Pregenerated sensors for CZIB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028608Ensembl transcript IDs: ENSMUST00000106726.10, ENSMUST00000106727.10, ENSMUST00000119394.8, ENSMUST00000120473.8, ENSMUST00000125107.8, ENSMUST00000128474.2, ENSMUST00000132417.8, ENSMUST00000134254.2, ENSMUST00000135454.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGCTGCCTGCTTGCTTCTAGGGTAGACTGTGCTTGGGCCTGGTaGGAGAGAGACTGCCCTGAGGGAGGCTGGAACCCCTCTCTGTCA | + |
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Preference number: 1 (lower is better) Translates to: QSCLLASRVDCAWAW*ERDCPEGGWNPSLS Trigger: TGACAGAGAGGGGTTCCAGCCTCCCTCAGGGCAGTCTCTCTCTCACCAGGCCCAAGCACAGTCTACCCTAGAAGCAAGCAGGCAGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR GCA 90 bp | GCAGAGCAGCCATGGGTGTTCCTTGGAGAGGCAGAGGCCCGATGGTaGTCAGAGTGCCTCTTGCTGCTGCTGCTAGGCCTGATCATGCTT | + |
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Preference number: 1 (lower is better) Translates to: AEQPWVFLGEAEARW*SECLLLLLLGLIML Trigger: AAGCATGATCAGGCCTAGCAGCAGCAGCAAGAGGCACTCTGAGCACCATCGGGCCTCTGCCTCTCCAAGGAACACCCATGGCTGCTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR GCA 90 bp | TTCTGCTTGGGCCTCTCCTATTCCAATGCATGGGGCTCAGGGCCATaGGCTCACGATCCACCTTCCCATGGCACTTCCTCTTCTTCCTCC | + |
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Preference number: 1 (lower is better) Translates to: FCLGLSYSNAWGSGP*AHDPPSHGTSSSSS Trigger: GGAGGAAGAAGAGGAAGTGCCATGGGAAGGTGGATCGTGAGCGCATGGCCCTGAGCCCCATGCATTGGAATAGGAGAGGCCCAAGCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR CCA 90 bp | GACCACCTTCACGCAGCACTGTGGCACCAACAGGGGCTTTATTGGTaGGACTTAGAACTGCGGCAAACCCTGGCATGCAGACTTGGTACA | + |
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Preference number: 1 (lower is better) Translates to: DHLHAALWHQQGLYW*DLELRQTLACRLGT Trigger: TGTACCAAGTCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAGGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR CCA 90 bp | TCAGACCACCTTCACGCAGCACTGTGGCACCAACAGGGGCTTTATTaGTGGGACTTAGAACTGCGGCAAACCCTGGCATGCAGACTTGGT | + |
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Preference number: 1 (lower is better) Translates to: SDHLHAALWHQQGLY*WDLELRQTLACRLG Trigger: ACCAAGTCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAGGTGGTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR CCA 90 bp | GTGGCTAGTTTGCCAGCTCCCTCTGTTAGACCCTCTGACCCAGCCTaGGGACAGCATGCCATTTTCTTCTCTCAGCAGTGGAACACATGG | + |
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Preference number: 1 (lower is better) Translates to: VASLPAPSVRPSDPA*GQHAIFFSQQWNTW Trigger: CCATGTGTTCCACTGCTGAGAGAAGAAAATGGCATGCTGTCCCCAGGCTGGGTCAGAGGGTCTAACAGAGGGAGCTGGCAAACTAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR CCA 90 bp | ACTCGAAGGGAGGAAAAGCAGGGACCTTCCTGCCATTCTCAGATGTaGCTAGTTTGCCAGCTCCCTCTGTTAGACCCTCTGACCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: TRREEKQGPSCHSQM*LVCQLPLLDPLTQP Trigger: AGGCTGGGTCAGAGGGTCTAACAGAGGGAGCTGGCAAACTAGCCACATCTGAGAATGGCAGGAAGGTCCCTGCTTTTCCTCCCTTCGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR GCA 90 bp | CAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCATaGAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: QGLYWWDLELRQTLA*RLGTGARRAEMRSL Trigger: GAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
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| 3UTR GCA 90 bp | GGAGAGTCCCACCCCTCTCTGGGCAGTTTACCTGTAGCACTTAAGTaGGATGACGGTCTCCCCAGGACAGTGCTGTTTAGATGGGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GESHPSLGSLPVALK*DDGLPRTVLFRWVK Trigger: TTTAACCCATCTAAACAGCACTGTCCTGGGGAGACCGTCATCGCACTTAAGTGCTACAGGTAAACTGCCCAGAGAGGGGTGGGACTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR CCA 90 bp | AACCCCTCTCTGTCAGTTACAGAAGCACCCAGGAAGCAGGCAACATaGCTGTTGCAGCAAATATTAGGGGTTCCTACTCCTCCTTGGGTC | + |
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Preference number: 1 (lower is better) Translates to: NPSLSVTEAPRKQAT*LLQQILGVPTPPWV Trigger: GACCCAAGGAGGAGTAGGAACCCCTAATATTTGCTGCAACAGCCATGTTGCCTGCTTCCTGGGTGCTTCTGTAACTGACAGAGAGGGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR TCA 90 bp | TGTCTGCTGTGTGGGATCTTTGGTCCCACGAGACTTAAGAGGCAATaGCTGCTGTCTTCACTCCAAGAGTTGTCTGCAGGTAGAACAGGG | + |
|
Preference number: 1 (lower is better) Translates to: CLLCGIFGPTRLKRQ*LLSSLQELSAGRTG Trigger: CCCTGTTCTACCTGCAGACAACTCTTGGAGTGAAGACAGCAGTCATTGCCTCTTAAGTCTCGTGGGACCAAAGATCCCACACAGCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR GCA 90 bp | AACCTGTTTATTGATCTCTTTGGCTATCACAAGGCTAGCTGCCACTaGTCTGTACACTGGGGCATCTGCTACACCAGTCTCCCATCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: NLFIDLFGYHKASCH*SVHWGICYTSLPSV Trigger: CACAGATGGGAGACTGGTGTAGCAGATGCCCCAGTGTACAGAGCAGTGGCAGCTAGCCTTGTGATAGCCAAAGAGATCAATAAACAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR GCA 90 bp | GGGAGTCCTCGCTACCCTGACCTTTCCTCACTCATAAGCAGCCCTTaGTGTTGGCTTTCTCTTAATTCTTCGTCTATTAAGGGCTCTGTT | + |
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Preference number: 1 (lower is better) Translates to: GSPRYPDLSSLISSP*CWLSLNSSSIKGSV Trigger: AACAGAGCCCTTAATAGACGAAGAATTAAGAGAAAGCCAACAGCAAGGGCTGCTTATGAGTGAGGAAAGGTCAGGGTAGCGAGGACTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR CCA 90 bp | CCTCGCTACCCTGACCTTTCCTCACTCATAAGCAGCCCTTGCTGTTaGCTTTCTCTTAATTCTTCGTCTATTAAGGGCTCTGTTGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: PRYPDLSSLISSPCC*LSLNSSSIKGSVVV Trigger: AACCACAACAGAGCCCTTAATAGACGAAGAATTAAGAGAAAGCCAACAGCAAGGGCTGCTTATGAGTGAGGAAAGGTCAGGGTAGCGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR TCA 90 bp | ACTGCTCTGTACACTGGGGCATCTGCTACACCAGTCTCCCATCTGTaGCTCACAGGGATTTCAGAATTGATTTGTTCTACTGAACACAAG | + |
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Preference number: 1 (lower is better) Translates to: TALYTGASATPVSHL*LTGISELICSTEHK Trigger: CTTGTGTTCAGTAGAACAAATCAATTCTGAAATCCCTGTGAGTCACAGATGGGAGACTGGTGTAGCAGATGCCCCAGTGTACAGAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR CCA 90 bp | GCACTTAAGTGCGATGACGGTCTCCCCAGGACAGTGCTGTTTAGATaGGTTAAAGACTCAGCTGAACTTTCTGAGAATAGTTTAAAGATA | + |
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Preference number: 1 (lower is better) Translates to: ALKCDDGLPRTVLFR*VKDSAELSENSLKI Trigger: TATCTTTAAACTATTCTCAGAAAGTTCAGCTGAGTCTTTAACCCATCTAAACAGCACTGTCCTGGGGAGACCGTCATCGCACTTAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR CCA 90 bp | GAAAATGAGTGTCTGAACACTGCCTACTTATCTGTGATCATAACATaGATCTTTAATGACTTTCAGCGAAGCTCAATAGTATTCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: ENECLNTAYLSVIIT*IFNDFQRSSIVFST Trigger: AGTGGAGAATACTATTGAGCTTCGCTGAAAGTCATTAAAGATCCATGTTATGATCACAGATAAGTAGGCAGTGTTCAGACACTCATTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR CAA 90 bp | TATGGAGTTCGGGTGACCGTTCAGCAGAGCAGCCATGGGTGTTCCTaGGAGAGGCAGAGGCCCGATGGTGCTCAGAGTGCCTCTTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: YGVRVTVQQSSHGCS*ERQRPDGAQSASCC Trigger: GCAGCAAGAGGCACTCTGAGCACCATCGGGCCTCTGCCTCTCCAAGGAACACCCATGGCTGCTCTGCTGAACGGTCACCCGAACTCCATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR CAA 90 bp | CTCAGACCACCTTCACGCAGCACTGTGGCACCAACAGGGGCTTTATaGGTGGGACTTAGAACTGCGGCAAACCCTGGCATGCAGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRPPSRSTVAPTGAL*VGLRTAANPGMQTW