Pregenerated sensors for DACT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078794Ensembl transcript IDs: ENSMUST00000108493.3
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGGGGCGGCCTCTCCAGGACGGCTATGGACGGCGGGCAGTGAGTaGGGAGGGTCTTTGGAAGCAGAGAAAACTGGTGGTCTTTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RGAASPGRLWTAGSE*GGSLEAEKTGGLWK Trigger: CTTCCAAAGACCACCAGTTTTCTCTGCTTCCAAAGACCCTCCTCACTCACTGCCCGCCGTCCATAGCCGTCCTGGAGAGGCCGCCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR CCA 90 bp | AATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTaGCTGGGCTCACTGCCGCTCCACAGCAAACTGAAGGCGCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: NGREATFKFSLVPTT*LGSLPLHSKLKALH Trigger: ATGGAGCGCCTTCAGTTTGCTGTGGAGCGGCAGTGAGCCCAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR CCA 90 bp | AGACCCGAACAGAATTACTGCATTTGCGTACACCCATTGTACAGATaGGGAGAGTGTGGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: RPEQNYCICVHPLYR*GECGPRRGAFWFKA Trigger: AGCCTTGAACCAGAAGGCACCCCTCCGTGGGCCACACTCTCCCCATCTGTACAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR GCA 90 bp | GGCGCTCCATACATGCAGGTTGAAAGGGACGCAGCTCTCATTCAGTaGAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTA | + |
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Preference number: 1 (lower is better) Translates to: GAPYMQVERDAALIQ*RTRIQGYVTLCIYL Trigger: TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAGAGCTGCGTCCCTTTCAACCTGCATGTATGGAGCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGATGGACGGCGGGCAGTaGGTGAGGAGGGTCTTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGMDGGQ*VRRVFG Trigger: TCCAAAGACCCTCCTCACTCACTGCCCGCCGTCCAT...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | GGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGGGGTGTGGAGAGGGTTaGAGGATGAGAAGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: GPRRGAFWFKALKTSCRGGCGEG*RMRSVG Trigger: CCCCACACTTCTCATCCTCCAACCCTCTCCACACCC...CCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGTGGCCCACGGAGGGGTaGCTTCTGGTTCAAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGWPTEG*LLVQGF Trigger: AAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCCA...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGCGGAGGGGTGCCTTCTaGTTCAAGGCTTTGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGRRGAF*FKALKT Trigger: GGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCG...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACCACCCATTGTACAGATaGGGAGAGTGTGGCCCACGG | + |
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Preference number: 2 (lower is better) Translates to: PLRQCHFLFQGMALCRHNHPLYR*GECGPR Trigger: CCGTGGGCCACACTCTCCCCATCTGTACAATGGGTG...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR CAA 90 bp | AAGGAGGAGAGACCCGAACAGAATTACTGCATTTGCGTACACCCATaGTACAGATGGGGAGAGTGTGGCCCACGGAGGGGTGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KEERPEQNYCICVHP*YRWGECGPRRGAFW Trigger: CCAGAAGGCACCCCTCCGTGGGCCACACTCTCCCCATCTGTACAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGGTCTCTCCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTGGCTGGCCATGGAGGTGAAGTaGAGTTCAAGCCCATCCCGC | + |
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Preference number: 2 (lower is better) Translates to: KNGREATFKFSLVPTTWLAMEVK*SSSPSR Trigger: GCGGGATGGGCTTGAACTTCACTTCACCTCCATGGC...CAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGAAATTAAAACGGGGGTaGAGGAGGAGAGACCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGKLKRG*RRRDPN Trigger: GTTCGGGTCTCTCCTCCTTCACCCCCGTTTTAATTT...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACGTGGTCTTTGGAAGGTaGGTGTGGAGAGGGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: PLRQCHFLFQGMALCRHNVVFGR*VWRGLE Trigger: CTCCAACCCTCTCCACACCCACCTTCCAAAGACCAC...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAACCTCCCAATTCCCCATGACTGTCCAAGGATGGAGCAGAAAGAGTCCTACGGCGGGCAGTGAGTaGGGAGGGTCTTTGGAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLTSQFPMTVQGWSRKSPTAGSE*GGSLEA Trigger: TGCTTCCAAAGACCCTCCTCACTCACTGCCCGCCGT...AGGACTCTTTCTGCTCCATCCTTGGACAGTCATGGGGAATTGGGAGGTTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTGGCTGGGGGCACTTTGTGAATaGGAAGGGGACCCTATCTGG | + |
