Pregenerated sensors for DAAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034574Ensembl transcript IDs: ENSMUST00000085299.4, ENSMUST00000221317.2, ENSMUST00000223272.2
Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR GCA 90 bp | CACTCCTCCTCGCCACGTCTCCATCAGCACCGCAGCCAGGATGCTTaGAGCCTGTGGTTAGCGCGGGGCTGGGAGAGTCAGCTCTGCTTT | + |
Preference number: 1 (lower is better) Translates to: HSSSPRLHQHRSQDA*SLWLARGWESQLCF Trigger: AAAGCAGAGCTGACTCTCCCAGCCCCGCGCTAACCACAGGCTGCAAGCATCCTGGCTGCGGTGCTGATGGAGACGTGGCGAGGAGGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR GCA 90 bp | GGCCTACATGGATGTGAGGATGATTCTAAGAGGGGCAAGGGGACATaGGACACAGACTTGCTCTCTGTTGTGAGTCTCTCTCCACAGTTC | + |
Preference number: 1 (lower is better) Translates to: GLHGCEDDSKRGKGT*DTDLLSVVSLSPQF Trigger: GAACTGTGGAGAGAGACTCACAACAGAGAGCAAGTCTGTGTCGCATGTCCCCTTGCCCCTCTTAGAATCATCCTCACATCCATGTAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR GCA 90 bp | GGGCACGGTGTTCAGGGAAAGAAAATGAATCCCACTCAATATGAATaGATACGCAAAGAGTTTCTGGGTGCACACATTAACATGAACTTT | + |
Preference number: 1 (lower is better) Translates to: GHGVQGKKMNPTQYE*IRKEFLGAHINMNF Trigger: AAAGTTCATGTTAATGTGTGCACCCAGAAACTCTTTGCGTATGCATTCATATTGAGTGGGATTCATTTTCTTTCCCTGAACACCGTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGCCTGTGAGGAAAACTaGAGACGCCCCAGAAGCACC | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSVLLTACEEN*RRPRST Trigger: GGTGCTTCTGGGGCGTCTTCAGTTTTCCTCACAGGC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCTTTATCCTGGGACATaGAGCACGGCCTGTGAGGAA | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSVLLTLYPGT*STACEE Trigger: TTCCTCACAGGCCGTGCTGCATGTCCCAGGATAAAG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTaGCTTACCACTACAGCTCTACTATGCCTGGTACATAGTAAGTGC | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSV*LTTTALLCLVHSKC Trigger: GCACTTACTATGTACCAGGCATAGTAGAGCTGTAGTGGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 90 bp | TGGTATTCTACCGTCCCTGAAAACACCGTGGAGAATGTGAACTCCTaGGTGGGCAGGGACTCTGTCTTGCTTACCACTACAGCTCTACTA | + |
Preference number: 2 (lower is better) Translates to: WYSTVPENTVENVNS*VGRDSVLLTTTALL Trigger: TAGTAGAGCTGTAGTGGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTTTTCAGGGACGGTAGAATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCTCCATTTCTACCAGTaGAAATCGTCTCACTACACC | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSVLLTLHFYQ*KSSHYT Trigger: GGTGTAGTGAGACGATTTTCACTGGTAGAAATGGAG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCACTACAGCTCTACTATaGCTGGTACATAGTAAGTGC | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSVLLTTTALL*LVHSKC Trigger: GCACTTACTATGTACCAGGCATAGTAGAGCTGTAGT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTGTAATGGAAAGTTCTaGTCACCCCAAAAGGGCTGC | + |
Preference number: 2 (lower is better) Translates to: RFLSTMHIGILPSLKTPWCNGKF*SPQKGC Trigger: GCAGCCCTTTTGGGGTGACCAGAACTTTCCATTACA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTCAATGAGGAAGCTCTaGCAATTCTGGTTCTTAACC | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSVLLTSMRKL*QFWFLT Trigger: GGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCACACACAATTTAAAATaGCAACACGTAACAGCGATC | + |
Preference number: 2 (lower is better) Translates to: NTVENVNSLVGRDSVLLTTHNLK*QHVTAI Trigger: GATCGCTGTTACGTGTTGTCATTTTAAATTGTGTGT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGACTACAGCTCTACTATaGCTGGTACATAGTAAGTGC | + |
Preference number: 2 (lower is better) Translates to: RFLSTMHIGILPSLKTPWTTALL*LVHSKC Trigger: GCACTTACTATGTACCAGGCATAGTAGAGCTGTAGT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAAATTGCCATTGTTTTaGATCGCAAGGCAGTGTAAT | + |
Preference number: 2 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLKLPLF*IARQCN Trigger: ATTACACTGCCTTGCGATCCAAAACAATGGCAATTT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCAATGAGGAAGCTCTaGCAATTCTGGTTCTTAACC | + |
Preference number: 2 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSMRKL*QFWFLT Trigger: GGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGAGGAGAGAAGAAATTaGCATTGTTTTGGATCGCAA | + |
Preference number: 2 (lower is better) Translates to: RFLSTMHIGILPSLKTPWEERRN*HCFGSQ Trigger: TTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGCAGGGACTCTGTCTTaGTTACCACTACAGCTCTAC | + |
Preference number: 2 (lower is better) Translates to: IVRFLSTMHIGILPSLKTAGTLS*LPLQLY Trigger: GTAGAGCTGTAGTGGTAAGCAAGACAGAGTCCCTGC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGTGTAATGGAAAGTTCTaGTCACCCCAAAAGGGCTGC | + |
Preference number: 2 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQCNGKF*SPQKGC Trigger: GCAGCCCTTTTGGGGTGACCAGAACTTTCCATTACA...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCCACTAAGTCTTGGATaGGAAATCTTATTTGTCAGG | + |
Preference number: 2 (lower is better) Translates to: RFLSTMHIGILPSLKTPWPLSLG*EILFVR Trigger: CCTGACAAATAAGATTTCCCATCCAAGACTTAGTGG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCTCCATTTCTACCAGTaGAAATCGTCTCACTACACC | + |
Preference number: 2 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQLHFYQ*KSSHYT Trigger: GGTGTAGTGAGACGATTTTCACTGGTAGAAATGGAG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATGTAATGGAAAGTTCTaGTCACCCCAAAAGGGCTGC | + |
Preference number: 2 (lower is better) Translates to: IVRFLSTMHIGILPSLKTCNGKF*SPQKGC Trigger: GCAGCCCTTTTGGGGTGACCAGAACTTTCCATTACA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 90 bp | TTACACACACACATTCACACCTTCACTCACAGAGGAGAGAAGAAATaGCCATTGTTTTGGATCGCAAGGCAGTGTAATGGAAAGTTCTGG | + |
Preference number: 2 (lower is better) Translates to: LHTHIHTFTHRGEKK*PLFWIARQCNGKFW Trigger: CCAGAACTTTCCATTACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGAAGGTGTGAATGTGTGTGTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCTCCATTTCTACCAGTaGAAATCGTCTCACTACACC | + |
Preference number: 2 (lower is better) Translates to: IPYNLRILGAGRSVVSVHLHFYQ*KSSHYT Trigger: GGTGTAGTGAGACGATTTTCACTGGTAGAAATGGAG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGAGGAGAGAAGAAATTaGCATTGTTTTGGATCGCAA | + |
Preference number: 2 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQEERRN*HCFGSQ Trigger: TTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCCCACTCAATATGAATaGATACGCAAAGAGTTTCTG | + |
Preference number: 2 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQPTQYE*IRKEFL Trigger: CAGAAACTCTTTGCGTATGCATTCATATTGAGTGGG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCCCACTCAATATGAATaGATACGCAAAGAGTTTCTG | + |
Preference number: 2 (lower is better) Translates to: IPYNLRILGAGRSVVSVHPTQYE*IRKEFL Trigger: CAGAAACTCTTTGCGTATGCATTCATATTGAGTGGG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCATGATATGAATGTGTaGAAGATGTTCTCAACAGAC | + |
Preference number: 2 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQHDMNV*KMFSTD Trigger: GTCTGTTGAGAACATCTTGCACACATTCATATCATG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGAAATTGCCATTGTTTTaGATCGCAAGGCAGTGTAAT | + |
Preference number: 2 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQKLPLF*IARQCN Trigger: ATTACACTGCCTTGCGATCCAAAACAATGGCAATTT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR GCA 72 bp | CTCCTCGCCACGTCTCCATCAGCACCGCAGCCAGGATaGTTGCAGCCTGTGGTTAGCGCGGGGCTGGGAGAG | + |
Preference number: 3 (lower is better) Translates to: LLATSPSAPQPG*LQPVVSAGLGE Trigger: CTCTCCCAGCCCCGCGCTAACCACAGGCTGCAAGCATCCTGGCTGCGGTGCTGATGGAGACGTGGCGAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR TCA 72 bp | GCAAGGGGACATGCGACACAGACTTGCTCTCTGTTGTaGGTCTCTCTCCACAGTTCCAAAACTGAGCTGGAC | + |
Preference number: 3 (lower is better) Translates to: ARGHATQTCSLL*VSLHSSKTELD Trigger: GTCCAGCTCAGTTTTGGAACTGTGGAGAGAGACTCACAACAGAGAGCAAGTCTGTGTCGCATGTCCCCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR TCA 72 bp | GGTATTCTACCGTCCCTGAAAACACCGTGGAGAATGTaGACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTA | + |
Preference number: 3 (lower is better) Translates to: GILPSLKTPWRM*TPWWAGTLSCL Trigger: TAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTTTTCAGGGACGGTAGAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR GCA 72 bp | GGATGTGAGGATGATTCTAAGAGGGGCAAGGGGACATaGGACACAGACTTGCTCTCTGTTGTGAGTCTCTCT | + |
Preference number: 3 (lower is better) Translates to: GCEDDSKRGKGT*DTDLLSVVSLS Trigger: AGAGAGACTCACAACAGAGAGCAAGTCTGTGTCGCATGTCCCCTTGCCCCTCTTAGAATCATCCTCACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAGAGAAGAAATTGCCATaGTTTTGGATCGCAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLEKKLP*FWIARQ Trigger: CTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTC...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGAGAAGAAATTGCCATaGTTTTGGATCGCAAGGCAG | + |
Preference number: 3 (lower is better) Translates to: NTVENVNSLVGRDSVLLTEKKLP*FWIARQ Trigger: CTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGAGAATGTGAACTCCTaGGTGGGCAGGGACTCTGTC | + |
Preference number: 3 (lower is better) Translates to: IVRFLSTMHIGILPSLKTENVNS*VGRDSV Trigger: GACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR TCA 72 bp | GCTCACCCGTCTGTTTTCCAACTCCATTTCTACCAGTaGAAATCGTCTCACTACACCAACCTTGGGAACCAT | + |
Preference number: 3 (lower is better) Translates to: AHPSVFQLHFYQ*KSSHYTNLGNH Trigger: ATGGTTCCCAAGGTTGGTGTAGTGAGACGATTTTCACTGGTAGAAATGGAGTTGGAAAACAGACGGGTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGATTCTCTACTGCTCATaGTGTTTTATCTCCCTGAGA | + |
Preference number: 3 (lower is better) Translates to: RFLSTMHIGILPSLKTPWILYCS*CFISLR Trigger: TCTCAGGGAGATAAAACACAATGAGCAGTAGAGAAT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATATTCTCTACTGCTCATaGTGTTTTATCTCCCTGAGA | + |
Preference number: 3 (lower is better) Translates to: IPYNLRILGAGRSVVSVHILYCS*CFISLR Trigger: TCTCAGGGAGATAAAACACAATGAGCAGTAGAGAAT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAATTCTCTACTGCTCATaGTGTTTTATCTCCCTGAGA | + |
Preference number: 3 (lower is better) Translates to: IVRFLSTMHIGILPSLKTILYCS*CFISLR Trigger: TCTCAGGGAGATAAAACACAATGAGCAGTAGAGAAT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CCA 72 bp | TTTTTAAATAGTACGGTTCCTGTCTACTATGCACATTaGTATTCTACCGTCCCTGAAAACACCGTGGAGAAT | + |
Preference number: 3 (lower is better) Translates to: FLNSTVPVYYAH*YSTVPENTVEN Trigger: ATTCTCCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTATTTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR TCA 72 bp | ATTGTACAGGTAGCGTCACTGACACACAATTTAAAATaGCAACACGTAACAGCGATCACTTCAAATATTCTT | + |
Preference number: 3 (lower is better) Translates to: IVQVASLTHNLK*QHVTAITSNIL Trigger: AAGAATATTTGAAGTGATCGCTGTTACGTGTTGTCATTTTAAATTGTGTGTCAGTGACGCTACCTGTACAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR GCA 72 bp | TTCACAGCTTTTACACAGCACAGATTCCTCGCCATCTaGACTAAACATTATAGTTCATACAGATTAGTTTTT | + |