Trigger: CCAAGTCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAGGTGGTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCTCAATAGCTCTGTCTGCTGTGTGGGATCTTTGGTCCCACGAGACTTAAGAGCTCTGGGTGTGAGATaGGCAGCTAACGGAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: ALNSSVCCVGSLVPRDLRALGVR*AANGGA Trigger: GGCACCTCCGTTAGCTGCTCATCTCACACCCAGAGC...TCTTAAGTCTCGTGGGACCAAAGATCCCACACAGCAGACAGAGCTATTGAGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | CTATTCCAATGCATGGGGCTCAGGGCCATGCGCTCACGATCCACCTTCCCATGGCTCAATAGCTCTGTCTaGTGTGTGGGATCTTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: LFQCMGLRAMRSRSTFPWLNSSV*CVGSLV Trigger: GACCAAAGATCCCACACAGCAGACAGAGCTATTGAG...CCATGGGAAGGTGGATCGTGAGCGCATGGCCCTGAGCCCCATGCATTGGAATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTGGCTATCACAAGGCTAGCTGCCACTGCTCTGTACACTGGGGCATCTGCAAGCAGGGACCTTCCTaGCATTCTCAGATGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LFGYHKASCHCSVHWGICKQGPS*HSQMWL Trigger: TAGCCACATCTGAGAATGGCAGGAAGGTCCCTGCTT...GCAGATGCCCCAGTGTACAGAGCAGTGGCAGCTAGCCTTGTGATAGCCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGACTCGAAGGGAGGAAAAGCAGGGACCTTCCTGCCATTCTCAGATGTGGGGGAGTGTTTTAGGCTaGAACTACTGGGTTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: CQTRREEKQGPSCHSQMWGSVLG*NYWVHS Trigger: GCTGTGAACCCAGTAGTTCCAGCCTAAAACACTCCC...CCACATCTGAGAATGGCAGGAAGGTCCCTGCTTTTCCTCCCTTCGAGTCTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGATTCTTTCATGCTCTGCACATGCTCTGTCCCTGAAAGACACCCACCTATGCCCTGAGGGAGGCTaGAACCCCTCTCTGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TRILSCSAHALSLKDTHLCPEGG*NPSLSV Trigger: AACTGACAGAGAGGGGTTCCAGCCTCCCTCAGGGCA...TAGGTGGGTGTCTTTCAGGGACAGAGCATGTGCAGAGCATGAAAGAATCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR TCA 90 bp | TATTGCCTAGTACTGCGCTCAATAGCTCTGTCTGCTGTGTGGGATCTTTGGTCCGTGCTTTCATGCCTTTaGTCCTGGAGGCTGACCTGC | + |
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Preference number: 2 (lower is better) Translates to: YCLVLRSIALSAVWDLWSVLSCL*SWRLTC Trigger: GCAGGTCAGCCTCCAGGATCAAAGGCATGAAAGCAC...GGACCAAAGATCCCACACAGCAGACAGAGCTATTGAGCGCAGTACTAGGCAATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR CAA 90 bp | GCACCAGACCAAACTTCTACAGGGGGTTTAGTATACTCAACATGGTaGCCAGACTCGAAGGGAGGAAAAGCAGGGACCTTCCTGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: APDQTSTGGLVYSTW*PDSKGGKAGTFLPF Trigger: GAATGGCAGGAAGGTCCCTGCTTTTCCTCCCTTCGAGTCTGGCAACCATGTTGAGTATACTAAACCCCCTGTAGAAGTTTGGTCTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTTCTTCCTCCCCTTCTCCTTGTGGTCTCTCTTCAGACACCGCATGGGACTTTTGATCCTGGAGGCTaGCCTGCCTATTTCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: PLLPPLLLVVSLQTPHGTFDPGG*PAYFLR Trigger: TCTTAAGAAATAGGCAGGTCAGCCTCCAGGATCAAA...AGTCCCATGCGGTGTCTGAAGAGAGACCACAAGGAGAAGGGGAGGAAGAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGCAGCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAACCCGATGGTGCTCAGAGTaGCTCTTGCTGCTGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: KAALAFQGRTVQCGQWRTRWCSE*LLLLLL Trigger: TAGCAGCAGCAGCAAGAGGCACTCTGAGCACCATCG...GGTTCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGCTGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCACCAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCACAGAACAGTACAATGTaGACAGTGGAGAACCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: WHQQGLYWWDLELRQTLAQNSTM*TVENQK Trigger: CTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTG...TGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
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| 3UTR-3UTR TCA 90 bp | AGTATAACCAGGATTCTTTCATGCTCTGCACATGCTCTGTCCCTGAAAGACACCCTAGGAGAGCAGAGATaGGAAGCCTCCATGGGAACT | + |
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Preference number: 2 (lower is better) Translates to: SITRILSCSAHALSLKDTLGEQR*EASMGT Trigger: AGTTCCCATGGAGGCTTCTCATCTCTGCTCTCCTAG...GGTGTCTTTCAGGGACAGAGCATGTGCAGAGCATGAAAGAATCCTGGTTATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | GCGCTCAATAGCTCTGTCTGCTGTGTGGGATCTTTGGTCCCACGAGACTTAAGACTCCATAGGATTCTCTaGCATTTGTGCTTTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: ALNSSVCCVGSLVPRDLRLHRIL*HLCFHA Trigger: GGCATGAAAGCACAAATGGCAGAGAATCCTATGGAG...TCTTAAGTCTCGTGGGACCAAAGATCCCACACAGCAGACAGAGCTATTGAGCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTAGTATACTCAACATGGTTGCCAGACTCGAAGGGAGGAAAAGCAGGGACCTTCTTCTCTCAGCAGTaGAACACATGGGCTACAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLVYSTWLPDSKGGKAGTFFSQQ*NTWATD Trigger: GTCTGTAGCCCATGTGTTCCACTGCTGAGAGAAGAA...GGTCCCTGCTTTTCCTCCCTTCGAGTCTGGCAACCATGTTGAGTATACTAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR CCA 90 bp | GAACAGGAGGAAATACAAGCTTGCTTCAACCATAACACGTCTATGCATCATCTTTCCTCCTCAGAACCCTaGCCTGCTAGAGCTGGACTC | + |
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Preference number: 2 (lower is better) Translates to: EQEEIQACFNHNTSMHHLSSSEP*PARAGL Trigger: GAGTCCAGCTCTAGCAGGCCAGGGTTCTGAGGAGGA...AAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCTCCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120473.8 ENSMUST00000132417.8 |
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| 3UTR-3UTR CCA 90 bp | GGTAGTGTGGTTATTTTGTGGGAGAGTCCCACCCCTCTCTGGGCAGTTTACCTGCTACATGTGGGCTTCTaGGGAAATTTGTTTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: GSVVILWESPTPLWAVYLLHVGF*GNLFSE Trigger: TTCAGAAAACAAATTTCCCCAGAAGCCCACATGTAG...CAGGTAAACTGCCCAGAGAGGGGTGGGACTCTCCCACAAAATAACCACACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR CAA 90 bp | AGAGTGCCTCTTGCTGCTGCTGCTAGGCCTGATCATGCTTCATACTaGGATGTTCTTCTTGTGTTTGTGGTAGTGTGGTTATTTTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RVPLAAAARPDHASY*DVLLVFVVVWLFCG Trigger: CCCACAAAATAACCACACTACCACAAACACAAGAAGAACATCCAAGTATGAAGCATGATCAGGCCTAGCAGCAGCAGCAAGAGGCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGGATGCAGAGTCTGATTCCACAGAACTTTCATGTTGACTCTGACAGGAAGTTTGATCCTGGAGGCTaGCCTGCCTATTTCTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: QGMQSLIPQNFHVDSDRKFDPGG*PAYFLR Trigger: TCTTAAGAAATAGGCAGGTCAGCCTCCAGGATCAAA...CTTCCTGTCAGAGTCAACATGAAAGTTCTGTGGAATCAGACTCTGCATCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTCAGGGGATGCAGAGTCTGATTCCACAGAACTTTCATGTTGACTCTGACCTCCATAGGATTCTCTaGCATTTGTGCTTTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: VLQGMQSLIPQNFHVDSDLHRIL*HLCFHA Trigger: GGCATGAAAGCACAAATGGCAGAGAATCCTATGGAG...GTCAGAGTCAACATGAAAGTTCTGTGGAATCAGACTCTGCATCCCCTGAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTTAGTTCCCAAGTAAGACACAAAAATAGCCCCGAGATATCACCTGCATGTCTCTATCACAGCAAGTaGACAGAGCCATCAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: SFSSQVRHKNSPEISPACLYHSK*TEPSAR Trigger: CCTGGCTGATGGCTCTGTTCACTTGCTGTGATAGAG...ACATGCAGGTGATATCTCGGGGCTATTTTTGTGTCTTACTTGGGAACTAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR CAA 90 bp | ATGCACCTGGAGAAAACAGTTGTAAGAGGAAAACACATGAGCCTGTaGGGAGTGAAAGAGAAGGAAAGTAGATGGTTAGCAAGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: MHLEKTVVRGKHMSL*GVKEKESRWLARSA Trigger: AGCTGACCTTGCTAACCATCTACTTTCCTTCTCTTTCACTCCCAACAGGCTCATGTGTTTTCCTCTTACAACTGTTTTCTCCAGGTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCACTCCACTATCGTCTTaGACTTCTCATTGTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LSRQNSTMWTVENQKFQSTPLSS*TSHCLQ Trigger: CTGAAGACAATGAGAAGTTCAAGACGATAGTGGAGT...GCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGATTCTTTCATGCTCTGCACATGCTCTGTCCCTGAAAGACACCCACCTATGGTTAAATAGGTATTaGATGTTACCTGGCTGCATA | + |