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Preference number: 2 (lower is better) Translates to: KNGREATFKFSLVPTTWLGALCE*EGDPIW Trigger: CCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCC...CAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | AAAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTGGCTGGGAGAGGCACGAGATTaGAACCATCTTCCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KNGREATFKFSLVPTTWLGEARD*NHLPSS Trigger: AGAGGAAGGAAGATGGTTTCAATCTCGTGCCTCTCC...CAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGACAATAAAACTGGTGGTCTTTaGAAGGTGGGTGTGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TEGCLLVQGFENQLSWDNKTGGL*KVGVER Trigger: CCTCTCCACACCCACCTTCCAAAGACCACCAGTTTT...ATTGTCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR GCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCCCGAACAGAATTACTaGATTTGCGTACACCCATTG | + |
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Preference number: 2 (lower is better) Translates to: SKPLRQCHFLFQGMALCRPEQNY*ICVHPL Trigger: CAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGG...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGCTATGTCAGAGAAGTGGAGAACAGACTAAGCTTCTAAAATTAAAACGGCGGAGGCCATGGAGGTaGAGTGAAGTTCAAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RRLCQRSGEQTKLLKLKRRRPWR*SEVQAH Trigger: ATGGGCTTGAACTTCACTTCACCTCCATGGCCTCCG...CCGTTTTAATTTTAGAAGCTTAGTCTGTTCTCCACTTCTCTGACATAGCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTAAAGGGTCCAGGGACATaGAGGGGGCACTTTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLKGPGT*RGHFVN Trigger: ATTCACAAAGTGCCCCCTCCATGTCCCTGGACCCTT...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTATCCTCTTCCAGGGCATaGCACTCTGTAGGCATAACC | + |
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Preference number: 2 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLSSSRA*HSVGIT Trigger: GGTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGA...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR TCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTATCTGGTTCAAGGCTTTaGAAACCAGCTGTCGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLSGSRL*KPAVVG Trigger: TCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGA...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR TCA 72 bp | GTGGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTTaGAAACCAGCTGTCGTGGGACAATCTGGGCGCCTC | + |
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Preference number: 3 (lower is better) Translates to: VAHGGVPSGSRL*KPAVVGQSGRL Trigger: GAGGCGCCCAGATTGTCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR TCA 72 bp | TCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACCTaGGTCAGACAGTCTCTGACTTGGGGGCCCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SSSRAWHSVGIT*VRQSLTWGPQG Trigger: CCCCTGGGGCCCCCAAGTCAGAGACTGTCTGACTCAGGTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR GCA 72 bp | AAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTaGCCACCACCTGGCTGGGCTCACTGCCGCTCCACA | + |
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Preference number: 3 (lower is better) Translates to: KMAVKRHSNSAW*PPPGWAHCRST Trigger: TGTGGAGCGGCAGTGAGCCCAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR CCA 72 bp | GAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTaGCTGGGCTCACTGCCGCTCCACAGCAAACTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EATFKFSLVPTT*LGSLPLHSKLK Trigger: CTTCAGTTTGCTGTGGAGCGGCAGTGAGCCCAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CAA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGTTCTGGTTCAAGGCTTaGAAAACCAGCTGTCGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGFWFKA*KTSCRG Trigger: CCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAA...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR GCA 72 bp | ACGGGGGTGAAGGAGGAGAGACCCGAACAGAATTACTaGATTTGCGTACACCCATTGTACAGATGGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: TGVKEERPEQNY*ICVHPLYRWGE Trigger: CTCTCCCCATCTGTACAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGGTCTCTCCTCCTTCACCCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CAA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACATTTGCGTACACCCATaGTACAGATGGGGAGAGTGT | + |
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Preference number: 3 (lower is better) Translates to: PLRQCHFLFQGMALCRHNICVHP*YRWGEC Trigger: ACACTCTCCCCATCTGTACAATGGGTGTACGCAAAT...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR GCA 72 bp | GTGAAGGAGGAGAGACCCGAACAGAATTACTGCATTTaGGTACACCCATTGTACAGATGGGGAGAGTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VKEERPEQNYCI*VHPLYRWGECG Trigger: GCCACACTCTCCCCATCTGTACAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGGTCTCTCCTCCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CAA 90 bp | AGAAGGCTATGTCAGAGAAGTGGAGAACAGACTAAGCTTCTAAAATTAAAACGGGAAAACTGGTGGTCTTaGGAAGGTGGGTGTGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: RRLCQRSGEQTKLLKLKRENWWS*EGGCGE Trigger: CTCTCCACACCCACCTTCCAAAGACCACCAGTTTTC...CCGTTTTAATTTTAGAAGCTTAGTCTGTTCTCCACTTCTCTGACATAGCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CAA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTAGTTGGCAACTCCTACTaGACCCTCAAAGCCCCTAAG | + |
