCAGTGCGCTTATA...AGTTAGGAACTGCTCATTGTCGTGTTGGGTACCAAACTTGGGTCTTTTGAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR GCA 72 bp | TCTCCTTGTGCTCTCTGGGTCTCTCAGTGCCCAGTCTaGAAATGGGAATGGCAGGCTCGCCTGCTTGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SPCALWVSQCPV*KWEWQARLLEA Trigger: GGCCTCAAGCAGGCGAGCCTGCCATTCCCATTTGCAGACTGGGCACTGAGAGACCCAGAGAGCACAAGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | GAAGCTGGGCAAGCCTGCAAACACCCTACTGTACCATaGGAACTCGGCCGACCAGGACCAGAACCAGCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: EAGQACKHPTVP*ELGRPGPEPAH Trigger: ATGGGCTGGTTCTGGTCCTGGTCGGCCGAGTTCCCATGGTACAGTAGGGTGTTTGCAGGCTTGCCCAGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | CTGGGACTGGGCGATTCTGCACACACCATGCATCCCTaGTTCTCGTGTGAGGTTTCTGAGGCTCTCAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: LGLGDSAHTMHP*FSCEVSEALST Trigger: GGTACTGAGAGCCTCAGAAACCTCACACGAGAACCAGGGATGCATGGTGTGTGCAGAATCGCCCAGTCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 72 bp | CTTTCCCCAGTCCCATGGCCCATATCGCCAGGTATGTaGACTCCCCAAATGCAACCCAATGGTGCGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LSPVPWPISPGM*TPQMQPNGAPS Trigger: AGATGGCGCACCATTGGGTTGCATTTGGGGAGTTCACATACCTGGCGATATGGGCCATGGGACTGGGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACCCATCACTTCTGGTCGCCATGGGAACCTGCACTAACATACATAAACCCTGCAGTGAGCGCCACTaGAAGCAACTGCCCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: GDPSLLVAMGTCTNIHKPCSERH*KQLPFT Trigger: AGTGAAGGGCAGTTGCTTCAAGTGGCGCTCACTGCA...GGGTTTATGTATGTTAGTGCAGGTTCCCATGGCGACCAGAAGTGATGGGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | GGACCTATACTTGCAATCCCAGCACGTGGCAAGGGTTaGAGGGTCAAGAACACAAGGCCATCCTTCAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: GPILAIPARGKG*RVKNTRPSFST Trigger: TGTACTGAAGGATGGCCTTGTGTTCTTGACCCTCCAACCCTTGCCACGTGCTGGGATTGCAAGTATAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACCCATCACTTCTGGTCGCCATGGGAACCTGCACTAACATACATAAACCCTTAGGAGGTGTGTCCTaGTTGGAGGAGGTATGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: GDPSLLVAMGTCTNIHKPLGGVS*LEEVCH Trigger: GTGACATACCTCCTCCAACAAGGACACACCTCCTAA...GGGTTTATGTATGTTAGTGCAGGTTCCCATGGCGACCAGAAGTGATGGGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 72 bp | CAAGACGGGAGAGTGGAGAGGAGGGCACACAACCTATaGAGGGAGGGCAGAGAGAATTTTCAGCTCTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: QDGRVERRAHNL*REGRENFQLYK Trigger: TTTGTAGAGCTGAAAATTCTCTCTGCCCTCCCTTCATAGGTTGTGTGCCCTCCTCTCCACTCTCCCGTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 72 bp | AGGAGGTGTGTCCTTGTTGGAGGAGGTATGTCACTGTaGGTAGGCTTTCAGGTTCAAAAGCCCATGCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RRCVLVGGGMSL*VGFQVQKPMPL Trigger: GAGTGGCATGGGCTTTTGAACCTGAAAGCCTACTCACAGTGACATACCTCCTCCAACAAGGACACACCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR GCA 72 bp | AAAGGAAAGGAAAAGCACAGGCATTCGTCCCTGAGTTaGATGAGCATAGGGCCAAACATCAAGCGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: KGKEKHRHSSLS*MSIGPNIKRQR Trigger: CCTCTGCCGCTTGATGTTTGGCCCTATGCTCATGCAACTCAGGGACGAATGCCTGTGCTTTTCCTTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | CCAGACACAGGAGGATCTCTGAGTCGGAGGCTAGGCTaGTATAAAGCAAGTTCTAGGACAGCCAGAACTACA | + |