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Preference number: 2 (lower is better) Translates to: TRILSCSAHALSLKDTHLWLNRY*MLPGCI Trigger: TATGCAGCCAGGTAACATTCAATACCTATTTAACCA...TAGGTGGGTGTCTTTCAGGGACAGAGCATGTGCAGAGCATGAAAGAATCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCAAGTGAACAGAGCCATCAGCCAGGAACTTTGTAGAGTAGATGGGTATGTGATTCTCTGCCATTTGTaGTTTCATGCCTTTGATCCT | + |
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Preference number: 2 (lower is better) Translates to: QQVNRAISQELCRVDGYVILCHL*FHAFDP Trigger: AGGATCAAAGGCATGAAAGCACAAATGGCAGAGAAT...CACATACCCATCTACTCTACAAAGTTCCTGGCTGATGGCTCTGTTCACTTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCTACAGGTTTTTGGTATaGACCTGGAGAAAACAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LSRQNSTMWTVENQKFQSYRFLV*TWRKQL Trigger: CAACTGTTTTCTCCAGGTGCATACCAAAAACCTGTA...GCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR-3UTR CCA 90 bp | AATAAGAAGGCAGCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGGTGTTTGTGGTAGTGTaGTTATTTTGTGGGAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: NKKAALAFQGRTVQCGQWVFVVV*LFCGRV Trigger: GACTCTCCCACAAAATAACCACACTACCACAAACAC...CCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGCTGCCTTCTTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| 3UTR CAA 90 bp | TGCTTCATAGGTTTGTTTAAGAGTAGCATATTTACTATATTTATATaGCTCAGCCAGCAGCACTGTGACGTGGGCCTAAATGAAGCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: CFIGLFKSSIFTIFI*LSQQHCDVGLNEAY Trigger: ATAAGCTTCATTTAGGCCCACGTCACAGTGCTGCTGGCTGAGCAATATAAATATAGTAAATATGCTACTCTTAAACAAACCTATGAAGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR CCA 72 bp | CAGCCATGGGTGTTCCTTGGAGAGGCAGAGGCCCGATaGTGCTCAGAGTGCCTCTTGCTGCTGCTGCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QPWVFLGEAEAR*CSECLLLLLLG Trigger: GCCTAGCAGCAGCAGCAAGAGGCACTCTGAGCACCATCGGGCCTCTGCCTCTCCAAGGAACACCCATGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR TCA 72 bp | CTGCTTGCTTCTAGGGTAGACTGTGCTTGGGCCTGGTaGGAGAGAGACTGCCCTGAGGGAGGCTGGAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LLASRVDCAWAW*ERDCPEGGWNP Trigger: GGGGTTCCAGCCTCCCTCAGGGCAGTCTCTCTCTCACCAGGCCCAAGCACAGTCTACCCTAGAAGCAAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | GGCCTCTCCTATTCCAATGCATGGGGCTCAGGGCCATaGGCTCACGATCCACCTTCCCATGGCACTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GLSYSNAWGSGP*AHDPPSHGTSS Trigger: AGAGGAAGTGCCATGGGAAGGTGGATCGTGAGCGCATGGCCCTGAGCCCCATGCATTGGAATAGGAGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | CACCTGCATGTTCTGCTTGGGCCTCTCCTATTCCAATaGATGGGGCTCAGGGCCATGCGCTCACGATCCACC | + |
|
Preference number: 3 (lower is better) Translates to: HLHVLLGPLLFQ*MGLRAMRSRST Trigger: GGTGGATCGTGAGCGCATGGCCCTGAGCCCCATGCATTGGAATAGGAGAGGCCCAAGCAGAACATGCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTCCATGGGAACTGCGCTAGCCCACGTGTCTaGCCTGTGAGAGCCAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLGTGARRAEMRSLHGNCASPRV*PVRARP Trigger: TGGCCTGGCTCTCACAGGCAAGACACGTGGGCTAGC...GCAGTTCCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR GCA 72 bp | TTCCTTGGAGAGGCAGAGGCCCGATGGTGCTCAGAGTaGCTCTTGCTGCTGCTGCTAGGCCTGATCATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLGEAEARWCSE*LLLLLLGLIML Trigger: AAGCATGATCAGGCCTAGCAGCAGCAGCAAGAGGCACTCTGAGCACCATCGGGCCTCTGCCTCTCCAAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR CCA 72 bp | TGCATGTTCTGCTTGGGCCTCTCCTATTCCAATGCATaGGGCTCAGGGCCATGCGCTCACGATCCACCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CMFCLGLSYSNA*GSGPCAHDPPS Trigger: GGAAGGTGGATCGTGAGCGCATGGCCCTGAGCCCCATGCATTGGAATAGGAGAGGCCCAAGCAGAACATGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR TCA 72 bp | CATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATaGGAAGCCTCCATGGGAACTGCTGCTCAGGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: HADLVQVLGEQR*EASMGTAAQGA Trigger: AGCGCCCTGAGCAGCAGTTCCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | CAGGGACCTTCCTGCCATTCTCAGATGTGGCTAGTTTaGCAGCTCCCTCTGTTAGACCCTCTGACCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QGPSCHSQMWLV*QLPLLDPLTQP Trigger: AGGCTGGGTCAGAGGGTCTAACAGAGGGAGCTGGCAAACTAGCCACATCTGAGAATGGCAGGAAGGTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR CCA 72 bp | CACGCAGCACTGTGGCACCAACAGGGGCTTTATTGGTaGGACTTAGAACTGCGGCAAACCCTGGCATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HAALWHQQGLYW*DLELRQTLACR Trigger: TCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR CCA 72 bp | CTTCACGCAGCACTGTGGCACCAACAGGGGCTTTATTaGTGGGACTTAGAACTGCGGCAAACCCTGGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LHAALWHQQGLY*WDLELRQTLAC Trigger: GCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGGTTATTTTGTGGGAGAGTCCCACCCCTCTCTGGGCAGTTTACCTGTAGCCCCTGGCATGCAGACTaGGTACAGGTGCTAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VWLFCGRVPPLSGQFTCSPWHAD*VQVLGE Trigger: CTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGG...GCTACAGGTAAACTGCCCAGAGAGGGGTGGGACTCTCCCACAAAATAACCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGACAGGGAGTCCTCGCTACCCTGACCTTTCCTCACTCATAAGCAGCCCTTGTGCTTTCATGCCTTaGATCCTGGAGGCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: AVTGSPRYPDLSSLISSPCAFMP*ILEADL Trigger: CAGGTCAGCCTCCAGGATCAAAGGCATGAAAGCACA...AGGGCTGCTTATGAGTGAGGAAAGGTCAGGGTAGCGAGGACTCCCTGTCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | TGCACTTTCCATGTCAGGCACACCAGCCTTCCTGCATaGATAACCATGGGATCGCCTGGTGGTGACCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: CTFHVRHTSLPA*ITMGSPGGDHA Trigger: AGCATGGTCACCACCAGGCGATCCCATGGTTATGCATGCAGGAAGGCTGGTGTGCCTGACATGGAAAGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR GCA 72 bp | AAGGCTAGCTGCCACTGCTCTGTACACTGGGGCATCTaGTACACCAGTCTCCCATCTGTGACTCACAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KASCHCSVHWGI*YTSLPSVTHRD Trigger: ATCCCTGTGAGTCACAGATGGGAGACTGGTGTAGCAGATGCCCCAGTGTACAGAGCAGTGGCAGCTAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCACCAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCTGCAGAAAACCCAAGTaGGTTCCTAGGATCCACATC | + |
|