Preference number: 3 (lower is better) Translates to: FTAFTQHRFLAI*TKHYSSYRLVF Trigger: AAAAACTAATCTGTATGAACTATAATGTTTAGTGCAGATGGCGAGGAATCTGTGCTGTGTAAAAGCTGTGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | CTCGCCACGTCTCCATCAGCACCGCAGCCAGGATGCTaGCAGCCTGTGGTTAGCGCGGGGCTGGGAGAGTCA | + |
Preference number: 4 (lower is better) Translates to: LATSPSAPQPGC*QPVVSAGLGES Trigger: TGACTCTCCCAGCCCCGCGCTAACCACAGGCTGCAAGCATCCTGGCTGCGGTGCTGATGGAGACGTGGCGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCCAGGGGCTCCGGGTaGGGGTCCTCCTGGGACTGC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSRGSG*GSSWDC Trigger: GCAGTCCCAGGAGGACCCTCACCCGGAGCCCCTGGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCCAGGGGCTCCGGGTaGGGGTCCTCCTGGGACTGC | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSRGSG*GSSWDC Trigger: GCAGTCCCAGGAGGACCCTCACCCGGAGCCCCTGGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACGCTGCTCTTTGAGCTaGGCTTCCAGGCGAGCCCGC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLRCSLS*ASRRAR Trigger: GCGGGCTCGCCTGGAAGCTCAGCTCAAAGAGCAGCG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAGGGTCCTCCTGGGACTaGTGCACAGACGGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLGSSWD*CTDGPP Trigger: AGGAGGGCCGTCTGTGCAGCAGTCCCAGGAGGACCC...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGGGTCCTCCTGGGACTaGTGCACAGACGGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTGSSWD*CTDGPP Trigger: AGGAGGGCCGTCTGTGCAGCAGTCCCAGGAGGACCC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAGGAAGTGCTCCACCTaGAAGGAGTGGGGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLRKCST*KEWGWW Trigger: CCACCACCCCCACTCCTTTCAGGTGGAGCACTTCCT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCAGGAAGTGCTCCACCTaGAAGGAGTGGGGGTGGTGG | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTRKCST*KEWGWW Trigger: CCACCACCCCCACTCCTTTCAGGTGGAGCACTTCCT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCTCCCGCTGCTCTTTaGGCTGAGCTTCCAGGCGAG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSPAAL*AELPGE Trigger: CTCGCCTGGAAGCTCAGCTCAAAGAGCAGCGGGAGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGACCACCTCCAGGAGCTaGTTGAGGGCGCGGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWTTSRS*LRARLL Trigger: CAGGAGCCGCGCCCTCAAGCAGCTCCTGGAGGTGGT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | TCACTGATGCGGGTGGCGGTGCCTGGCCCACAACCGTaGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTA | + |
Preference number: 4 (lower is better) Translates to: SLMRVAVPGPQP*SSPVCFPTPFL Trigger: TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCACCGCCACCCGCATCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGGTGCAGAATGGACATaGAGTGGGGGTAGGCTTCGC | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTGAEWT*SGGRLR Trigger: GCGAAGCCTACCCCCACTTCATGTCCATTCTGCACC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCTGCGCCGTGAGGTCTaGCACCTGCTGCTTAACTTG | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTLRREV*HLLLNL Trigger: CAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCCACTCCGGCTCCCTaGCTCAGCACTGCATTGATG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSTPAP*LSTALM Trigger: CATCAATGCAGTGCTGAGCCAGGGAGCCGGAGTGGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCTCCCGCTGCTCTTTaGGCTGAGCTTCCAGGCGAG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSPAAL*AELPGE Trigger: CTCGCCTGGAAGCTCAGCTCAAAGAGCAGCGGGAGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCCCGAAGAACTCATCTaGCTGGATCTTGCCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTPEELI*LDLASL Trigger: GAGGCTGGCAAGATCCAGCCAGATGAGTTCTTCGGG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAGGGTCCTCCTGGGACTaGTGCACAGACGGCCCTCCT | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVGSSWD*CTDGPP Trigger: AGGAGGGCCGTCTGTGCAGCAGTCCCAGGAGGACCC...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACATCTGGCTGGATCTTaGCAGCCTCTTCCCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLHLAGS*QPLPQS Trigger: ACTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCATCTGGCTGGATCTTaGCAGCCTCTTCCCCAAAGT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTHLAGS*QPLPQS Trigger: ACTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCCACTCCGGCTCCCTaGCTCAGCACTGCATTGATG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSTPAP*LSTALM Trigger: CATCAATGCAGTGCTGAGCCAGGGAGCCGGAGTGGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGGAAGCGGTCAGCCTTaGCCATCCGATCCAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWGSGQP*PSDPAH Trigger: ATGAGCTGGATCGGATGGCCAAGGCTGACCGCTTCC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAGCCAGGGTGATGAACTaGCTGACAACAGACACGAAC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLARVMN*LTTDTN Trigger: GTTCGTGTCTGTTGTCAGCCAGTTCATCACCCTGGC...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | ACCGTCCCTGAAAACACCGTGGAGAATGTGAACTCCTaGGTGGGCAGGGACTCTGTCTTGCTTACCACTACA | + |
Preference number: 4 (lower is better) Translates to: TVPENTVENVNS*VGRDSVLLTTT Trigger: TGTAGTGGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTTTTCAGGGACGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCAACAGCAGCCAGTACTaGACTGTGTTACCACTCCTC | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTNSSQY*TVLPLL Trigger: GAGGAGTGGTAACACAGTTCAGTACTGGCTGCTGTT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAGCAACTTGGACCAGTTaGAGGATTTCAGGGCATTGG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLATWTS*RISGHW Trigger: CCAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGC...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGCAACTTGGACCAGTTaGAGGATTTCAGGGCATTGG | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTATWTS*RISGHW Trigger: CCAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCGCTGCTCTTTGAGCTaGGCTTCCAGGCGAGCCCGC | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHRCSLS*ASRRAR Trigger: GCGGGCTCGCCTGGAAGCTCAGCTCAAAGAGCAGCG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAACCACCTCCAGGAGCTaGTTGAGGGCGCGGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTTTSRS*LRARLL Trigger: CAGGAGCCGCGCCCTCAAGCAGCTCCTGGAGGTGGT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAAGAACTCATCTGGCTaGATCTTGCCAGCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLKNSSG*ILPASS Trigger: GGAAGAGGCTGGCAAGATCCAGCCAGATGAGTTCTT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCCCGAAGAACTCATCTaGCTGGATCTTGCCAGCCTC | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWPEELI*LDLASL Trigger: GAGGCTGGCAAGATCCAGCCAGATGAGTTCTTCGGG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCTTCACTGCTCTCCTTaGCCTTCCTCACCTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWLHCSP*PSSPSA Trigger: AGCGGAAGGTGAGGAAGGCCAAGGAGAGCAGTGAAG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACCCTGTGTTTGTCTGTaGGGTCAAGTTCATCCACAA | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLPCVCL*GQVHPQ Trigger: TTGTGGATGAACTTGACCTCACAGACAAACACAGGG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAGGCCATCCAAGTCGATaGATCTGGTTACAAACCTCA | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLGHPSR*IWLQTS Trigger: TGAGGTTTGTAACCAGATTCATCGACTTGGATGGCC...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGTCAGCTCAAACATCTaGGTGGCGCTTTTTGTGTCT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTVSSNI*VALFVS Trigger: AGACACAAAAAGCGCCACTCAGATGTTTGAGCTGAC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAGGATGTTGCAATTCTaGGCTCTCCGACCATCAATC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLRMLQF*ALRPSI Trigger: GATTGATGGTCGGAGAGCTCAGAATTGCAACATCCT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATCTCCCGCTGCTCTTTaGGCTGAGCTTCCAGGCGAG | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVSPAAL*AELPGE Trigger: CTCGCCTGGAAGCTCAGCTCAAAGAGCAGCGGGAGA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTTCTCTGCTGGAAGTaGAAACATGGCTTCCCTGTG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLFLCWK*KHGFPV Trigger: CACAGGGAAGCCATGTTTGCACTTCCAGCAGAGAAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTCCCTGGCTCAGCACTaGATTGATGAAGGACATGAT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTSLAQH*IDEGHD Trigger: ATCATGTCCTTCATCAATGCAGTGCTGAGCCAGGGA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCCCTGGCTCAGCACTaGATTGATGAAGGACATGAT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSLAQH*IDEGHD Trigger: ATCATGTCCTTCATCAATGCAGTGCTGAGCCAGGGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCATCTGGAGGCAATGGTaGAGAATGGACATGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTIWRQW*RMDMKW Trigger: CCACTTCATGTCCATTCTGCACCATTGCCTCCAGAT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAATCTGGAGGCAATGGTaGAGAATGGACATGAAGTGG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLIWRQW*RMDMKW Trigger: CCACTTCATGTCCATTCTGCACCATTGCCTCCAGAT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAACCTGCTGCTTAACTTaGTTGTGCTCAGTTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLTCCLT*LCSVVS Trigger: GGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTTGGGCTTCACTTCTaGCACACGCTCTGCAAACTT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLFGLHF*HTLCKL Trigger: AAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAGGGCATTGGTGGGCTaGGGAATATTCTTCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLRALVG*GIFFFL Trigger: CAAGAAGAAGAATATTCCCCAGCCCACCAATGCCCT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCAGGATTTCAGGGCATTaGTGGGCTGGGGAATATTCT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTRISGH*WAGEYS Trigger: AGAATATTCCCCAGCCCACCAATGCCCTGAAATCCT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCTTGTCTCCAGGCTGTaGGGGCTGAGACTTCTGATA | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWLVSRL*GLRLLI Trigger: TATCAGAAGTCTCAGCCCCCACAGCCTGGAGACAAG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAATTAAGTTTTGTGATTaGTCGCTCCCGGCTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLIKFCD*SLPAAV Trigger: GACAGCAGCCGGGAGCGACCAATCACAAAACTTAAT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | GATTCTAAGAGGGGCAAGGGGACATGCGACACAGACTaGCTCTCTGTTGTGAGTCTCTCTCCACAGTTCCAA | + |
