RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DAB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028519

Ensembl transcript IDs: ENSMUST00000106826.8, ENSMUST00000106827.8, ENSMUST00000106830.9, ENSMUST00000143644.8, ENSMUST00000146078.8, ENSMUST00000149672.2

Found 353 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTaGCAGGAAAGAGACCTGGCTGGCCCCATGCGATGGGCTGAGCTC +
Preference number: 1 (lower is better)
Translates to: RLAGTARPQWARLAG*QERDLAGPMRWAEL
Trigger: GAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 90 bp GGGCCAGGCTTGCTGGGTGGCAGGAAAGAGACCTGGCTGGCCCCATaGGATGGGCTGAGCTCCTGGTATCACCTGAGCGACGGGTGGCTG +
Preference number: 1 (lower is better)
Translates to: GPGLLGGRKETWLAP*DGLSSWYHLSDGWL
Trigger: CAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp CCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAAGAGACCTaGCTGGCCCCATGCGATGGGCTGAGCTCCTGGTATCACCTGAGC +
Preference number: 1 (lower is better)
Translates to: PGHSGPGLLGGRKET*LAPCDGLSSWYHLS
Trigger: GCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 90 bp AAAGGACAGGGGAGACAGGATGGCAGACCAGGCCCCGTGGAGAGATaGCACGCACGCGCGCACGCACGTCGCCACAGCCAGAAGGCATAC +
Preference number: 1 (lower is better)
Translates to: KGQGRQDGRPGPVER*HARAHARRHSQKAY
Trigger: GTATGCCTTCTGGCTGTGGCGACGTGCGTGCGCGCGTGCGTGGCATCTCTCCACGGGGCCTGGTCTGCCATCCTGTCTCCCCTGTCCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp GGACAAAGAAAGGACAGGGGAGACAGGATGGCAGACCAGGCCCCGTaGAGAGATGCCACGCACGCGCGCACGCACGTCGCCACAGCCAGA +
Preference number: 1 (lower is better)
Translates to: GQRKDRGDRMADQAP*RDATHARTHVATAR
Trigger: TCTGGCTGTGGCGACGTGCGTGCGCGCGTGCGTGGCATCTCTCCACGGGGCCTGGTCTGCCATCCTGTCTCCCCTGTCCTTTCTTTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp GGCAGGAAAGAGACCTGGCTGGCCCCATGCGATGGGCTGAGCTCCTaGTATCACCTGAGCGACGGGTGGCTGAGCACCCATGGCGATCTG +
Preference number: 1 (lower is better)
Translates to: GRKETWLAPCDGLSS*YHLSDGWLSTHGDL
Trigger: CAGATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp AGGCTTGCTGGGTGGCAGGAAAGAGACCTGGCTGGCCCCATGCGATaGGCTGAGCTCCTGGTATCACCTGAGCGACGGGTGGCTGAGCAC +
Preference number: 1 (lower is better)
Translates to: RLAGWQERDLAGPMR*AELLVSPERRVAEH
Trigger: GTGCTCAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp GCCCCATGCGATGGGCTGAGCTCCTGGTATCACCTGAGCGACGGGTaGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: APCDGLSSWYHLSDG*LSTHGDLLLNKGLL
Trigger: CAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp GCTGAGCTCCTGGTATCACCTGAGCGACGGGTGGCTGAGCACCCATaGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCCCAGAAGGATG +
Preference number: 1 (lower is better)
Translates to: AELLVSPERRVAEHP*RSAVEQGAAGPRRM
Trigger: CATCCTTCTGGGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp GGTACAGGTCAGGGAGGGCTGGTCAGGCTTCCGGGAGGGTACGGGTaGAGGCTGGACCATCTGGAAATCCTTGAACGACTCCTTCCCCAT +
Preference number: 1 (lower is better)
Translates to: GTGQGGLVRLPGGYG*RLDHLEILERLLPH
Trigger: ATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCCTCCCTGACCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp GGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTaGAAATCCTTGAACGACTCCTTCCCCATTTTCTGCCTGGGCTTG +
Preference number: 1 (lower is better)
Translates to: GWSGFREGTGGGWTI*KSLNDSFPIFCLGL
Trigger: CAAGCCCAGGCAGAAAATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 90 bp ATCCTGTGCCACCCCGACTTTGTTGAAGTAACTGGAGAAGGCCTCTaGGGTACAGGTCAGGGAGGGCTGGTCAGGCTTCCGGGAGGGTAC +
Preference number: 1 (lower is better)
Translates to: ILCHPDFVEVTGEGL*GTGQGGLVRLPGGY
Trigger: GTACCCTCCCGGAAGCCTGACCAGCCCTCCCTGACCTGTACCTCAGAGGCCTTCTCCAGTTACTTCAACAAAGTCGGGGTGGCACAGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp CCATTAATTCTCAAACAGGACAAAGAAAGGACAGGGGAGACAGGATaGCAGACCAGGCCCCGTGGAGAGATGCCACGCACGCGCGCACGC +
Preference number: 1 (lower is better)
Translates to: PLILKQDKERTGETG*QTRPRGEMPRTRAR
Trigger: GCGTGCGCGCGTGCGTGGCATCTCTCCACGGGGCCTGGTCTGCCATCCTGTCTCCCCTGTCCTTTCTTTGTCCTGTTTGAGAATTAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp TCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCACTGACGTaGGATGCTGATGATTTGGATGGAGAGCTCTGCCTAGGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SKPSSKMSSAVGSLT*DADDLDGELCLGAG
Trigger: CCCAGCCCCTAGGCAGAGCTCTCCATCCAAATCATCAGCATCCCACGTCAGTGACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp GAGAGGCTCTGGCTCCCAGACCTGCGCTATCTAGCTACCGTCTTGTaGACTTATATTATCACCACTGGGCTCACCACTGGGCTCCCCAAA +
Preference number: 1 (lower is better)
Translates to: ERLWLPDLRYLATVL*TYIITTGLTTGLPK
Trigger: TTTGGGGAGCCCAGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAGACGGTAGCTAGATAGCGCAGGTCTGGGAGCCAGAGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 90 bp CCAGTCTTCCCAGAAACACACCTGGCAAGTGAGCCCGGTCCATCATaGCCATTGCACCTTACGCTCCATCTGCTACCTTCTCTACAGTGT +
Preference number: 1 (lower is better)
Translates to: PVFPETHLASEPGPS*PLHLTLHLLPSLQC
Trigger: ACACTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTGTTTCTGGGAAGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp CCTGCGCTATCTAGCTACCGTCTTGTGGACTTATATTATCACCACTaGGCTCACCACTGGGCTCCCCAAATGGATCACTGGTGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: PALSSYRLVDLYYHH*AHHWAPQMDHWWRR
Trigger: CCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAGACGGTAGCTAGATAGCGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 90 bp CTCCTGTTCACTAGCTGCTATTGGCCCACGACTCCTGCCTGTCTCTaGACTCTAGCTTCCTACCAGTCTTCCCAGAAACACACCTGGCAA +
Preference number: 1 (lower is better)
Translates to: LLFTSCYWPTTPACL*TLASYQSSQKHTWQ
Trigger: TTGCCAGGTGTGTTTCTGGGAAGACTGGTAGGAAGCTAGAGTTCAGAGACAGGCAGGAGTCGTGGGCCAATAGCAGCTAGTGAACAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 90 bp GTCACAGCCATGGAAGGAGACCTGGCTTTAAGAAGGAACGTGGGCTaGCTTGTAAGCCTCCTGTCTTTACCACAGTGCCTGACACACAGG +
Preference number: 1 (lower is better)
Translates to: VTAMEGDLALRRNVG*LVSLLSLPQCLTHR
Trigger: CCTGTGTGTCAGGCACTGTGGTAAAGACAGGAGGCTTACAAGTCAGCCCACGTTCCTTCTTAAAGCCAGGTCTCCTTCCATGGCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 90 bp CAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCGACTTTGTTaGAGTAACTGGAGAAGGCCTCTGAGGTACAGGTCAGGGAGGGCT +
Preference number: 1 (lower is better)
Translates to: QSHHSRLYPVPPRLC*SNWRRPLRYRSGRA
Trigger: AGCCCTCCCTGACCTGTACCTCAGAGGCCTTCTCCAGTTACTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp TATCACCACTGGGCTCACCACTGGGCTCCCCAAATGGATCACTGGTaGAGGAGGCCTGTGATCCATCAGGTGCTTCTTGTTCTTCACTTT +
Preference number: 1 (lower is better)
Translates to: YHHWAHHWAPQMDHW*RRPVIHQVLLVLHF
Trigger: AAAGTGAAGAACAAGAAGCACCTGATGGATCACAGGCCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTGGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp TATTATCACCACTGGGCTCACCACTGGGCTCCCCAAATGGATCACTaGTGGAGGAGGCCTGTGATCCATCAGGTGCTTCTTGTTCTTCAC +
Preference number: 1 (lower is better)
Translates to: YYHHWAHHWAPQMDH*WRRPVIHQVLLVLH
Trigger: GTGAAGAACAAGAAGCACCTGATGGATCACAGGCCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTGGTGATAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 90 bp TCCCAGAAACACACCTGGCAAGTGAGCCCGGTCCATCATGCCCATTaGACCTTACGCTCCATCTGCTACCTTCTCTACAGTGTAATGGTA +
Preference number: 1 (lower is better)
Translates to: SQKHTWQVSPVHHAH*TLRSICYLLYSVMV
Trigger: TACCATTACACTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTGTTTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp TTCCAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTaGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGTGG +
Preference number: 1 (lower is better)
Translates to: FQIGEGSEARVRRRK*ISRSPITAAGFLVW
Trigger: CCACACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
3UTR TCA 90 bp AGAGCCCAAGAGAGCCTGTTGTACTGCAGATTCCCATGCCATCCGTaGAGCACCCACCATGAGCTCGCATTGATGCTATTTCTTAGGTCT +
Preference number: 1 (lower is better)
Translates to: RAQESLLYCRFPCHP*STHHELALMLFLRS
Trigger: AGACCTAAGAAATAGCATCAATGCGAGCTCATGGTGGGTGCTTCACGGATGGCATGGGAATCTGCAGTACAACAGGCTCTCTTGGGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
3UTR TCA 90 bp TGCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTaGTGCCTGCCACTCCCAATCTGTGGTCTCTACAGTGGTCAACAG +
Preference number: 1 (lower is better)
Translates to: CFGLKRVSANLVTIL*CLPLPICGLYSGQQ
Trigger: CTGTTGACCACTGTAGAGACCACAGATTGGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 90 bp ACTGTGGTCACAAAGGATCCCTTGCTTTGGCCTCAAACGAGTCAGTaGCAACCTTGTCACAATTCTCTGATGCCTGCCACTCCCAATCTG +
Preference number: 1 (lower is better)
Translates to: TVVTKDPLLWPQTSQ*QPCHNSLMPATPNL
Trigger: CAGATTGGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTTTGTGACCACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp GAGTTGGTAGATGGTGTGGTAGAAGTCACAGGGGTCAAGTTCAGTTaGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACC +
Preference number: 1 (lower is better)
Translates to: ELVDGVVEVTGVKFS*EMSKSSQSSVSCAT
Trigger: GGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACTTGACCCCTGTGACTTCTACCACACCATCTACCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 90 bp TCCCATCACGGCTGCTGGCTTCTTAGTGTGGAAAAATTCTCTCCCTaGAGAGGCTGGCAACCCTGGCCTTCAGAAATCATCTTAATTCTT +
Preference number: 1 (lower is better)
Translates to: SHHGCWLLSVEKFSP*RGWQPWPSEIILIL
Trigger: AAGAATTAAGATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAGCCAGCAGCCGTGATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
3UTR CCA 90 bp GGCTGCTGGCTTCTTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTaGCAACCCTGGCCTTCAGAAATCATCTTAATTCTTCTGCAGGTT +
Preference number: 1 (lower is better)
Translates to: GCWLLSVEKFSPCRG*QPWPSEIILILLQV
Trigger: AACCTGCAGAAGAATTAAGATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAGCCAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
3UTR CCA 90 bp GAGGTTATATCAGGAGGGGTGGACATGTCTCCAAAAAGTTCTAATTaGGTCACAGCCATGGAAGGAGACCTGGCTTTAAGAAGGAACGTG +
Preference number: 1 (lower is better)
Translates to: EVISGGVDMSPKSSN*VTAMEGDLALRRNV
Trigger: CACGTTCCTTCTTAAAGCCAGGTCTCCTTCCATGGCTGTGACCCAATTAGAACTTTTTGGAGACATGTCCACCCCTCCTGATATAACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 90 bp CTTCTTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTaGCCTTCAGAAATCATCTTAATTCTTCTGCAGGTTCTGCGTTCA +
Preference number: 1 (lower is better)
Translates to: LLSVEKFSPCRGWQP*PSEIILILLQVLRS
Trigger: TGAACGCAGAACCTGCAGAAGAATTAAGATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
3UTR TCA 90 bp GTGACAAATTTAGTGCTAAGAGGAGGAGGAAGCAAGCATTGCACATaGGAATCTTCCTACCTATCTAAGCAGAACTGTGCAGACTCCCCA +
Preference number: 1 (lower is better)
Translates to: VTNLVLRGGGSKHCT*ESSYLSKQNCADSP
Trigger: TGGGGAGTCTGCACAGTTCTGCTTAGATAGGTAGGAAGATTCTCATGTGCAATGCTTGCTTCCTCCTCCTCTTAGCACTAAATTTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 90 bp CTAGGCATCTTCCTTAAGTTCAGATCCAGTTACTGTCATGTTCAGTaGATTATGGCAATTGGCTGGGCTGTCACCACCCACTTTAAAGCT +
Preference number: 1 (lower is better)
Translates to: LGIFLKFRSSYCHVQ*IMAIGWAVTTHFKA
Trigger: AGCTTTAAAGTGGGTGGTGACAGCCCAGCCAATTGCCATAATTCACTGAACATGACAGTAACTGGATCTGAACTTAAGGAAGATGCCTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 90 bp CAAGTGAGCCCGGTCCATCATGCCCATTGCACCTTACGCTCCATCTaGTACCTTCTCTACAGTGTAATGGTATTATTAAAAAGCATCTTT +
Preference number: 1 (lower is better)
Translates to: QVSPVHHAHCTLRSI*YLLYSVMVLLKSIF
Trigger: AAAGATGCTTTTTAATAATACCATTACACTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 90 bp TCTTCCTTAAGTTCAGATCCAGTTACTGTCATGTTCAGTGAATTATaGCAATTGGCTGGGCTGTCACCACCCACTTTAAAGCTAACTGCA +
Preference number: 1 (lower is better)
Translates to: SSLSSDPVTVMFSEL*QLAGLSPPTLKLTA
Trigger: TGCAGTTAGCTTTAAAGTGGGTGGTGACAGCCCAGCCAATTGCCATAATTCACTGAACATGACAGTAACTGGATCTGAACTTAAGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 90 bp TCAAAGCATACCGGCCAATTTCAATCAGTCATCTCAAGGTTAGTTTaGCTTTTCAATACTCCCAGATCCAATCACATGATTCTTGTGGGT +
Preference number: 1 (lower is better)
Translates to: SKHTGQFQSVISRLV*LFNTPRSNHMILVG
Trigger: ACCCACAAGAATCATGTGATTGGATCTGGGAGTATTGAAAAGTCAAACTAACCTTGAGATGACTGATTGAAATTGGCCGGTATGCTTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 90 bp GTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTaGCTTGTGATTCAAGTTAATTCACTTCATAAGAGGCTTTCCCTC +
Preference number: 1 (lower is better)
Translates to: VLATFLIIMNHQPRH*LVIQVNSLHKRLSL
Trigger: GAGGGAAAGCCTCTTATGAAGTGAATTAACTTGAATCACAAGGCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 90 bp AACCAGTATTCTGCCAATGGAAATATAGATGGCAGTTTAAAATCTTaGCTTGATCGCCCTCATTTTAATGTGTCATCTAGGCATCTTCCT +
Preference number: 1 (lower is better)
Translates to: NQYSANGNIDGSLKS*LDRPHFNVSSRHLP
Trigger: AGGAAGATGCCTAGATGACACATTAAAATGAGGGCGATCAAGTCAAGATTTTAAACTGCCATCTATATTTCCATTGGCAGAATACTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 90 bp CATGAAGGCGGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTaGCTGGGTGGCAGGAAAGAGACCTGGCTGGCCCCATGCGATGGG +
Preference number: 2 (lower is better)
Translates to: HEGGWRELPGHSGPG*LGGRKETWLAPCDG