Preference number: 3 (lower is better) Translates to: VAPTGALLVGLRTAANPGCRKPK*VPRIHI Trigger: GATGTGGATCCTAGGAACCAACTTGGGTTTTCTGCA...GCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | TATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCATaGAGACTTGGTACAGGTGCTAGGAGAGCAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: YWWDLELRQTLA*RLGTGARRAEM Trigger: CATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGCACCAGACCAAACTTCTACAGGGGGTTTAGTATACTCAACATGGTTGCCCCCTGGCATGCAGACTaGGTACAGGTGCTAGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ASTRPNFYRGFSILNMVAPWHAD*VQVLGE Trigger: CTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGG...GGCAACCATGTTGAGTATACTAAACCCCCTGTAGAAGTTTGGTCTGGTGCTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGACTGCCCTGAGGGAGGCTGGAACCCCTCTCTGTCAGTTACAGAAGCACCCAAGGATTCTCTGCCATTaGTGCTTTCATGCCTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ETALREAGTPLCQLQKHPRILCH*CFHAFD Trigger: ATCAAAGGCATGAAAGCACAAATGGCAGAGAATCCT...TGGGTGCTTCTGTAACTGACAGAGAGGGGTTCCAGCCTCCCTCAGGGCAGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | CACTGTGACGTGGGCCTAAATGAAGCTTATCTACTGTaGACTTTCCATGTCAGGCACACCAGCCTTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HCDVGLNEAYLL*TFHVRHTSLPA Trigger: TGCAGGAAGGCTGGTGTGCCTGACATGGAAAGTGCACAGTAGATAAGCTTCATTTAGGCCCACGTCACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR GCA 72 bp | ATTGATCTCTTTGGCTATCACAAGGCTAGCTGCCACTaGTCTGTACACTGGGGCATCTGCTACACCAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: IDLFGYHKASCH*SVHWGICYTSL Trigger: GAGACTGGTGTAGCAGATGCCCCAGTGTACAGAGCAGTGGCAGCTAGCCTTGTGATAGCCAAAGAGATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR CCA 72 bp | AGGGAGTATTTCTCAGACCACCTTCACGCAGCACTGTaGCACCAACAGGGGCTTTATTGGTGGGACTTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: REYFSDHLHAAL*HQQGLYWWDLE Trigger: TTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAGGTGGTCTGAGAAATACTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGATGCAGAGTCTGATTCCACAGAACTTTCATGTTGACTCTGACAGGAAGTGTGCTTTCATGCCTTaGATCCTGGAGGCTGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGMQSLIPQNFHVDSDRKCAFMP*ILEADL Trigger: CAGGTCAGCCTCCAGGATCAAAGGCATGAAAGCACA...CTTCCTGTCAGAGTCAACATGAAAGTTCTGTGGAATCAGACTCTGCATCCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR TCA 72 bp | TGTGGGATCTTTGGTCCCACGAGACTTAAGAGGCAATaGCTGCTGTCTTCACTCCAAGAGTTGTCTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CGIFGPTRLKRQ*LLSSLQELSAG Trigger: ACCTGCAGACAACTCTTGGAGTGAAGACAGCAGTCATTGCCTCTTAAGTCTCGTGGGACCAAAGATCCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR TCA 72 bp | CAGACAGGACGTCCTCTTCTGGTCTCCAAAGGCACCTaGCCTGCACTCACACCCACATATCTACACATAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QTGRPLLVSKGT*PALTPTYLHIN Trigger: ATTTATGTGTAGATATGTGGGTGTGAGTGCAGGTCAGGTGCCTTTGGAGACCAGAAGAGGACGTCCTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | ACTACTGGGTTCACAGCAGCACTCCATAGGATTCTCTaGCATTTGTGCTTTCATGCCTTTGATCCTGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TTGFTAALHRIL*HLCFHAFDPGG Trigger: GCCTCCAGGATCAAAGGCATGAAAGCACAAATGGCAGAGAATCCTATGGAGTGCTGCTGTGAACCCAGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | CTGTTTATTGATCTCTTTGGCTATCACAAGGCTAGCTaGCACTGCTCTGTACACTGGGGCATCTGCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: LFIDLFGYHKAS*HCSVHWGICYT Trigger: GGTGTAGCAGATGCCCCAGTGTACAGAGCAGTGGCAGCTAGCCTTGTGATAGCCAAAGAGATCAATAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR CCA 72 bp | GGAGCTAACGCAGAAAAGAATTCCCACCAGGTACCATaGAACACCTTACAGGCTCCCCAAGTCTCACCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GANAEKNSHQVP*NTLQAPQVSPF Trigger: AAAAGGTGAGACTTGGGGAGCCTGTAAGGTGTTCCATGGTACCTGGTGGGAATTCTTTTCTGCGTTAGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR CCA 72 bp | CTGTCAGTTACAGAAGCACCCAGGAAGCAGGCAACATaGCTGTTGCAGCAAATATTAGGGGTTCCTACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSVTEAPRKQAT*LLQQILGVPTP Trigger: AGGAGTAGGAACCCCTAATATTTGCTGCAACAGCCATGTTGCCTGCTTCCTGGGTGCTTCTGTAACTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | AAAAACACCAGTCGGCCACACGGTACCACAAACTGCTaGCAGCCAGGACAAGAAAACTGGCTGAAATATACT | + |
|
Preference number: 3 (lower is better) Translates to: KNTSRPHGTTNC*QPGQENWLKYT Trigger: AGTATATTTCAGCCAGTTTTCTTGTCCTGGCTGGCAGCAGTTTGTGGTACCGTGTGGCCGACTGGTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR GCA 72 bp | AACAAAAACACCAGTCGGCCACACGGTACCACAAACTaGTGCCAGCCAGGACAAGAAAACTGGCTGAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: NKNTSRPHGTTN*CQPGQENWLKY Trigger: ATATTTCAGCCAGTTTTCTTGTCCTGGCTGGCAGCAGTTTGTGGTACCGTGTGGCCGACTGGTGTTTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR GCA 72 bp | ACAGGTTTCCCAGGTATGAAGGCACAACATACTTATTaGCTAGTACTGCGCTCAATAGCTCTGTCTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TGFPGMKAQHTY*LVLRSIALSAV Trigger: CACAGCAGACAGAGCTATTGAGCGCAGTACTAGGCAATAAGTATGTTGTGCCTTCATACCTGGGAAACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR CCA 72 bp | ATGAGCCTGTTGGGAGTGAAAGAGAAGGAAAGTAGATaGTTAGCAAGGTCAGCTCAGCAAGGCTTTGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MSLLGVKEKESR*LARSAQQGFVD Trigger: GTCTACAAAGCCTTGCTGAGCTGACCTTGCTAACCATCTACTTTCCTTCTCTTTCACTCCCAACAGGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR TCA 72 bp | ACCTACTTCACTTCCCCTCACTTCCTGATGGCTACTTaGGTTCCCCAACCTTCTTCAACCAAGAGTAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: TYFTSPHFLMAT*VPQPSSTKSNF Trigger: GAAATTACTCTTGGTTGAAGAAGGTTGGGGAACTCAAGTAGCCATCAGGAAGTGAGGGGAAGTGAAGTAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR TCA 72 bp | TACACTGGGGCATCTGCTACACCAGTCTCCCATCTGTaGCTCACAGGGATTTCAGAATTGATTTGTTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: YTGASATPVSHL*LTGISELICST Trigger: AGTAGAACAAATCAATTCTGAAATCCCTGTGAGTCACAGATGGGAGACTGGTGTAGCAGATGCCCCAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR GCA 72 bp | AGGAAATACAAGCTTGCTTCAACCATAACACGTCTATaGATCATCTTACTGCCACCTTCACAGGTCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RKYKLASTITRL*IILLPPSQVLL Trigger: GAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120473.8 ENSMUST00000132417.8 |
||
| 3UTR GCA 72 bp | TTTTTATGGTCCTCGAGTATAACCAGGATTCTTTCATaGTCTGCACATGCTCTGTCCCTGAAAGACACCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLWSSSITRILS*SAHALSLKDTH Trigger: GTGGGTGTCTTTCAGGGACAGAGCATGTGCAGAGCATGAAAGAATCCTGGTTATACTCGAGGACCATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGGCAGCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAAACTCCACTATCGTCTaGAACTTCTCATTGTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: KKAALAFQGRTVQCGQWRNSTIV*NFSLSS Trigger: TGAAGACAATGAGAAGTTCAAGACGATAGTGGAGTT...TCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGCTGCCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| 3UTR CCA 72 bp | CACTGTTATAAATTTGAGGTAAAATCCTTGTTAGTTTaGGGAGCGGGTCTATTTTCTGGCTGTTGTATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HCYKFEVKSLLV*GAGLFSGCCIF Trigger: AAAAATACAACAGCCAGAAAATAGACCCGCTCCCCAAACTAACAAGGATTTTACCTCAAATTTATAACAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR CAA 72 bp | CGGGTGACCGTTCAGCAGAGCAGCCATGGGTGTTCCTaGGAGAGGCAGAGGCCCGATGGTGCTCAGAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVTVQQSSHGCS*ERQRPDGAQSA Trigger: GGCACTCTGAGCACCATCGGGCCTCTGCCTCTCCAAGGAACACCCATGGCTGCTCTGCTGAACGGTCACCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAATTTCGGGCATTGCTAGCCCACGTGTCTTGCCTGTGAGAGCCAGGCCAGGACCATGGAGGCACTaGCTCGGCCTCCTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: REISGIASPRVLPVRARPGPWRH*LGLLSA Trigger: CGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCC...TGGCCTGGCTCTCACAGGCAAGACACGTGGGCTAGCAATGCCCGAAATTTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119394.8 ENSMUST00000132417.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACCAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCACTGGCCGAAGGTTCGTaGCGTTCTCCAGCGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WHQQGLYWWDLELRQTLALAEGS*RSPAWL Trigger: AAGCCACGCTGGAGAACGTCACGAACCTTCGGCCAG...TGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000135454.