|
Preference number: 3 (lower is better) Translates to: PDTGGSLSRRLG*YKASSRTARTT Trigger: TGTAGTTCTGGCTGTCCTAGAACTTGCTTTATACCAGCCTAGCCTCCGACTCAGAGATCCTCCTGTGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 72 bp | CTCACAACCAGTGAGACTCGTAGTCAAGCACGAATCTaGAGAAGCCATGTGCAACAAGCTGCCAGCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTTSETRSQARI*RSHVQQAASSR Trigger: TCTTGAGCTGGCAGCTTGTTGCACATGGCTTCTTCAGATTCGTGCTTGACTACGAGTCTCACTGGTTGTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR GCA 72 bp | TCAAGCACGAATCTGAAGAAGCCATGTGCAACAAGCTaGCAGCTCAAGAATGCTGATCCAGGGGACGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSTNLKKPCATS*QLKNADPGDVK Trigger: TTTGACGTCCCCTGGATCAGCATTCTTGAGCTGGCAGCTTGTTGCACATGGCTTCTTCAGATTCGTGCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| 3UTR GCA 72 bp | AGTGCCCAGTCTGCAAATGGGAATGGCAGGCTCGCCTaGTTGAGGCCATTTGAAAGTCAAATGATACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SAQSANGNGRLA*LRPFESQMILT Trigger: TGTGAGTATCATTTGACTTTCAAATGGCCTCAAGCAGGCGAGCCTGCCATTCCCATTTGCAGACTGGGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | AGCAAAACTTGCAGTTTATCTTTCTTCAAAAGCCTTTaGGAGCACACCTGTAACCCACAGGCTGACGAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: SKTCSLSFFKSL*EHTCNPQADER Trigger: GCGCTCGTCAGCCTGTGGGTTACAGGTGTGCTCCCAAAGGCTTTTGAAGAAAGATAAACTGCAAGTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | ATGTTTGAATGCTTCCACCCAGTAGGTGGAACTGTTTaGGAAGGATTAGGAGGTGTGTCCTTGTTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MFECFHPVGGTV*EGLGGVSLLEE Trigger: CTCCTCCAACAAGGACACACCTCCTAATCCTTCCCAAACAGTTCCACCTACTGGGTGGAAGCATTCAAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR GCA 72 bp | CCAGGAGACCCATCACTTCTGGTCGCCATGGGAACCTaGACTAACATACATAAACCCACAAGACATATACAT | + |
|
Preference number: 3 (lower is better) Translates to: PGDPSLLVAMGT*TNIHKPTRHIH Trigger: ATGTATATGTCTTGTGGGTTTATGTATGTTAGTGCAGGTTCCCATGGCGACCAGAAGTGATGGGTCTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTCTTGCCACCTGGAAGCAATAGTACGAAATCTTATTGTGCAAAGGAAAGGAGGTGTGTCCTTGTaGGAGGAGGTATGTCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: LFSCHLEAIVRNLIVQRKGGVSL*EEVCHC Trigger: ACAGTGACATACCTCCTCCAACAAGGACACACCTCC...TTTCCTTTGCACAATAAGATTTCGTACTATTGCTTCCAGGTGGCAAGAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR TCA 72 bp | AAATTAGAAAAAGGATCTAAAATTGGGCCCAGGAACTaGGGACCTATACTTGCAATCCCAGCACGTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: KLEKGSKIGPRN*GPILAIPARGK Trigger: CTTGCCACGTGCTGGGATTGCAAGTATAGGTCCTCAGTTCCTGGGCCCAATTTTAGATCCTTTTTCTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGGAGAGATGACTCAGCAGTTAAGATTATAAACTGGTCTTTCAAAAGACCCAGTAGGTGGAACTGTTaGGGAAGGATTAGGAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SWRDDSAVKIINWSFKRPSRWNC*GRIRRC Trigger: ACACCTCCTAATCCTTCCCAAACAGTTCCACCTACT...GGGTCTTTTGAAAGACCAGTTTATAATCTTAACTGCTGAGTCATCTCTCCAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTCAAAAGACCCAAGTTTGGTACCCAACACGACAATGAGCAGTTCCTAACTATCCAACTTTACCATTaGAGTTCAGGGCACACATTC | + |