Preference number: 4 (lower is better) Translates to: DSKRGKGTCDTD*LSVVSLSPQFQ Trigger: TTGGAACTGTGGAGAGAGACTCACAACAGAGAGCAAGTCTGTGTCGCATGTCCCCTTGCCCCTCTTAGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGCCGGCTCCATTGTCTaGAGTGCAAAGTTGCTATCA | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWAGSIV*SAKLLS Trigger: TGATAGCAACTTTGCACTTCAGACAATGGAGCCGGC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCCTTTATACAGCCAATaGGGGAGGTGTGTATCCGAG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWPLYSQ*GRCVSE Trigger: CTCGGATACACACCTCCCTCATTGGCTGTATAAAGG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGCAACTTGGACCAGTTaGAGGATTTCAGGGCATTGG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWATWTS*RISGHW Trigger: CCAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAACTCTTCGCTTAGGTTaGGGACTTTGGGGTACTTAT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLTLRLG*GLWGTY Trigger: ATAAGTACCCCAAAGTCCTCAACCTAAGCGAAGAGT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCACTCTTCGCTTAGGTTaGGGACTTTGGGGTACTTAT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTTLRLG*GLWGTY Trigger: ATAAGTACCCCAAAGTCCTCAACCTAAGCGAAGAGT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAAGATCTTCAACATCTaGGAAGCTGAAGCTAGCCAG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLKIFNI*EAEASQ Trigger: CTGGCTAGCTTCAGCTTCTCAGATGTTGAAGATCTT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGGGCTTGGTTCTCAGTaGTGTCTTCAGACTCTCGAT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWGLGSQ*CLQTLD Trigger: ATCGAGAGTCTGAAGACAGCACTGAGAACCAAGCCC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGTGGAGTCGGGATCCTaGCCTTTGTCATTCTGGATA | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWVESGS*PLSFWI Trigger: TATCCAGAATGACAAAGGGCAGGATCCCGACTCCAC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCTGCGCCGTGAGGTCTaGCACCTGCTGCTTAACTTG | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQLRREV*HLLLNL Trigger: CAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGGCATCTGGAGGCAATaGTGCAGAATGGACATGAAG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWGIWRQ*CRMDMK Trigger: CTTCATGTCCATTCTGCACCATTGCCTCCAGATGCC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCATTTCAGGGCATTGGTaGGCTGGGGAATATTCTTCT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTISGHW*AGEYSS Trigger: AGAAGAATATTCCCCAGCCCACCAATGCCCTGAAAT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAGGAAGCGGTCAGCCTTaGCCATCCGATCCAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVGSGQP*PSDPAH Trigger: ATGAGCTGGATCGGATGGCCAAGGCTGACCGCTTCC...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGAAGAACTCATCTGGCTaGATCTTGCCAGCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWKNSSG*ILPASS Trigger: GGAAGAGGCTGGCAAGATCCAGCCAGATGAGTTCTT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | GAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTaGCTTACCACTACAGCTCTACTATGCCTGGTACAT | + |
Preference number: 4 (lower is better) Translates to: ENVNSLVGRDSV*LTTTALLCLVH Trigger: ATGTACCAGGCATAGTAGAGCTGTAGTGGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGGTGCAGAATGGACATaGAGTGGGGGTAGGCTTCGC | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHGAEWT*SGGRLR Trigger: GCGAAGCCTACCCCCACTTCATGTCCATTCTGCACC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGTTTCCGGTTCCGTTTaGGTTTTGAAAGGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTVSGSV*VLKGLC Trigger: ACAAAGACCTTTCAAAACTCAAACGGAACCGGAAAC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACCTGGTCCTTTTTCTTaGTACAGTATATCTGCCACT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLPGPFS*YSISAT Trigger: AGTGGCAGATATACTGTAGCAAGAAAAAGGACCAGG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCTCATCTTCTCTGCCTaGTCTTTCCATTGCTTAACT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTLIFSA*SFHCLT Trigger: AGTTAAGCAATGGAAAGAGCAGGCAGAGAAGATGAG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACTCATCTTCTCTGCCTaGTCTTTCCATTGCTTAACT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLLIFSA*SFHCLT Trigger: AGTTAAGCAATGGAAAGAGCAGGCAGAGAAGATGAG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATGCTTAACTTGCTTGTaGTCAGTTGTCTCCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLCLTCL*SVVSFS Trigger: GGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTGCTTAACTTGCTTGTaGTCAGTTGTCTCCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTCLTCL*SVVSFS Trigger: GGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACTGCGCCGTGAGGTCTaGCACCTGCTGCTTAACTTG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTLRREV*HLLLNL Trigger: CAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCATGTTTACTTTCGCTaGTTGAGGAATATCCCGCAA | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTHVYFR*LRNIPQ Trigger: TTGCGGGATATTCCTCAAGCAGCGAAAGTAAACATG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACCCAAAGTGCTTCACTaGTTTAGTGAACAGCTCTTT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLPKVLH*FSEQLF Trigger: AAAGAGCTGTTCACTAAAGCAGTGAAGCACTTTGGG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTGAAC | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWASSPK*FTALVN Trigger: GTTCACTAAAGCAGTGAAGCACTTTGGGGAAGAGGC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGGAAGCGGTCAGCCTTaGCCATCCGATCCAGCTCAT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHGSGQP*PSDPAH Trigger: ATGAGCTGGATCGGATGGCCAAGGCTGACCGCTTCC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCTGAGCAATTACATTaGTACTCTCAGAATGAGCCA | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSEQLH*YSQNEP Trigger: TGGCTCATTCTGAGAGTATCAATGTAATTGCTCAGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTCTGAGCAATTACATTaGTACTCTCAGAATGAGCCA | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTSEQLH*YSQNEP Trigger: TGGCTCATTCTGAGAGTATCAATGTAATTGCTCAGA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACTTTTTGAAGTACAGTaGTTGCAGTCTTTGCTGGTA | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLLFEVQ*LQSLLV Trigger: TACCAGCAAAGACTGCAATCACTGTACTTCAAAAAG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTGTTGTAGCTCATTGTaGTCTTTCCTCATCTTCTCT | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTCCSSL*SFLIFS Trigger: AGAGAAGATGAGGAAAGAGCACAATGAGCTACAACA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCTCCACTCTCTTCACTaGTCTCCTTGGCCTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQLHSLH*SPWPSS Trigger: TGAGGAAGGCCAAGGAGAGCAGTGAAGAGAGTGGAG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTGCCCTTTGTCATTCTaGATAACTATCTGCTGTATG | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTCPLSF*ITICCM Trigger: CATACAGCAGATAGTTATCCAGAATGACAAAGGGCA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGATTTCAGGGCATTGGTaGGCTGGGGAATATTCTTCT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWISGHW*AGEYSS Trigger: AGAAGAATATTCCCCAGCCCACCAATGCCCTGAAAT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCTTGTCTCCAGGCTGTaGGGGCTGAGACTTCTGATA | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQLVSRL*GLRLLI Trigger: TATCAGAAGTCTCAGCCCCCACAGCCTGGAGACAAG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAGCCAGGGTGATGAACTaGCTGACAACAGACACGAAC | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVARVMN*LTTDTN Trigger: GTTCGTGTCTGTTGTCAGCCAGTTCATCACCCTGGC...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCTTCACTGCTCTCCTTaGCCTTCCTCACCTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHLHCSP*PSSPSA Trigger: AGCGGAAGGTGAGGAAGGCCAAGGAGAGCAGTGAAG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGACAGCAAAAGATAAATaGAATCCCCCGGCCGCCTCT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQTAKDK*NPPAAS Trigger: AGAGGCGGCCGGGGGATTTCATTTATCTTTTGCTGT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAGCCGGCTCCATTGTCTaGAGTGCAAAGTTGCTATCA | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVAGSIV*SAKLLS Trigger: TGATAGCAACTTTGCACTTCAGACAATGGAGCCGGC...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGCCGGCTCCATTGTCTaGAGTGCAAAGTTGCTATCA | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQAGSIV*SAKLLS Trigger: TGATAGCAACTTTGCACTTCAGACAATGGAGCCGGC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTACCTTTATACAGCCAATaGGGGAGGTGTGTATCCGAG | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVPLYSQ*GRCVSE Trigger: CTCGGATACACACCTCCCTCATTGGCTGTATAAAGG...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAAGCGAAGATGGAGCCTaGAGTCCAAACTCTCCACTC | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSEDGA*SPNSPL Trigger: GAGTGGAGAGTTTGGACTTCAGGCTCCATCTTCGCT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGAACAGCAGCCAGTACTaGACTGTGTTACCACTCCTC | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQNSSQY*TVLPLL Trigger: GAGGAGTGGTAACACAGTTCAGTACTGGCTGCTGTT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCCTGGTCCTTTTTCTTaGTACAGTATATCTGCCACT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWPGPFS*YSISAT Trigger: AGTGGCAGATATACTGTAGCAAGAAAAAGGACCAGG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGTGGAGTCGGGATCCTaGCCTTTGTCATTCTGGATA | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQVESGS*PLSFWI Trigger: TATCCAGAATGACAAAGGGCAGGATCCCGACTCCAC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTGCTTAACTTGCTTGTaGTCAGTTGTCTCCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWCLTCL*SVVSFS Trigger: GGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGTCATCAATGGCATCTaGTTCTTTCTGCTTGGAGTT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWVINGI*FFLLGV Trigger: AACTCCAAGCAGAAAGAAGCAGATGCCATTGATGAC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACTCCACTCTCTTCACTaGTCTCCTTGGCCTTCCTCA | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTLHSLH*SPWPSS Trigger: TGAGGAAGGCCAAGGAGAGCAGTGAAGAGAGTGGAG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATATGTGATTTCTGGATaGTCATTGTTTCGGAAACAG | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLYVISG*SLFRKQ Trigger: CTGTTTCCGAAACAATGACCATCCAGAAATCACATA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGGGTTAGCCTCCTCCTaGTCAGCTCAAACATCTGAG | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHGLASS*SAQTSE Trigger: CTCAGATGTTTGAGCTGACCAGGAGGAGGCTAACCC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGGCATCTGGAGGCAATaGTGCAGAATGGACATGAAG | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQGIWRQ*CRMDMK Trigger: CTTCATGTCCATTCTGCACCATTGCCTCCAGATGCC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAATTTCTTCCTTCTCTTaGGTCTTAGCATCACATTCT | + |