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAATTTCGGGCATTGCTAGCCCACGTGTCTTGCCTGTGAGAGCCAGGCCAGAAGTCCTCGCCCACTaGCCGAAGGTTCGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: REISGIASPRVLPVRARPEVLAH*PKVRDV Trigger: AACGTCACGAACCTTCGGCCAGTGGGCGAGGACTTC...TGGCCTGGCTCTCACAGGCAAGACACGTGGGCTAGCAATGCCCGAAATTTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119394.8 ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTGACAGGGAGTCCTCGCTACCCTGACCTTTCCTCACTCATAAGCAGCCCTGCAGCAAACCCAGCCTaGGGCTGGAAGTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVTGSPRYPDLSSLISSPAANPA*GWKSTG Trigger: ACCAGTTGACTTCCAGCCCCAGGCTGGGTTTGCTGC...AGGGCTGCTTATGAGTGAGGAAAGGTCAGGGTAGCGAGGACTCCCTGTCACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR CAA 72 bp | GCAGGGACCTTCCTGCCATTCTCAGATGTGGCTAGTTaGCCAGCTCCCTCTGTTAGACCCTCTGACCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGTFLPFSDVAS*PAPSVRPSDPA Trigger: GGCTGGGTCAGAGGGTCTAACAGAGGGAGCTGGCAAACTAGCCACATCTGAGAATGGCAGGAAGGTCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGCATTGCTAGCCCACGTGTCTTGCCTGTGAGAGCCAGGCCAATGATCAAAACTGAAGACTGTCCCTaGCTCCACACCGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGIASPRVLPVRARPMIKTEDCP*LHTVSS Trigger: GCTGCTGACGGTGTGGAGTCAGGGACAGTCTTCAGT...TTTGATCATTGGCCTGGCTCTCACAGGCAAGACACGTGGGCTAGCAATGCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
||
| CDS-3UTR TCA 90 bp | GCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTCCATGGGACTGAAGACTGTCCCTaGCTCCACACCGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACRLGTGARRAEMRSLHGTEDCP*LHTVSS Trigger: GCTGCTGACGGTGTGGAGTCAGGGACAGTCTTCAGT...CCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGTCCTCCTCAGAACCCTGGCCTGCTAGAGCTGGACTCTAGCCACTGCCCTGGCTTTGAGCTGCAGTaGGATTTTCTGAGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TGPPQNPGLLELDSSHCPGFELQ*DFLRRG Trigger: CCCTCTTCTCAGAAAATCGCACTGCAGCTCAAAGCC...AGGGCAGTGGCTAGAGTCCAGCTCTAGCAGGCCAGGGTTCTGAGGAGGACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCCTGGCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCGGGCTGGAAGTCAACTaGTTCAAGGCCCCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QTLACRLGTGARRAEMRSGLEVN*FKAPAL Trigger: GAGTGCCGGGGCCTTGAACCAGTTGACTTCCAGCCC...GCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| CDS-3UTR CCA 90 bp | AGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTCCATGGGAACTGCGGGCTGGAAGTCAACTaGTTCAAGGCCCCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTGARRAEMRSLHGNCGLEVN*FKAPAL Trigger: GAGTGCCGGGGCCTTGAACCAGTTGACTTCCAGCCC...GCAGTTCCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| CDS-3UTR CCA 90 bp | CCAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCATGCAGGCAGCAAACCCAGCCTaGGGCTGGAAGTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTGALLVGLRTAANPGMQAANPA*GWKSTG Trigger: ACCAGTTGACTTCCAGCCCCAGGCTGGGTTTGCTGC...CTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| 3UTR CAA 72 bp | CCTTCACGCAGCACTGTGGCACCAACAGGGGCTTTATaGGTGGGACTTAGAACTGCGGCAAACCCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSTVAPTGAL*VGLRTAANPGM Trigger: CATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | ATGCATCATCTTACTGCCACCTTCACAGGTCCTCCTCAGAACCCTGGCCTGCTAACTGAAGACTGTCCCTaGCTCCACACCGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MHHLTATFTGPPQNPGLLTEDCP*LHTVSS Trigger: GCTGCTGACGGTGTGGAGTCAGGGACAGTCTTCAGT...TAGCAGGCCAGGGTTCTGAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120473.8 |
||
| CDS-3UTR TCA 90 bp | ATGCATCATCTTACTGCCACCTTCACAGGTCCTCCTCAGAACCCTGGCCTGCTATGCAGTGCGATTTTCTaGGAAGAGGGCGGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: MHHLTATFTGPPQNPGLLCSAIF*EEGGTR Trigger: GCGTGTCCCGCCCTCTTCTCAGAAAATCGCACTGCA...TAGCAGGCCAGGGTTCTGAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGGCTCTGACTCAGGACCATGGAGGCACTaGCTCGGCCTCCTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NVDSGEPEVPKPNPGSDSGPWRH*LGLLSA Trigger: CGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCC...TGAGTCAGAGCCTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | CAAACCCTGGCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCGCAGCAAACCCAGCCTaGGGCTGGAAGTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTLACRLGTGARRAEMRSAANPA*GWKSTG Trigger: ACCAGTTGACTTCCAGCCCCAGGCTGGGTTTGCTGC...GCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000134254.2 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | TCTATGCATCATCTTACTGCCACCTTCACAGGTCCTCCTCAGAACCCTGGCCTGTCTCCAGCGTGGCTTTaGGCTGCAGTGCGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMHHLTATFTGPPQNPGLSPAWL*AAVRFS Trigger: GGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGA...CAGGCCAGGGTTCTGAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120473.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGTGAACAGAGCCATCAGCCAGGAACTTTGTAGAGTAGATGGGTATGTGGGACCATGGAGGCACTaGCTCGGCCTCCTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QQVNRAISQELCRVDGYVGPWRH*LGLLSA Trigger: CGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCC...CACATACCCATCTACTCTACAAAGTTCCTGGCTGATGGCTCTGTTCACTTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR GCA 90 bp | CTCTCCTTAGTTCTTACAGGCAAGTTTGCGGGCAGACAGTTCAGCACTTCACAAGGACCATGGAGGCACTaGCTCGGCCTCCTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSLVLTGKFAGRQFSTSQGPWRH*LGLLSA Trigger: CGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCC...TTGTGAAGTGCTGAACTGTCTGCCCGCAAACTTGCCTGTAAGAACTAAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTAATGGAGGGAGTATTTCTCAGACCACCTTCACGCAGCACTGTGGCACCGGGCTGGAAGTCAACTaGTTCAAGGCCCCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LINGGSISQTTFTQHCGTGLEVN*FKAPAL Trigger: GAGTGCCGGGGCCTTGAACCAGTTGACTTCCAGCCC...GGTGCCACAGTGCTGCGTGAAGGTGGTCTGAGAAATACTCCCTCCATTAATAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | GTGGCACCAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCGTATTGCCACTTCTCTaGAATCTCACCACAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAPTGALLVGLRTAANPGVLPLL*NLTTVA Trigger: GGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATAC...GCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGTCCTCCTCAGAACCCTGGCCTGCTAGAGCTGGACTCTAGCCACTGCCCTACTCCACTATCGTCTTaGACTTCTCATTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGPPQNPGLLELDSSHCPTPLSS*TSHCLQ Trigger: CTGAAGACAATGAGAAGTTCAAGACGATAGTGGAGT...AGGGCAGTGGCTAGAGTCCAGCTCTAGCAGGCCAGGGTTCTGAGGAGGACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120473.8 |
||