Trigger: CCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCCGCCTTCATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAAATGGCGATCTGCTGTTaGACAAGGGGCTGCTGGCCC +
Preference number: 2 (lower is better)
Translates to: GWRELPGHSGPGLLGGRKMAICC*TRGCWP
Trigger: GGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCAT...TTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 90 bp TATCACCTGAGCGACGGGTGGCTGAGCACCCATGGCGATCTGCTGTaGAACAAGGGGCTGCTGGCCCCAGAAGGATGGGAGGACGGCGCC +
Preference number: 2 (lower is better)
Translates to: YHLSDGWLSTHGDLL*NKGLLAPEGWEDGA
Trigger: GGCGCCGTCCTCCCATCCTTCTGGGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp CTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTACTGCCCGGCCACAGTaGGCCAGGCTTGCTGGGTGG +
Preference number: 2 (lower is better)
Translates to: LVRLPGGYGWRLDHLEILTARPQ*ARLAGW
Trigger: CCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGT...AAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAAGTGGCTGAGCACCCATaGCGATCTGCTGTTGAACAA +
Preference number: 2 (lower is better)
Translates to: GWRELPGHSGPGLLGGRKVAEHP*RSAVEQ
Trigger: TTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCAC...TTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTACAGGGGAGACAGGATaGCAGACCAGGCCCCGTGGA +
Preference number: 2 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLATGETG*QTRPRG
Trigger: TCCACGGGGCCTGGTCTGCCATCCTGTCTCCCCTGT...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp GGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCGGGGTGAGGGGACCTTaGAACATGGCGGCTGCTAAA +
Preference number: 2 (lower is better)
Translates to: GLVRLPGGYGWRLDHLEIGVRGP*NMAAAK
Trigger: TTTAGCAGCCGCCATGTTCCAAGGTCCCCTCACCCC...GATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp CGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTGAACGACTCCTTCGTGGGCCAGGCTTGCTaGGTGGCAGGAAAGAGACCT +
Preference number: 2 (lower is better)
Translates to: REGTGGGWTIWKSLNDSFVGQAC*VAGKRP
Trigger: AGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCAC...GAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 90 bp GGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTaGAACGACTCCTTCCCCATTTTCTGCCTGGGCTTGTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: GFREGTGGGWTIWKS*NDSFPIFCLGLSLC
Trigger: ACAGAGTGACAAGCCCAGGCAGAAAATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR GCA 90 bp CGGGTGGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCCCGTATCTGCCATTGGTTaGCAAAAACCATGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: RVAEHPWRSAVEQGAAGPVSAIG*QKPCCS
Trigger: GGAACAACATGGTTTTTGGCAACCAATGGCAGATAC...GGGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 90 bp ATAGAGAGGCTCTGGCTCCCAGACCTGCGCTATCTAGCTACCGTCTaGTGGACTTATATTATCACCACTGGGCTCACCACTGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: IERLWLPDLRYLATV*WTYIITTGLTTGLP
Trigger: GGGGAGCCCAGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAGACGGTAGCTAGATAGCGCAGGTCTGGGAGCCAGAGCCTCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTCTGTGGTCTCTACAGTaGTCAACAGGTAGCAAAAGC +
Preference number: 2 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLALWSLQ*STGSKS
Trigger: GCTTTTGCTACCTGTTGACCACTGTAGAGACCACAG...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp ACTTTTGCTGGGACTTTCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCCACCTGAGCGACGGGTaGCTGAGCACCCATGGCGAT +
Preference number: 2 (lower is better)
Translates to: TFAGTFKAFFEDVICGRVHLSDG*LSTHGD
Trigger: ATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTG...GACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGAAAGTCCCAGCAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp CTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTACCATGAGCTCGCATTaGTGCTATTTCTTAGGTCTG +
Preference number: 2 (lower is better)
Translates to: LVRLPGGYGWRLDHLEILTMSSH*CYFLGL
Trigger: CAGACCTAAGAAATAGCATCAATGCGAGCTCATGGT...AAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGGTGAAGCACCCACCATaGGCTCGCATTGATGCTATT +
Preference number: 2 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVVKHPP*ARIDAI
Trigger: AATAGCATCAATGCGAGCTCATGGTGGGTGCTTCAC...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR GCA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTGAGAAGACACTTGTCTaGATAGTATCACAGCAGCGA +
Preference number: 2 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLAEKTLV*IVSQQR
Trigger: TCGCTGCTGTGATACTATGCAGACAAGTGTCTTCTC...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp CCGGAAGCGTCTGGGACGACGACGGGAGAAAGGCATCACCTGGGGTTGCAGGAGATAGGTATCTGCCATTaGTTGCCAAAAACCATGTTG +
Preference number: 2 (lower is better)
Translates to: PEASGTTTGERHHLGLQEIGICH*LPKTML
Trigger: CAACATGGTTTTTGGCAACCAATGGCAGATACCTAT...CTCCTGCAACCCCAGGTGATGCCTTTCTCCCGTCGTCGTCCCAGACGCTTCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCGCCAGGCTTGCTGGGTaGCAGGAAAGAGACCTGGCT +
Preference number: 2 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPARLAG*QERDLA
Trigger: AGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGC...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 90 bp ATCTGGAAATCCTTGAACGACTCCTTCCCCATTTTCTGCCTGGGCTaGTCACTCTGTGGACTTGACCTGGCAGAGTCATTCGTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: IWKSLNDSFPIFCLG*SLCGLDLAESFVPG
Trigger: CCCAGGCACGAATGACTCTGCCAGGTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAATGGGGAAGGAGTCGTTCAAGGATTTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR GCA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGGCTGCCATAGGTATCTaGCATTGGTTGCCAAAAACC +
Preference number: 2 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVAAIGI*HWLPKT
Trigger: GGTTTTTGGCAACCAATGGCAGATACCTATGGCAGC...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp ATCTGCACTCCCCGGAAGCGTCTGGGACGACGACGGGAGAAAGGCATCACCTGGTTATATCAGGAGGGGTaGACATGTCTCCAAAAAGTT +
Preference number: 2 (lower is better)
Translates to: ICTPRKRLGRRREKGITWLYQEG*TCLQKV
Trigger: AACTTTTTGGAGACATGTCCACCCCTCCTGATATAA...CCAGGTGATGCCTTTCTCCCGTCGTCGTCCCAGACGCTTCCGGGGAGTGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 90 bp TTCCCAGAAACACACCTGGCAAGTGAGCCCGGTCCATCATGCCCATaGCACCTTACGCTCCATCTGCTACCTTCTCTACAGTGTAATGGT +
Preference number: 2 (lower is better)
Translates to: FPETHLASEPGPSCP*HLTLHLLPSLQCNG
Trigger: ACCATTACACTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTGTTTCTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTGGCAGGAAAGAGACCTaGCTGGCCCCATGCGATGGG +
Preference number: 2 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSGRKET*LAPCDG
Trigger: CCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCC...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCGGTACGGGTGGAGGCTaGACCATCTGGAAATCCTTG +
Preference number: 2 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPGTGGG*TIWKSL
Trigger: CAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACC...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 90 bp CACAAAGGATCCCTTGCTTTGGCCTCAAACGAGTCAGTGCCAACCTaGTCACAATTCTCTGATGCCTGCCACTCCCAATCTGTGGTCTCT +
Preference number: 2 (lower is better)
Translates to: HKGSLALASNESVPT*SQFSDACHSQSVVS
Trigger: AGAGACCACAGATTGGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR TCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCGAGCGGGGAGGTGAGTaGCTTTCCAAATCCGAAGGT +
Preference number: 2 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPERGGE*LSKSEG
Trigger: ACCTTCGGATTTGGAAAGTCACTCACCTCCCCGCTC...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR TCA 90 bp ATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCGACTTTGTTGAAGCATAGCGACATAACCTaGGGGTACAGCAGCAGTGCC +
Preference number: 2 (lower is better)
Translates to: MSKSSQSSVSCATPTLLKHSDIT*GYSSSA
Trigger: GGCACTGCTGCTGTACCCTCAGGTTATGTCGCTATG...CTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp ACTTTTGCTGGGACTTTCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCTCTGTGGACTTGACCTaGCAGAGTCATTCGTGCCTG +
Preference number: 2 (lower is better)
Translates to: TFAGTFKAFFEDVICGRVSVDLT*QSHSCL
Trigger: CAGGCACGAATGACTCTGCCAGGTCAAGTCCACAGA...GACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGAAAGTCCCAGCAAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCTTTACCACAGTGCCTaGCACACAGGAGCCATTCAA +
Preference number: 2 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPLYHSA*HTGAIQ
Trigger: TTGAATGGCTCCTGTGTGTCAGGCACTGTGGTAAAG...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTGGCTGGGGTTGGAGGTaGGTTGGTAGATGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSGWGWR*VGRWCG
Trigger: ACCACACCATCTACCAACTCACCTCCAACCCCAGCC...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR GCA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGTCTGAGGAAACCGGATaGATTTTCCATCTTTCTCAT +
Preference number: 2 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVSEETG*IFHLSH
Trigger: ATGAGAAAGATGGAAAATGCATCCGGTTTCCTCAGA...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR GCA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCTCCTTCCCCATTTTCTaGCTGGGCTTGTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPSFPIF*LGLSLC
Trigger: ACAGAGTGACAAGCCCAGGCAGAAAATGGGGAAGGA...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTCGCATAGAGAGGCTCTaGCTCCCAGACCTGCGCTAT +
Preference number: 2 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSRIERL*LPDLRY
Trigger: ATAGCGCAGGTCTGGGAGCCAGAGCCTCTCTATGCG...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAAGGATCCCTTGCTTTaGCCTCAAACGAGTCAGTGC +
Preference number: 2 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFKDPLL*PQTSQC
Trigger: GCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTT...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTGAGAAAGGCATCACCTaGGGTTGCAGGAGTAGGGGG +
Preference number: 2 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSEKGIT*GCRSRG
Trigger: CCCCCTACTCCTGCAACCCCAGGTGATGCCTTTCTC...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp GTGGACATGTCTCCAAAAAGTTCTAATTGGGTCACAGCCATGGAAGGAGACCTGGTGAAGCACCCACCATaGGCTCGCATTGATGCTATT +
Preference number: 2 (lower is better)
Translates to: VDMSPKSSNWVTAMEGDLVKHPP*ARIDAI
Trigger: AATAGCATCAATGCGAGCTCATGGTGGGTGCTTCAC...CAGGTCTCCTTCCATGGCTGTGACCCAATTAGAACTTTTTGGAGACATGTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR GCA 90 bp TTTTGCTGGGACTTTCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCACGCTGCCATAGGTATCTaGCATTGGTTGCCAAAAACC +
Preference number: 2 (lower is better)
Translates to: FCWDFQSLLRRCHLRSGHAAIGI*HWLPKT
Trigger: GGTTTTTGGCAACCAATGGCAGATACCTATGGCAGC...GTGACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGAAAGTCCCAGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp GCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCTTCAGGTGGTTTCACTaGGCGACTGTGAGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: ALASNESVPTLSQFSDACFRWFH*ATVSFS
Trigger: AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAA...GCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR TCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCACCATGAGCTCGCATTaGTGCTATTTCTTAGGTCTG +
Preference number: 2 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFTMSSH*CYFLGL
Trigger: CAGACCTAAGAAATAGCATCAATGCGAGCTCATGGT...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR TCA 90 bp ATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCGACTTTGTTGAAGTTCACTGGGCGACTGTaGGTTTTTCTGTGGGATGAA +
Preference number: 2 (lower is better)
Translates to: MSKSSQSSVSCATPTLLKFTGRL*VFLWDE
Trigger: TTCATCCCACAGAAAAACTCACAGTCGCCCAGTGAA...CTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp AGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCAAGAGGCTGGCAACCCTaGCCTTCAGAAATCATCTTA +
Preference number: 2 (lower is better)
Translates to: RGLKQGYEEGSGFLDLPSRGWQP*PSEIIL
Trigger: TAAGATGATTTCTGAAGGCCAGGGTTGCCAGCCTCT...TGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
3UTR-3UTR CCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTACGCATAGAGAGGCTCTaGCTCCCAGACCTGCGCTAT +
Preference number: 2 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLRIERL*LPDLRY
Trigger: ATAGCGCAGGTCTGGGAGCCAGAGCCTCTCTATGCG...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp TATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAGGGCAATTTGTGGCCACAGTCCCATGATTTATaGACGAGTATGTGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: YLANTSEKQDCFQGNLWPQSHDL*TSMWER
Trigger: CCGCTCCCACATACTCGTCCATAAATCATGGGACTG...TGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR GCA 90 bp CGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGTTCTTCTGCAGGTTCTaGGTTCAACAGAATCCTCAA +
Preference number: 2 (lower is better)
Translates to: RRRKWISRSPITAAGFLVFFCRF*VQQNPQ
Trigger: TTGAGGATTCTGTTGAACGCAGAACCTGCAGAAGAA...CACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
3UTR-3UTR GCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTCTGTCTTTACCACAGTaGCTGACACACAGGAGCCAT +
Preference number: 2 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSLSLPQ*LTHRSH