Preference number: 4 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLISSFS*VLASHS Trigger: AGAATGTGATGCTAAGACCCAAGAGAAGGAAGAAAT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCTTGTCTCCAGGCTGTaGGGGCTGAGACTTCTGATA | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHLVSRL*GLRLLI Trigger: TATCAGAAGTCTCAGCCCCCACAGCCTGGAGACAAG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGCCAGGGTGATGAACTaGCTGACAACAGACACGAAC | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHARVMN*LTTDTN Trigger: GTTCGTGTCTGTTGTCAGCCAGTTCATCACCCTGGC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATACAGCAAAAGATAAATaGAATCCCCCGGCCGCCTCT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHTAKDK*NPPAAS Trigger: AGAGGCGGCCGGGGGATTTCATTTATCTTTTGCTGT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTACCCTGTGTTTGTCTGTaGGGTCAAGTTCATCCACAA | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVPCVCL*GQVHPQ Trigger: TTGTGGATGAACTTGACCTCACAGACAAACACAGGG...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAGGCCATCCAAGTCGATaGATCTGGTTACAAACCTCA | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVGHPSR*IWLQTS Trigger: TGAGGTTTGTAACCAGATTCATCGACTTGGATGGCC...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCTTTATACAGCCAATaGGGGAGGTGTGTATCCGAG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTPLYSQ*GRCVSE Trigger: CTCGGATACACACCTCCCTCATTGGCTGTATAAAGG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGTCAGCTCAAACATCTaGGTGGCGCTTTTTGTGTCT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQVSSNI*VALFVS Trigger: AGACACAAAAAGCGCCACTCAGATGTTTGAGCTGAC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAAACAGCAGCCAGTACTaGACTGTGTTACCACTCCTC | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTNSSQY*TVLPLL Trigger: GAGGAGTGGTAACACAGTTCAGTACTGGCTGCTGTT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGAATATTCTTCTTCTTaGGTGTTAGACTCACTGGAG | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWEYSSS*VLDSLE Trigger: CTCCAGTGAGTCTAACACTCAAGAAGAAGAATATTC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAAGGATGTTGCAATTCTaGGCTCTCCGACCATCAATC | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVRMLQF*ALRPSI Trigger: GATTGATGGTCGGAGAGCTCAGAATTGCAACATCCT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCTTTTTGAAGTACAGTaGTTGCAGTCTTTGCTGGTA | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWLFEVQ*LQSLLV Trigger: TACCAGCAAAGACTGCAATCACTGTACTTCAAAAAG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTTGCTACAGTATATCTaGCACTTTTTCTCTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWLLQYI*HFFSAG Trigger: TCCAGCAGAGAAAAAGTGGCAGATATACTGTAGCAA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGGGCTTGGTTCTCAGTaGTGTCTTCAGACTCTCGAT | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTGLGSQ*CLQTLD Trigger: ATCGAGAGTCTGAAGACAGCACTGAGAACCAAGCCC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTTCTGGATAACTATCTaGTGTATGATTCTGTCTAAC | + |
Preference number: 4 (lower is better) Translates to: NTVENVNSLVGRDSVLLTFWITI*CMILSN Trigger: GTTAGACAGAATCATACAGCAGATAGTTATCCAGAA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGTGGAGTCGGGATCCTaGCCTTTGTCATTCTGGATA | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTVESGS*PLSFWI Trigger: TATCCAGAATGACAAAGGGCAGGATCCCGACTCCAC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGACCTGCTGCTTAACTTaGTTGTGCTCAGTTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQTCCLT*LCSVVS Trigger: GGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAACCTGCTGCTTAACTTaGTTGTGCTCAGTTGTCTCC | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVTCCLT*LCSVVS Trigger: GGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATCGACAGAAGGATGTTaGAATTCTGAGCTCTCCGAC | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVSTEGC*NSELSD Trigger: GTCGGAGAGCTCAGAATTGCAACATCCTTCTGTCGA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTTCTGCCACACGCTCTaGAAACTTCTTTTTGAAGTA | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWFCHTL*KLLFEV Trigger: TACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATTTGGGCTTCACTTCTaGCACACGCTCTGCAAACTT | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVFGLHF*HTLCKL Trigger: AAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGAGGGCATTGGTGGGCTaGGGAATATTCTTCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQRALVG*GIFFFL Trigger: CAAGAAGAAGAATATTCCCCAGCCCACCAATGCCCT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATAAGAACTCATCTGGCTaGATCTTGCCAGCCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHKNSSG*ILPASS Trigger: GGAAGAGGCTGGCAAGATCCAGCCAGATGAGTTCTT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCCCTGTGTTTGTCTGTaGGGTCAAGTTCATCCACAA | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHPCVCL*GQVHPQ Trigger: TTGTGGATGAACTTGACCTCACAGACAAACACAGGG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGGCCATCCAAGTCGATaGATCTGGTTACAAACCTCA | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTGHPSR*IWLQTS Trigger: TGAGGTTTGTAACCAGATTCATCGACTTGGATGGCC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGTCAGCTCAAACATCTaGGTGGCGCTTTTTGTGTCT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHVSSNI*VALFVS Trigger: AGACACAAAAAGCGCCACTCAGATGTTTGAGCTGAC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAAGGATGTTGCAATTCTaGGCTCTCCGACCATCAATC | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTRMLQF*ALRPSI Trigger: GATTGATGGTCGGAGAGCTCAGAATTGCAACATCCT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGTTTACTTTCGCTGCTTaGGGAATATCCCGCAACTCT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQFTFAA*GISRNS Trigger: AGAGTTGCGGGATATTCCTCAAGCAGCGAAAGTAAA...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAAAGATCTTCAACATCTaGGAAGCTGAAGCTAGCCAG | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVKIFNI*EAEASQ Trigger: CTGGCTAGCTTCAGCTTCTCAGATGTTGAAGATCTT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTTTCTCTGCTGGAAGTaGAAACATGGCTTCCCTGTG | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHFLCWK*KHGFPV Trigger: CACAGGGAAGCCATGTTTGCACTTCCAGCAGAGAAA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATCCCTGGCTCAGCACTaGATTGATGAAGGACATGAT | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSLAQH*IDEGHD Trigger: ATCATGTCCTTCATCAATGCAGTGCTGAGCCAGGGA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATCGACAGAAGGATGTTaGAATTCTGAGCTCTCCGAC | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSTEGC*NSELSD Trigger: GTCGGAGAGCTCAGAATTGCAACATCCTTCTGTCGA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATTTGGGCTTCACTTCTaGCACACGCTCTGCAAACTT | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTFGLHF*HTLCKL Trigger: AAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGATCTTGAATCCATATaGATTGCCTCTTTGTCCTTT | + |
Preference number: 4 (lower is better) Translates to: RFLSTMHIGILPSLKTPWDLESI*IASLSF Trigger: AAAGGACAAAGAGGCAATGCATATGGATTCAAGATC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTGAAC | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHASSPK*FTALVN Trigger: GTTCACTAAAGCAGTGAAGCACTTTGGGGAAGAGGC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTGAAC | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTASSPK*FTALVN Trigger: GTTCACTAAAGCAGTGAAGCACTTTGGGGAAGAGGC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAAGGGCATTGGTGGGCTaGGGAATATTCTTCTTCTTG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTRALVG*GIFFFL Trigger: CAAGAAGAAGAATATTCCCCAGCCCACCAATGCCCT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGATTTCAGGGCATTGGTaGGCTGGGGAATATTCTTCT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQISGHW*AGEYSS Trigger: AGAAGAATATTCCCCAGCCCACCAATGCCCTGAAAT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATAGGATTTCAGGGCATTaGTGGGCTGGGGAATATTCT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHRISGH*WAGEYS Trigger: AGAATATTCCCCAGCCCACCAATGCCCTGAAATCCT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | CACACCTTCACTCACAGAGGAGAGAAGAAATTGCCATaGTTTTGGATCGCAAGGCAGTGTAATGGAAAGTTC | + |
Preference number: 4 (lower is better) Translates to: HTFTHRGEKKLP*FWIARQCNGKF Trigger: GAACTTTCCATTACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGAAGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
3UTR CAA 72 bp | CACATTCACACCTTCACTCACAGAGGAGAGAAGAAATaGCCATTGTTTTGGATCGCAAGGCAGTGTAATGGA | + |
Preference number: 4 (lower is better) Translates to: HIHTFTHRGEKK*PLFWIARQCNG Trigger: TCCATTACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGAAGGTGTGAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATCTGTGCTCAGACTCTaGGCAATTACATTGATACTC | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVSVLRL*AITLIL Trigger: GAGTATCAATGTAATTGCTCAGAGTCTGAGCACAGA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGTCTGTGCTCAGACTCTaGGCAATTACATTGATACTC | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQSVLRL*AITLIL Trigger: GAGTATCAATGTAATTGCTCAGAGTCTGAGCACAGA...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATACTCTTCGCTTAGGTTaGGGACTTTGGGGTACTTAT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHTLRLG*GLWGTY Trigger: ATAAGTACCCCAAAGTCCTCAACCTAAGCGAAGAGT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTTTACTTTCGCTGCTTaGGGAATATCCCGCAACTCT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHFTFAA*GISRNS Trigger: AGAGTTGCGGGATATTCCTCAAGCAGCGAAAGTAAA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCCTGGTCCTTTTTCTTaGTACAGTATATCTGCCACT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQPGPFS*YSISAT Trigger: AGTGGCAGATATACTGTAGCAAGAAAAAGGACCAGG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGTCATCAATGGCATCTaGTTCTTTCTGCTTGGAGTT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQVINGI*FFLLGV Trigger: AACTCCAAGCAGAAAGAAGCAGATGCCATTGATGAC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCATGTTTACTTTCGCTaGTTGAGGAATATCCCGCAA | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQHVYFR*LRNIPQ Trigger: TTGCGGGATATTCCTCAAGCAGCGAAAGTAAACATG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAAAAGTTGAGAATACATaGCAGGCCATCCAAGTCGAT | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTKVENT*QAIQVD Trigger: ATCGACTTGGATGGCCTGTCATGTATTCTCAACTTT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATAAAGTTGAGAATACATaGCAGGCCATCCAAGTCGAT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHKVENT*QAIQVD Trigger: ATCGACTTGGATGGCCTGTCATGTATTCTCAACTTT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGTTTCCGGTTCCGTTTaGGTTTTGAAAGGTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHVSGSV*VLKGLC Trigger: ACAAAGACCTTTCAAAACTCAAACGGAACCGGAAAC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATTGCTACAGTATATCTaGCACTTTTTCTCTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVLLQYI*HFFSAG Trigger: TCCAGCAGAGAAAAAGTGGCAGATATACTGTAGCAA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACTCATCTTCTCTGCCTaGTCTTTCCATTGCTTAACT | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTLIFSA*SFHCLT Trigger: AGTTAAGCAATGGAAAGAGCAGGCAGAGAAGATGAG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGTGTTGTAGCTCATTGTaGTCTTTCCTCATCTTCTCT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQCCSSL*SFLIFS Trigger: AGAGAAGATGAGGAAAGAGCACAATGAGCTACAACA...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATTCTGCCACACGCTCTaGAAACTTCTTTTTGAAGTA | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVFCHTL*KLLFEV Trigger: TACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACATGTTTACTTTCGCTaGTTGAGGAATATCCCGCAA | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTHVYFR*LRNIPQ Trigger: TTGCGGGATATTCCTCAAGCAGCGAAAGTAAACATG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCCAAAGTGCTTCACTaGTTTAGTGAACAGCTCTTT | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTPKVLH*FSEQLF Trigger: AAAGAGCTGTTCACTAAAGCAGTGAAGCACTTTGGG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATCTGAGCAATTACATTaGTACTCTCAGAATGAGCCA | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSEQLH*YSQNEP Trigger: TGGCTCATTCTGAGAGTATCAATGTAATTGCTCAGA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGAATATTCTTCTTCTTaGGTGTTAGACTCACTGGAG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTEYSSS*VLDSLE Trigger: CTCCAGTGAGTCTAACACTCAAGAAGAAGAATATTC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR TCA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCTTTTTGAAGTACAGTaGTTGCAGTCTTTGCTGGTA | + |