| CDS-3UTR TCA 90 bp | TCTATGCATCATCTTACTGCCACCTTCACAGGTCCTCCTCAGAACCCTGGCCTGTCTCCAGCGTGGCTTTaGGCTGCAGTGCGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMHHLTATFTGPPQNPGLSPAWL*AAVRFS Trigger: AGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGA...CAGGCCAGGGTTCTGAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCATAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGGCGAAGTCCTCGCCCACTaGCCGAAGGTTCGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: EQYNVDSGEPEVPKPNPGEVLAH*PKVRDV Trigger: AACGTCACGAACCTTCGGCCAGTGGGCGAGGACTTC...GCCTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | TATTGCCTAGTACTGCGCTCAATAGCTCTGTCTGCTGTGTGGGATCTTTGGTCCGAAGTCCTCGCCCACTaGCCGAAGGTTCGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: YCLVLRSIALSAVWDLWSEVLAH*PKVRDV Trigger: AACGTCACGAACCTTCGGCCAGTGGGCGAGGACTTC...GGACCAAAGATCCCACACAGCAGACAGAGCTATTGAGCGCAGTACTAGGCAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | GGTTTAGTATACTCAACATGGTTGCCAGACTCGAAGGGAGGAAAAGCAGGGACCTCTCCAGCGTGGCTTTaGGCTGCAGTGCGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLVYSTWLPDSKGGKAGTSPAWL*AAVRFS Trigger: GGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGA...GGTCCCTGCTTTTCCTCCCTTCGAGTCTGGCAACCATGTTGAGTATACTAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGCATTGCTAGCCCACGTGTCTTGCCTGTGAGAGCCAGGCCAATGATCAAAGTATTGCCACTTCTCTaGAATCTCACCACAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGIASPRVLPVRARPMIKVLPLL*NLTTVA Trigger: GGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATAC...TTTGATCATTGGCCTGGCTCTCACAGGCAAGACACGTGGGCTAGCAATGCCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119394.8 ENSMUST00000132417.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTCCTTAGTTCTTACAGGCAAGTTTGCGGGCAGACAGTTCAGCACTTCAACTGAAGACTGTCCCTaGCTCCACACCGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSLVLTGKFAGRQFSTSTEDCP*LHTVSS Trigger: GCTGCTGACGGTGTGGAGTCAGGGACAGTCTTCAGT...TGAAGTGCTGAACTGTCTGCCCGCAAACTTGCCTGTAAGAACTAAGGAGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000134254.2 |
||
| CDS-3UTR TCA 90 bp | GGAACTACTGGGTTCACAGCAGCACTCCATAGGATTCTCTGCCATTTGTGCTTTACTGAAGACTGTCCCTaGCTCCACACCGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GTTGFTAALHRILCHLCFTEDCP*LHTVSS Trigger: GCTGCTGACGGTGTGGAGTCAGGGACAGTCTTCAGT...AAAGCACAAATGGCAGAGAATCCTATGGAGTGCTGCTGTGAACCCAGTAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGATGCAGAGTCTGATTCCACAGAACTTTCATGTTGACTCTGACAGGAAGTGCAGTGCGATTTTCTaGGAAGAGGGCGGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: QGMQSLIPQNFHVDSDRKCSAIF*EEGGTR Trigger: GCGTGTCCCGCCCTCTTCTCAGAAAATCGCACTGCA...CTTCCTGTCAGAGTCAACATGAAAGTTCTGTGGAATCAGACTCTGCATCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125107.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCAGCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAACCGAAGTCCTCGCCCACTaGCCGAAGGTTCGTGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAALAFQGRTVQCGQWRTEVLAH*PKVRDV Trigger: AACGTCACGAACCTTCGGCCAGTGGGCGAGGACTTC...GGTTCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGCTGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGGCAGCAAACCCAGCCTaGGGCTGGAAGTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSTMWTVENQKFQSPIQAANPA*GWKSTG Trigger: ACCAGTTGACTTCCAGCCCCAGGCTGGGTTTGCTGC...CTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
||
| CDS-3UTR TCA 90 bp | TCTATGCATCATCTTACTGCCACCTTCACAGGTCCTCCTCAGAACCCTGGCCTGGTATTGCCACTTCTCTaGAATCTCACCACAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SMHHLTATFTGPPQNPGLVLPLL*NLTTVA Trigger: GGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATAC...CAGGCCAGGGTTCTGAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120473.8 ENSMUST00000132417.8 |
||
| CDS-3UTR TCA 90 bp | AGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTCCATGGGAACTGCGTATTGCCACTTCTCTaGAATCTCACCACAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGTGARRAEMRSLHGNCVLPLL*NLTTVA Trigger: GGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATAC...GCAGTTCCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAGGCAGCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAACTGAAGACTGTCCCTaGCTCCACACCGTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKAALAFQGRTVQCGQWRTEDCP*LHTVSS Trigger: GCTGCTGACGGTGTGGAGTCAGGGACAGTCTTCAGT...TCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGCTGCCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
||
| CDS-3UTR TCA 90 bp | CAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCATGCAGACAGCACTTCACAAACTaGTGGGTGACCTCGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: QQGLYWWDLELRQTLACRQHFTN*WVTSKI Trigger: GATTTTCGAGGTCACCCATCAGTTTGTGAAGTGCTG...TCTGCATGCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR GCA 90 bp | CTATTCCAATGCATGGGGCTCAGGGCCATGCGCTCACGATCCACCTTCCCATGGGTCCAGTCCTTTTCTTaGAGATTAATGTCACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFQCMGLRAMRSRSTFPWVQSFS*RLMSLK Trigger: CTTCAGTGACATTAATCTGCAAGAAAAGGACTGGAC...CCATGGGAAGGTGGATCGTGAGCGCATGGCCCTGAGCCCCATGCATTGGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| 3UTR CAA 72 bp | ACTGCGCTCAATAGCTCTGTCTGCTGTGTGGGATCTTaGGTCCCACGAGACTTAAGAGGCAATGACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TALNSSVCCVGS*VPRDLRGNDCC Trigger: ACAGCAGTCATTGCCTCTTAAGTCTCGTGGGACCAAAGATCCCACACAGCAGACAGAGCTATTGAGCGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| 3UTR CAA 72 bp | GTTACAGAAGCACCCAGGAAGCAGGCAACATGGCTGTaGCAGCAAATATTAGGGGTTCCTACTCCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTEAPRKQATWL*QQILGVPTPPW Trigger: CCAAGGAGGAGTAGGAACCCCTAATATTTGCTGCAACAGCCATGTTGCCTGCTTCCTGGGTGCTTCTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTACTGGGTTCACAGCAGCACTCCATAGGATTCTCTGCCATTTGTGCTTTTCTCCAGCGTGGCTTTaGGCTGCAGTGCGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTTGFTAALHRILCHLCFSPAWL*AAVRFS Trigger: AGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGA...AAAGCACAAATGGCAGAGAATCCTATGGAGTGCTGCTGTGAACCCAGTAGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125107.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGGAGGAAATACAAGCTTGCTTCAACCATAACACGTCTATGCATCATCTTGGACCATGGAGGCACTaGCTCGGCCTCCTTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: EQEEIQACFNHNTSMHHLGPWRH*LGLLSA Trigger: CGCTGAAAGGAGGCCGAGGCAGTGCCTCCATGGTCC...AAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCTCCTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120473.8 ENSMUST00000132417.8 |
||
| CDS-3UTR CCA 90 bp | AGATTTACAGGAGTAGGAAATAAGAACAGGGAAATTTCGGGCATTGCTAGCCCAGGGCTGGAAGTCAACTaGTTCAAGGCCCCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RFTGVGNKNREISGIASPGLEVN*FKAPAL Trigger: GAGTGCCGGGGCCTTGAACCAGTTGACTTCCAGCCC...TGGGCTAGCAATGCCCGAAATTTCCCTGTTCTTATTTCCTACTCCTGTAAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGATGTGAGATTTACAGGAGTAGGAAATAAGAACAGGGAAATTTCGGGCGCAGCAAACCCAGCCTaGGGCTGGAAGTCAACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLDVRFTGVGNKNREISGAANPA*GWKSTG Trigger: ACCAGTTGACTTCCAGCCCCAGGCTGGGTTTGCTGC...GCCCGAAATTTCCCTGTTCTTATTTCCTACTCCTGTAAATCTCACATCCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
||
| CDS-3UTR TCA 90 bp | AATAAGAAGGCAGCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGTCTCCAGCGTGGCTTTaGGCTGCAGTGCGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKKAALAFQGRTVQCGQWSPAWL*AAVRFS Trigger: GGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGA...CCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGCTGCCTTCTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
||