Trigger: ATGGCTCCTGTGTGTCAGGCACTGTGGTAAAGACAG...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp ACAGGGGTCAAGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTTCAGGTGGTTTCACTaGGCGACTGTGAGTTTTTCT +
Preference number: 2 (lower is better)
Translates to: TGVKFSWEMSKSSQSSVSFRWFH*ATVSFS
Trigger: AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAA...GGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACTTGACCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR TCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCTGGGATGAAGTGAGGTaGGAGCCCAAGAGAGCCTGT +
Preference number: 2 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCWDEVR*EPKRAC
Trigger: ACAGGCTCTCTTGGGCTCTCACCTCACTTCATCCCA...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR GCA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACGTATCTGCCATTGGTTaGCAAAAACCATGTTGTTCC +
Preference number: 2 (lower is better)
Translates to: KLIPTATAYLANTSEKQDVSAIG*QKPCCS
Trigger: GGAACAACATGGTTTTTGGCAACCAATGGCAGATAC...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR TCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTATTCACTGGGCGACTGTaGGTTTTTCTGTGGGATGAA +
Preference number: 2 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLFTGRL*VFLWDE
Trigger: TTCATCCCACAGAAAAACTCACAGTCGCCCAGTGAA...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCGCCACTCCCAATCTGTaGTCTCTACAGTGGTCAACA +
Preference number: 2 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCATPNL*SLQWST
Trigger: TGTTGACCACTGTAGAGACCACAGATTGGGAGTGGC...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp TGGTGTGGTAGAAGTCACAGGGGTCAAGTTCAGTTGGGAGATGTCAAAGTCATCTGCTTGATGGGTAGATaGATAAATTCCTCAAGAATG +
Preference number: 2 (lower is better)
Translates to: WCGRSHRGQVQLGDVKVICLMGR*INSSRM
Trigger: CATTCTTGAGGAATTTATCCATCTACCCATCAAGCA...GATGACTTTGACATCTCCCAACTGAACTTGACCCCTGTGACTTCTACCACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CCA 90 bp ACATTACATGATGGGGTTTCTGTAGACACTGGGATGGATACGAGTTATCAAAAAATACGGATGACACTGTaGTCACAAAGGATCCCTTGC +
Preference number: 2 (lower is better)
Translates to: TLHDGVSVDTGMDTSYQKIRMTL*SQRIPC
Trigger: GCAAGGGATCCTTTGTGACCACAGTGTCATCCGTAT...TTTTTGATAACTCGTATCCATCCCAGTGTCTACAGAAACCCCATCATGTAATGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 90 bp AAGCCATCTTTCTTCACCATGACACAGGACAACTACAGAGTTGTTTaGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGC +
Preference number: 2 (lower is better)
Translates to: KPSFFTMTQDNYRVV*ATFLIIMNHQPRHC
Trigger: GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTGAAGAAAGATGGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 90 bp TTCACCATGACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTaGATCATAATGAATCACCAACCACGTCATTGCCTTGTGATTCAA +
Preference number: 2 (lower is better)
Translates to: FTMTQDNYRVVLATF*IIMNHQPRHCLVIQ
Trigger: TTGAATCACAAGGCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCATAGGTATCTGCCATTaGTTGCCAAAAACCATGTTG +
Preference number: 2 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCIGICH*LPKTML
Trigger: CAACATGGTTTTTGGCAACCAATGGCAGATACCTAT...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 90 bp ACATTAGCAGAATTGTACCAGAATTATTTGGCAAATGACTTTTCTTaGAAAATGGCGCATGGAGAAGACACTTGTCTGCATAGTATCACA +
Preference number: 2 (lower is better)
Translates to: TLAELYQNYLANDFS*KMAHGEDTCLHSIT
Trigger: TGTGATACTATGCAGACAAGTGTCTTCTCCATGCGCCATTTTCAAAGAAAAGTCATTTGCCAAATAATTCTGGTACAATTCTGCTAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp GGGAGACAGGATGGCAGACCAGGCCCCGTGGAGAGATaGCACGCACGCGCGCACGCACGTCGCCACAGCCAG +
Preference number: 3 (lower is better)
Translates to: GRQDGRPGPVER*HARAHARRHSQ
Trigger: CTGGCTGTGGCGACGTGCGTGCGCGCGTGCGTGGCATCTCTCCACGGGGCCTGGTCTGCCATCCTGTCTCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp GGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTaGGTGGCAGGAAAGAGACCTGGCTGGCCCCATGCG +
Preference number: 3 (lower is better)
Translates to: GGNCPATVGQAC*VAGKRPGWPHA
Trigger: CGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp AAGGACAGGGGAGACAGGATGGCAGACCAGGCCCCGTaGAGAGATGCCACGCACGCGCGCACGCACGTCGCC +
Preference number: 3 (lower is better)
Translates to: KDRGDRMADQAP*RDATHARTHVA
Trigger: GGCGACGTGCGTGCGCGCGTGCGTGGCATCTCTCCACGGGGCCTGGTCTGCCATCCTGTCTCCCCTGTCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp GAGACCTGGCTGGCCCCATGCGATGGGCTGAGCTCCTaGTATCACCTGAGCGACGGGTGGCTGAGCACCCAT +
Preference number: 3 (lower is better)
Translates to: ETWLAPCDGLSS*YHLSDGWLSTH
Trigger: ATGGGTGCTCAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp GGGTGGCAGGAAAGAGACCTGGCTGGCCCCATGCGATaGGCTGAGCTCCTGGTATCACCTGAGCGACGGGTG +
Preference number: 3 (lower is better)
Translates to: GWQERDLAGPMR*AELLVSPERRV
Trigger: CACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp CTGGTATCACCTGAGCGACGGGTGGCTGAGCACCCATaGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: LVSPERRVAEHP*RSAVEQGAAGP
Trigger: GGGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTGATACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp AGTGGGCCAGGCTTGCTGGGTGGCAGGAAAGAGACCTaGCTGGCCCCATGCGATGGGCTGAGCTCCTGGTAT +
Preference number: 3 (lower is better)
Translates to: SGPGLLGGRKET*LAPCDGLSSWY
Trigger: ATACCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp CTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTCACAGTGGGCCAGGCTaGCTGGGTGGCAGGAAAGAG +
Preference number: 3 (lower is better)
Translates to: LVRLPGGYGWRLDHLEILHSGPG*LGGRKE
Trigger: CTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTG...AAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp CAGGGAGGGCTGGTCAGGCTTCCGGGAGGGTACGGGTaGAGGCTGGACCATCTGGAAATCCTTGAACGACTC +
Preference number: 3 (lower is better)
Translates to: QGGLVRLPGGYG*RLDHLEILERL
Trigger: GAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp GAGGTACAGGTCAGGGAGGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCATTTTCTGCCTGGGCTaGTCACTCTGTGGACTTGAC +
Preference number: 3 (lower is better)
Translates to: EVQVREGWSGFREGTGGGIFCLG*SLCGLD
Trigger: GTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAAT...GCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCCTCCCTGACCTGTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAAGGTATCTGCCATTGGTaGCCAAAAACCATGTTGTTC +
Preference number: 3 (lower is better)
Translates to: GWRELPGHSGPGLLGGRKGICHW*PKTMLF
Trigger: GAACAACATGGTTTTTGGCAACCAATGGCAGATACC...TTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp CTCAAACAGGACAAAGAAAGGACAGGGGAGACAGGATaGCAGACCAGGCCCCGTGGAGAGATGCCACGCACG +
Preference number: 3 (lower is better)
Translates to: LKQDKERTGETG*QTRPRGEMPRT
Trigger: CGTGCGTGGCATCTCTCCACGGGGCCTGGTCTGCCATCCTGTCTCCCCTGTCCTTTCTTTGTCCTGTTTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp GATGGGCTGAGCTCCTGGTATCACCTGAGCGACGGGTaGCTGAGCACCCATGGCGATCTGCTGTTGAACAAG +
Preference number: 3 (lower is better)
Translates to: DGLSSWYHLSDG*LSTHGDLLLNK
Trigger: CTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp GACATAGAGCCAAACACATCTGCACTCCCCGGAAGCGTCTGGGACGACGACGGGGCCCAAGAGAGCCTGTaGTACTGCAGATTCCCATGC +
Preference number: 3 (lower is better)
Translates to: DIEPNTSALPGSVWDDDGAQESL*YCRFPC
Trigger: GCATGGGAATCTGCAGTACAACAGGCTCTCTTGGGC...CCCGTCGTCGTCCCAGACGCTTCCGGGGAGTGCAGATGTGTTTGGCTCTATGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp GAAGGATGGGAGGACGGCGCCCATAGCGACATAACCTaGGGGTACAGCAGCAGTGCCGAAAGACATAGAGCC +
Preference number: 3 (lower is better)
Translates to: EGWEDGAHSDIT*GYSSSAERHRA
Trigger: GGCTCTATGTCTTTCGGCACTGCTGCTGTACCCTCAGGTTATGTCGCTATGGGCGCCGTCCTCCCATCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp CCCCATTTTCTGCCTGGGCTTGTCACTCTGTGGACTTaGCCTGGCAGAGTCATTCGTGCCTGGGACGGTTGC +
Preference number: 3 (lower is better)
Translates to: PHFLPGLVTLWT*PGRVIRAWDGC
Trigger: GCAACCGTCCCAGGCACGAATGACTCTGCCAGGTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp CACCCCGACTTTGTTGAAGTAACTGGAGAAGGCCTCTaGGGTACAGGTCAGGGAGGGCTGGTCAGGCTTCCG +
Preference number: 3 (lower is better)
Translates to: HPDFVEVTGEGL*GTGQGGLVRLP
Trigger: CGGAAGCCTGACCAGCCCTCCCTGACCTGTACCTCAGAGGCCTTCTCCAGTTACTTCAACAAAGTCGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp ATAGAGCCAAACACATCTGCACTCCCCGGAAGCGTCTaGGACGACGACGGGAGAAAGGCATCACCTGGGGTT +
Preference number: 3 (lower is better)
Translates to: IEPNTSALPGSV*DDDGRKASPGV
Trigger: AACCCCAGGTGATGCCTTTCTCCCGTCGTCGTCCCAGACGCTTCCGGGGAGTGCAGATGTGTTTGGCTCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp CACTGGGCTCACCACTGGGCTCCCCAAATGGATCACTaGTGGAGGAGGCCTGTGATCCATCAGGTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: HWAHHWAPQMDH*WRRPVIHQVLL
Trigger: AAGAAGCACCTGATGGATCACAGGCCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp TTTTCTGCCTGGGCTTGTCACTCTGTGGACTTGACCTaGCAGAGTCATTCGTGCCTGGGACGGTTGCAAGGG +
Preference number: 3 (lower is better)
Translates to: FSAWACHSVDLT*QSHSCLGRLQG
Trigger: CCCTTGCAACCGTCCCAGGCACGAATGACTCTGCCAGGTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp TGGGCTCACCACTGGGCTCCCCAAATGGATCACTGGTaGAGGAGGCCTGTGATCCATCAGGTGCTTCTTGTT +
Preference number: 3 (lower is better)
Translates to: WAHHWAPQMDHW*RRPVIHQVLLV
Trigger: AACAAGAAGCACCTGATGGATCACAGGCCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp CTTCCTACCAGTCTTCCCAGAAACACACCTGGCAAGTaGGCCCGGTCCATCATGCCCATTGCACCTTACGCT +
Preference number: 3 (lower is better)
Translates to: LPTSLPRNTPGK*ARSIMPIAPYA
Trigger: AGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTGTTTCTGGGAAGACTGGTAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp CACACCTGGCAAGTGAGCCCGGTCCATCATGCCCATTaGACCTTACGCTCCATCTGCTACCTTCTCTACAGT +
Preference number: 3 (lower is better)
Translates to: HTWQVSPVHHAH*TLRSICYLLYS
Trigger: ACTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp CCAGAAACACACCTGGCAAGTGAGCCCGGTCCATCATaGCCATTGCACCTTACGCTCCATCTGCTACCTTCT +
Preference number: 3 (lower is better)
Translates to: PETHLASEPGPS*PLHLTLHLLPS
Trigger: AGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTGTTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp GGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTaGATTTCTAGATCTCCCATCACGGCTGCTGGCTTC +
Preference number: 3 (lower is better)
Translates to: GEGSEARVRRRK*ISRSPITAAGF
Trigger: GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
3UTR-3UTR CAA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGGAGTCAGTGCCAACCTaGTCACAATTCTCTGATGCC +
Preference number: 3 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVESVPT*SQFSDA
Trigger: GGCATCAGAGAATTGTGACAAGGTTGGCACTGACTC...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp ACGTCGCCACAGCCAGAAGGCATACGGATGACACTGTaGTCACAAAGGATCCCTTGCTTTGGCCTCAAACGA +
Preference number: 3 (lower is better)
Translates to: TSPQPEGIRMTL*SQRIPCFGLKR
Trigger: TCGTTTGAGGCCAAAGCAAGGGATCCTTTGTGACCACAGTGTCATCCGTATGCCTTCTGGCTGTGGCGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp CTTGTGGACTTATATTATCACCACTGGGCTCACCACTaGGCTCCCCAAATGGATCACTGGTGGAGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: LVDLYYHHWAHH*APQMDHWWRRP
Trigger: AGGCCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp TGGCTCCCAGACCTGCGCTATCTAGCTACCGTCTTGTaGACTTATATTATCACCACTGGGCTCACCACTGGG +
Preference number: 3 (lower is better)
Translates to: WLPDLRYLATVL*TYIITTGLTTG
Trigger: CCCAGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAGACGGTAGCTAGATAGCGCAGGTCTGGGAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp AGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCACTaGCGTGGGATGCTGATGATTTGGATGGAGAGCTCT +
Preference number: 3 (lower is better)
Translates to: SLLRRCHLRSGH*RGMLMIWMESS
Trigger: AGAGCTCTCCATCCAAATCATCAGCATCCCACGTCAGTGACCCGACCGCAGATGACATCTTCGAAGAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp GGGCTCCCCAAATGGATCACTGGTGGAGGAGGCCTGTaGTCCATCAGGTGCTTCTTGTTCTTCACTTTTGCT +
Preference number: 3 (lower is better)
Translates to: GLPKWITGGGGL*SIRCFLFFTFA
Trigger: AGCAAAAGTGAAGAACAAGAAGCACCTGATGGATCACAGGCCTCCTCCACCAGTGATCCATTTGGGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 72 bp GGCTGCTGGCTTCTTAGTGTGGAAAAATTCTCTCCCTaGAGAGGCTGGCAACCCTGGCCTTCAGAAATCATC +
Preference number: 3 (lower is better)
Translates to: GCWLLSVEKFSP*RGWQPWPSEII
Trigger: GATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAGCCAGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
3UTR GCA 72 bp GGCATACGGATGACACTGTGGTCACAAAGGATCCCTTaGTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTC +
Preference number: 3 (lower is better)
Translates to: GIRMTLWSQRIP*FGLKRVSANLV
Trigger: GACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTTTGTGACCACAGTGTCATCCGTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp TCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGTaGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCT +
Preference number: 3 (lower is better)
Translates to: SRSPITAAGFLV*KNSLPAEAGNP