Preference number: 4 (lower is better) Translates to: IPYNLRILGAGRSVVSVHLFEVQ*LQSLLV Trigger: TACCAGCAAAGACTGCAATCACTGTACTTCAAAAAG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATTGCTACAGTATATCTaGCACTTTTTCTCTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTLLQYI*HFFSAG Trigger: TCCAGCAGAGAAAAAGTGGCAGATATACTGTAGCAA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAGATCTTGAATCCATATaGATTGCCTCTTTGTCCTTT | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVDLESI*IASLSF Trigger: AAAGGACAAAGAGGCAATGCATATGGATTCAAGATC...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATGCCCTTTGTCATTCTaGATAACTATCTGCTGTATG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTCPLSF*ITICCM Trigger: CATACAGCAGATAGTTATCCAGAATGACAAAGGGCA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGATTTCTTCCTTCTCTTaGGTCTTAGCATCACATTCT | + |
Preference number: 4 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQISSFS*VLASHS Trigger: AGAATGTGATGCTAAGACCCAAGAGAAGGAAGAAAT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAATTTCTTCCTTCTCTTaGGTCTTAGCATCACATTCT | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVISSFS*VLASHS Trigger: AGAATGTGATGCTAAGACCCAAGAGAAGGAAGAAAT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATTCTGGATAACTATCTaGTGTATGATTCTGTCTAAC | + |
Preference number: 4 (lower is better) Translates to: SLTEERRNCHCFGSQGSVFWITI*CMILSN Trigger: GTTAGACAGAATCATACAGCAGATAGTTATCCAGAA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATATGTGATTTCTGGATaGTCATTGTTTCGGAAACAG | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTYVISG*SLFRKQ Trigger: CTGTTTCCGAAACAATGACCATCCAGAAATCACATA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR GCA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATTCTGGATAACTATCTaGTGTATGATTCTGTCTAAC | + |
Preference number: 4 (lower is better) Translates to: IVRFLSTMHIGILPSLKTFWITI*CMILSN Trigger: GTTAGACAGAATCATACAGCAGATAGTTATCCAGAA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | TCTCCTTGGCCTTCCTCACCTTCCGCTCCCTCTCCCGCTGCTCTTTaGGCTGAGCTTCCAGGCGAGCCCGCCGTTCCTCCTCCTCCTTCC | + |
Preference number: 5 (lower is better) Translates to: SPWPSSPSAPSPAAL*AELPGEPAVPPPPS Trigger: GGAAGGAGGAGGAGGAACGGCGGGCTCGCCTGGAAGCTCAGCTCAAAGAGCAGCGGGAGAGGGAGCGGAAGGTGAGGAAGGCCAAGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | CCTGGGACTGCTGCACAGACGGCCCTCCTGTTCAGCTCGTGGAGCTaGGCCGTGAGGTCTGCCACCTGCTGCTTAACTTGCTTGTGCTCA | + |
Preference number: 5 (lower is better) Translates to: PGTAAQTALLFSSWS*AVRSATCCLTCLCS Trigger: TGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAGGGCCGTCTGTGCAGCAGTCCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | GCCCTCCTGTTCAGCTCGTGGAGCTGCGCCGTGAGGTCTGCCACCTaGTGCTTAACTTGCTTGTGCTCAGTTGTCTCCTTTTCCAGCTTC | + |
Preference number: 5 (lower is better) Translates to: ALLFSSWSCAVRSAT*CLTCLCSVVSFSSF Trigger: GAAGCTGGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | ACAGACGGCCCTCCTGTTCAGCTCGTGGAGCTGCGCCGTGAGGTCTaGCACCTGCTGCTTAACTTGCTTGTGCTCAGTTGTCTCCTTTTC | + |
Preference number: 5 (lower is better) Translates to: TDGPPVQLVELRREV*HLLLNLLVLSCLLF Trigger: GAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAGGGCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | CACTCCTCTTGTAAGGCATCTGGAGGCAATGGTGCAGAATGGACATaGAGTGGGGGTAGGCTTCGCTGTGGGTTAGCCTCCTCCTGGTCA | + |
Preference number: 5 (lower is better) Translates to: HSSCKASGGNGAEWT*SGGRLRCGLASSWS Trigger: TGACCAGGAGGAGGCTAACCCACAGCGAAGCCTACCCCCACTTCATGTCCATTCTGCACCATTGCCTCCAGATGCCTTACAAGAGGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | CTCCTGTTCAGCTCGTGGAGCTGCGCCGTGAGGTCTGCCACCTGCTaGTTAACTTGCTTGTGCTCAGTTGTCTCCTTTTCCAGCTTCTCT | + |
Preference number: 5 (lower is better) Translates to: LLFSSWSCAVRSATC*LTCLCSVVSFSSFS Trigger: AGAGAAGCTGGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAACAACAGACACGAACTaGTCTCCAGGCTGTGGGGGC | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLTTDTN*SPGCGG Trigger: GCCCCCACAGCCTGGAGACAAGTTCGTGTCTGTTGT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | GGCTGCTGTCCGTCACCTGGTTGGAAATGCGTTTCCGGTTCCGTTTaGGTTTTGAAAGGTCTTTGTCGAACACCTCTCCTGAGCGCAGCG | + |
Preference number: 5 (lower is better) Translates to: GCCPSPGWKCVSGSV*VLKGLCRTPLLSAA Trigger: CGCTGCGCTCAGGAGAGGTGTTCGACAAAGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGGACAGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCATCTGGCTGGATCTaGCCAGCCTCTTCCCCAAAG | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSSGWI*PASSPK Trigger: CTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | TCGAGCTCCTCCACAGGGGGCATGGGCAGCGCCGGCTCCATTGTCTaGAGTGCAAAGTTGCTATCATTCCTAAGCCGATATGTGATTTCT | + |
Preference number: 5 (lower is better) Translates to: SSSSTGGMGSAGSIV*SAKLLSFLSRYVIS Trigger: AGAAATCACATATCGGCTTAGGAATGATAGCAACTTTGCACTTCAGACAATGGAGCCGGCGCTGCCCATGCCCCCTGTGGAGGAGCTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | ACTCCAGCTCCGTCTCTACAGCTTTCAGGCCACTCCTCAGGGTGCTaGTCTCCTTGTCCAGCTCAGTCATGTTTACTTTCGCTGCTTGAG | + |
Preference number: 5 (lower is better) Translates to: TPAPSLQLSGHSSGC*SPCPAQSCLLSLLE Trigger: CTCAAGCAGCGAAAGTAAACATGACTGAGCTGGACAAGGAGATCAGCACCCTGAGGAGTGGCCTGAAAGCTGTAGAGACGGAGCTGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCACTCGGGCCAACTGGTaGCTCCCTTGTTTTCTTCCT | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTTRANW*LPCFLP Trigger: AGGAAGAAAACAAGGGAGCAACCAGTTGGCCCGAGT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGACAACAGACACGAACTaGTCTCCAGGCTGTGGGGGC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWTTDTN*SPGCGG Trigger: GCCCCCACAGCCTGGAGACAAGTTCGTGTCTGTTGT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCACAAACCTCATGGGCTaGGTTCTCAGTGCTGTCTTC | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTTNLMG*VLSAVF Trigger: GAAGACAGCACTGAGAACCAAGCCCATGAGGTTTGT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCGGCAACTTGGACCAGTaGAAGGATTTCAGGGCATTG | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTGNLDQ*KDFRAL Trigger: CAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGCC...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTACGAATCGCTTCTACTTaGGGCTTCACTTCTGCCACA | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLRIAST*GFTSAT Trigger: TGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCG...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCAGGGTGCTGATCTCCTaGTCCAGCTCAGTCATGTTT | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTRVLIS*SSSVMF Trigger: AAACATGACTGAGCTGGACAAGGAGATCAGCACCCT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGACTCGGGCCAACTGGTaGCTCCCTTGTTTTCTTCCT | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWTRANW*LPCFLP Trigger: AGGAAGAAAACAAGGGAGCAACCAGTTGGCCCGAGT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTGGTATCCGCTATCTaGTTGAGGCTGGAGATCTTG | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLLVSAI*LRLEIL Trigger: CAAGATCTCCAGCCTCAACAAGATAGCGGATACCAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTTGGTATCCGCTATCTaGTTGAGGCTGGAGATCTTG | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTLVSAI*LRLEIL Trigger: CAAGATCTCCAGCCTCAACAAGATAGCGGATACCAA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | CAGGTTGAATTCCTAACATCAGAAATTCATAGCGAAGATGGAGCCTaGAGTCCAAACTCTCCACTCCGGCTCCCTGGCTCAGCACTGCAT | + |
Preference number: 5 (lower is better) Translates to: QVEFLTSEIHSEDGA*SPNSPLRLPGSALH Trigger: ATGCAGTGCTGAGCCAGGGAGCCGGAGTGGAGAGTTTGGACTTCAGGCTCCATCTTCGCTATGAATTTCTGATGTTAGGAATTCAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCCTGGTCCTTTTTCTaGCTACAGTATATCTGCCAC | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSWSFF*LQYICH Trigger: GTGGCAGATATACTGTAGCAAGAAAAAGGACCAGGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGACAAACCTCATGGGCTaGGTTCTCAGTGCTGTCTTC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWTNLMG*VLSAVF Trigger: GAAGACAGCACTGAGAACCAAGCCCATGAGGTTTGT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTCTGAGTGGCGCTTTTaGTGTCTATGTGAACCAGTT | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTSEWRF*CLCEPV Trigger: AACTGGTTCACATAGACACAAAAAGCGCCACTCAGA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATGCTGCTTAACTTGCTaGTGCTCAGTTGTCTCCTTT | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLCCLTC*CSVVSF Trigger: AAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGAACTCCTGCTGTCTTaGGTAGGCAGAGAACGTTCT | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWELLLS*VGRERS Trigger: AGAACGTTCTCTGCCTACCAAAGACAGCAGGAGTTC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATCTTTCTGCTTGGAGTaGTTCACAAAGAACTCCTGC | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLSFCLE*FTKNSC Trigger: GCAGGAGTTCTTTGTGAACAACTCCAAGCAGAAAGA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTGAGGCTGGAGATCTaGAATCCATATGCATTGCCT | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLLRLEI*NPYALP Trigger: AGGCAATGCATATGGATTCAAGATCTCCAGCCTCAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGAGGGTGCTGATCTCCTaGTCCAGCTCAGTCATGTTT | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWRVLIS*SSSVMF Trigger: AAACATGACTGAGCTGGACAAGGAGATCAGCACCCT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAACAACAGACACGAACTaGTCTCCAGGCTGTGGGGGC | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVTTDTN*SPGCGG Trigger: GCCCCCACAGCCTGGAGACAAGTTCGTGTCTGTTGT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATCTTCACTGCTCTCCTaGGCCTTCCTCACCTTCCGC | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVSSLLS*AFLTFR Trigger: GCGGAAGGTGAGGAAGGCCAAGGAGAGCAGTGAAGA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCGTTTCCGGTTCCGTTaGAGTTTTGAAAGGTCTTTG | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTRFRFR*SFERSL Trigger: CAAAGACCTTTCAAAACTCAAACGGAACCGGAAACG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | CCGAAGAACTCATCTGGCTGGATCTTGCCAGCCTCTTCCCCAAAGTaGTTCACTGCTTTAGTGAACAGCTCTTTAGCTTCTGCTAGAAGA | + |