| CDS-3UTR TCA 90 bp | CAGCTGGATGTGAGATTTACAGGAGTAGGAAATAAGAACAGGGAAATTTCGGGCTCTCCAGCGTGGCTTTaGGCTGCAGTGCGATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLDVRFTGVGNKNREISGSPAWL*AAVRFS Trigger: GGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGA...GCCCGAAATTTCCCTGTTCTTATTTCCTACTCCTGTAAATCTCACATCCAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCACGCAGCACTGTGGCACCAACAGGGGCTTTATTGGTGGGACTTAGAACTACTCCACTATCGTCTTaGACTTCTCATTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSTVAPTGALLVGLRTTPLSS*TSHCLQ Trigger: CTGAAGACAATGAGAAGTTCAAGACGATAGTGGAGT...AGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCACAGTGCTGCGTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTACTGGGTTCACAGCAGCACTCCATAGGATTCTCTGCCATTTGTGCTTTGGCTTTGAGCTGCAGTaGGATTTTCTGAGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTTGFTAALHRILCHLCFGFELQ*DFLRRG Trigger: CCCTCTTCTCAGAAAATCGCACTGCAGCTCAAAGCC...AAAGCACAAATGGCAGAGAATCCTATGGAGTGCTGCTGTGAACCCAGTAGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125107.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGGAGGAAATACAAGCTTGCTTCAACCATAACACGTCTATGCATCATCTTGGGCTGGAAGTCAACTaGTTCAAGGCCCCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: EQEEIQACFNHNTSMHHLGLEVN*FKAPAL Trigger: GAGTGCCGGGGCCTTGAACCAGTTGACTTCCAGCCC...AAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCTCCTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120473.8 |
||
| 3UTR CAA 72 bp | GGATGTTCTTCTTGTGTTTGTGGTAGTGTGGTTATTTaGTGGGAGAGTCCCACCCCTCTCTGGGCAGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSCVCGSVVI*WESPTPLWAVY Trigger: GTAAACTGCCCAGAGAGGGGTGGGACTCTCCCACAAAATAACCACACTACCACAAACACAAGAAGAACATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTTAGTTCTTACAGGCAAGTTTGCGGGCAGACAGTTCAGCACTTCACAAGTATTGCCACTTCTCTaGAATCTCACCACAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLVLTGKFAGRQFSTSQVLPLL*NLTTVA Trigger: GGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATAC...TTGTGAAGTGCTGAACTGTCTGCCCGCAAACTTGCCTGTAAGAACTAAGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTCCAAAGCCCAATCCAGGCTCTGACTCAGCTAGTCATGAACGCAGGAGACACTCCACTATCGTCTTaGACTTCTCATTGTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFQSPIQALTQLVMNAGDTPLSS*TSHCLQ Trigger: CTGAAGACAATGAGAAGTTCAAGACGATAGTGGAGT...GTCTCCTGCGTTCATGACTAGCTGAGTCAGAGCCTGGATTGGGCTTTGGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
||
| CDS-3UTR TCA 90 bp | TTATTAATGGAGGGAGTATTTCTCAGACCACCTTCACGCAGCACTGTGGCACCACAGCACTTCACAAACTaGTGGGTGACCTCGAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: LLMEGVFLRPPSRSTVAPQHFTN*WVTSKI Trigger: GATTTTCGAGGTCACCCATCAGTTTGTGAAGTGCTG...TGGTGCCACAGTGCTGCGTGAAGGTGGTCTGAGAAATACTCCCTCCATTAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
||
| CDS-3UTR TCA 90 bp | CAAACCCTGGCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCTCATTTTCCCAAACTTaGGTTCCTTCCTTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTLACRLGTGARRAEMRSSFSQT*VPSFSC Trigger: GCAAGAAAAGGAAGGAACTCAAGTTTGGGAAAATGA...GCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134254.2 |
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| CDS-3UTR CCA 90 bp | GAACAGGAGGAAATACAAGCTTGCTTCAACCATAACACGTCTATGCATCATCTTGAAGTCCTCGCCCACTaGCCGAAGGTTCGTGACGTT | + |
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Preference number: 4 (lower is better) Translates to: EQEEIQACFNHNTSMHHLEVLAH*PKVRDV Trigger: AACGTCACGAACCTTCGGCCAGTGGGCGAGGACTTC...AAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCTCCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120473.8 ENSMUST00000132417.8 |
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| CDS-3UTR CCA 90 bp | GAACAGGAGGAAATACAAGCTTGCTTCAACCATAACACGTCTATGCATCATCTTGCAGCAAACCCAGCCTaGGGCTGGAAGTCAACTGGT | + |
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Preference number: 4 (lower is better) Translates to: EQEEIQACFNHNTSMHHLAANPA*GWKSTG Trigger: ACCAGTTGACTTCCAGCCCCAGGCTGGGTTTGCTGC...AAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCTCCTGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120473.8 |
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| CDS-3UTR TCA 90 bp | GCATTAGCCTTTCAAGGCAGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTGTATTGCCACTTCTCTaGAATCTCACCACAGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ALAFQGRTVQCGQWRTRSVLPLL*NLTTVA Trigger: GGCAACTGTGGTGAGATTTCAGAGAAGTGGCAATAC...ACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTGCCTTGAAAGGCTAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
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| CDS-3UTR TCA 90 bp | GTAGGAAATAAGAACAGGGAAATTTCGGGCATTGCTAGCCCACGTGTCTTGCCTACTCCACTATCGTCTTaGACTTCTCATTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VGNKNREISGIASPRVLPTPLSS*TSHCLQ Trigger: CTGAAGACAATGAGAAGTTCAAGACGATAGTGGAGT...AGGCAAGACACGTGGGCTAGCAATGCCCGAAATTTCCCTGTTCTTATTTCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
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| CDS-3UTR TCA 90 bp | GTGCTTCAGGGGATGCAGAGTCTGATTCCACAGAACTTTCATGTTGACTCTGACACTCCACTATCGTCTTaGACTTCTCATTGTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VLQGMQSLIPQNFHVDSDTPLSS*TSHCLQ Trigger: CTGAAGACAATGAGAAGTTCAAGACGATAGTGGAGT...GTCAGAGTCAACATGAAAGTTCTGTGGAATCAGACTCTGCATCCCCTGAAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR CAA 72 bp | AACAGGTTTCCCAGGTATGAAGGCACAACATACTTATaGCCTAGTACTGCGCTCAATAGCTCTGTCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NRFPRYEGTTYL*PSTALNSSVCC Trigger: ACAGCAGACAGAGCTATTGAGCGCAGTACTAGGCAATAAGTATGTTGTGCCTTCATACCTGGGAAACCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| 3UTR CAA 72 bp | CTTGCTGCTGCTGCTAGGCCTGATCATGCTTCATACTaGGATGTTCTTCTTGTGTTTGTGGTAGTGTGGTTA | + |
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Preference number: 4 (lower is better) Translates to: LAAAARPDHASY*DVLLVFVVVWL Trigger: TAACCACACTACCACAAACACAAGAAGAACATCCAAGTATGAAGCATGATCAGGCCTAGCAGCAGCAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGTCATTTTCCCAAACTTaGGTTCCTTCCTGGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: QNSTMWTVENQKFQSPIQSFSQT*VPSWRK Trigger: TTTTCTCCAGGAAGGAACTCAAGTTTGGGAAAATGA...CTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
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| CDS-3UTR GCA 90 bp | GTAGGAAATAAGAACAGGGAAATTTCGGGCATTGCTAGCCCACGTGTCTTGCCTTACAGGTTTTTGGTATaGACCTGGAGAAAACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VGNKNREISGIASPRVLPYRFLV*TWRKQL Trigger: CAACTGTTTTCTCCAGGTGCATACCAAAAACCTGTA...AGGCAAGACACGTGGGCTAGCAATGCCCGAAATTTCCCTGTTCTTATTTCCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
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| CDS-3UTR GCA 90 bp | TTCTCTCCAGTAGAATATTGGAGAAATAGTGTGTGGAAACAGGTTTCCCAGGTAGTCCAGTCCTTTTCTTaGAGATTAATGTCACTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSPVEYWRNSVWKQVSQVVQSFS*RLMSLK Trigger: CTTCAGTGACATTAATCTGCAAGAAAAGGACTGGAC...TACCTGGGAAACCTGTTTCCACACACTATTTCTCCAATATTCTACTGGAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| CDS GCA 90 bp | TGGCCGAAGGTTCGTGACGTTCTCCAGCGTGGCTTTGAGCTGCAGTaGGATTTTCTGAGAAGAGGGCGGGACACGCTGAGTGCAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: WPKVRDVLQRGFELQ*DFLRRGRDTLSARP Trigger: AGGCCTTGCACTCAGCGTGTCCCGCCCTCTTCTCAGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAACGTCACGAACCTTCGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000132417.8 |
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| CDS-3UTR CAA 90 bp | CGGCAAACCCTGGCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGATTCTCCAGCGTGGCTTaGAGCTGCAGTGCGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: RQTLACRLGTGARRAEMRFSSVA*SCSAIF Trigger: GAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAA...TCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000132417.8 ENSMUST00000135454.8 |