Trigger: AGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
3UTR CCA 72 bp TCTTCGAAGATGTCATCTGCGGTCGGGTCACTGACGTaGGATGCTGATGATTTGGATGGAGAGCTCTGCCTA +
Preference number: 3 (lower is better)
Translates to: SSKMSSAVGSLT*DADDLDGELCL
Trigger: TAGGCAGAGCTCTCCATCCAAATCATCAGCATCCCACGTCAGTGACCCGACCGCAGATGACATCTTCGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp GAGAGCCTGTTGTACTGCAGATTCCCATGCCATCCGTaGAGCACCCACCATGAGCTCGCATTGATGCTATTT +
Preference number: 3 (lower is better)
Translates to: ESLLYCRFPCHP*STHHELALMLF
Trigger: AAATAGCATCAATGCGAGCTCATGGTGGGTGCTTCACGGATGGCATGGGAATCTGCAGTACAACAGGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
3UTR GCA 72 bp GAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTaGCACTCCCAATCTGTGGTCTCTACAGTGGTCAAC +
Preference number: 3 (lower is better)
Translates to: ESVPTLSQFSDA*HSQSVVSTVVN
Trigger: GTTGACCACTGTAGAGACCACAGATTGGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp ATCAGAGTTCACTTCGCATCATGGTACCCCAAGGGATaGGGATACGGGTATGACACTGATGGAGAGACTCAG +
Preference number: 3 (lower is better)
Translates to: IRVHFASWYPKG*GYGYDTDGETQ
Trigger: CTGAGTCTCTCCATCAGTGTCATACCCGTATCCCCATCCCTTGGGGTACCATGATGCGAAGTGAACTCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp TCTAGCTACCGTCTTGTGGACTTATATTATCACCACTaGGCTCACCACTGGGCTCCCCAAATGGATCACTGG +
Preference number: 3 (lower is better)
Translates to: SSYRLVDLYYHH*AHHWAPQMDHW
Trigger: CCAGTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAGACGGTAGCTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR GCA 72 bp ACAAAGGATCCCTTGCTTTGGCCTCAAACGAGTCAGTaGCAACCTTGTCACAATTCTCTGATGCCTGCCACT +
Preference number: 3 (lower is better)
Translates to: TKDPLLWPQTSQ*QPCHNSLMPAT
Trigger: AGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp GGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTaGCACCCCGACTTTGTTGAAGTAACTGGAGAAGGC +
Preference number: 3 (lower is better)
Translates to: GDVKVITVVCIL*HPDFVEVTGEG
Trigger: GCCTTCTCCAGTTACTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp ACGGATGACACTGTGGTCACAAAGGATCCCTTGCTTTaGCCTCAAACGAGTCAGTGCCAACCTTGTCACAAT +
Preference number: 3 (lower is better)
Translates to: TDDTVVTKDPLL*PQTSQCQPCHN
Trigger: ATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTTTGTGACCACAGTGTCATCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp TCCACAAGAGGGTCACCTCATCATAGCACAGACACATaGTCTGGAGGAATCCTGTACAAACAGGTAGCAGCT +
Preference number: 3 (lower is better)
Translates to: STRGSPHHSTDT*SGGILYKQVAA
Trigger: AGCTGCTACCTGTTTGTACAGGATTCCTCCAGACCATGTGTCTGTGCTATGATGAGGTGACCCTCTTGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp GCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCAGCTCAAGGTATTTGTaGGTTAAGCGTTGGCTTGAC +
Preference number: 3 (lower is better)
Translates to: ALASNESVPTLSQFSDACSSRYL*VKRWLD
Trigger: GTCAAGCCAACGCTTAACCAACAAATACCTTGAGCT...GCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCACCATCTGGAAATCCTaGAACGACTCCTTCCCCATT +
Preference number: 3 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPTIWKS*NDSFPI
Trigger: AATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGGT...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CCA 72 bp GATGGTGTGGTAGAAGTCACAGGGGTCAAGTTCAGTTaGGAGATGTCAAAGTCATCACAGTCGTCTGTATCC +
Preference number: 3 (lower is better)
Translates to: DGVVEVTGVKFS*EMSKSSQSSVS
Trigger: GGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACTTGACCCCTGTGACTTCTACCACACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp TGGTGTGGTAGAAGTCACAGGGGTCAAGTTCAGTTGGGAGATGTCAAAGTCATCCACCATGAGCTCGCATaGATGCTATTTCTTAGGTCT +
Preference number: 3 (lower is better)
Translates to: WCGRSHRGQVQLGDVKVIHHELA*MLFLRS
Trigger: AGACCTAAGAAATAGCATCAATGCGAGCTCATGGTG...GATGACTTTGACATCTCCCAACTGAACTTGACCCCTGTGACTTCTACCACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACGGTATCTGCCATTGGTaGCCAAAAACCATGTTGTTC +
Preference number: 3 (lower is better)
Translates to: KLIPTATAYLANTSEKQDGICHW*PKTMLF
Trigger: GAACAACATGGTTTTTGGCAACCAATGGCAGATACC...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 72 bp GATTTATGGACGAGTATGTGGGAGCGGGGAGGTGAGTaGCTTTCCAAATCCGAAGGTCAAATCTTTCATGAG +
Preference number: 3 (lower is better)
Translates to: DLWTSMWERGGE*LSKSEGQIFHE
Trigger: CTCATGAAAGATTTGACCTTCGGATTTGGAAAGTCACTCACCTCCCCGCTCCCACATACTCGTCCATAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp ACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTaGTTTCAGGGCAATTTGTGGCCATTATACCTCCCA +
Preference number: 3 (lower is better)
Translates to: TAYLANTSEKQD*FQGNLWPLYLP
Trigger: TGGGAGGTATAATGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp TGTCACAATTCTCTGATGCCTGCCACTCCCAATCTGTaGTCTCTACAGTGGTCAACAGGTAGCAAAAGCAAA +
Preference number: 3 (lower is better)
Translates to: CHNSLMPATPNL*SLQWSTGSKSK
Trigger: TTTGCTTTTGCTACCTGTTGACCACTGTAGAGACCACAGATTGGGAGTGGCAGGCATCAGAGAATTGTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp CTCCCCATGCTCTTTTGGTATTGGTCACCATATTCCTaGGATAGAGGGACAGTGGTTCTGAACTTACCCAAT +
Preference number: 3 (lower is better)
Translates to: LPMLFWYWSPYS*DRGTVVLNLPN
Trigger: ATTGGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCAAAAGAGCATGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp TATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAGGGCAATTTGTGGCCACACCATGAGCTCGCATaGATGCTATTTCTTAGGTCT +
Preference number: 3 (lower is better)
Translates to: YLANTSEKQDCFQGNLWPHHELA*MLFLRS
Trigger: AGACCTAAGAAATAGCATCAATGCGAGCTCATGGTG...TGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp ACAGGGGTCAAGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCCATAGGTATCTGCCATaGGTTGCCAAAAACCATGTT +
Preference number: 3 (lower is better)
Translates to: TGVKFSWEMSKSSQSSVSHRYLP*VAKNHV
Trigger: AACATGGTTTTTGGCAACCAATGGCAGATACCTATG...GGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACTTGACCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR-3UTR CAA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTAGGGGTCAAGTTCAGTaGGGAGATGTCAAAGTCATC +
Preference number: 3 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSRGQVQ*GDVKVI
Trigger: GATGACTTTGACATCTCCCAACTGAACTTGACCCCT...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR TCA 72 bp TTCCTTAAGTTCAGATCCAGTTACTGTCATGTTCAGTaGATTATGGCAATTGGCTGGGCTGTCACCACCCAC +
Preference number: 3 (lower is better)
Translates to: FLKFRSSYCHVQ*IMAIGWAVTTH
Trigger: GTGGGTGGTGACAGCCCAGCCAATTGCCATAATTCACTGAACATGACAGTAACTGGATCTGAACTTAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp AACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTGCCCAAGAGAGCCTGTaGTACTGCAGATTCCCATGC +
Preference number: 3 (lower is better)
Translates to: NYRVVLATFLIIMNHQPRAQESL*YCRFPC
Trigger: GCATGGGAATCTGCAGTACAACAGGCTCTCTTGGGC...ACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCGCAAATGACTTTTCTTaGAAAATGGCGCATGGAGAA +
Preference number: 3 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPANDFS*KMAHGE
Trigger: TTCTCCATGCGCCATTTTCAAAGAAAAGTCATTTGC...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 72 bp ACCACCCACTTTAAAGCTAACTGCAGTTGGTACACCTaGAAACAGCATCAGAGTTCACTTCGCATCATGGTA +
Preference number: 3 (lower is better)
Translates to: TTHFKANCSWYT*KQHQSSLRIMV
Trigger: TACCATGATGCGAAGTGAACTCTGATGCTGTTTTCAGGTGTACCAACTGCAGTTAGCTTTAAAGTGGGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 72 bp TTAGTGCTAAGAGGAGGAGGAAGCAAGCATTGCACATaGGAATCTTCCTACCTATCTAAGCAGAACTGTGCA +
Preference number: 3 (lower is better)
Translates to: LVLRGGGSKHCT*ESSYLSKQNCA
Trigger: TGCACAGTTCTGCTTAGATAGGTAGGAAGATTCTCATGTGCAATGCTTGCTTCCTCCTCCTCTTAGCACTAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp CCGGTCCATCATGCCCATTGCACCTTACGCTCCATCTaGTACCTTCTCTACAGTGTAATGGTATTATTAAAA +
Preference number: 3 (lower is better)
Translates to: PVHHAHCTLRSI*YLLYSVMVLLK
Trigger: TTTTAATAATACCATTACACTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CCA 72 bp CTTCTTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTaGCAACCCTGGCCTTCAGAAATCATCTTAATTCTT +
Preference number: 3 (lower is better)
Translates to: LLSVEKFSPCRG*QPWPSEIILIL
Trigger: AAGAATTAAGATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
3UTR CCA 72 bp AGTTCAGATCCAGTTACTGTCATGTTCAGTGAATTATaGCAATTGGCTGGGCTGTCACCACCCACTTTAAAG +
Preference number: 3 (lower is better)
Translates to: SSDPVTVMFSEL*QLAGLSPPTLK
Trigger: CTTTAAAGTGGGTGGTGACAGCCCAGCCAATTGCCATAATTCACTGAACATGACAGTAACTGGATCTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 72 bp ATGAAGGTTCTAGCCAAAAGCCATCTTTCTTCACCATaGCACAGGACAACTACAGAGTTGTTTTGGCAACAT +
Preference number: 3 (lower is better)
Translates to: MKVLAKSHLSSP*HRTTTELFWQH
Trigger: ATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTGAAGAAAGATGGCTTTTGGCTAGAACCTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp ACATTACATGATGGGGTTTCTGTAGACACTGGGATGGATACGAGTTATCAAAAAGAGAGCTCAAGGTATTaGTTGGTTAAGCGTTGGCTT +
Preference number: 3 (lower is better)
Translates to: TLHDGVSVDTGMDTSYQKESSRY*LVKRWL
Trigger: AAGCCAACGCTTAACCAACAAATACCTTGAGCTCTC...TTTTTGATAACTCGTATCCATCCCAGTGTCTACAGAAACCCCATCATGTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR-3UTR CAA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCTTGCCAAAAACCATGTaGTTCCTTCTTCAGGTGGTT +
Preference number: 3 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCLPKTM*FLLQVV
Trigger: AACCACCTGAAGAAGGAACAACATGGTTTTTGGCAA...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 72 bp ACCGGCCAATTTCAATCAGTCATCTCAAGGTTAGTTTaGCTTTTCAATACTCCCAGATCCAATCACATGATT +
Preference number: 3 (lower is better)
Translates to: TGQFQSVISRLV*LFNTPRSNHMI
Trigger: AATCATGTGATTGGATCTGGGAGTATTGAAAAGTCAAACTAACCTTGAGATGACTGATTGAAATTGGCCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR TCA 72 bp TCTGCCAATGGAAATATAGATGGCAGTTTAAAATCTTaGCTTGATCGCCCTCATTTTAATGTGTCATCTAGG +
Preference number: 3 (lower is better)
Translates to: SANGNIDGSLKS*LDRPHFNVSSR
Trigger: CCTAGATGACACATTAAAATGAGGGCGATCAAGTCAAGATTTTAAACTGCCATCTATATTTCCATTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR GCA 72 bp ACATTCTTGATCATAATGAATCACCAACCACGTCATTaGCTTGTGATTCAAGTTAATTCACTTCATAAGAGG +
Preference number: 3 (lower is better)
Translates to: TFLIIMNHQPRH*LVIQVNSLHKR
Trigger: CCTCTTATGAAGTGAATTAACTTGAATCACAAGGCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGT
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTaGCTGGGTGGCAGGAAAGAGACCTGGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GWRELPGHSGPG*LGGRKETWLAP
Trigger: TGGGGCCAGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR GCA 90 bp GACGGGTGGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCCTTGTCTCCCCGAGCTaGGGACACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: DGWLSTHGDLLLNKGLLALVSPS*GHFINP
Trigger: GGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAG...GGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTGATGGGCTGAGCTCCTaGTATCACCTGAGCGACGGG +
Preference number: 4 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLADGLSS*YHLSDG
Trigger: CCCGTCGCTCAGGTGATACCAGGAGCTCAGCCCATC...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR GCA 90 bp CGGGTGGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCCCTCAAAGTGGCTTCGCTaGGATCCTGACCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVAEHPWRSAVEQGAAGPSKWLR*DPDLSS
Trigger: GGAAGAAAGGTCAGGATCGCAGCGAAGCCACTTTGA...GGGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR GCA 90 bp GACGGGTGGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCTGCCTCTGCTCTCTCTaGTGCTGGGCTTTGAACAAG +
Preference number: 4 (lower is better)
Translates to: DGWLSTHGDLLLNKGLLACLCSL*CWALNK
Trigger: CTTGTTCAAAGCCCAGCAGCAGAGAGAGCAGAGGCA...GGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR GCA 90 bp CTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTTCGAGACTCTGCCTCTaGTCTCTCTGCTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LVRLPGGYGWRLDHLEILSRLCL*SLCCWA
Trigger: AGCCCAGCAGCAGAGAGAGCAGAGGCAGAGTCTCGA...AAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR GCA 90 bp CGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTGAACGACTCCTTCGCCGGTTCGAGACTCTaGCTCTGCTCTCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: REGTGGGWTIWKSLNDSFAGSRL*LCSLCC
Trigger: GCAGCAGAGAGAGCAGAGGCAGAGTCTCGAACCGGC...GAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp AAGGGATGGGGATACGGGTATGACACTGATGGAGAGACTCAGATAGCCACACTGGGGCATGAAGGCGGCTaGCGGGAACTGCCCGGCCAC +
Preference number: 4 (lower is better)
Translates to: KGWGYGYDTDGETQIATLGHEGG*RELPGH
Trigger: GTGGCCGGGCAGTTCCCGCCAGCCGCCTTCATGCCC...CAGTGTGGCTATCTGAGTCTCTCCATCAGTGTCATACCCGTATCCCCATCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGCCGGGAGGGTACGGGTaGAGGCTGGACCATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVPGGYG*RLDHLE