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Preference number: 3 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLVGNSY*TLKAPK Trigger: CTTAGGGGCTTTGAGGGTCAAGTAGGAGTTGCCAAC...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR-3UTR CAA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTAGGGAGAGGCACGAGATaGAAACCATCTTCCTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLGRGTR*KPSSFL Trigger: GAGGAAGGAAGATGGTTTCAATCTCGTGCCTCTCCC...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | GGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGCACGAGGCGGCCCTCTaGCGGACTGGAGGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GPRRGAFWFKALKTSCRGHEAAL*RTGGRR Trigger: TCGCCGCCCTCCAGTCCGGCAGAGGGCCGCCTCGTG...CCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR TCA 90 bp | GGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGGGCCCAGGTCCCAGATaGGCCCAGGCAGGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GPRRGAFWFKALKTSCRGGPGPR*AQAGPP Trigger: TGGAGGCCCTGCCTGGGCTCATCTGGGACCTGGGCC...CCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR CCA 90 bp | GGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGGCGACTCGCCCTCGCTaGCGCTCGACTCGCTTTCGC | + |
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Preference number: 4 (lower is better) Translates to: GPRRGAFWFKALKTSCRGATRPR*RSTRFR Trigger: GCGAAAGCGAGTCGAGCGCCAGCGAGGGCGAGTCGC...CCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR CCA 90 bp | GGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGTCTTCACGAAGACCTTaGCGGGGCCCGCAGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GPRRGAFWFKALKTSCRGSSRRP*RGPQAS Trigger: GGACGCCTGCGGGCCCCGCCAAGGTCTTCGTGAAGA...CCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGAGAGCCCGGCCAGGCTaGCTTCCAACCATCCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGRARPG*LPTIPA Trigger: TGCGGGGATGGTTGGAAGGCAGCCTGGCCGGGCTCT...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACGCCAGCCGCAGCGCCTaGTGCACGCGGTACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLRQCHFLFQGMALCRHNASRSA*CTRYSC Trigger: GCAGGAGTACCGCGTGCAGCAGGCGCTGCGGCTGGC...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGCTCTCTCGGAGCCAATaGAACTCGCAGAGCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGLSRSQ*NSQSPA Trigger: GGCCGGGCTCTGCGAGTTGCATTGGCTCCGAGAGAG...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGAGCCGCAGCGCCTGCTaGACGCGGTACTCCTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SKPLRQCHFLFQGMALCRSRSAC*TRYSCL Trigger: GAGGCAGGAGTACCGCGTGCAGCAGGCGCTGCGGCT...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | AAAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTGGCTGGCGGCCGCCACCAGTTaGTGCGGCCACACGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KNGREATFKFSLVPTTWLAAATS*CGHTRP Trigger: AGGCCTCGTGTGGCCGCAGCAACTGGTGGCGGCCGC...CAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR CCA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACCCGACTCTGGGGCGCTaGGACTGGCGTCGCCTAAGG | + |
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Preference number: 4 (lower is better) Translates to: PLRQCHFLFQGMALCRHNPTLGR*DWRRLR Trigger: CCTTAGGCGACGCCAGTCCCAGCGCCCCAGAGTCGG...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACGCCCGGGATGTACTGTaGCTTCACGAGGCGGCCCTC | + |
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Preference number: 4 (lower is better) Translates to: PLRQCHFLFQGMALCRHNARDVL*LHEAAL Trigger: GAGGGCCGCCTCGTGAAGGCACAGTACATCCCGGGC...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR CCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCTGGGGCGCTGGGACTaGCGTCGCCTAAGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SKPLRQCHFLFQGMALCRLGRWD*RRLRTW Trigger: CCAAGTCCTTAGGCGACGCCAGTCCCAGCGCCCCAG...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| 3UTR CAA 72 bp | TGTGGCCCACGGAGGGGTGCCTTCTGGTTCAAGGCTTaGAAAACCAGCTGTCGTGGGACAATCTGGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: CGPRRGAFWFKA*KTSCRGTIWAP Trigger: AGGCGCCCAGATTGTCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGTGGGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS-3UTR GCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCTCAGGTCTCCCAGCTaGTGGCCCAGGTCCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SKPLRQCHFLFQGMALCRLRSPS*WPRSQM Trigger: CATCTGGGACCTGGGCCAGCAGCTGGGAGACCTGAG...