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| CDS-3UTR CAA 90 bp | ACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGGCTCTTCTCCAGCGTGGCTTaGAGCTGCAGTGCGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: TVQCGQWRTRSSKAQSRLFSSVA*SCSAIF Trigger: GAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAA...GAGCCTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106727.10 ENSMUST00000132417.8 |
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| CDS-3UTR CAA 90 bp | GCACAAACATCTGGAGCTAACGCAGAAAAGAATTCCCACCAGGTACCATGGAACTTCTCCAGCGTGGCTTaGAGCTGCAGTGCGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: AQTSGANAEKNSHQVPWNFSSVA*SCSAIF Trigger: GAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAA...GTTCCATGGTACCTGGTGGGAATTCTTTTCTGCGTTAGCTCCAGATGTTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132417.8 |
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| CDS-3UTR CAA 90 bp | AGGGAAATTTCGGGCATTGCTAGCCCACGTGTCTTGCCTGTGAGAGCCAGGCCAAACTCCACTATCGTCTaGAACTTCTCATTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: REISGIASPRVLPVRARPNSTIV*NFSLSS Trigger: TGAAGACAATGAGAAGTTCAAGACGATAGTGGAGTT...TGGCCTGGCTCTCACAGGCAAGACACGTGGGCTAGCAATGCCCGAAATTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
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| CDS-3UTR CAA 90 bp | GTGGCACCAACAGGGGCTTTATTGGTGGGACTTAGAACTGCGGCAAACCCTGGCTGTCCAGTCCTTTTCTaGCAGATTAATGTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: VAPTGALLVGLRTAANPGCPVLF*QINVTE Trigger: TTCAGTGACATTAATCTGCAAGAAAAGGACTGGACA...GCCAGGGTTTGCCGCAGTTCTAAGTCCCACCAATAAAGCCCCTGTTGGTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| CDS-3UTR CAA 90 bp | AACTGCGGCAAACCCTGGCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGAAACTCCACTATCGTCTaGAACTTCTCATTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: NCGKPWHADLVQVLGEQRNSTIV*NFSLSS Trigger: TGAAGACAATGAGAAGTTCAAGACGATAGTGGAGTT...TCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGCCAGGGTTTGCCGCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| CDS-3UTR CAA 90 bp | TCTATGCATCATCTTACTGCCACCTTCACAGGTCCTCCTCAGAACCCTGGCCTGAACTCCACTATCGTCTaGAACTTCTCATTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SMHHLTATFTGPPQNPGLNSTIV*NFSLSS Trigger: TGAAGACAATGAGAAGTTCAAGACGATAGTGGAGTT...CAGGCCAGGGTTCTGAGGAGGACCTGTGAAGGTGGCAGTAAGATGATGCATAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120473.8 |
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| CDS-3UTR CAA 90 bp | AGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTCCATGGGAACTGCAACTCCACTATCGTCTaGAACTTCTCATTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RLGTGARRAEMRSLHGNCNSTIV*NFSLSS Trigger: TGAAGACAATGAGAAGTTCAAGACGATAGTGGAGTT...GCAGTTCCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106727.10 ENSMUST00000125107.8 ENSMUST00000135454.8 |
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| CDS-3UTR CAA 90 bp | GCATGCAGACTTGGTACAGGTGCTAGGAGAGCAGAGATGAGAAGCCTCCATGGGAGTTCCTTCCTTTTCTaGCAGATTAATGTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: ACRLGTGARRAEMRSLHGSSFLF*QINVTE Trigger: TTCAGTGACATTAATCTGCAAGAAAAGGAAGGAACT...CCCATGGAGGCTTCTCATCTCTGCTCTCCTAGCACCTGTACCAAGTCTGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134254.2 |
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| CDS-3UTR CAA 90 bp | GTGAGATTTACAGGAGTAGGAAATAAGAACAGGGAAATTTCGGGCATTGCTAGCTTCTCCAGCGTGGCTTaGAGCTGCAGTGCGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: VRFTGVGNKNREISGIASFSSVA*SCSAIF Trigger: GAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAA...GCTAGCAATGCCCGAAATTTCCCTGTTCTTATTTCCTACTCCTGTAAATCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119394.8 ENSMUST00000132417.8 |
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| CDS-3UTR CAA 90 bp | GAACAGGAGGAAATACAAGCTTGCTTCAACCATAACACGTCTATGCATCATCTTTTCTCCAGCGTGGCTTaGAGCTGCAGTGCGATTTTC | + |
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Preference number: 5 (lower is better) Translates to: EQEEIQACFNHNTSMHHLFSSVA*SCSAIF Trigger: GAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAA...AAGATGATGCATAGACGTGTTATGGTTGAAGCAAGCTTGTATTTCCTCCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120473.8 ENSMUST00000132417.8 |
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| CDS-3UTR CAA 90 bp | AGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGGGTCATTTTCCCAAACTaGAGTTCCTTCCTGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RTVQCGQWRTRSSKAQSRVIFPN*SSFLEK Trigger: TTTCTCCAGGAAGGAACTCAAGTTTGGGAAAATGAC...CCTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
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| CDS-3UTR CAA 90 bp | CAGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGAACTCCACTATCGTCTaGAACTTCTCATTGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QNSTMWTVENQKFQSPIQNSTIV*NFSLSS Trigger: TGAAGACAATGAGAAGTTCAAGACGATAGTGGAGTT...CTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
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| CDS-3UTR CAA 90 bp | AGAACAGTACAATGTGGACAGTGGAGAACCAGAAGTTCCAAAGCCCAATCCAGGCACATGAGCCTTTTCTaGCAGATTAATGTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: RTVQCGQWRTRSSKAQSRHMSLF*QINVTE Trigger: TTCAGTGACATTAATCTGCAAGAAAAGGCTCATGTG...CCTGGATTGGGCTTTGGAACTTCTGGTTCTCCACTGTCCACATTGTACTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106727.10 |
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| CDS-3UTR CAA 90 bp | GTAGGAAATAAGAACAGGGAAATTTCGGGCATTGCTAGCCCACGTGTCTTGCCTCACATGAGCCTTTTCTaGCAGATTAATGTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: VGNKNREISGIASPRVLPHMSLF*QINVTE Trigger: TTCAGTGACATTAATCTGCAAGAAAAGGCTCATGTG...AGGCAAGACACGTGGGCTAGCAATGCCCGAAATTTCCCTGTTCTTATTTCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119394.8 |
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| CDS-3UTR CAA 90 bp | TTCTACAGGGGGTTTAGTATACTCAACATGGTTGCCAGACTCGAAGGGAGGAAATGTCCAGTCCTTTTCTaGCAGATTAATGTCACTGAA | + |
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Preference number: 5 (lower is better) Translates to: FYRGFSILNMVARLEGRKCPVLF*QINVTE Trigger: TTCAGTGACATTAATCTGCAAGAAAAGGACTGGACA...TTTCCTCCCTTCGAGTCTGGCAACCATGTTGAGTATACTAAACCCCCTGTAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135454.8 |
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| CDS GCA 72 bp | GTTCGTGACGTTCTCCAGCGTGGCTTTGAGCTGCAGTaGGATTTTCTGAGAAGAGGGCGGGACACGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: VRDVLQRGFELQ*DFLRRGRDTLS Trigger: ACTCAGCGTGTCCCGCCCTCTTCTCAGAAAATCGCACTGCAGCTCAAAGCCACGCTGGAGAACGTCACGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000125107.8 ENSMUST00000132417.8 |
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| CDS CCA 72 bp | TTTCATCTTCAGGTACCACCGGAAGTCCTCGCCCACTaGCCGAAGGTTCGTGACGTTCTCCAGCGTGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FHLQVPPEVLAH*PKVRDVLQRGF Trigger: AAAGCCACGCTGGAGAACGTCACGAACCTTCGGCCAGTGGGCGAGGACTTCCGGTGGTACCTGAAGATGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000106726.10 ENSMUST00000106727.10 ENSMUST00000119394.8 ENSMUST00000120473.8 ENSMUST00000125107.8 ENSMUST00000128474.2 ENSMUST00000132417.8 ENSMUST00000135454.8 |
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