Trigger: TTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGG...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAAGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: GWRELPGHSGPGLLGGRKVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...TTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGACTGGAGAAGGCCTCTaGGGTACAGGTCAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVTGEGL*GTGQGG
Trigger: CCCTCCCTGACCTGTACCTCAGAGGCCTTCTCCAGT...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp CCGGAAGCGTCTGGGACGACGACGGGAGAAAGGCATCACCTGGGGTTGCAGGAGGTTTGTGTTCTCCCTTaGAACGTGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: PEASGTTTGERHHLGLQEVCVLP*NVRQQQ
Trigger: TTGTTGCTGGCGCACGTTCCAAGGGAGAACACAAAC...CTCCTGCAACCCCAGGTGATGCCTTTCTCCCGTCGTCGTCCCAGACGCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp TCCTTTCTCTTTCACTGGGTAGAGGGGGAAGACGCTCCAGAACAGCTGGCGGTGGCTGGCCCCATGCGATaGGCTGAGCTCCTGGTATCA +
Preference number: 4 (lower is better)
Translates to: SFLFHWVEGEDAPEQLAVAGPMR*AELLVS
Trigger: TGATACCAGGAGCTCAGCCCATCGCATGGGGCCAGC...CACCGCCAGCTGTTCTGGAGCGTCTTCCCCCTCTACCCAGTGAAAGAGAAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAATCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: GWRELPGHSGPGLLGGRKSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...TTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp GGCTGGCGGGAACTGCCCGGCCACAGTGGGCCAGGCTTGCTGGGTGGCAGGAAATGGGCTTTGAACAAGTaGACTTACAGGTTGACTTTT +
Preference number: 4 (lower is better)
Translates to: GWRELPGHSGPGLLGGRKWALNK*TYRLTF
Trigger: AAAAGTCAACCTGTAAGTTCACTTGTTCAAAGCCCA...TTTCCTGCCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGTTCCCGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp GGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCTCTGCTGCTGGGCTTTaGACAAGTGAACTTACAGGT +
Preference number: 4 (lower is better)
Translates to: GLVRLPGGYGWRLDHLEISAAGL*TSELTG
Trigger: ACCTGTAAGTTCACTTGTTCAAAGCCCAGCAGCAGA...GATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp CCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCCACTCCCCACCTGAGCGACGGGTaGCTGAGCACCCATGGCGAT +
Preference number: 4 (lower is better)
Translates to: PQTSQCQPCHNSLMPATPHLSDG*LSTHGD
Trigger: ATCGCCATGGGTGCTCAGCCACCCGTCGCTCAGGTG...GGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp CGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTGAACGACTCCTTCCCGCCTGGGCTGTTTTaGTGGCCACAAATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: REGTGGGWTIWKSLNDSFPPGLF*WPQICD
Trigger: ATCACAGATTTGTGGCCATCAAAACAGCCCAGGCGG...GAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp GGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCCTTCTTTTGGCTGGTaGGAACCTGGTAAATGTTCT +
Preference number: 4 (lower is better)
Translates to: GLVRLPGGYGWRLDHLEIPSFGW*EPGKCS
Trigger: AGAACATTTACCAGGTTCCCACCAGCCAAAAGAAGG...GATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp GGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTCCTTCTTTTGGCTaGTGGGAACCTGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: GLVRLPGGYGWRLDHLEILPSFG*WEPGKC
Trigger: ACATTTACCAGGTTCCCACCAGCCAAAAGAAGGAAG...GATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCACTGCCCGGCCACAGTaGGCCAGGCTTGCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPTARPQ*ARLAGW
Trigger: CCACCCAGCAAGCCTGGCCCACTGTGGCCGGGCAGT...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp TCCCCATTTTCTGCCTGGGCTTGTCACTCTGTGGACTaGACCTGGCAGAGTCATTCGTGCCTGGGACGGTTG +
Preference number: 4 (lower is better)
Translates to: SPFSAWACHSVD*TWQSHSCLGRL
Trigger: CAACCGTCCCAGGCACGAATGACTCTGCCAGGTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 72 bp GAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTaGAACGACTCCTTCCCCATTTTCTGCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EGTGGGWTIWKS*NDSFPIFCLGL
Trigger: CAAGCCCAGGCAGAAAATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp GACGGGTGGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: DGWLSTHGDLLLNKGLLAFIMES*HNLSPR
Trigger: TCGGGGAGACAAGTTATGTCAAGATTCCATGATGAA...GGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp GACGGGTGGCTGAGCACCCATGGCGATCTGCTGTTGAACAAGGGGCTGCTGGCCGCTTCAGCTCATAGATaGGTTGAAAGAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: DGWLSTHGDLLLNKGLLAASAHR*VERDLS
Trigger: TGAGAGATCTCTTTCAACTCATCTATGAGCTGAAGC...GGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCACCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 72 bp ACACACCTGGCAAGTGAGCCCGGTCCATCATGCCCATaGCACCTTACGCTCCATCTGCTACCTTCTCTACAG +
Preference number: 4 (lower is better)
Translates to: THLASEPGPSCP*HLTLHLLPSLQ
Trigger: CTGTAGAGAAGGTAGCAGATGGAGCGTAAGGTGCAATGGGCATGATGGACCGGGCTCACTTGCCAGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAGGGCAATTTGTGGCCACTGGCCCCAGAAGGATaGGAGGACGGCGCCCATAGC +
Preference number: 4 (lower is better)
Translates to: YLANTSEKQDCFQGNLWPLAPEG*EDGAHS
Trigger: GCTATGGGCGCCGTCCTCCCATCCTTCTGGGGCCAG...TGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AAGGGATGGGGATACGGGTATGACACTGATGGAGAGACTCAGATAGCCACACTGGGGGTGAGGGGACCTTaGAACATGGCGGCTGCTAAA +
Preference number: 4 (lower is better)
Translates to: KGWGYGYDTDGETQIATLGVRGP*NMAAAK
Trigger: TTTAGCAGCCGCCATGTTCCAAGGTCCCCTCACCCC...CAGTGTGGCTATCTGAGTCTCTCCATCAGTGTCATACCCGTATCCCCATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTTCTTCCAAAATGGTCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLASSKMV*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGACCATTTTGGAAGA...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCGCCAGGCTTGCTGGGTaGCAGGAAAGAGACCTGGCT +
Preference number: 4 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPARLAG*QERDLA
Trigger: AGCCAGGTCTCTTTCCTGCCACCCAGCAAGCCTGGC...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp TCCTTGAACGACTCCTTCCCCATTTTCTGCCTGGGCTaGTCACTCTGTGGACTTGACCTGGCAGAGTCATTC +
Preference number: 4 (lower is better)
Translates to: SLNDSFPIFCLG*SLCGLDLAESF
Trigger: GAATGACTCTGCCAGGTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAATGGGGAAGGAGTCGTTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 72 bp CTCTGGCTCCCAGACCTGCGCTATCTAGCTACCGTCTaGTGGACTTATATTATCACCACTGGGCTCACCACT +
Preference number: 4 (lower is better)
Translates to: LWLPDLRYLATV*WTYIITTGLTT
Trigger: AGTGGTGAGCCCAGTGGTGATAATATAAGTCCACAAGACGGTAGCTAGATAGCGCAGGTCTGGGAGCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp GGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTCCGCCTGGGCTGTTTTaGTGGCCACAAATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: GYEEGSGFLDLPSRLLASPPGLF*WPQICD
Trigger: ATCACAGATTTGTGGCCATCAAAACAGCCCAGGCGG...AGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp CTTTCCAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTTGTCTCCCCGAGCTaGGGACACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: LSRLGRGLKQGYEEGSGFLVSPS*GHFINP
Trigger: GGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAG...AAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTGGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp GGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTATGGCCACAAATCTGTaGTTCCCTTCCTTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: GYEEGSGFLDLPSRLLASMATNL*FPSFPQ
Trigger: TTGCGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...AGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp CGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGCCGCCTGGGCTGTTTTaGTGGCCACAAATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RRRKWISRSPITAAGFLVPPGLF*WPQICD
Trigger: ATCACAGATTTGTGGCCATCAAAACAGCCCAGGCGG...CACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp ATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCTTGTCTCCCCGAGCTaGGGACACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: IGEGSEARVRRRKWISRSLVSPS*GHFINP
Trigger: GGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAG...AGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp ACTTTCCAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTTCTCCCTTGGAACGTaGGCCAGCAACAACACCCTT +
Preference number: 4 (lower is better)
Translates to: TFQIGEGSEARVRRRKWIFSLGT*ASNNTL
Trigger: AAGGGTGTTGTTGCTGGCGCACGTTCCAAGGGAGAA...AATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTGGAAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp TTCCAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTGCCTTCACAGCTGCATaGAAAACCCTGACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: FQIGEGSEARVRRRKWISAFTAA*KTLTWF
Trigger: GAACCACGTCAGGGTTTTGCATGCAGCTGTGAAGGC...AGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS-3UTR GCA 90 bp GTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCATCAAGAGCCTTCACAGCTaGATGCAAAACCCTGACGTG +
Preference number: 4 (lower is better)
Translates to: VEKFSPCRGWQPWPSEIIKSLHS*MQNPDV
Trigger: CACGTCAGGGTTTTGCATGCAGCTGTGAAGGCTCTT...GATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS-3UTR GCA 90 bp GCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCTCAAAGTGGCTTCGCTaGGATCCTGACCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALASNESVPTLSQFSDACSKWLR*DPDLSS
Trigger: GGAAGAAAGGTCAGGATCGCAGCGAAGCCACTTTGA...GCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTCAATCCCAATCAGCTTaGCTTTGTACCGGACCCCTT +
Preference number: 4 (lower is better)
Translates to: GYEEGSGFLDLPSRLLASQSQSA*LCTGPL
Trigger: AAGGGGTCCGGTACAAAGCCAAGCTGATTGGGATTG...AGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp AAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGCCTGACCTTTCTTCCTaGAGTCTTTCTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KQGYEEGSGFLDLPSRLLPDLSS*SLSWRW
Trigger: CCAGCGCCAAGAAAGACTCCAGGAAGAAAGGTCAGG...CAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp TTTTGCTGGGACTTTCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCACCCTGACCTTTCTTCCTaGAGTCTTTCTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FCWDFQSLLRRCHLRSGHPDLSS*SLSWRW
Trigger: CCAGCGCCAAGAAAGACTCCAGGAAGAAAGGTCAGG...GTGACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGAAAGTCCCAGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCGTGGCTGAGCACCCATaGCGATCTGCTGTTGAACAA +
Preference number: 4 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFVAEHP*RSAVEQ
Trigger: TTGTTCAACAGCAGATCGCCATGGGTGCTCAGCCAC...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCGTGGGCCAGGCTTGCTaGGTGGCAGGAAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: ELALMLFLRSVDFRIERLVGQAC*VAGKRP
Trigger: AGGTCTCTTTCCTGCCACCCAGCAAGCCTGGCCCAC...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCGGTACGGGTGGAGGCTaGACCATCTGGAAATCCTTG +
Preference number: 4 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPGTGGG*TIWKSL
Trigger: CAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACC...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp CGGGAGGGTACGGGTGGAGGCTGGACCATCTGGAAATCCTTGAACGACTCCTTCTCAAACACAATGTACTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: REGTGGGWTIWKSLNDSFSNTMY*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGTACATTGTGTTTGA...GAAGGAGTCGTTCAAGGATTTCCAGATGGTCCAGCCTCCACCCGTACCCTCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
3UTR CAA 72 bp TCCCTTGCTTTGGCCTCAAACGAGTCAGTGCCAACCTaGTCACAATTCTCTGATGCCTGCCACTCCCAATCT +
Preference number: 4 (lower is better)
Translates to: SLALASNESVPT*SQFSDACHSQS
Trigger: AGATTGGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp AGGCATACGGATGACACTGTGGTCACAAAGGATCCCTaGCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGT +
Preference number: 4 (lower is better)
Translates to: RHTDDTVVTKDP*LWPQTSQCQPC
Trigger: ACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGCAAGGGATCCTTTGTGACCACAGTGTCATCCGTATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp CGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGATGGCCACAAATCTGTaGTTCCCTTCCTTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: RRRKWISRSPITAAGFLVMATNL*FPSFPQ
Trigger: TTGCGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...CACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp TATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAGGGCAATTTGTGGCCACTTGTCTCCCCGAGCTaGGGACACTTCATCAATCCC +
Preference number: 4 (lower is better)
Translates to: YLANTSEKQDCFQGNLWPLVSPS*GHFINP
Trigger: GGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAG...TGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCACCTCTTTATCAAAGTaGCTTCGCTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: RVRRRKWISRSPITAAGFTSLSK*LRCDPD
Trigger: GTCAGGATCGCAGCGAAGCCACTTTGATAAAGAGGT...GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp TGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCATGTTTGTGTTCTCCCTTaGAACGTGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: CGKILSLQRLATLAFRNHVCVLP*NVRQQQ
Trigger: TTGTTGCTGGCGCACGTTCCAAGGGAGAACACAAAC...ATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp AGGCTCTGGCTCCCAGACCTGCGCTATCTAGCTACCGTCTTGTGGACTTATATTTTCAGGATCACGGATTaGCTCATGTCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: RLWLPDLRYLATVLWTYIFRITD*LMSSLK