Preference number: 5 (lower is better) Translates to: PKNSSGWILPASSPK*FTALVNSSLASARR Trigger: TCTTCTAGCAGAAGCTAAAGAGCTGTTCACTAAAGCAGTGAAGCACTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATGAGTTCTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 90 bp | TCAGGCAACTTGGACCAGTTGAAGGATTTCAGGGCATTGGTGGGCTaGGGAATATTCTTCTTCTTGAGTGTTAGACTCACTGGAGCACCA | + |
Preference number: 5 (lower is better) Translates to: SGNLDQLKDFRALVG*GIFFFLSVRLTGAP Trigger: TGGTGCTCCAGTGAGTCTAACACTCAAGAAGAAGAATATTCCCCAGCCCACCAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCGGGATCCTGCCCTTaGTCATTCTGGATAACTATC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSGSCP*SFWITI Trigger: GATAGTTATCCAGAATGACAAAGGGCAGGATCCCGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTCTGTTGTAGCTCATaGTGCTCTTTCCTCATCTTC | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLFCCSS*CSFLIF Trigger: GAAGATGAGGAAAGAGCACAATGAGCTACAACAGAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGCTTGCTTGTGCTCAGTaGTCTCCTTTTCCAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWLACAQ*SPFPAS Trigger: AGAAGCTGGAAAAGGAGACAACTGAGCACAAGCAAG...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCTCTGCTTCTTTCTGCTaGGAGTTGTTCACAAAGAAC | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTSASFC*ELFTKN Trigger: GTTCTTTGTGAACAACTCCAAGCAGAAAGAAGCAGA...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGTTTACTTTCGCTGCTaGAGGAATATCCCGCAACTC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWVYFRC*RNIPQL Trigger: GAGTTGCGGGATATTCCTCAAGCAGCGAAAGTAAAC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGTCATCTGGCTGGATCTaGCCAGCCTCTTCCCCAAAG | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQSSGWI*PASSPK Trigger: CTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATGA...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATCTTCACTGCTCTCCTaGGCCTTCCTCACCTTCCGC | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSSLLS*AFLTFR Trigger: GCGGAAGGTGAGGAAGGCCAAGGAGAGCAGTGAAGA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | CAAGTCGATGAATCTGGTTACAAACCTCATGGGCTTGGTTCTCAGTaGTGTCTTCAGACTCTCGATGGTTTTACTCCTCTCCTCCTCTTC | + |
Preference number: 5 (lower is better) Translates to: QVDESGYKPHGLGSQ*CLQTLDGFTPLLLF Trigger: GAAGAGGAGGAGAGGAGTAAAACCATCGAGAGTCTGAAGACAGCACTGAGAACCAAGCCCATGAGGTTTGTAACCAGATTCATCGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 90 bp | AAATTAAGTTTTGTGATTGGTCGCTCCCGGCTGCTGTCCGTCACCTaGTTGGAAATGCGTTTCCGGTTCCGTTTGAGTTTTGAAAGGTCT | + |
Preference number: 5 (lower is better) Translates to: KLSFVIGRSRLLSVT*LEMRFRFRLSFERS Trigger: AGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGGACAGCAGCCGGGAGCGACCAATCACAAAACTTAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCCTGGTCCTTTTTCTaGCTACAGTATATCTGCCAC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSWSFF*LQYICH Trigger: GTGGCAGATATACTGTAGCAAGAAAAAGGACCAGGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAACTCGGGCCAACTGGTaGCTCCCTTGTTTTCTTCCT | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVTRANW*LPCFLP Trigger: AGGAAGAAAACAAGGGAGCAACCAGTTGGCCCGAGT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGACTGTTCCATCCAATTaGTTCTCAGGCAACTTGGAC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWTVPSN*FSGNLD Trigger: GTCCAAGTTGCCTGAGAACAAATTGGATGGAACAGT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCATCACTGACAGCTCTTaGACTTTAAGTTTGGAACTC | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTITDSS*TLSLEL Trigger: GAGTTCCAAACTTAAAGTCAAAGAGCTGTCAGTGAT...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | AACACCGTGGAGAATGTGAACTCCTTGGTGGGCAGGGACTCTGTCTTGCTTACCCGCTTGATTTCATCATaGGATAATTTCAACCTCGAC | + |
Preference number: 5 (lower is better) Translates to: NTVENVNSLVGRDSVLLTRLISS*DNFNLD Trigger: GTCGAGGTTGAAATTATCCAATGATGAAATCAAGCG...GGTAAGCAAGACAGAGTCCCTGCCCACCAAGGAGTTCACATTCTCCACGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTTGAGGCTGGAGATCTaGAATCCATATGCATTGCCT | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWLRLEI*NPYALP Trigger: AGGCAATGCATATGGATTCAAGATCTCCAGCCTCAA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTGTCAATACTGGATTaGGTATCCGCTATCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLLSILD*VSAILL Trigger: CAACAAGATAGCGGATACCAAATCCAGTATTGACAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTCATCTGGCTGGATCTaGCCAGCCTCTTCCCCAAAG | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHSSGWI*PASSPK Trigger: CTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATGA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 90 bp | AAGTTTTCCAGAGGTGTGGAGTCGGGATCCTGCCCTTTGTCATTCTaGATAACTATCTGCTGTATGATTCTGTCTAACAGCAGCCAGTAC | + |
Preference number: 5 (lower is better) Translates to: KFSRGVESGSCPLSF*ITICCMILSNSSQY Trigger: GTACTGGCTGCTGTTAGACAGAATCATACAGCAGATAGTTATCCAGAATGACAAAGGGCAGGATCCCGACTCCACACCTCTGGAAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTAACAAACCTCATGGGCTaGGTTCTCAGTGCTGTCTTC | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVTNLMG*VLSAVF Trigger: GAAGACAGCACTGAGAACCAAGCCCATGAGGTTTGT...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAAATGCCTGTCTAGTGTaGAATTTTCATGTTCCCTTA | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLNACLV*NFHVPL Trigger: TAAGGGAACATGAAAATTCAACACTAGACAGGCATT...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTTCTGTTGTAGCTCATaGTGCTCTTTCCTCATCTTC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWFCCSS*CSFLIF Trigger: GAAGATGAGGAAAGAGCACAATGAGCTACAACAGAA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTCTGCTTCTTTCTGCTaGGAGTTGTTCACAAAGAAC | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWSASFC*ELFTKN Trigger: GTTCTTTGTGAACAACTCCAAGCAGAAAGAAGCAGA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTAGTTAGAATTGCCCGCTaGATTTCATCATTGGATAAT | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLVRIAR*ISSLDN Trigger: ATTATCCAATGATGAAATCAAGCGGGCAATTCTAAC...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGCGAATCGCTTCTACTTaGGGCTTCACTTCTGCCACA | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQRIAST*GFTSAT Trigger: TGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCG...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | GTGCCTGGCCCACAACCGTTGAGCTCACCCGTCTGTTTTCCAACTCCATTTCTATTGAATCCATATGCATaGCCTCTTTGTCCTTTATTC | + |
Preference number: 5 (lower is better) Translates to: VPGPQPLSSPVCFPTPFLLNPYA*PLCPLF Trigger: GAATAAAGGACAAAGAGGCAATGCATATGGATTCAA...TAGAAATGGAGTTGGAAAACAGACGGGTGAGCTCAACGGTTGTGGGCCAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGATTTCTGGATGGTCATaGTTTCGGAAACAGCAAAAG | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWISGWS*FRKQQK Trigger: CTTTTGCTGTTTCCGAAACAATGACCATCCAGAAAT...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGATGGCTTCCCTGTGTTaGTCTGTGAGGTCAAGTTCA | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQMASLC*SVRSSS Trigger: TGAACTTGACCTCACAGACAAACACAGGGAAGCCAT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGGGAATATTCTTCTTCTaGAGTGTTAGACTCACTGGA | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWGIFFF*SVRLTG Trigger: TCCAGTGAGTCTAACACTCAAGAAGAAGAATATTCC...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGGCAACTTGGACCAGTaGAAGGATTTCAGGGCATTG | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTGNLDQ*KDFRAL Trigger: CAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGCC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGGCAACTTGGACCAGTaGAAGGATTTCAGGGCATTG | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHGNLDQ*KDFRAL Trigger: CAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGCC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGAACTCCTGCTGTCTTaGGTAGGCAGAGAACGTTCT | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTELLLS*VGRERS Trigger: AGAACGTTCTCTGCCTACCAAAGACAGCAGGAGTTC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCGAATCGCTTCTACTTaGGGCTTCACTTCTGCCACA | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHRIAST*GFTSAT Trigger: TGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | CCTTGGGCAGATCCTCCTGTTCATCCATTGTTAGAATTGCCCGCTTaGTTTCATCATTGGATAATTTCAACCTCGACAGAAGGATGTTGC | + |
Preference number: 5 (lower is better) Translates to: PWADPPVHPLLELPA*FHHWIISTSTEGCC Trigger: GCAACATCCTTCTGTCGAGGTTGAAATTATCCAATGATGAAATCAAGCGGGCAATTCTAACAATGGATGAACAGGAGGATCTGCCCAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATATGGCTTCCCTGTGTTaGTCTGTGAGGTCAAGTTCA | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHMASLC*SVRSSS Trigger: TGAACTTGACCTCACAGACAAACACAGGGAAGCCAT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTCGGGATCCTGCCCTTaGTCATTCTGGATAACTATC | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHSGSCP*SFWITI Trigger: GATAGTTATCCAGAATGACAAAGGGCAGGATCCCGA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATCGGGATCCTGCCCTTaGTCATTCTGGATAACTATC | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSGSCP*SFWITI Trigger: GATAGTTATCCAGAATGACAAAGGGCAGGATCCCGA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | CGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACCGTGGTGCCTGCTCTTTCCATaGCTTAACTTCATTTTCATT | + |
Preference number: 5 (lower is better) Translates to: RFLSTMHIGILPSLKTPWCLLFP*LNFIFI Trigger: AATGAAAATGAAGTTAAGCAATGGAAAGAGCAGGCA...CCACGGTGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCTTGCTTGTGCTCAGTaGTCTCCTTTTCCAGCTTCT | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHLACAQ*SPFPAS Trigger: AGAAGCTGGAAAAGGAGACAACTGAGCACAAGCAAG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGACTGTTCCATCCAATTaGTTCTCAGGCAACTTGGAC | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQTVPSN*FSGNLD Trigger: GTCCAAGTTGCCTGAGAACAAATTGGATGGAACAGT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATTGAGGCTGGAGATCTaGAATCCATATGCATTGCCT | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVLRLEI*NPYALP Trigger: AGGCAATGCATATGGATTCAAGATCTCCAGCCTCAA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTTGGTATCCGCTATCTaGTTGAGGCTGGAGATCTTG | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHLVSAI*LRLEIL Trigger: CAAGATCTCCAGCCTCAACAAGATAGCGGATACCAA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGAACTCTTCGCTTAGGTaGAGGACTTTGGGGTACTTA | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQNSSLR*RTLGYL Trigger: TAAGTACCCCAAAGTCCTCAACCTAAGCGAAGAGTT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAGTTTACTTTCGCTGCTaGAGGAATATCCCGCAACTC | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTVYFRC*RNIPQL Trigger: GAGTTGCGGGATATTCCTCAAGCAGCGAAAGTAAAC...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTACGTTTCCGGTTCCGTTaGAGTTTTGAAAGGTCTTTG | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVRFRFR*SFERSL Trigger: CAAAGACCTTTCAAAACTCAAACGGAACCGGAAACG...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | CTTTTTCTTGCTACAGTATATCTGCCACTTTTTCTCTGCTGGAAGTaGAAACATGGCTTCCCTGTGTTTGTCTGTGAGGTCAAGTTCATC | + |