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGGGACATGGAGGGGGCACTTTGTGAATGAGAAGGGGACCCTATCTGGGCATAGAAGCCTGAGCTaGGCCCACTCTCCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPGTWRGHFVNEKGTLSGHRSLS*AHSPGP Trigger: TGGACCAGGAGAGTGGGCGCAGCTCAGGCTTCTATG...CCCAGATAGGGTCCCCTTCTCATTCACAAAGTGCCCCCTCCATGTCCCTGGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGAGACTGGTCTCAGACTaGGAGCGCGCCGCTTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SKPLRQCHFLFQGMALCRRLVSD*ERAALR Trigger: GCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCT...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | ACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGACAATCGCGGCCCAGTAGACTaGTCTCAGACTGCGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEGCLLVQGFENQLSWDNRGPVD*SQTASA Trigger: CGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCG...ATTGTCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR TCA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACGTCTTCATAGAAGCCTaGGCTGCGCCCACTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLRQCHFLFQGMALCRHNVFIEA*AAPTLL Trigger: CAGGAGAGTGGGCGCAGCTCAGGCTTCTATGAAGAC...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGAGCACTCGGAGTCGCTaGCTGCGCAACCGTACAACA | + |
|
Preference number: 4 (lower is better) Translates to: SKPLRQCHFLFQGMALCRSTRSR*LRNRTT Trigger: TGTTGTACGGTTGCGCAGGCAGCGACTCCGAGTGCT...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTGGCTGTGTCCCCGCAGAAGGTaGAGGGTGGTGAATCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KNGREATFKFSLVPTTWLCPRRR*RVVNLG Trigger: GCCCAGATTCACCACCCTCCACCTTCTGCGGGGACA...CAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTAACCTCCCAATTCCCCATGACTGTCCAAGGATGGAGCAGAAAGAGTCCTAGGTCTCCCAGCTGCTaGCCCAGGTCCCAGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSQFPMTVQGWSRKSPRSPSC*PRSQMS Trigger: GCTCATCTGGGACCTGGGCCAGCAGCTGGGAGACCT...AGGACTCTTTCTGCTCCATCCTTGGACAGTCATGGGGAATTGGGAGGTTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTAACCTCCCAATTCCCCATGACTGTCCAAGGATGGAGCAGAAAGAGTCCTAGCCACCGCGTGCAGTaGGCTAGGTGTCAGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSQFPMTVQGWSRKSPSHRVQ*ARCQEG Trigger: CCCTTCCTGACACCTAGCCCACTGCACGCGGTGGCT...AGGACTCTTTCTGCTCCATCCTTGGACAGTCATGGGGAATTGGGAGGTTAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | TCAAAGCCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCTTCAGCGCGTGCGATaGCTTGATCTTCACGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKPLRQCHFLFQGMALCRLQRVR*LDLHED Trigger: GTCTTCGTGAAGATCAAGGCATCGCACGCGCTGAAG...CCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGGCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| 3UTR CAA 72 bp | AGACCCGAACAGAATTACTGCATTTGCGTACACCCATaGTACAGATGGGGAGAGTGTGGCCCACGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPEQNYCICVHP*YRWGECGPRRG Trigger: ACCCCTCCGTGGGCCACACTCTCCCCATCTGTACAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR TCA 90 bp | TCTCTAACCTCCCAATTCCCCATGACTGTCCAAGGATGGAGCAGAAAGAGTCCTGCGCGTGCGATGCCTTaGTCTTCACGAAGACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSQFPMTVQGWSRKSPARAMP*SSRRPW Trigger: CCAAGGTCTTCGTGAAGATCAAGGCATCGCACGCGC...AGGACTCTTTCTGCTCCATCCTTGGACAGTCATGGGGAATTGGGAGGTTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | AAAAATGGCCGTGAAGCGACATTCAAATTCAGCCTGGTGCCCACCACCTGGCTGCGTCGCCTAAGGACTTaGGTCTCTCACTGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KNGREATFKFSLVPTTWLRRLRT*VSHWHR Trigger: TCTATGCCAGTGAGAGACCCAAGTCCTTAGGCGACG...CAGCCAGGTGGTGGGCACCAGGCTGAATTTGAATGTCGCTTCACGGCCATTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCTATGTCAGAGAAGTGGAGAACAGACTAAGCTTCTAAAATTAAAACGGGCCGCCACCAGTTGCTaGGGCCACACGAGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRLCQRSGEQTKLLKLKRAATSC*GHTRPP Trigger: CGGAGGCCTCGTGTGGCCGCAGCAACTGGTGGCGGC...CCGTTTTAATTTTAGAAGCTTAGTCTGTTCTCCACTTCTCTGACATAGCCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTAGGCACCCACCGACTCTaGGGCGCTGGGACTGGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLGTHRL*GAGTGV Trigger: GACGCCAGTCCCAGCGCCCCAGAGTCGGTGGGTGCC...