Trigger: TTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAA...AATATAAGTCCACAAGACGGTAGCTAGATAGCGCAGGTCTGGGAGCCAGAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCCAAATGGATCACTGGTaGAGGAGGCCTGTGATCCAT +
Preference number: 4 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFQMDHW*RRPVIH
Trigger: ATGGATCACAGGCCTCCTCCACCAGTGATCCATTTG...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCACTGGGCTCCCCAAATaGATCACTGGTGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELALMLFLRSVDFRIERLTGLPK*ITGGGG
Trigger: GCCTCCTCCACCAGTGATCCATTTGGGGAGCCCAGT...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCTTATATTATCACCACTaGGCTCACCACTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFLYYHH*AHHWAP
Trigger: GGGAGCCCAGTGGTGAGCCCAGTGGTGATAATATAA...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACATGGCCACAAATCTGTaGTTCCCTTCCTTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: KLIPTATAYLANTSEKQDMATNL*FPSFPQ
Trigger: TTGCGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTCATAGCGACATAACCTaGGGGTACAGCAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSHSDIT*GYSSSA
Trigger: GGCACTGCTGCTGTACCCTCAGGTTATGTCGCTATG...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR GCA 90 bp GTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTATCAAAGTGGCTTCGCTaGGATCCTGACCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VRRRKWISRSPITAAGFLSKWLR*DPDLSS
Trigger: GGAAGAAAGGTCAGGATCGCAGCGAAGCCACTTTGA...TAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp AACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTACCTGGCTGGCCCCATaGGATGGGCTGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: NYRVVLATFLIIMNHQPRTWLAP*DGLSSW
Trigger: CCAGGAGCTCAGCCCATCGCATGGGGCCAGCCAGGT...ACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR GCA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACGTCGTCTGTATCCTGTaGCACCCCGACTTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: KLIPTATAYLANTSEKQDVVCIL*HPDFVE
Trigger: TTCAACAAAGTCGGGGTGGCACAGGATACAGACGAC...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGACCTCTTTATCAAAGTaGCTTCGCTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: GSEARVRRRKWISRSPITTSLSK*LRCDPD
Trigger: GTCAGGATCGCAGCGAAGCCACTTTGATAAAGAGGT...CGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp ACTTTTGCTGGGACTTTCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCACCTCTTTATCAAAGTaGCTTCGCTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: TFAGTFKAFFEDVICGRVTSLSK*LRCDPD
Trigger: GTCAGGATCGCAGCGAAGCCACTTTGATAAAGAGGT...GACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGAAAGTCCCAGCAAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp CGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGTCCTGGAGTCTTTCTTaGCGCTGGTTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: RRRKWISRSPITAAGFLVSWSLS*RWFSQL
Trigger: TAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGA...CACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCTCCTGGAGTCTTTCTTaGCGCTGGTTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFSWSLS*RWFSQL
Trigger: TAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGA...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCTCCTGGAGTCTTTCTTaGCGCTGGTTTTCACAGCTA +
Preference number: 4 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPSWSLS*RWFSQL
Trigger: TAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGA...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp CACCATGACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATGGCAGGAAAGAGACCTaGCTGGCCCCATGCGATGGG +
Preference number: 4 (lower is better)
Translates to: HHDTGQLQSCFGNILDHNGRKET*LAPCDG
Trigger: CCCATCGCATGGGGCCAGCCAGGTCTCTTTCCTGCC...ATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACGTCGGGTCACTGACGTaGGATGCTGATGATTTGGAT +
Preference number: 4 (lower is better)
Translates to: KLIPTATAYLANTSEKQDVGSLT*DADDLD
Trigger: ATCCAAATCATCAGCATCCCACGTCAGTGACCCGAC...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCCCCCAAATGGATCACTaGTGGAGGAGGCCTGTGATC +
Preference number: 4 (lower is better)
Translates to: ELALMLFLRSVDFRIERLPQMDH*WRRPVI
Trigger: GATCACAGGCCTCCTCCACCAGTGATCCATTTGGGG...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp TTCTTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FLVWKNSLPAEAGNPGLQFIMES*HNLSPR
Trigger: TCGGGGAGACAAGTTATGTCAAGATTCCATGATGAA...CTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp GCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: ALASNESVPTLSQFSDACFIMES*HNLSPR
Trigger: TCGGGGAGACAAGTTATGTCAAGATTCCATGATGAA...GCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp CAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGACAGCAACAACACCCTTaGGCTTCATCATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: QIGEGSEARVRRRKWISRQQQHP*ASSWNL
Trigger: AAGATTCCATGATGAAGCTCAAGGGTGTTGTTGCTG...TCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp AGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCGCTTCAGCTCATAGATaGGTTGAAAGAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: SVEKFSPCRGWQPWPSEIASAHR*VERDLS
Trigger: TGAGAGATCTCTTTCAACTCATCTATGAGCTGAAGC...GATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp CACCATGACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATATGGCGATCTGCTGTTaGACAAGGGGCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HHDTGQLQSCFGNILDHNMAICC*TRGCWP
Trigger: GGGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCAT...ATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTCTTCCAAAATGGTCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: RVRRRKWISRSPITAAGFSSKMV*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGACCATTTTGGAAGA...GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp GTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCATCTCTTCCAAAATGGTCTaGTACACAGCTTGTTCACAC +
Preference number: 4 (lower is better)
Translates to: VEKFSPCRGWQPWPSEIISSKMV*YTACSH
Trigger: GTGTGAACAAGCTGTGTACCAGACCATTTTGGAAGA...GATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp ACTTTCCAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTGGTTCAGAAATTACCTaGTACACGGGATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: TFQIGEGSEARVRRRKWIGSEIT*YTGSST
Trigger: TGTGGAAGATCCCGTGTACCAGGTAATTTCTGAACC...AATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS-3UTR CCA 90 bp AGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: SVEKFSPCRGWQPWPSEISLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...GATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTCCTGACCTTTCTTCCTaGAGTCTTTCTTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSPDLSS*SLSWRW
Trigger: CCAGCGCCAAGAAAGACTCCAGGAAGAAAGGTCAGG...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp CCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCCACTCCCGTTCTTCACTTTTGCTaGGACTTTCAAAGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PQTSQCQPCHNSLMPATPVLHFC*DFQSLL
Trigger: AAGAAGGCTTTGAAAGTCCCAGCAAAAGTGAAGAAC...GGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp GAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: EGSEARVRRRKWISRSPIFIMES*HNLSPR
Trigger: TCGGGGAGACAAGTTATGTCAAGATTCCATGATGAA...GATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp AGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: RVRRRKWISRSPITAAGFSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp TTCTTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGTCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: FLVWKNSLPAEAGNPGLQSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...CTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTATGGCCACAAATCTGTaGTTCCCTTCCTTCCCGCAA +
Preference number: 4 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSMATNL*FPSFPQ
Trigger: TTGCGGGAAGGAAGGGAATCACAGATTTGTGGCCAT...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp TGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCATGCTTCAGCTCATAGATaGGTTGAAAGAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: CGKILSLQRLATLAFRNHASAHR*VERDLS
Trigger: TGAGAGATCTCTTTCAACTCATCTATGAGCTGAAGC...ATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp CAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGAGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: QIGEGSEARVRRRKWISRVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...TCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000106827.8
CDS-3UTR TCA 90 bp AACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCAGTTTGTGTGGGCATaGAGGCGGCTGGCGGGAACT +
Preference number: 4 (lower is better)
Translates to: NYRVVLATFLIIMNHQPRQFVWA*RRLAGT
Trigger: AGTTCCCGCCAGCCGCCTTCATGCCCACACAAACTG...ACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp ACATTACATGATGGGGTTTCTGTAGACACTGGGATGGATACGAGTTATCAAAAAGGCTGGGGTTGGAGGTaGGTTGGTAGATGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: TLHDGVSVDTGMDTSYQKGWGWR*VGRWCG
Trigger: ACCACACCATCTACCAACTCACCTCCAACCCCAGCC...TTTTTGATAACTCGTATCCATCCCAGTGTCTACAGAAACCCCATCATGTAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR GCA 90 bp AGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCACAGCTTGTTCACACTaGTTATCCTTTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: RVRRRKWISRSPITAAGFTACSH*LSFCAF
Trigger: AAAGGCACAAAAGGATAAGCAGTGTGAACAAGCTGT...GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CCA 90 bp GGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGTGCAAAACCCTGACGTaGTTCAGAAATTACCTGGTA +
Preference number: 4 (lower is better)
Translates to: GSEARVRRRKWISRSPITCKTLT*FRNYLV
Trigger: TACCAGGTAATTTCTGAACCACGTCAGGGTTTTGCA...CGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS-3UTR CCA 90 bp TTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCTCAAACACAATGTACTaGTACACGGGATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: FPRQLPILLTLQRSRTAFSNTMY*YTGSST
Trigger: TGTGGAAGATCCCGTGTACCAGTACATTGTGTTTGA...GAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCCCTTCTTTTGGCTGGTaGGAACCTGGTAAATGTTCT +
Preference number: 4 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPPSFGW*EPGKCS
Trigger: AGAACATTTACCAGGTTCCCACCAGCCAAAAGAAGG...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCCTTCCTTCTTTTGGCTaGTGGGAACCTGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPLPSFG*WEPGKC
Trigger: ACATTTACCAGGTTCCCACCAGCCAAAAGAAGGAAG...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCGAGAAAGGCATCACCTaGGGTTGCAGGAGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCEKGIT*GCRSRG
Trigger: CCCCCTACTCCTGCAACCCCAGGTGATGCCTTTCTC...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCCACTGGGCTCACCACTaGGCTCCCCAAATGGATCAC +
Preference number: 4 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCHWAHH*APQMDH
Trigger: GTGATCCATTTGGGGAGCCCAGTGGTGAGCCCAGTG...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp AGATGGTGTGGTAGAAGTCACAGGGGTCAAGTTCAGTaGGGAGATGTCAAAGTCATCACAGTCGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: RWCGRSHRGQVQ*GDVKVITVVCI
Trigger: GATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACTTGACCCCTGTGACTTCTACCACACCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR GCA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCACAGCTTGTTCACACTaGTTATCCTTTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPTACSH*LSFCAF
Trigger: AAAGGCACAAAAGGATAAGCAGTGTGAACAAGCTGT...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTACCTCTTTATCAAAGTaGCTTCGCTGCGATCCTGAC +
Preference number: 4 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSTSLSK*LRCDPD
Trigger: GTCAGGATCGCAGCGAAGCCACTTTGATAAAGAGGT...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp CTGGCCTTCAGAAATCATCTTAATTCTTCTGCAGGTTCTGCGTTCAACAGAATCGTTTGTGTTCTCCCTTaGAACGTGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: LAFRNHLNSSAGSAFNRIVCVLP*NVRQQQ
Trigger: TTGTTGCTGGCGCACGTTCCAAGGGAGAACACAAAC...GATTCTGTTGAACGCAGAACCTGCAGAAGAATTAAGATGATTTCTGAAGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS-3UTR CCA 90 bp ATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCGACTTTGTTGAAGAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: MSKSSQSSVSCATPTLLKSLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...CTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCCCGCCTGGGCTGTTTTaGTGGCCACAAATCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCPPGLF*WPQICD
Trigger: ATCACAGATTTGTGGCCATCAAAACAGCCCAGGCGG...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR GCA 90 bp GTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAACAGCTTGTTCACACTaGTTATCCTTTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VRRRKWISRSPITAAGFLTACSH*LSFCAF
Trigger: AAAGGCACAAAAGGATAAGCAGTGTGAACAAGCTGT...TAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR GCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTATCCTTCCCCATTTTCTaGCTGGGCTTGTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLSFPIF*LGLSLC
Trigger: ACAGAGTGACAAGCCCAGGCAGAAAATGGGGAAGGA...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTAGTTTGTGTTCTCCCTTaGAACGTGCGCCAGCAACAA +