Preference number: 5 (lower is better) Translates to: LFLATVYLPLFLCWK*KHGFPVFVCEVKFI Trigger: GATGAACTTGACCTCACAGACAAACACAGGGAAGCCATGTTTGCACTTCCAGCAGAGAAAAAGTGGCAGATATACTGTAGCAAGAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTCCTGGTCCTTTTTCTaGCTACAGTATATCTGCCAC | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHSWSFF*LQYICH Trigger: GTGGCAGATATACTGTAGCAAGAAAAAGGACCAGGA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTCTGAGTGGCGCTTTTaGTGTCTATGTGAACCAGTT | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHSEWRF*CLCEPV Trigger: AACTGGTTCACATAGACACAAAAAGCGCCACTCAGA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATTGCTGCTTAACTTGCTaGTGCTCAGTTGTCTCCTTT | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHCCLTC*CSVVSF Trigger: AAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCA...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATGCTGCTTAACTTGCTaGTGCTCAGTTGTCTCCTTT | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTCCLTC*CSVVSF Trigger: AAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATACTGTTCCATCCAATTaGTTCTCAGGCAACTTGGAC | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHTVPSN*FSGNLD Trigger: GTCCAAGTTGCCTGAGAACAAATTGGATGGAACAGT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATCTTTCTGCTTGGAGTaGTTCACAAAGAACTCCTGC | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTSFCLE*FTKNSC Trigger: GCAGGAGTTCTTTGTGAACAACTCCAAGCAGAAAGA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085299.4 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATAACTCTTCGCTTAGGTaGAGGACTTTGGGGTACTTA | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHNSSLR*RTLGYL Trigger: TAAGTACCCCAAAGTCCTCAACCTAAGCGAAGAGTT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATCGTTTCCGGTTCCGTTaGAGTTTTGAAAGGTCTTTG | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHRFRFR*SFERSL Trigger: CAAAGACCTTTCAAAACTCAAACGGAACCGGAAACG...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 90 bp | ACGTTCTTGATATTAAAGTTTTCCAGAGGTGTGGAGTCGGGATCCTaGCCTTTGTCATTCTGGATAACTATCTGCTGTATGATTCTGTCT | + |
Preference number: 5 (lower is better) Translates to: TFLILKFSRGVESGS*PLSFWITICCMILS Trigger: AGACAGAATCATACAGCAGATAGTTATCCAGAATGACAAAGGGCAGGATCCCGACTCCACACCTCTGGAAAACTTTAATATCAAGAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGGAATATTCTTCTTCTaGAGTGTTAGACTCACTGGA | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQGIFFF*SVRLTG Trigger: TCCAGTGAGTCTAACACTCAAGAAGAAGAATATTCC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGATCACTGACAGCTCTTaGACTTTAAGTTTGGAACTC | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQITDSS*TLSLEL Trigger: GAGTTCCAAACTTAAAGTCAAAGAGCTGTCAGTGAT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 90 bp | AGTGCAAAGTTGCTATCATTCCTAAGCCGATATGTGATTTCTGGATaGTCATTGTTTCGGAAACAGCAAAAGATAAATGAAATCCCCCGG | + |
Preference number: 5 (lower is better) Translates to: SAKLLSFLSRYVISG*SLFRKQQKINEIPR Trigger: CCGGGGGATTTCATTTATCTTTTGCTGTTTCCGAAACAATGACCATCCAGAAATCACATATCGGCTTAGGAATGATAGCAACTTTGCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATATTTCTGGATGGTCATaGTTTCGGAAACAGCAAAAG | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHISGWS*FRKQQK Trigger: CTTTTGCTGTTTCCGAAACAATGACCATCCAGAAAT...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAATTTCTGGATGGTCATaGTTTCGGAAACAGCAAAAG | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTISGWS*FRKQQK Trigger: CTTTTGCTGTTTCCGAAACAATGACCATCCAGAAAT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGAATGCCTGTCTAGTGTaGAATTTTCATGTTCCCTTA | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQNACLV*NFHVPL Trigger: TAAGGGAACATGAAAATTCAACACTAGACAGGCATT...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATACCATATAATTTAAGGATACTAGGAGCTGGCAGGTCAGTGGTAAGCGTCCATGGAATATTCTTCTTCTaGAGTGTTAGACTCACTGGA | + |
Preference number: 5 (lower is better) Translates to: IPYNLRILGAGRSVVSVHGIFFF*SVRLTG Trigger: TCCAGTGAGTCTAACACTCAAGAAGAAGAATATTCC...ATGGACGCTTACCACTGACCTGCCAGCTCCTAGTATCCTTAAATTATATGGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACACGCTTGATTTCATCATaGGATAATTTCAACCTCGAC | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTRLISS*DNFNLD Trigger: GTCGAGGTTGAAATTATCCAATGATGAAATCAAGCG...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGGTTAGAATTGCCCGCTaGATTTCATCATTGGATAAT | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQVRIAR*ISSLDN Trigger: ATTATCCAATGATGAAATCAAGCGGGCAATTCTAAC...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATTGTTAGGTCAATGAGGAAGCTCTGGCAATTCTGGTTCTTAACCAGGATCCAGTTGAATCCATATGCATaGCCTCTTTGTCCTTTATTC | + |
Preference number: 5 (lower is better) Translates to: IVRSMRKLWQFWFLTRIQLNPYA*PLCPLF Trigger: GAATAAAGGACAAAGAGGCAATGCATATGGATTCAA...CTGGATCCTGGTTAAGAACCAGAATTGCCAGAGCTTCCTCATTGACCTAACAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | TCACTCACAGAGGAGAGAAGAAATTGCCATTGTTTTGGATCGCAAGGCAGTGTATTGAATCCATATGCATaGCCTCTTTGTCCTTTATTC | + |
Preference number: 5 (lower is better) Translates to: SLTEERRNCHCFGSQGSVLNPYA*PLCPLF Trigger: GAATAAAGGACAAAGAGGCAATGCATATGGATTCAA...TACACTGCCTTGCGATCCAAAACAATGGCAATTTCTTCTCTCCTCTGTGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATTGTCAATACTGGATTaGGTATCCGCTATCTTGTTG | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTLSILD*VSAILL Trigger: CAACAAGATAGCGGATACCAAATCCAGTATTGACAA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 90 bp | GGTAGGCAGAGAACGTTCTTTCTAGGTCTTCAAGGTCTAGAATTTTaGAGACTTTGGTATCATCAATTTCAGTCCATACTGTTCCATCCA | + |
Preference number: 5 (lower is better) Translates to: GRQRTFFLGLQGLEF*RLWYHQFQSILFHP Trigger: TGGATGGAACAGTATGGACTGAAATTGATGATACCAAAGTCTTCAAAATTCTAGACCTTGAAGACCTAGAAAGAACGTTCTCTGCCTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACAAATGCCTGTCTAGTGTaGAATTTTCATGTTCCCTTA | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTNACLV*NFHVPL Trigger: TAAGGGAACATGAAAATTCAACACTAGACAGGCATT...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS-3UTR CAA 90 bp | ATAGTACGGTTCCTGTCTACTATGCACATTGGTATTCTACCGTCCCTGAAAACATGCCTGCTCTTTCCATaGCTTAACTTCATTTTCATT | + |
Preference number: 5 (lower is better) Translates to: IVRFLSTMHIGILPSLKTCLLFP*LNFIFI Trigger: AATGAAAATGAAGTTAAGCAATGGAAAGAGCAGGCA...TGTTTTCAGGGACGGTAGAATACCAATGTGCATAGTAGACAGGAACCGTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | CTCACCTTCCGCTCCCTCTCCCGCTGCTCTTTGAGCTaGGCTTCCAGGCGAGCCCGCCGTTCCTCCTCCTCC | + |
Preference number: 6 (lower is better) Translates to: LTFRSLSRCSLS*ASRRARRSSSS Trigger: GGAGGAGGAGGAACGGCGGGCTCGCCTGGAAGCTCAGCTCAAAGAGCAGCGGGAGAGGGAGCGGAAGGTGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | CCTTCCTCACCTTCCGCTCCCTCTCCCGCTGCTCTTTaGGCTGAGCTTCCAGGCGAGCCCGCCGTTCCTCCT | + |
Preference number: 6 (lower is better) Translates to: PSSPSAPSPAAL*AELPGEPAVPP Trigger: AGGAGGAACGGCGGGCTCGCCTGGAAGCTCAGCTCAAAGAGCAGCGGGAGAGGGAGCGGAAGGTGAGGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | GGGACTGCTGCACAGACGGCCCTCCTGTTCAGCTCGTaGAGCTGCGCCGTGAGGTCTGCCACCTGCTGCTTA | + |
Preference number: 6 (lower is better) Translates to: GTAAQTALLFSS*SCAVRSATCCL Trigger: TAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAGGGCCGTCTGTGCAGCAGTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | GCTGCACAGACGGCCCTCCTGTTCAGCTCGTGGAGCTaGGCCGTGAGGTCTGCCACCTGCTGCTTAACTTGC | + |
Preference number: 6 (lower is better) Translates to: AAQTALLFSSWS*AVRSATCCLTC Trigger: GCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAGGGCCGTCTGTGCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | CCTCCTGTTCAGCTCGTGGAGCTGCGCCGTGAGGTCTaGCACCTGCTGCTTAACTTGCTTGTGCTCAGTTGT | + |
Preference number: 6 (lower is better) Translates to: PPVQLVELRREV*HLLLNLLVLSC Trigger: ACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAACAGGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | AGCTCGTGGAGCTGCGCCGTGAGGTCTGCCACCTGCTaGTTAACTTGCTTGTGCTCAGTTGTCTCCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: SSWSCAVRSATC*LTCLCSVVSFS Trigger: GGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | CTGGCTGACAACAGACACGAACTTGTCTCCAGGCTGTaGGGGCTGAGACTTCTGATACTCCAGCTCCGTCTC | + |
Preference number: 6 (lower is better) Translates to: LADNRHELVSRL*GLRLLILQLRL Trigger: GAGACGGAGCTGGAGTATCAGAAGTCTCAGCCCCCACAGCCTGGAGACAAGTTCGTGTCTGTTGTCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | TGTAAGGCATCTGGAGGCAATGGTGCAGAATGGACATaGAGTGGGGGTAGGCTTCGCTGTGGGTTAGCCTCC | + |
Preference number: 6 (lower is better) Translates to: CKASGGNGAEWT*SGGRLRCGLAS Trigger: GGAGGCTAACCCACAGCGAAGCCTACCCCCACTTCATGTCCATTCTGCACCATTGCCTCCAGATGCCTTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | TTCAGCTCGTGGAGCTGCGCCGTGAGGTCTGCCACCTaGTGCTTAACTTGCTTGTGCTCAGTTGTCTCCTTT | + |
Preference number: 6 (lower is better) Translates to: FSSWSCAVRSAT*CLTCLCSVVSF Trigger: AAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTCCACGAGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | AGTGGGGGTAGGCTTCGCTGTGGGTTAGCCTCCTCCTaGTCAGCTCAAACATCTGAGTGGCGCTTTTTGTGT | + |
Preference number: 6 (lower is better) Translates to: SGGRLRCGLASS*SAQTSEWRFLC Trigger: ACACAAAAAGCGCCACTCAGATGTTTGAGCTGACCAGGAGGAGGCTAACCCACAGCGAAGCCTACCCCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | GAGCTGCGCCGTGAGGTCTGCCACCTGCTGCTTAACTaGCTTGTGCTCAGTTGTCTCCTTTTCCAGCTTCTC | + |
Preference number: 6 (lower is better) Translates to: ELRREVCHLLLN*LVLSCLLFQLL Trigger: GAGAAGCTGGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | CGGCTGCTGTCCGTCACCTGGTTGGAAATGCGTTTCCGGTTCCGTTaGAGTTTTGAAAGGTCTTTGTCGAACACCTCTCCTGAGCGCAGC | + |
Preference number: 6 (lower is better) Translates to: RLLSVTWLEMRFRFR*SFERSLSNTSPERS Trigger: GCTGCGCTCAGGAGAGGTGTTCGACAAAGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGGACAGCAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | TCCACAGGGGGCATGGGCAGCGCCGGCTCCATTGTCTaGAGTGCAAAGTTGCTATCATTCCTAAGCCGATAT | + |
Preference number: 6 (lower is better) Translates to: STGGMGSAGSIV*SAKLLSFLSRY Trigger: ATATCGGCTTAGGAATGATAGCAACTTTGCACTTCAGACAATGGAGCCGGCGCTGCCCATGCCCCCTGTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | AGCTGCGCCGTGAGGTCTGCCACCTGCTGCTTAACTTaGTTGTGCTCAGTTGTCTCCTTTTCCAGCTTCTCT | + |