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| 3UTR CAA 72 bp | GGTGAAGGAGGAGAGACCCGAACAGAATTACTGCATTaGCGTACACCCATTGTACAGATGGGGAGAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGGETRTELLH*RTPIVQMGRVW Trigger: CCACACTCTCCCCATCTGTACAATGGGTGTACGCAAATGCAGTAATTCTGTTCGGGTCTCTCCTCCTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTACACTTGGCCTTGGGCTaGGCAGAGCCACCGCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLHLALG*AEPPRA Trigger: TGCACGCGGTGGCTCTGCGCAGCCCAAGGCCAAGTG...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCTATGTCAGAGAAGTGGAGAACAGACTAAGCTTCTAAAATTAAAACGGTCTCACTGGCATAGATaGCCCGGGGGTCCGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLCQRSGEQTKLLKLKRSHWHR*PGGPRD Trigger: GTCCCTCGGACCCCCGGGGCATCTATGCCAGTGAGA...CCGTTTTAATTTTAGAAGCTTAGTCTGTTCTCCACTTCTCTGACATAGCCTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR GCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTATGCACGCGGTACTCCTaGCTCTCTCGGAGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLCTRYS*LSRSQC Trigger: GCATTGGCTCCGAGAGAGGCAGGAGTACCGCGTGCA...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR TCA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTAGAAGGTGGAGGGTGGTaGATCTGGGCCTCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLEGGGW*IWASSR Trigger: TCTACTGGAGGCCCAGATTCACCACCCTCCACCTTC...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCTATGTCAGAGAAGTGGAGAACAGACTAAGCTTCTAAAATTAAAACGGACTTGGGTCTCTCACTaGCATAGATGCCCCGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRLCQRSGEQTKLLKLKRTWVSH*HRCPGG Trigger: ACCCCCGGGGCATCTATGCCAGTGAGAGACCCAAGT...CCGTTTTAATTTTAGAAGCTTAGTCTGTTCTCCACTTCTCTGACATAGCCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | GCCCGGGAGGCCCCTGGAGGCCGCGGGCGCGCCCGGGATGTACTGTaGCTTCACGAGGCGGCCCTCTGCCGGACTGGAGGGCGGCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: AREAPGGRGRARDVL*LHEAALCRTGGRRR Trigger: GCGTCGCCGCCCTCCAGTCCGGCAGAGGGCCGCCTCGTGAAGGCACAGTACATCCCGGGCGCGCCCGCGGCCTCCAGGGGCCTCCCGGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | CGCGGGCTCGGGGGCGGCGGCCATCCGGTGCGTCGATCTCAGCGGTaGAACGCCACCGACGGCAGGCCTGGACCGTCGGCGTGGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLGGGGHPVRRSQR*NATDGRPGPSAWAL Trigger: CAGCGCCCACGCCGACGGTCCAGGCCTGCCGTCGGTGGCGTTCCACCGCTGAGATCGACGCACCGGATGGCCGCCGCCCCCGAGCCCGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | GGTGGCGGAGCGGCGTGCGCGCGGCCCAGTAGACTGGTCTCAGACTaGGAGCGCGCCGCTTTGCGCGCCCTCGGCGATCCCCGACGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GGGAACARPSRLVSD*ERAALRALGDPRRP Trigger: GGGGCGTCGGGGATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCACGCCGCTCCGCCACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | GGCGCCTGCGCAGGAGCGCCGAGATGTAGCCGTCAAGGGGCCGGCTaGCCGCCCCGTCCGGCGAGCCGCACGGTACGCGTCCACTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GACAGAPRCSRQGAG*PPRPASRTVRVHLA Trigger: GGCCAAGTGGACGCGTACCGTGCGGCTCGCCGGACGGGGCGGCCAGCCGGCCCCTTGACGGCTACATCTCGGCGCTCCTGCGCAGGCGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | CTCTGCCAGGCGGCCCCGACGGCCCGCAGCGCGCGGCCGTTCCCTTaGCGGGGACTGCTCCACACTGCGACCTCGCGTAAGCGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCQAAPTARSARPFP*RGLLHTATSRKRRS Trigger: GCTCCGCCGCTTACGCGAGGTCGCAGTGTGGAGCAGTCCCCGCCAAGGGAACGGCCGCGCGCTGCGGGCCGTCGGGGCCGCCTGGCAGAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | TCCGGTGCGTCGATCTCAGCGGTGGAACGCCACCGACGGCAGGCCTaGACCGTCGGCGTGGGCGCTGGGCCACGACGGGGCCGGGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGASISAVERHRRQA*TVGVGAGPRRGRGG Trigger: ACCGCCCCGGCCCCGTCGTGGCCCAGCGCCCACGCCGACGGTCCAGGCCTGCCGTCGGTGGCGTTCCACCGCTGAGATCGACGCACCGGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | GCGCGCGGCCCAGTAGACTGGTCTCAGACTGCGAGCGCGCCGCTTTaGGCGCCCTCGGCGATCCCCGACGCCCCGACGGCTCTGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGPVDWSQTASAPL*APSAIPDAPTALPG Trigger: GCCTGGCAGAGCCGTCGGGGCGTCGGGGATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | GGCCGAGCGGCACCGGCCGCCCTACCGCTGAGCACTCGGAGTCGCTaGCTGCGCAACCGTACAACAGCCGGCGCGGGGGCGCAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GRAAPAALPLSTRSR*LRNRTTAGAGAQMA Trigger: CGCCATCTGCGCCCCCGCGCCGGCTGTTGTACGGTTGCGCAGGCAGCGACTCCGAGTGCTCAGCGGTAGGGCGGCCGGTGCCGCTCGGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | CGCCCGGGATGTACTGTGCCTTCACGAGGCGGCCCTCTGCCGGACTaGAGGGCGGCGACGCGGCGGCCGGAGGCGCGGGTTCGGGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RPGCTVPSRGGPLPD*RAATRRPEARVRVE Trigger: TTCCACCCGAACCCGCGCCTCCGGCCGCCGCGTCGCCGCCCTCCAGTCCGGCAGAGGGCCGCCTCGTGAAGGCACAGTACATCCCGGGCG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS TCA 90 bp | TCCAGACGGCATCCGACGGCCGAGCGGCACCGGCCGCCCTACCGCTaGGCACTCGGAGTCGCTGCCTGCGCAACCGTACAACAGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SRRHPTAERHRPPYR*ALGVAACATVQQPA Trigger: CGCCGGCTGTTGTACGGTTGCGCAGGCAGCGACTCCGAGTGCTCAGCGGTAGGGCGGCCGGTGCCGCTCGGCCGTCGGATGCCGTCTGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | GGTTCGTCTCGCTCGGCCGTGGGGTACTTGGGTGGCGGAGCGGCGTaGGCGCGGCCCAGTAGACTGGTCTCAGACTGCGAGCGCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GSSRSAVGYLGGGAA*ARPSRLVSDCERAA Trigger: AGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCACGCCGCTCCGCCACCCAAGTACCCCACGGCCGAGCGAGACGAACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | TGGGGTACTTGGGTGGCGGAGCGGCGTGCGCGCGGCCCAGTAGACTaGTCTCAGACTGCGAGCGCGCCGCTTTGCGCGCCCTCGGCGATC | + |
|
Preference number: 5 (lower is better) Translates to: WGTWVAERRARGPVD*SQTASAPLCAPSAI Trigger: GATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCACGCCGCTCCGCCACCCAAGTACCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | CCTGCCTCTCTCGGAGCCAATGCAACTCGCAGAGCCCGGCCAGGCTaGCTTCCAACCATCCCCGCAGCCGACCCCGCTCCGGGCTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PASLGANATRRARPG*LPTIPAADPAPGSP Trigger: CGGTGAGCCCGGAGCGGGGTCGGCTGCGGGGATGGTTGGAAGGCAGCCTGGCCGGGCTCTGCGAGTTGCATTGGCTCCGAGAGAGGCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | ATCCCGGGCTGGGCCAGCCGCAGCGCCTGCTGCACGCGGTACTCCTaGCTCTCTCGGAGCCAATGCAACTCGCAGAGCCCGGCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPGWASRSACCTRYS*LSRSQCNSQSPARL Trigger: CAGCCTGGCCGGGCTCTGCGAGTTGCATTGGCTCCGAGAGAGGCAGGAGTACCGCGTGCAGCAGGCGCTGCGGCTGGCCCAGCCCGGGAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | CACGGTACGCGTCCACTTGGCCTTGGGCTGCGCAGAGCCACCGCGTaGAGTGGGCTAGGTGTCAGGAAGGGCCCGGCACGAGCCCGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HGTRPLGLGLRRATA*SGLGVRKGPARARR Trigger: ACGGCGGGCTCGTGCCGGGCCCTTCCTGACACCTAGCCCACTGCACGCGGTGGCTCTGCGCAGCCCAAGGCCAAGTGGACGCGTACCGTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS CCA 90 bp | TACGCGTCCACTTGGCCTTGGGCTGCGCAGAGCCACCGCGTGCAGTaGGCTAGGTGTCAGGAAGGGCCCGGCACGAGCCCGCCGTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: YASTWPWAAQSHRVQ*ARCQEGPGTSPPFR Trigger: GCGGAACGGCGGGCTCGTGCCGGGCCCTTCCTGACACCTAGCCCACTGCACGCGGTGGCTCTGCGCAGCCCAAGGCCAAGTGGACGCGTA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | CGCAGCGCCTGCTGCACGCGGTACTCCTGCCTCTCTCGGAGCCAATaGAACTCGCAGAGCCCGGCCAGGCTGCCTTCCAACCATCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSACCTRYSCLSRSQ*NSQSPARLPSNHPR Trigger: GCGGGGATGGTTGGAAGGCAGCCTGGCCGGGCTCTGCGAGTTGCATTGGCTCCGAGAGAGGCAGGAGTACCGCGTGCAGCAGGCGCTGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 90 bp | TGGGACTGGCGTCGCCTAAGGACTTGGGTCTCTCACTGGCATAGATaGCCCGGGGGTCCGAGGGACCCAGGCGTCCATAGGAGCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: WDWRRLRTWVSHWHR*PGGPRDPGVHRSQI Trigger: GATCTGGCTCCTATGGACGCCTGGGTCCCTCGGACCCCCGGGGCATCTATGCCAGTGAGAGACCCAAGTCCTTAGGCGACGCCAGTCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CAA 90 bp | CCCCTAAGACAGTGCCACTTCCTCTTCCAGGGCATGGCACTCTGTAGGCATAACCGCGTCCACTTGGCCTaGGGCTGCGCAGAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PLRQCHFLFQGMALCRHNRVHLA*GCAEPP Trigger: CGGTGGCTCTGCGCAGCCCAAGGCCAAGTGGACGCG...GTTATGCCTACAGAGTGCCATGCCCTGGAAGAGGAAGTGGCACTGTCTTAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CAA 90 bp | ACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGACAATCGCGCGGCCGTTCCCTaGGCGGGGACTGCTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: TEGCLLVQGFENQLSWDNRAAVP*AGTAPH Trigger: GTGTGGAGCAGTCCCCGCCAAGGGAACGGCCGCGCG...ATTGTCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CAA 90 bp | ACGGAGGGGTGCCTTCTGGTTCAAGGCTTTGAAAACCAGCTGTCGTGGGACAATATCTTCACGAAGACCTaGGCGGGGCCCGCAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TEGCLLVQGFENQLSWDNIFTKT*AGPAGV Trigger: GACGCCTGCGGGCCCCGCCAAGGTCTTCGTGAAGAT...ATTGTCCCACGACAGCTGGTTTTCAAAGCCTTGAACCAGAAGGCACCCCTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGGCTATGTCAGAGAAGTGGAGAACAGACTAAGCTTCTAAAATTAAAACGGGGCGGCCGCCACCAGTaGCTGCGGCCACACGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RRLCQRSGEQTKLLKLKRGGRHQ*LRPHEA Trigger: GGCCTCGTGTGGCCGCAGCAACTGGTGGCGGCCGCC...CCGTTTTAATTTTAGAAGCTTAGTCTGTTCTCCACTTCTCTGACATAGCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS-3UTR CAA 90 bp | CTCATTCAGTGCAGAACAAGAATCCAGGGGTATGTAACACTGTGCATTTATTTAAGCGCGTGCGATGCCTaGATCTTCACGAAGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LIQCRTRIQGYVTLCIYLSACDA*IFTKTL Trigger: CAAGGTCTTCGTGAAGATCAAGGCATCGCACGCGCT...TAAATAAATGCACAGTGTTACATACCCCTGGATTCTTGTTCTGCACTGAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 72 bp | CCCGACGGCGAGGCCCCGGCGGCCGCCACCAGTTGCTaGGGCCACACGAGGCCTCCGCTGCCGTCGGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PDGEAPAAATSC*GHTRPPLPSES Trigger: CGACTCCGACGGCAGCGGAGGCCTCGTGTGGCCGCAGCAACTGGTGGCGGCCGCCGGGGCCTCGCCGTCGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