Preference number: 4 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLVCVLP*NVRQQQ
Trigger: TTGTTGCTGGCGCACGTTCCAAGGGAGAACACAAAC...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCTTATATCAGGAGGGGTaGACATGTCTCCAAAAAGTT +
Preference number: 4 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPLYQEG*TCLQKV
Trigger: AACTTTTTGGAGACATGTCCACCCCTCCTGATATAA...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCTCTGTGGACTTGACCTaGCAGAGTCATTCGTGCCTG +
Preference number: 4 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCSVDLT*QSHSCL
Trigger: CAGGCACGAATGACTCTGCCAGGTCAAGTCCACAGA...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTACCATCTGGAAATCCTTaGACGACTCCTTCCCCATTT +
Preference number: 4 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLPSGNP*TTPSPF
Trigger: AAATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGG...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCAGTCTTTCTTGGCGCTaGTTTTCACAGCTACTTGAA +
Preference number: 4 (lower is better)
Translates to: ELALMLFLRSVDFRIERLSLSWR*FSQLLE
Trigger: TTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACT...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR TCA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTTCTCATCAAAGATTTTaGTTCCTCCAAAGGAGATGG +
Preference number: 4 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSSHQRF*FLQRRW
Trigger: CCATCTCCTTTGGAGGAATCAAAATCTTTGATGAGA...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CCA 90 bp CACCATGACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATTTCAGGATCACGGATTaGCTCATGTCCAGCCTCAAA +
Preference number: 4 (lower is better)
Translates to: HHDTGQLQSCFGNILDHNFRITD*LMSSLK
Trigger: TTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAA...ATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTAGGGGTCAAGTTCAGTTaGGAGATGTCAAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLGVKFS*EMSKSS
Trigger: TGATGACTTTGACATCTCCCAACTGAACTTGACCCC...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCCTAGCTACCGTCTTGTaGACTTATATTATCACCACT +
Preference number: 4 (lower is better)
Translates to: ELALMLFLRSVDFRIERLLATVL*TYIITT
Trigger: AGTGGTGATAATATAAGTCCACAAGACGGTAGCTAG...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTAGTTTTCACAGCTACTTaGAGTTCTGTCTCAGTTGAC +
Preference number: 4 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLVFTAT*SSVSVD
Trigger: GTCAACTGAGACAGAACTTCAAGTAGCTGTGAAAAC...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CCA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTACCAAAAAGTTCTAATTaGGTCACAGCACTTACAGGT +
Preference number: 4 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLPKSSN*VTALTG
Trigger: ACCTGTAAGTGCTGTGACCCAATTAGAACTTTTTGG...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp ACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTaGATCATAATGAATCACCAACCACGTCATTGCCTT +
Preference number: 4 (lower is better)
Translates to: TQDNYRVVLATF*IIMNHQPRHCL
Trigger: AAGGCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR TCA 90 bp AACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTGCTTCAGCTCATAGATaGGTTGAAAGAGATCTCTCA +
Preference number: 4 (lower is better)
Translates to: NYRVVLATFLIIMNHQPRASAHR*VERDLS
Trigger: TGAGAGATCTCTTTCAACTCATCTATGAGCTGAAGC...ACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp TTCTTCACCATGACACAGGACAACTACAGAGTTGTTTaGGCAACATTCTTGATCATAATGAATCACCAACCA +
Preference number: 4 (lower is better)
Translates to: FFTMTQDNYRVV*ATFLIIMNHQP
Trigger: TGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
3UTR CAA 72 bp TACCGGCCAATTTCAATCAGTCATCTCAAGGTTAGTTaGACTTTTCAATACTCCCAGATCCAATCACATGAT +
Preference number: 4 (lower is better)
Translates to: YRPISISHLKVS*TFQYSQIQSHD
Trigger: ATCATGTGATTGGATCTGGGAGTATTGAAAAGTCAAACTAACCTTGAGATGACTGATTGAAATTGGCCGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR GCA 90 bp AACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTACAGCTTGTTCACACTaGTTATCCTTTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: NYRVVLATFLIIMNHQPRTACSH*LSFCAF
Trigger: AAAGGCACAAAAGGATAAGCAGTGTGAACAAGCTGT...ACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTCACAGTGGGCCAGGCTaGCTGGGTGGCAGGAAAGAG +
Preference number: 5 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLAHSGPG*LGGRKE
Trigger: CTCTTTCCTGCCACCCAGCAAGCCTGGCCCACTGTG...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp GAGGTACAGGTCAGGGAGGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCAACACCTTCCTTCTTTaGGCTGGTGGGAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: EVQVREGWSGFREGTGGGNTFLL*AGGNLV
Trigger: TACCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT...GCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCCTCCCTGACCTGTACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp GACATAGAGCCAAACACATCTGCACTCCCCGGAAGCGTCTGGGACGACGACGGGCCAATCAGCTTGGCTTaGTACCGGACCCCTTCGCCT +
Preference number: 5 (lower is better)
Translates to: DIEPNTSALPGSVWDDDGPISLA*YRTPSP
Trigger: AGGCGAAGGGGTCCGGTACAAAGCCAAGCTGATTGG...CCCGTCGTCGTCCCAGACGCTTCCGGGGAGTGCAGATGTGTTTGGCTCTATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp GAGGTACAGGTCAGGGAGGGCTGGTCAGGCTTCCGGGAGGGTACGGGTGGAGGCGTACTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: EVQVREGWSGFREGTGGGVLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGTAC...GCCTCCACCCGTACCCTCCCGGAAGCCTGACCAGCCCTCCCTGACCTGTACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp AAGACGCTCCAGAACAGCTGGCGGTGCAGCCCCACCTCCTCCTGTTCACTAGCTGGTCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: KTLQNSWRCSPTSSCSLAGLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGACC...AGCTAGTGAACAGGAGGAGGTGGGGCTGCACCGCCAGCTGTTCTGGAGCGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp CTTCTTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCACCAATCAGCTTGGCTTaGTACCGGACCCCTTCGCCT +
Preference number: 5 (lower is better)
Translates to: LLSVEKFSPCRGWQPWPSPISLA*YRTPSP
Trigger: AGGCGAAGGGGTCCGGTACAAAGCCAAGCTGATTGG...TGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp AGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCTAAAGGACGGAGGATaGAGCCAGGCTCAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SSVGRCQSHHSRLYPVPPLKDGG*SQAQLG
Trigger: GCCCAGCTGAGCCTGGCTCAATCCTCCGTCCTTTAG...GGGTGGCACAGGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp CCGGAAGCGTCTGGGACGACGACGGGAGAAAGGCATCACCTGGGGTTGCAGGAGTTACAGGTTGACTTTTaGGCACATCATAAACACCTT +
Preference number: 5 (lower is better)
Translates to: PEASGTTTGERHHLGLQELQVDF*AHHKHL
Trigger: AAGGTGTTTATGATGTGCCAAAAAGTCAACCTGTAA...CTCCTGCAACCCCAGGTGATGCCTTTCTCCCGTCGTCGTCCCAGACGCTTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp TGGTATTGGTCACCATATTCCTGGGATAGAGGGACAGTGGTTCTGAACTTACCCCCAATCAGCTTGGCTTaGTACCGGACCCCTTCGCCT +
Preference number: 5 (lower is better)
Translates to: WYWSPYSWDRGTVVLNLPPISLA*YRTPSP
Trigger: AGGCGAAGGGGTCCGGTACAAAGCCAAGCTGATTGG...GGGTAAGTTCAGAACCACTGTCCCTCTATCCCAGGAATATGGTGACCAATACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp AGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCTCAATCCCAATCAGCTaGGCTTTGTACCGGACCCCT +
Preference number: 5 (lower is better)
Translates to: SVEKFSPCRGWQPWPSEISIPIS*ALYRTP
Trigger: AGGGGTCCGGTACAAAGCCAAGCTGATTGGGATTGA...GATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp TATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAGGGCAATTTGTGGCCACATGGCGATCTGCTGTaGAACAAGGGGCTGCTGGCC +
Preference number: 5 (lower is better)
Translates to: YLANTSEKQDCFQGNLWPHGDLL*NKGLLA
Trigger: GGCCAGCAGCCCCTTGTTCAACAGCAGATCGCCATG...TGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS TCA 90 bp GAACGTGCGCCAGCAACAACACCCTTGAGCTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGAGCTGCGGACACTTCATCAATCCCA +
Preference number: 5 (lower is better)
Translates to: ERAPATTPLSFIMES*HNLSPRAADTSSIP
Trigger: TGGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAGTTATGTCAAGATTCCATGATGAAGCTCAAGGGTGTTGTTGCTGGCGCACGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS-3UTR CAA 90 bp CTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGTGTTTGTGTTCTCCCTaGGAACGTGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: LKQGYEEGSGFLDLPSRLCLCSP*ERAPAT
Trigger: TGTTGCTGGCGCACGTTCCAAGGGAGAACACAAACA...CAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp GGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGTGTTTGTGTTCTCCCTaGGAACGTGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: GLKQGYEEGSGFLDLPSRCLCSP*ERAPAT
Trigger: TGTTGCTGGCGCACGTTCCAAGGGAGAACACAAACA...CCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp CCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCCACTCCCAGGGGTCAAGTTCAGTaGGGAGATGTCAAAGTCATC +
Preference number: 5 (lower is better)
Translates to: PQTSQCQPCHNSLMPATPRGQVQ*GDVKVI
Trigger: GATGACTTTGACATCTCCCAACTGAACTTGACCCCT...GGGAGTGGCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp AAGGGATGGGGATACGGGTATGACACTGATGGAGAGACTCAGATAGCCACACTGTGGGATGCTGATGATTaGGATGGAGAGCTCTGCCTA +
Preference number: 5 (lower is better)
Translates to: KGWGYGYDTDGETQIATLWDADD*DGELCL
Trigger: TAGGCAGAGCTCTCCATCCAAATCATCAGCATCCCA...CAGTGTGGCTATCTGAGTCTCTCCATCAGTGTCATACCCGTATCCCCATCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp CTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGTTCCTGGAGTCTTTCTaGGCGCTGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: LKQGYEEGSGFLDLPSRLFLESF*ALVFTA
Trigger: AGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGAA...CAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp ACTTTTGCTGGGACTTTCAAAGCCTTCTTCGAAGATGTCATCTGCGGTCGGGTCTTTCAGGATCACGGATaGGCTCATGTCCAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: TFAGTFKAFFEDVICGRVFQDHG*AHVQPQ
Trigger: TTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAA...GACCCGACCGCAGATGACATCTTCGAAGAAGGCTTTGAAAGTCCCAGCAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS CCA 90 bp GGTGGGAACCTGGTAAATGTTCTCTTCTGTTTCAGGATCACGGATTaGCTCATGTCCAGCCTCAAACACAATGTACTGGTACACGGGATC +
Preference number: 5 (lower is better)
Translates to: GGNLVNVLFCFRITD*LMSSLKHNVLVHGI
Trigger: GATCCCGTGTACCAGTACATTGTGTTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAACAGAAGAGAACATTTACCAGGTTCCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp CTGGCCTTCAGAAATCATCTTAATTCTTCTGCAGGTTCTGCGTTCAACAGAATCCCAATCAGCTTGGCTTaGTACCGGACCCCTTCGCCT +
Preference number: 5 (lower is better)
Translates to: LAFRNHLNSSAGSAFNRIPISLA*YRTPSP
Trigger: AGGCGAAGGGGTCCGGTACAAAGCCAAGCTGATTGG...GATTCTGTTGAACGCAGAACCTGCAGAAGAATTAAGATGATTTCTGAAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS-3UTR CAA 90 bp TTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAAGGTCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: LVWKNSLPAEAGNPGLQKGLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGACC...TTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp CGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTAGTGGGTCTGGTACACAGCTaGTTCACACTGCTTATCCTT +
Preference number: 5 (lower is better)
Translates to: RRRKWISRSPITAAGFLVGLVHS*FTLLIL
Trigger: AAGGATAAGCAGTGTGAACAAGCTGTGTACCAGACC...CACTAAGAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp ATGTCAAAGTCATCACAGTCGTCTGTATCCTGTGCCACCCCGACTTTGTTGAAGTTCCTGGAGTCTTTCTaGGCGCTGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: MSKSSQSSVSCATPTLLKFLESF*ALVFTA
Trigger: AGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGAA...CTTCAACAAAGTCGGGGTGGCACAGGATACAGACGACTGTGATGACTTTGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS CCA 90 bp GGTGGGAACCTGGTAAATGTTCTCTTCTGTTTCAGGATCACGGATTaGCTCATGTCCAGCCTCAAACACAATGTACTGGTACACAGCTTG +
Preference number: 5 (lower is better)
Translates to: GGNLVNVLFCFRITD*LMSSLKHNVLVHSL
Trigger: CAAGCTGTGTACCAGTACATTGTGTTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAACAGAAGAGAACATTTACCAGGTTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTTGTTTGTGTTCTCCCTaGGAACGTGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSCLCSP*ERAPAT
Trigger: TGTTGCTGGCGCACGTTCCAAGGGAGAACACAAACA...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCTGTTTGTGTTCTCCCTaGGAACGTGCGCCAGCAACA +
Preference number: 5 (lower is better)
Translates to: ELALMLFLRSVDFRIERLCLCSP*ERAPAT
Trigger: TGTTGCTGGCGCACGTTCCAAGGGAGAACACAAACA...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp GTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAATCATCCAGCTCATAGATGAGTaGAAAGAGATCTCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: VEKFSPCRGWQPWPSEIIQLIDE*KEISQV
Trigger: GACTTGAGAGATCTCTTTCAACTCATCTATGAGCTG...GATGATTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp GCTTTGGCCTCAAACGAGTCAGTGCCAACCTTGTCACAATTCTCTGATGCCTGCCACAGCACTTACAGGTaGACTTTTTGGCACATCATA +
Preference number: 5 (lower is better)
Translates to: ALASNESVPTLSQFSDACHSTYR*TFWHII