Preference number: 6 (lower is better) Translates to: SCAVRSATCCLT*LCSVVSFSSFS Trigger: AGAGAAGCTGGAAAAGGAGACAACTGAGCACAAGCAAGTTAAGCAGCAGGTGGCAGACCTCACGGCGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | TGGTTGGAAATGCGTTTCCGGTTCCGTTTGAGTTTTGAAAGGTCTTaGTCGAACACCTCTCCTGAGCGCAGCGCCGAGACCAGGTCGTCA | + |
Preference number: 6 (lower is better) Translates to: WLEMRFRFRLSFERS*SNTSPERSAETRSS Trigger: TGACGACCTGGTCTCGGCGCTGCGCTCAGGAGAGGTGTTCGACAAAGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | CCGTCTCTACAGCTTTCAGGCCACTCCTCAGGGTGCTaGTCTCCTTGTCCAGCTCAGTCATGTTTACTTTCG | + |
Preference number: 6 (lower is better) Translates to: PSLQLSGHSSGC*SPCPAQSCLLS Trigger: CGAAAGTAAACATGACTGAGCTGGACAAGGAGATCAGCACCCTGAGGAGTGGCCTGAAAGCTGTAGAGACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | ACACCTCCTCAGAGCCAGAGCGAATCGCTTCTACTTTaGGCTTCACTTCTGCCACACGCTCTGCAAACTTCT | + |
Preference number: 6 (lower is better) Translates to: TPPQSQSESLLL*ASLLPHALQTS Trigger: AGAAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCGCTCTGGCTCTGAGGAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | TTTGTGATTGGTCGCTCCCGGCTGCTGTCCGTCACCTaGTTGGAAATGCGTTTCCGGTTCCGTTTGAGTTTT | + |
Preference number: 6 (lower is better) Translates to: FVIGRSRLLSVT*LEMRFRFRLSF Trigger: AAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGGACAGCAGCCGGGAGCGACCAATCACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | AACACCTCCTCAGAGCCAGAGCGAATCGCTTCTACTTaGGGCTTCACTTCTGCCACACGCTCTGCAAACTTC | + |
Preference number: 6 (lower is better) Translates to: NTSSEPERIAST*GFTSATRSANF Trigger: GAAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCGCTCTGGCTCTGAGGAGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | CGGCTCCTGAACACCTCCTCAGAGCCAGAGCGAATCGCTTCTACTTaGGGCTTCACTTCTGCCACACGCTCTGCAAACTTCTTTTTGAAG | + |
Preference number: 6 (lower is better) Translates to: RLLNTSSEPERIAST*GFTSATRSANFFLK Trigger: CTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCGCTCTGGCTCTGAGGAGGTGTTCAGGAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | TTGAAGGATTTCAGGGCATTGGTGGGCTGGGGAATATTCTTCTTCTaGAGTGTTAGACTCACTGGAGCACCAGGAGGTGGCAGAACTCCT | + |
Preference number: 6 (lower is better) Translates to: LKDFRALVGWGIFFF*SVRLTGAPGGGRTP Trigger: AGGAGTTCTGCCACCTCCTGGTGCTCCAGTGAGTCTAACACTCAAGAAGAAGAATATTCCCCAGCCCACCAATGCCCTGAAATCCTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | TTCCTAACATCAGAAATTCATAGCGAAGATGGAGCCTaGAGTCCAAACTCTCCACTCCGGCTCCCTGGCTCA | + |
Preference number: 6 (lower is better) Translates to: FLTSEIHSEDGA*SPNSPLRLPGS Trigger: TGAGCCAGGGAGCCGGAGTGGAGAGTTTGGACTTCAGGCTCCATCTTCGCTATGAATTTCTGATGTTAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | CCGTCACCTGGTTGGAAATGCGTTTCCGGTTCCGTTTaGGTTTTGAAAGGTCTTTGTCGAACACCTCTCCTG | + |
Preference number: 6 (lower is better) Translates to: PSPGWKCVSGSV*VLKGLCRTPLL Trigger: CAGGAGAGGTGTTCGACAAAGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | TTAAGTTTTGTGATTGGTCGCTCCCGGCTGCTGTCCGTCACCTGGTaGGAAATGCGTTTCCGGTTCCGTTTGAGTTTTGAAAGGTCTTTG | + |
Preference number: 6 (lower is better) Translates to: LSFVIGRSRLLSVTW*EMRFRFRLSFERSL Trigger: CAAAGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGGACAGCAGCCGGGAGCGACCAATCACAAAACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | TCCTTGTCCAGCTCAGTCATGTTTACTTTCGCTGCTTaGGGAATATCCCGCAACTCTTCGCTTAGGTTGAGG | + |
Preference number: 6 (lower is better) Translates to: SLSSSVMFTFAA*GISRNSSLRLR Trigger: CCTCAACCTAAGCGAAGAGTTGCGGGATATTCCTCAAGCAGCGAAAGTAAACATGACTGAGCTGGACAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | GCCAGAGCGAATCGCTTCTACTTTGGGCTTCACTTCTaGCACACGCTCTGCAAACTTCTTTTTGAAGTACAG | + |
Preference number: 6 (lower is better) Translates to: ARANRFYFGLHF*HTLCKLLFEVQ Trigger: CTGTACTTCAAAAAGAAGTTTGCAGAGCGTGTGGCAGAAGTGAAGCCCAAAGTAGAAGCGATTCGCTCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | CTGAAGAAACTGATCAAAGATCCCGAAGAACTCATCTaGCTGGATCTTGCCAGCCTCTTCCCCAAAGTGCTT | + |
Preference number: 6 (lower is better) Translates to: LKKLIKDPEELI*LDLASLFPKVL Trigger: AAGCACTTTGGGGAAGAGGCTGGCAAGATCCAGCCAGATGAGTTCTTCGGGATCTTTGATCAGTTTCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | TCCGTCACCTGGTTGGAAATGCGTTTCCGGTTCCGTTaGAGTTTTGAAAGGTCTTTGTCGAACACCTCTCCT | + |
Preference number: 6 (lower is better) Translates to: SVTWLEMRFRFR*SFERSLSNTSP Trigger: AGGAGAGGTGTTCGACAAAGACCTTTCAAAACTCAAACGGAACCGGAAACGCATTTCCAACCAGGTGACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | TTCCATCCAATTTGTTCTCAGGCAACTTGGACCAGTTaGAGGATTTCAGGGCATTGGTGGGCTGGGGAATAT | + |
Preference number: 6 (lower is better) Translates to: FHPICSQATWTS*RISGHWWAGEY Trigger: ATATTCCCCAGCCCACCAATGCCCTGAAATCCTTCAACTGGTCCAAGTTGCCTGAGAACAAATTGGATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | GCTACAGTATATCTGCCACTTTTTCTCTGCTGGAAGTaGAAACATGGCTTCCCTGTGTTTGTCTGTGAGGTC | + |
Preference number: 6 (lower is better) Translates to: ATVYLPLFLCWK*KHGFPVFVCEV Trigger: GACCTCACAGACAAACACAGGGAAGCCATGTTTGCACTTCCAGCAGAGAAAAAGTGGCAGATATACTGTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | GAATCTGGTTACAAACCTCATGGGCTTGGTTCTCAGTaGTGTCTTCAGACTCTCGATGGTTTTACTCCTCTC | + |
Preference number: 6 (lower is better) Translates to: ESGYKPHGLGSQ*CLQTLDGFTPL Trigger: GAGAGGAGTAAAACCATCGAGAGTCTGAAGACAGCACTGAGAACCAAGCCCATGAGGTTTGTAACCAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | AGAGGTGTGGAGTCGGGATCCTGCCCTTTGTCATTCTaGATAACTATCTGCTGTATGATTCTGTCTAACAGC | + |
Preference number: 6 (lower is better) Translates to: RGVESGSCPLSF*ITICCMILSNS Trigger: GCTGTTAGACAGAATCATACAGCAGATAGTTATCCAGAATGACAAAGGGCAGGATCCCGACTCCACACCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | TTGGACCAGTTGAAGGATTTCAGGGCATTGGTGGGCTaGGGAATATTCTTCTTCTTGAGTGTTAGACTCACT | + |
Preference number: 6 (lower is better) Translates to: LDQLKDFRALVG*GIFFFLSVRLT Trigger: AGTGAGTCTAACACTCAAGAAGAAGAATATTCCCCAGCCCACCAATGCCCTGAAATCCTTCAACTGGTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | AAGTTTTCCAGAGGTGTGGAGTCGGGATCCTGCCCTTaGTCATTCTGGATAACTATCTGCTGTATGATTCTG | + |
Preference number: 6 (lower is better) Translates to: KFSRGVESGSCP*SFWITICCMIL Trigger: CAGAATCATACAGCAGATAGTTATCCAGAATGACAAAGGGCAGGATCCCGACTCCACACCTCTGGAAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | GCATCACATTCTCTCTCTTTCTTCTCCAGCTTCTGTTGTAGCTCATaGTGCTCTTTCCTCATCTTCTCTGCCTGCTCTTTCCATTGCTTA | + |
Preference number: 6 (lower is better) Translates to: ASHSLSFFSSFCCSS*CSFLIFSACSFHCL Trigger: TAAGCAATGGAAAGAGCAGGCAGAGAAGATGAGGAAAGAGCACAATGAGCTACAACAGAAGCTGGAGAAGAAAGAGAGAGAATGTGATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | TCGCTTTTCTCAGGAACGAATTTCAAAAGCTGTTCTAACATGTCCTaGGGCAGATCCTCCTGTTCATCCATTGTTAGAATTGCCCGCTTG | + |
Preference number: 6 (lower is better) Translates to: SLFSGTNFKSCSNMS*GRSSCSSIVRIARL Trigger: CAAGCGGGCAATTCTAACAATGGATGAACAGGAGGATCTGCCCAAGGACATGTTAGAACAGCTTTTGAAATTCGTTCCTGAGAAAAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | ATATTAAAGTTTTCCAGAGGTGTGGAGTCGGGATCCTaGCCTTTGTCATTCTGGATAACTATCTGCTGTATG | + |
Preference number: 6 (lower is better) Translates to: ILKFSRGVESGS*PLSFWITICCM Trigger: CATACAGCAGATAGTTATCCAGAATGACAAAGGGCAGGATCCCGACTCCACACCTCTGGAAAACTTTAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS GCA 72 bp | CATCATTGGATAATTTCAACCTCGACAGAAGGATGTTaGAATTCTGAGCTCTCCGACCATCAATCACTGACA | + |
Preference number: 6 (lower is better) Translates to: HHWIISTSTEGC*NSELSDHQSLT Trigger: TGTCAGTGATTGATGGTCGGAGAGCTCAGAATTGCAACATCCTTCTGTCGAGGTTGAAATTATCCAATGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | TTGATATTAAAGTTTTCCAGAGGTGTGGAGTCGGGATCCTGCCCTTaGTCATTCTGGATAACTATCTGCTGTATGATTCTGTCTAACAGC | + |
Preference number: 6 (lower is better) Translates to: LILKFSRGVESGSCP*SFWITICCMILSNS Trigger: GCTGTTAGACAGAATCATACAGCAGATAGTTATCCAGAATGACAAAGGGCAGGATCCCGACTCCACACCTCTGGAAAACTTTAATATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | TTCTTGTCAATACTGGATTTGGTATCCGCTATCTTGTaGAGGCTGGAGATCTTGAATCCATATGCATTGCCT | + |
Preference number: 6 (lower is better) Translates to: FLSILDLVSAIL*RLEILNPYALP Trigger: AGGCAATGCATATGGATTCAAGATCTCCAGCCTCAACAAGATAGCGGATACCAAATCCAGTATTGACAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | GATCCTCCTGTTCATCCATTGTTAGAATTGCCCGCTTaGTTTCATCATTGGATAATTTCAACCTCGACAGAA | + |
Preference number: 6 (lower is better) Translates to: DPPVHPLLELPA*FHHWIISTSTE Trigger: TTCTGTCGAGGTTGAAATTATCCAATGATGAAATCAAGCGGGCAATTCTAACAATGGATGAACAGGAGGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | TCAGGAACGAATTTCAAAAGCTGTTCTAACATGTCCTaGGGCAGATCCTCCTGTTCATCCATTGTTAGAATT | + |
Preference number: 6 (lower is better) Translates to: SGTNFKSCSNMS*GRSSCSSIVRI Trigger: AATTCTAACAATGGATGAACAGGAGGATCTGCCCAAGGACATGTTAGAACAGCTTTTGAAATTCGTTCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | ACTTCATTTTCATTAACCAACATTCTTACGACGTTCTaGATATTAAAGTTTTCCAGAGGTGTGGAGTCGGGA | + |
Preference number: 6 (lower is better) Translates to: TSFSLTNILTTF*ILKFSRGVESG Trigger: TCCCGACTCCACACCTCTGGAAAACTTTAATATCAAGAACGTCGTAAGAATGTTGGTTAATGAAAATGAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 72 bp | CTTTCTAGGTCTTCAAGGTCTAGAATTTTGAAGACTTaGGTATCATCAATTTCAGTCCATACTGTTCCATCC | + |
Preference number: 6 (lower is better) Translates to: LSRSSRSRILKT*VSSISVHTVPS Trigger: GGATGGAACAGTATGGACTGAAATTGATGATACCAAAGTCTTCAAAATTCTAGACCTTGAAGACCTAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CAA 90 bp | GAGAACGTTCTTTCTAGGTCTTCAAGGTCTAGAATTTTGAAGACTTaGGTATCATCAATTTCAGTCCATACTGTTCCATCCAATTTGTTC | + |
Preference number: 6 (lower is better) Translates to: ENVLSRSSRSRILKT*VSSISVHTVPSNLF Trigger: GAACAAATTGGATGGAACAGTATGGACTGAAATTGATGATACCAAAGTCTTCAAAATTCTAGACCTTGAAGACCTAGAAAGAACGTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS TCA 72 bp | AGAACGTTCTTTCTAGGTCTTCAAGGTCTAGAATTTTaGAGACTTTGGTATCATCAATTTCAGTCCATACTG | + |
Preference number: 6 (lower is better) Translates to: RTFFLGLQGLEF*RLWYHQFQSIL Trigger: CAGTATGGACTGAAATTGATGATACCAAAGTCTTCAAAATTCTAGACCTTGAAGACCTAGAAAGAACGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | TTGCTATCATTCCTAAGCCGATATGTGATTTCTGGATaGTCATTGTTTCGGAAACAGCAAAAGATAAATGAA | + |
Preference number: 6 (lower is better) Translates to: LLSFLSRYVISG*SLFRKQQKINE Trigger: TTCATTTATCTTTTGCTGTTTCCGAAACAATGACCATCCAGAAATCACATATCGGCTTAGGAATGATAGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |
||
CDS CCA 72 bp | AAAGTTGCTATCATTCCTAAGCCGATATGTGATTTCTaGATGGTCATTGTTTCGGAAACAGCAAAAGATAAA | + |
Preference number: 6 (lower is better) Translates to: KVAIIPKPICDF*MVIVSETAKDK Trigger: TTTATCTTTTGCTGTTTCCGAAACAATGACCATCCAGAAATCACATATCGGCTTAGGAATGATAGCAACTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000085299.4 ENSMUST00000221317.2 ENSMUST00000223272.2 |