||
| CDS GCA 72 bp | GCCCCTGGAGGCCGCGGGCGCGCCCGGGATGTACTGTaGCTTCACGAGGCGGCCCTCTGCCGGACTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: APGGRGRARDVL*LHEAALCRTGG Trigger: CCCTCCAGTCCGGCAGAGGGCCGCCTCGTGAAGGCACAGTACATCCCGGGCGCGCCCGCGGCCTCCAGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | GCAGGAGCGCCGAGATGTAGCCGTCAAGGGGCCGGCTaGCCGCCCCGTCCGGCGAGCCGCACGGTACGCGTC | + |
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Preference number: 6 (lower is better) Translates to: AGAPRCSRQGAG*PPRPASRTVRV Trigger: GACGCGTACCGTGCGGCTCGCCGGACGGGGCGGCCAGCCGGCCCCTTGACGGCTACATCTCGGCGCTCCTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | GGGGGCGGCGGCCATCCGGTGCGTCGATCTCAGCGGTaGAACGCCACCGACGGCAGGCCTGGACCGTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: GGGGHPVRRSQR*NATDGRPGPSA Trigger: CGCCGACGGTCCAGGCCTGCCGTCGGTGGCGTTCCACCGCTGAGATCGACGCACCGGATGGCCGCCGCCCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | GCGGCGTGCGCGCGGCCCAGTAGACTGGTCTCAGACTaGGAGCGCGCCGCTTTGCGCGCCCTCGGCGATCCC | + |
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Preference number: 6 (lower is better) Translates to: AACARPSRLVSD*ERAALRALGDP Trigger: GGGATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCACGCCGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | GCACCGGCCGCCCTACCGCTGAGCACTCGGAGTCGCTaGCTGCGCAACCGTACAACAGCCGGCGCGGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: APAALPLSTRSR*LRNRTTAGAGA Trigger: CGCCCCCGCGCCGGCTGTTGTACGGTTGCGCAGGCAGCGACTCCGAGTGCTCAGCGGTAGGGCGGCCGGTGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | TGTACTGTGCCTTCACGAGGCGGCCCTCTGCCGGACTaGAGGGCGGCGACGCGGCGGCCGGAGGCGCGGGTT | + |
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Preference number: 6 (lower is better) Translates to: CTVPSRGGPLPD*RAATRRPEARV Trigger: AACCCGCGCCTCCGGCCGCCGCGTCGCCGCCCTCCAGTCCGGCAGAGGGCCGCCTCGTGAAGGCACAGTACA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | TGGGTGGCGGAGCGGCGTGCGCGCGGCCCAGTAGACTaGTCTCAGACTGCGAGCGCGCCGCTTTGCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: WVAERRARGPVD*SQTASAPLCAP Trigger: GGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCACGCCGCTCCGCCACCCA 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | GCGGTCGGGGTTCGTCTCGCTCGGCCGTGGGGTACTTaGGTGGCGGAGCGGCGTGCGCGCGGCCCAGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: AVGVRLARPWGT*VAERRARGPVD Trigger: GTCTACTGGGCCGCGCGCACGCCGCTCCGCCACCCAAGTACCCCACGGCCGAGCGAGACGAACCCCGACCGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | TCGATCTCAGCGGTGGAACGCCACCGACGGCAGGCCTaGACCGTCGGCGTGGGCGCTGGGCCACGACGGGGC | + |
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Preference number: 6 (lower is better) Translates to: SISAVERHRRQA*TVGVGAGPRRG Trigger: GCCCCGTCGTGGCCCAGCGCCCACGCCGACGGTCCAGGCCTGCCGTCGGTGGCGTTCCACCGCTGAGATCGA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CAA 90 bp | TGCGCGCGGCCCAGTAGACTGGTCTCAGACTGCGAGCGCGCCGCTTaGCGCGCCCTCGGCGATCCCCGACGCCCCGACGGCTCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CARPSRLVSDCERAA*RALGDPRRPDGSAR Trigger: CCTGGCAGAGCCGTCGGGGCGTCGGGGATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CAA 72 bp | CCCAGTAGACTGGTCTCAGACTGCGAGCGCGCCGCTTaGCGCGCCCTCGGCGATCCCCGACGCCCCGACGGC | + |
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Preference number: 6 (lower is better) Translates to: PSRLVSDCERAA*RALGDPRRPDG Trigger: GCCGTCGGGGCGTCGGGGATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | CCAGTAGACTGGTCTCAGACTGCGAGCGCGCCGCTTTaGGCGCCCTCGGCGATCCCCGACGCCCCGACGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVDWSQTASAPL*APSAIPDAPTA Trigger: AGCCGTCGGGGCGTCGGGGATCGCCGAGGGCGCGCAAAGCGGCGCGCTCGCAGTCTGAGACCAGTCTACTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | CGCTCGGCCGTGGGGTACTTGGGTGGCGGAGCGGCGTaGGCGCGGCCCAGTAGACTGGTCTCAGACTGCGAG | + |
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Preference number: 6 (lower is better) Translates to: RSAVGYLGGGAA*ARPSRLVSDCE Trigger: CTCGCAGTCTGAGACCAGTCTACTGGGCCGCGCGCACGCCGCTCCGCCACCCAAGTACCCCACGGCCGAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS TCA 72 bp | CAGGAAGGGCCCGGCACGAGCCCGCCGTTCCGCGGATaGGCAGGTCTCAGCTCCGGCTGCTGCCGTCGGATA | + |
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Preference number: 6 (lower is better) Translates to: QEGPGTSPPFRG*AGLSSGCCRRI Trigger: TATCCGACGGCAGCAGCCGGAGCTGAGACCTGCTCATCCGCGGAACGGCGGGCTCGTGCCGGGCCCTTCCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS TCA 72 bp | CATCCGACGGCCGAGCGGCACCGGCCGCCCTACCGCTaGGCACTCGGAGTCGCTGCCTGCGCAACCGTACAA | + |
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Preference number: 6 (lower is better) Translates to: HPTAERHRPPYR*ALGVAACATVQ Trigger: TTGTACGGTTGCGCAGGCAGCGACTCCGAGTGCTCAGCGGTAGGGCGGCCGGTGCCGCTCGGCCGTCGGATG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | ACTTGGCCTTGGGCTGCGCAGAGCCACCGCGTGCAGTaGGCTAGGTGTCAGGAAGGGCCCGGCACGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: TWPWAAQSHRVQ*ARCQEGPGTSP Trigger: CGGGCTCGTGCCGGGCCCTTCCTGACACCTAGCCCACTGCACGCGGTGGCTCTGCGCAGCCCAAGGCCAAGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | TGGGCCAGCCGCAGCGCCTGCTGCACGCGGTACTCCTaGCTCTCTCGGAGCCAATGCAACTCGCAGAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: WASRSACCTRYS*LSRSQCNSQSP Trigger: CGGGCTCTGCGAGTTGCATTGGCTCCGAGAGAGGCAGGAGTACCGCGTGCAGCAGGCGCTGCGGCTGGCCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | CGTCCACTTGGCCTTGGGCTGCGCAGAGCCACCGCGTaGAGTGGGCTAGGTGTCAGGAAGGGCCCGGCACGA | + |
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Preference number: 6 (lower is better) Translates to: RPLGLGLRRATA*SGLGVRKGPAR Trigger: TCGTGCCGGGCCCTTCCTGACACCTAGCCCACTGCACGCGGTGGCTCTGCGCAGCCCAAGGCCAAGTGGACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | CTCGCTGGCGCTCGACTCGCTTTCGCCATAGCCTCCTaGAGCGCATCCAGACGGCATCCGACGGCCGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: LAGARLAFAIAS*SASRRHPTAER Trigger: CCGCTCGGCCGTCGGATGCCGTCTGGATGCGCTCCAGGAGGCTATGGCGAAAGCGAGTCGAGCGCCAGCGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CCA 72 bp | GCACTGCAACCCGGGCACCCACCGACTCTGGGGCGCTaGGACTGGCGTCGCCTAAGGACTTGGGTCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ALQPGHPPTLGR*DWRRLRTWVSH Trigger: GTGAGAGACCCAAGTCCTTAGGCGACGCCAGTCCCAGCGCCCCAGAGTCGGTGGGTGCCCGGGTTGCAGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | TGCTGCACGCGGTACTCCTGCCTCTCTCGGAGCCAATaGAACTCGCAGAGCCCGGCCAGGCTGCCTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: CCTRYSCLSRSQ*NSQSPARLPSN Trigger: GTTGGAAGGCAGCCTGGCCGGGCTCTGCGAGTTGCATTGGCTCCGAGAGAGGCAGGAGTACCGCGTGCAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | CGTCGCCTAAGGACTTGGGTCTCTCACTGGCATAGATaGCCCGGGGGTCCGAGGGACCCAGGCGTCCATAGG | + |
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Preference number: 6 (lower is better) Translates to: RRLRTWVSHWHR*PGGPRDPGVHR Trigger: CCTATGGACGCCTGGGTCCCTCGGACCCCCGGGGCATCTATGCCAGTGAGAGACCCAAGTCCTTAGGCGACG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CAA 72 bp | TTCAGCGCGTGCGATGCCTTGATCTTCACGAAGACCTaGGCGGGGCCCGCAGGCGTCCCTCCACCAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FSACDALIFTKT*AGPAGVPPPAA Trigger: TGCTGCTGGTGGAGGGACGCCTGCGGGCCCCGCCAAGGTCTTCGTGAAGATCAAGGCATCGCACGCGCTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS TCA 72 bp | GGAGAAGCCACTGTCCCCGCAGAAGGTGGAGGGTGGTaGATCTGGGCCTCCAGTAGAACTGGGGTCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: GEATVPAEGGGW*IWASSRTGVFI Trigger: TATGAAGACCCCAGTTCTACTGGAGGCCCAGATTCACCACCCTCCACCTTCTGCGGGGACAGTGGCTTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS TCA 72 bp | AACGAAGGATCTTTTTCTTCAGCGCGTGCGATGCCTTaGTCTTCACGAAGACCTTGGCGGGGCCCGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: NEGSFSSARAMP*SSRRPWRGPQA Trigger: CGCCTGCGGGCCCCGCCAAGGTCTTCGTGAAGATCAAGGCATCGCACGCGCTGAAGAAAAAGATCCTTCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS CAA 72 bp | AAACGAAGGATCTTTTTCTTCAGCGCGTGCGATGCCTaGATCTTCACGAAGACCTTGGCGGGGCCCGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: KRRIFFFSACDA*IFTKTLAGPAG Trigger: GCCTGCGGGCCCCGCCAAGGTCTTCGTGAAGATCAAGGCATCGCACGCGCTGAAGAAAAAGATCCTTCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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| CDS GCA 72 bp | CCCGACCGAAAACGAAGGATCTTTTTCTTCAGCGCGTaGGATGCCTTGATCTTCACGAAGACCTTGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PDRKRRIFFFSA*DALIFTKTLAG Trigger: CCCCGCCAAGGTCTTCGTGAAGATCAAGGCATCGCACGCGCTGAAGAAAAAGATCCTTCGTTTTCGGTCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108493.3 |
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