Trigger: TATGATGTGCCAAAAAGTCAACCTGTAAGTGCTGTG...GCAGGCATCAGAGAATTGTGACAAGGTTGGCACTGACTCGTTTGAGGCCAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS TCA 90 bp GATTCCCTTCCTTCCCGCAAACGTATCCGAAAGCCCGATGATCTGTaGTGTCCTTCGCAATGTAGGAAATTTCATGAACAGCATGGTGAT +
Preference number: 5 (lower is better)
Translates to: DSLPSRKRIRKPDDL*CPSQCRKFHEQHGD
Trigger: ATCACCATGCTGTTCATGAAATTTCCTACATTGCGAAGGACATCACAGATCATCGGGCTTTCGGATACGTTTGCGGGAAGGAAGGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS-3UTR CAA 90 bp CAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGACAGCTCATAGATGAGTaGAAAGAGATCTCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: QIGEGSEARVRRRKWISRQLIDE*KEISQV
Trigger: GACTTGAGAGATCTCTTTCAACTCATCTATGAGCTG...TCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp AGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCAAAAAGATTTTCTGTTaGTGTTCTCCCTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: RVRRRKWISRSPITAAGFKKIFC*CSPLER
Trigger: ACGTTCCAAGGGAGAACACAAACAGAAAATCTTTTT...GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp AGGGTACGAAGAAGGAAGTGGATTTCTAGATCTCCCATCACGGCTGCTGGCTTCTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: RVRRRKWISRSPITAAGFFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...GAAGCCAGCAGCCGTGATGGGAGATCTAGAAATCCACTTCCTTCTTCGTACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACCAGCTCATAGATGAGTaGAAAGAGATCTCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: KLIPTATAYLANTSEKQDQLIDE*KEISQV
Trigger: GACTTGAGAGATCTCTTTCAACTCATCTATGAGCTG...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp ACAGGGGTCAAGTTCAGTTGGGAGATGTCAAAGTCATCACAGTCGTCTGTATCCCAGCTCATAGATGAGTaGAAAGAGATCTCTCAAGTC +
Preference number: 5 (lower is better)
Translates to: TGVKFSWEMSKSSQSSVSQLIDE*KEISQV
Trigger: GACTTGAGAGATCTCTTTCAACTCATCTATGAGCTG...GGATACAGACGACTGTGATGACTTTGACATCTCCCAACTGAACTTGACCCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp ACTTTCCAGATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTTCCAATTCTTCTCTTaGCTTCAGCTCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: TFQIGEGSEARVRRRKWIFQFFS*LQLIDE
Trigger: CTCATCTATGAGCTGAAGCAAAGAGAAGAATTGGAA...AATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAATCTGGAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp TTAGTGTGGAAAAATTCTCTCCCTGCAGAGGCTGGCAACCCTGGCCTTCAGAAAAAAAAGATTTTCTGTTaGTGTTCTCCCTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: LVWKNSLPAEAGNPGLQKKKIFC*CSPLER
Trigger: ACGTTCCAAGGGAGAACACAAACAGAAAATCTTTTT...TTTCTGAAGGCCAGGGTTGCCAGCCTCTGCAGGGAGAGAATTTTTCCACACTAA
44% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTAATTTTCTGCCTGGGCTaGTCACTCTGTGGACTTGAC +
Preference number: 5 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLIFCLG*SLCGLD
Trigger: GTCAAGTCCACAGAGTGACAAGCCCAGGCAGAAAAT...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp AGAGTTGTTTTGGCAACATTCTTGATCATAATGAATCACCAACCACGTCATTGCGGGGTTGGAGGTGAGTaGGTAGATGGTGTGGTAGAA +
Preference number: 5 (lower is better)
Translates to: RVVLATFLIIMNHQPRHCGVGGE*VDGVVE
Trigger: TTCTACCACACCATCTACCAACTCACCTCCAACCCC...GCAATGACGTGGTTGGTGATTCATTATGATCAAGAATGTTGCCAAAACAACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp ATTGGGGAGGGGTCTGAAGCAAGGGTACGAAGAAGGAAGTGGATTTCTAGATCTTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: IGEGSEARVRRRKWISRSFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...AGATCTAGAAATCCACTTCCTTCTTCGTACCCTTGCTTCAGACCCCTCCCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
CDS-3UTR CAA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: KLIPTATAYLANTSEKQDFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp TGGTGTGGTAGAAGTCACAGGGGTCAAGTTCAGTTGGGAGATGTCAAAGTCATCTTCTCATCAAAGATTTaGATTCCTCCAAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: WCGRSHRGQVQLGDVKVIFSSKI*IPPKEM
Trigger: CATCTCCTTTGGAGGAATCAAAATCTTTGATGAGAA...GATGACTTTGACATCTCCCAACTGAACTTGACCCCTGTGACTTCTACCACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp CACCATGACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATTTCCTGGAGTCTTTCTaGGCGCTGGTTTTCACAGCT +
Preference number: 5 (lower is better)
Translates to: HHDTGQLQSCFGNILDHNFLESF*ALVFTA
Trigger: AGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGAA...ATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp CACCATGACACAGGACAACTACAGAGTTGTTTTGGCAACATTCTTGATCATAATTTTCAGGATCACGGATaGGCTCATGTCCAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: HHDTGQLQSCFGNILDHNFQDHG*AHVQPQ
Trigger: TTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAA...ATTATGATCAAGAATGTTGCCAAAACAACTCTGTAGTTGTCCTGTGTCATGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp ACATTACATGATGGGGTTTCTGTAGACACTGGGATGGATACGAGTTATCAAAAAAACACCTTCCTTCTTTaGGCTGGTGGGAACCTGGTA +
Preference number: 5 (lower is better)
Translates to: TLHDGVSVDTGMDTSYQKNTFLL*AGGNLV
Trigger: TACCAGGTTCCCACCAGCCAAAAGAAGGAAGGTGTT...TTTTTGATAACTCGTATCCATCCCAGTGTCTACAGAAACCCCATCATGTAATGT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp AAGTTGATTCCCACGGCAACTGCCTATCTTGCTAACACTTCAGAGAAGCAGGACTTACAGGTTGACTTTTaGGCACATCATAAACACCTT +
Preference number: 5 (lower is better)
Translates to: KLIPTATAYLANTSEKQDLQVDF*AHHKHL
Trigger: AAGGTGTTTATGATGTGCCAAAAAGTCAACCTGTAA...GTCCTGCTTCTCTGAAGTGTTAGCAAGATAGGCAGTTGCCGTGGGAATCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp TGTCAGAACGCAGAAATTGAAAGGAACCGAACCCACGGAGTAAACATTTTCTTAACCATCTGGAAATCCTaGAACGACTCCTTCCCCATT +
Preference number: 5 (lower is better)
Translates to: CQNAEIERNRTHGVNIFLTIWKS*NDSFPI
Trigger: AATGGGGAAGGAGTCGTTCAAGGATTTCCAGATGGT...TAAGAAAATGTTTACTCCGTGGGTTCGGTTCCTTTCAATTTCTGCGTTCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp TATCTTGCTAACACTTCAGAGAAGCAGGACTGCTTTCAGGGCAATTTGTGGCCAAAAAAGATTTTCTGTTaGTGTTCTCCCTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: YLANTSEKQDCFQGNLWPKKIFC*CSPLER
Trigger: ACGTTCCAAGGGAGAACACAAACAGAAAATCTTTTT...TGGCCACAAATTGCCCTGAAAGCAGTCCTGCTTCTCTGAAGTGTTAGCAAGATA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp AAACCATGTTGTTCCTTCTTCAGGTGGTTTCACTGGGCGACTGTGAGTTTTTCTTTCCAATTCTTCTCTTaGCTTCAGCTCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: KPCCSFFRWFHWATVSFSFQFFS*LQLIDE
Trigger: CTCATCTATGAGCTGAAGCAAAGAGAAGAATTGGAA...AGAAAAACTCACAGTCGCCCAGTGAAACCACCTGAAGAAGGAACAACATGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCTTCCAATTCTTCTCTTaGCTTCAGCTCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: ELALMLFLRSVDFRIERLFQFFS*LQLIDE
Trigger: CTCATCTATGAGCTGAAGCAAAGAGAAGAATTGGAA...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp ACATTACATGATGGGGTTTCTGTAGACACTGGGATGGATACGAGTTATCAAAAATCCATCAGGTGCTTCTaGTTCTTCACTTTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TLHDGVSVDTGMDTSYQKSIRCF*FFTFAG
Trigger: CCCAGCAAAAGTGAAGAACAAGAAGCACCTGATGGA...TTTTTGATAACTCGTATCCATCCCAGTGTCTACAGAAACCCCATCATGTAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS-3UTR CAA 90 bp GAGCTCGCATTGATGCTATTTCTTAGGTCTGTTGATTTTCGCATAGAGAGGCTCAAAAAGATTTTCTGTTaGTGTTCTCCCTTGGAACGT +
Preference number: 5 (lower is better)
Translates to: ELALMLFLRSVDFRIERLKKIFC*CSPLER
Trigger: ACGTTCCAAGGGAGAACACAAACAGAAAATCTTTTT...GAGCCTCTCTATGCGAAAATCAACAGACCTAAGAAATAGCATCAATGCGAGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS-3UTR CAA 90 bp TCAGAAATCATCTTAATTCTTCTGCAGGTTCTGCGTTCAACAGAATCCTCAAGTTTCCAATTCTTCTCTTaGCTTCAGCTCATAGATGAG +
Preference number: 5 (lower is better)
Translates to: SEIILILLQVLRSTESSSFQFFS*LQLIDE
Trigger: CTCATCTATGAGCTGAAGCAAAGAGAAGAATTGGAA...ACTTGAGGATTCTGTTGAACGCAGAACCTGCAGAAGAATTAAGATGATTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS CAA 72 bp CCCCGAGCTGCGGACACTTCATCAATCCCAATCAGCTaGGCTTTGTACCGGACCCCTTCGCCTTTAAACCTC +
Preference number: 6 (lower is better)
Translates to: PRAADTSSIPIS*ALYRTPSPLNL
Trigger: GAGGTTTAAAGGCGAAGGGGTCCGGTACAAAGCCAAGCTGATTGGGATTGATGAAGTGTCCGCAGCTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS TCA 72 bp TCAGCCGCCTGGGCTGTTTTGATGGCCACAAATCTGTaGTTCCCTTCCTTCCCGCAAACGTATCCGAAAGCC +
Preference number: 6 (lower is better)
Translates to: SAAWAVLMATNL*FPSFPQTYPKA
Trigger: GGCTTTCGGATACGTTTGCGGGAAGGAAGGGAATCACAGATTTGTGGCCATCAAAACAGCCCAGGCGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS TCA 72 bp CCAGCAACAACACCCTTGAGCTTCATCATGGAATCTTaGCATAACTTGTCTCCCCGAGCTGCGGACACTTCA +
Preference number: 6 (lower is better)
Translates to: PATTPLSFIMES*HNLSPRAADTS
Trigger: TGAAGTGTCCGCAGCTCGGGGAGACAAGTTATGTCAAGATTCCATGATGAAGCTCAAGGGTGTTGTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS CCA 72 bp CGCTGCGATCCTGACCTTTCTTCCTGGAGTCTTTCTTaGCGCTGGTTTTCACAGCTACTTGAAGTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: RCDPDLSSWSLS*RWFSQLLEVLS
Trigger: AGACAGAACTTCAAGTAGCTGTGAAAACCAGCGCCAAGAAAGACTCCAGGAAGAAAGGTCAGGATCGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
CDS CAA 90 bp AACTTGTCTCCCCGAGCTGCGGACACTTCATCAATCCCAATCAGCTaGGCTTTGTACCGGACCCCTTCGCCTTTAAACCTCTTTATCAAA +
Preference number: 6 (lower is better)
Translates to: NLSPRAADTSSIPIS*ALYRTPSPLNLFIK
Trigger: TTTGATAAAGAGGTTTAAAGGCGAAGGGGTCCGGTACAAAGCCAAGCTGATTGGGATTGATGAAGTGTCCGCAGCTCGGGGAGACAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS TCA 72 bp CAGTCAAAAGAGCCTTCACAGCTGCATGCAAAACCCTaGCGTGGTTCAGAAATTACCTGGTACACGGGATCT +
Preference number: 6 (lower is better)
Translates to: QSKEPSQLHAKP*RGSEITWYTGS
Trigger: AGATCCCGTGTACCAGGTAATTTCTGAACCACGTCAGGGTTTTGCATGCAGCTGTGAAGGCTCTTTTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS CCA 72 bp AAAAGAGCCTTCACAGCTGCATGCAAAACCCTGACGTaGTTCAGAAATTACCTGGTACACGGGATCTTCCAC +
Preference number: 6 (lower is better)
Translates to: KRAFTAACKTLT*FRNYLVHGIFH
Trigger: GTGGAAGATCCCGTGTACCAGGTAATTTCTGAACCACGTCAGGGTTTTGCATGCAGCTGTGAAGGCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106826.8
CDS CAA 90 bp TGGTGGGAACCTGGTAAATGTTCTCTTCTGTTTCAGGATCACGGATaGGCTCATGTCCAGCCTCAAACACAATGTACTGGTACACGGGAT +
Preference number: 6 (lower is better)
Translates to: WWEPGKCSLLFQDHG*AHVQPQTQCTGTRD
Trigger: ATCCCGTGTACCAGTACATTGTGTTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAACAGAAGAGAACATTTACCAGGTTCCCACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106830.9
CDS CAA 90 bp TGGTGGGAACCTGGTAAATGTTCTCTTCTGTTTCAGGATCACGGATaGGCTCATGTCCAGCCTCAAACACAATGTACTGGTACACAGCTT +
Preference number: 6 (lower is better)
Translates to: WWEPGKCSLLFQDHG*AHVQPQTQCTGTQL
Trigger: AAGCTGTGTACCAGTACATTGTGTTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAACAGAAGAGAACATTTACCAGGTTCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000146078.8
CDS CAA 90 bp AAAGCGCGAGTCGAAATCCTCCAGCGGCTGGCTATTACTTACAGGTaGACTTTTTGGCACATCATAAACACCTTCCTTCTTTTGGCTGGT +
Preference number: 6 (lower is better)
Translates to: KARVEILQRLAITYR*TFWHIINTFLLLAG
Trigger: ACCAGCCAAAAGAAGGAAGGTGTTTATGATGTGCCAAAAAGTCAACCTGTAAGTAATAGCCAGCCGCTGGAGGATTTCGACTCGCGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000149672.2
CDS TCA 72 bp CCTTCCCGCAAACGTATCCGAAAGCCCGATGATCTGTaGTGTCCTTCGCAATGTAGGAAATTTCATGAACAG +
Preference number: 6 (lower is better)
Translates to: PSRKRIRKPDDL*CPSQCRKFHEQ
Trigger: CTGTTCATGAAATTTCCTACATTGCGAAGGACATCACAGATCATCGGGCTTTCGGATACGTTTGCGGGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS CAA 90 bp CCTCCAAAGGAGATGGTTAAAAAGATTTTCTGTTTGTGTTCTCCCTaGGAACGTGCGCCAGCAACAACACCCTTGAGCTTCATCATGGAA +
Preference number: 6 (lower is better)
Translates to: PPKEMVKKIFCLCSP*ERAPATTPLSFIME
Trigger: TTCCATGATGAAGCTCAAGGGTGTTGTTGCTGGCGCACGTTCCAAGGGAGAACACAAACAGAAAATCTTTTTAACCATCTCCTTTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS CAA 72 bp GAGATGGTTAAAAAGATTTTCTGTTTGTGTTCTCCCTaGGAACGTGCGCCAGCAACAACACCCTTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: EMVKKIFCLCSP*ERAPATTPLSF
Trigger: GAAGCTCAAGGGTGTTGTTGCTGGCGCACGTTCCAAGGGAGAACACAAACAGAAAATCTTTTTAACCATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000143644.8
ENSMUST00000146078.8
ENSMUST00000149672.2
CDS CAA 72 bp CCTGGTAAATGTTCTCTTCTGTTTCAGGATCACGGATaGGCTCATGTCCAGCCTCAAACACAATGTACTGGT +
Preference number: 6 (lower is better)
Translates to: PGKCSLLFQDHG*AHVQPQTQCTG
Trigger: ACCAGTACATTGTGTTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAACAGAAGAGAACATTTACCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS CCA 72 bp CTGGTAAATGTTCTCTTCTGTTTCAGGATCACGGATTaGCTCATGTCCAGCCTCAAACACAATGTACTGGTA +
Preference number: 6 (lower is better)
Translates to: LVNVLFCFRITD*LMSSLKHNVLV
Trigger: TACCAGTACATTGTGTTTGAGGCTGGACATGAGCCAATCCGTGATCCTGAAACAGAAGAGAACATTTACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106830.9
ENSMUST00000146078.8
CDS CAA 72 bp TTCCAATTCTTCTCTTTGCTTCAGCTCATAGATGAGTaGAAAGAGATCTCTCAAGTCCAGGATAACAGGTTC +
Preference number: 6 (lower is better)
Translates to: FQFFSLLQLIDE*KEISQVQDNRF
Trigger: GAACCTGTTATCCTGGACTTGAGAGATCTCTTTCAACTCATCTATGAGCTGAAGCAAAGAGAAGAATTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000106826.8
ENSMUST00000106827.8
ENSMUST00000106830.9
ENSMUST00000146078.8
ENSMUST00000149672.2