|
Preference number: 3 (lower is better) Translates to: SFKRPKFGTQHDNEQFLTIQLYH*SSGHTF Trigger: GAATGTGTGCCCTGAACTCAAATGGTAAAGTTGGAT...AGTTAGGAACTGCTCATTGTCGTGTTGGGTACCAAACTTGGGTCTTTTGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CCA 72 bp | AGCTGGAGAGATGACTCAGCAGTTAAGATTATAAACTaGTCTTTCAAAAGACCCAAGTTTGGTACCCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SWRDDSAVKIIN*SFKRPKFGTQH Trigger: GTGTTGGGTACCAAACTTGGGTCTTTTGAAAGACCAGTTTATAATCTTAACTGCTGAGTCATCTCTCCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGAAAGAGAATTGCCTAGTAATAAACAGTACTGTCAGCTCAAAGGTAGCAAAAAGGATCTAAAATaGGGCCCAGGAACTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: KKERELPSNKQYCQLKGSKKDLK*GPGTED Trigger: GTCCTCAGTTCCTGGGCCCAATTTTAGATCCTTTTT...GCTACCTTTGAGCTGACAGTACTGTTTATTACTAGGCAATTCTCTTTCTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR GCA 72 bp | CCCAAAAGGTTATTATTTCCTAAGATTCTCTTCTCTTaGCACCTGGAAGCAATAGTACGAAATCTTATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PKRLLFPKILFS*HLEAIVRNLIV Trigger: CACAATAAGATTTCGTACTATTGCTTCCAGGTGGCAAGAGAAGAGAATCTTAGGAAATAATAACCTTTTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR TCA 90 bp | TCAGCACAGCAGCACAAGGCTGGGATGGCCACTTACGCTCCGCCAACCTCCAACCAGAGAGGAAAGAGTTaGAGGGGAAGGTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SAQQHKAGMATYAPPTSNQRGKS*RGRCPR Trigger: TCGTGGGCACCTTCCCCTTCAACTCTTTCCTCTCTG...GTTGGAGGTTGGCGGAGCGTAAGTGGCCATCCCAGCCTTGTGCTGCTGTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 72 bp | AGGACCTATACTTGCAATCCCAGCACGTGGCAAGGGTaGGAGGGTCAAGAACACAAGGCCATCCTTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RTYTCNPSTWQG*EGQEHKAILQY Trigger: GTACTGAAGGATGGCCTTGTGTTCTTGACCCTCCAACCCTTGCCACGTGCTGGGATTGCAAGTATAGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 72 bp | CAAAGGAAAGGAAAAGCACAGGCATTCGTCCCTGAGTaGCATGAGCATAGGGCCAAACATCAAGCGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRKGKAQAFVPE*HEHRAKHQAAE Trigger: CTCTGCCGCTTGATGTTTGGCCCTATGCTCATGCAACTCAGGGACGAATGCCTGTGCTTTTCCTTTCCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 72 bp | GCCCAGTCTGCAAATGGGAATGGCAGGCTCGCCTGCTaGAGGCCATTTGAAAGTCAAATGATACTCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQSANGNGRLAC*RPFESQMILTS Trigger: GCTTGTGAGTATCATTTGACTTTCAAATGGCCTCAAGCAGGCGAGCCTGCCATTCCCATTTGCAGACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCCAGAGAGGAAAGAGTTaGAGGGGAAGGTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LEAEMFLIWKVRATVRGGQRGKS*RGRCPR Trigger: TCGTGGGCACCTTCCCCTTCAACTCTTTCCTCTCTG...GCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCGGCAAACCGCTAGGATaGAGCTGCCCACACAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEAEMFLIWKVRATVRGGGKPLG*SCPHKR Trigger: TCTCTTGTGTGGGCAGCTTCATCCTAGCGGTTTGCC...GCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR CCA 90 bp | TGTCACAGCATTAATGAAGTAACTGAGACAAGACGGGAGAGTGGAGAGGAGGGCAAGTCCGCCTTGTTCTaGGGGTTGATCTGTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CHSINEVTETRRESGEEGKSALF*GLICIL Trigger: GAGAATACAGATCAACCCCCAGAACAAGGCGGACTT...GCCCTCCTCTCCACTCTCCCGTCTTGTCTCAGTTACTTCATTAATGCTGTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAAGCAACTTCAGCCGCTaGGGAGTGGAGCTCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HLEAEMFLIWKVRATVRGSNFSR*GVELKY Trigger: GTACTTGAGCTCCACTCCGCAGCGGCTGAAGTTGCT...TCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCTGCCCACACAAGAGATaGAGCCAGAGAGGAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEAEMFLIWKVRATVRGGCPHKR*SQRGKS Trigger: ACTCTTTCCTCTCTGGCTTCATCTCTTGTGTGGGCA...GCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR GCA 90 bp | ATAAAGCAAGTTCTAGGACAGCCAGAACTACACAGAGAAACCCTGTCTAGAAAAAGCAACTTCAGCCGCTaGGGAGTGGAGCTCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IKQVLGQPELHRETLSRKSNFSR*GVELKY Trigger: GTACTTGAGCTCCACTCCGCAGCGGCTGAAGTTGCT...TTTTCTAGACAGGGTTTCTCTGTGTAGTTCTGGCTGTCCTAGAACTTGCTTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR GCA 90 bp | CACTTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGACAAGGTGCAGGATCGTaGTGGCAAAGAGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLEAEMFLIWKVRATVRGQGAGS*WQRGSQ Trigger: CTGACTTCCTCTTTGCCAGCACGATCCTGCACCTTG...TCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCTTCATGACGACAAGGTaGAGGATCGTGCTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LEAEMFLIWKVRATVRGGFMTTR*RIVLAK Trigger: CTTTGCCAGCACGATCCTGCACCTTGTCGTCATGAA...GCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGTGCAGGATCGTGCTaGCAAAGAGGAAGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HLEAEMFLIWKVRATVRGGAGSC*QRGSQQ Trigger: TTGCTGACTTCCTCTTTGCCAGCACGATCCTGCACC...TCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCAGATTCTGTAGCCAACGAAGTTCATaGCGACAAGGTGCAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: EMFLIWKVRATVRGGRFCSQRSS*RQGAGS Trigger: CGATCCTGCACCTTGTCGTCATGAACTTCGTTGGCT...ACAGAATCTGCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAGAGATGACTCAGCAGTTAAGATTATAAACTGGTCTTTCAAAAGACCCAGCCAACGAAGTTCATaGCGACAAGGTGCAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SWRDDSAVKIINWSFKRPSQRSS*RQGAGS Trigger: CGATCCTGCACCTTGTCGTCATGAACTTCGTTGGCT...GGGTCTTTTGAAAGACCAGTTTATAATCTTAACTGCTGAGTCATCTCTCCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR CCA 90 bp | TTGGAGGCTGAAATGTTTTTAATATGGAAAGTAAGGGCTACAGTGAGGGGAGGCAAGTCCGCCTTGTTCTaGGGGTTGATCTGTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEAEMFLIWKVRATVRGGKSALF*GLICIL Trigger: GAGAATACAGATCAACCCCCAGAACAAGGCGGACTT...GCCTCCCCTCACTGTAGCCCTTACTTTCCATATTAAAAACATTTCAGCCTCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTCTTGCCACCTGGAAGCAATAGTACGAAATCTTATTGTGCAAAGGAAAGGTGCAGGATCGTGCTaGCAAAGAGGAAGTCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFSCHLEAIVRNLIVQRKGAGSC*QRGSQQ Trigger: TTGCTGACTTCCTCTTTGCCAGCACGATCCTGCACC...TTTCCTTTGCACAATAAGATTTCGTACTATTGCTTCCAGGTGGCAAGAGAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGAGAGATGACTCAGCAGTTAAGATTATAAACTGGTCTTTCAAAAGACCCTGCCCACACAAGAGATaGAGCCAGAGAGGAAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWRDDSAVKIINWSFKRPCPHKR*SQRGKS Trigger: ACTCTTTCCTCTCTGGCTTCATCTCTTGTGTGGGCA...GGGTCTTTTGAAAGACCAGTTTATAATCTTAACTGCTGAGTCATCTCTCCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 72 bp | ATGCTCCCCACCCTGACAGCCATAGACTCTAACTCTTaGCAGCAATCAATACCAAATTACACACTTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLPTLTAIDSNS*QQSIPNYTLSS Trigger: GGAAGAAAGTGTGTAATTTGGTATTGATTGCTGCAAAGAGTTAGAGTCTATGGCTGTCAGGGTGGGGAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGAAAAATATGTGTTGGGAAAAATCATGTCCGTTTCACTGCTTTAAGACTCCAAGGTGCAGGATCGTaGTGGCAAAGAGGAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGKICVGKNHVRFTALRLQGAGS*WQRGSQ Trigger: CTGACTTCCTCTTTGCCAGCACGATCCTGCACCTTG...GAGTCTTAAAGCAGTGAAACGGACATGATTTTTCCCAACACATATTTTTCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| 3UTR CAA 72 bp | CCTAAGTCTTCTCATAAGTTAATCCAACTTTACCATTaGAGTTCAGGGCACACATTCCTAAGAAGCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PKSSHKLIQLYH*SSGHTFLRSSC Trigger: ACAGCTGCTTCTTAGGAATGTGTGCCCTGAACTCAAATGGTAAAGTTGGATTAACTTATGAGAAGACTTAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS-3UTR CAA 90 bp | AGCACGAATCTGAAGAAGCCATGTGCAACAAGCTGCCAGCTCAAGAATGCTGATCCTTGGAAGTCCGCCTaGTTCTGGGGGTTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: STNLKKPCATSCQLKNADPWKSA*FWGLIC Trigger: ACAGATCAACCCCCAGAACAAGGCGGACTTCCAAGG...ATCAGCATTCTTGAGCTGGCAGCTTGTTGCACATGGCTTCTTCAGATTCGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022781.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGGAGAGATGACTCAGCAGTTAAGATTATAAACTGGTCTTTCAAAAGACCCCCTTGGAAGTCCGCCTaGTTCTGGGGGTTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWRDDSAVKIINWSFKRPPWKSA*FWGLIC Trigger: ACAGATCAACCCCCAGAACAAGGCGGACTTCCAAGG...GGGTCTTTTGAAAGACCAGTTTATAATCTTAACTGCTGAGTCATCTCTCCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000128231.2 |
||
| CDS CAA 72 bp | GAGGAAGTCAGCAAAGGCTCGCTCCGGAGAGATGCCTaGGAAGTCCGCCTTGTTCTGGGGGTTGATCTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: EEVSKGSLRRDA*EVRLVLGVDLY Trigger: ATACAGATCAACCCCCAGAACAAGGCGGACTTCCAAGGCATCTCTCCGGAGCGAGCCTTTGCTGACTTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022781.8 ENSMUST00000128231.2 |
||
| CDS CCA 72 bp | AGGAAGTCAGCAAAGGCTCGCTCCGGAGAGATGCCTTaGAAGTCCGCCTTGTTCTGGGGGTTGATCTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: RKSAKARSGEMP*KSALFWGLICI Trigger: AATACAGATCAACCCCCAGAACAAGGCGGACTTCCAAGGCATCTCTCCGGAGCGAGCCTTTGCTGACTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022781.8 ENSMUST00000128231.2 |
||