Pregenerated sensors for CYYR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041134Ensembl transcript IDs: ENSMUST00000114174.3, ENSMUST00000175700.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGGGTTCAATATTGACTTTGTCTTCATCTCGTCCTAAAGCAGCATaGTTATCAGGAGCCTGCCAATTGCAACGCTTTGATCTGACTGTG | + |
|
Preference number: 1 (lower is better) Translates to: PGSILTLSSSRPKAA*LSGACQLQRFDLTV Trigger: CACAGTCAGATCAAAGCGTTGCAATTGGCAGGCTCCTGATAACCATGCTGCTTTAGGACGAGATGAAGACAAAGTCAATATTGAACCCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 90 bp | ATCTGTTCTAGTTCTCCTAAGGCTGTATGGAATGTAGCTCTTCCCTaGTGTAGATCGGACTACGCTCTGTTCGTCTTTATTCCGGGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: ICSSSPKAVWNVALP*CRSDYALFVFIPGS Trigger: TGAACCCGGAATAAAGACGAACAGAGCGTAGTCCGATCTACATCAGGGAAGAGCTACATTCCATACAGCCTTAGGAGAACTAGAACAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 90 bp | TTTCATGCCAGGCAGGAAGTCTCTTTCTGGAACAAACAGGACCCCTaGAGGCTTCACATCTTCGAAGCTAAGATTATTCTTTCCAAAGCC | + |
|
Preference number: 1 (lower is better) Translates to: FHARQEVSFWNKQDP*RLHIFEAKIILSKA Trigger: GGCTTTGGAAAGAATAATCTTAGCTTCGAAGATGTGAAGCCTTCAGGGGTCCTGTTTGTTCCAGAAAGAGACTTCCTGCCTGGCATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 90 bp | AAGTCACTTATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTaGCCACAGCACCTTTCACCAGGAGCATGTTTCACCAGAAGAACC | + |
|
Preference number: 1 (lower is better) Translates to: KSLINTLNPLLSPHL*PQHLSPGACFTRRT Trigger: GGTTCTTCTGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTATAAGTGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 90 bp | CCGACAACATTCTCAGACCACCATGACTTTGGCATTGCGGACTCTTaGTTGAGAGTAGTGGAAACTAATCACATTGGTGGAAGAAAAATA | + |
|
Preference number: 1 (lower is better) Translates to: PTTFSDHHDFGIADS*LRVVETNHIGGRKI Trigger: TATTTTTCTTCCACCAATGTGATTAGTTTCCACTACTCTCAAGCAAGAGTCCGCAATGCCAAAGTCATGGTGGTCTGAGAATGTTGTCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 90 bp | GGGTTTCATGAAACTTCTCTTCATGAAAGAGTTTCCGGTGGCATGTaGTGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCTTGAA | + |
|
Preference number: 1 (lower is better) Translates to: GFHETSLHERVSGGM*CCLVAFNAQCFFLE Trigger: TTCAAGGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAACTCTTTCATGAAGAGAAGTTTCATGAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CCA 90 bp | TTTCTATCATTTGTGTGTTTGGAGAGAGACAGTTTTAGCTTCCTTTaGGAAAGCCGCATCTGTGTTTATGGCTTAACTAACGAGCTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: FLSFVCLERDSFSFL*ESRICVYGLTNELA Trigger: TGCCAGCTCGTTAGTTAAGCCATAAACACAGATGCGGCTTTCCCAAAGGAAGCTAAAACTGTCTCTCTCCAAACACACAAATGATAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 90 bp | AATAAATCAAAGCTCATGTACTGTGAACACTATGCTAATATTTCATaGCAGGCAGGAAGTCTCTTTCTGGAACAAACAGGACCCCTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: NKSKLMYCEHYANIS*QAGSLFLEQTGPLK Trigger: CTTCAGGGGTCCTGTTTGTTCCAGAAAGAGACTTCCTGCCTGGCATGAAATATTAGCATAGTGTTCACAGTACATGAGCTTTGATTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 90 bp | GGCTTGCTTTGTTTTGTTTTACATACTTTAGAGATGGCATGTGTTTaGTATACCCGTACCAGTAACACTTCGATGTCATCTATGAAGTTG | + |
|
Preference number: 1 (lower is better) Translates to: GLLCFVLHTLEMACV*YTRTSNTSMSSMKL Trigger: CAACTTCATAGATGACATCGAAGTGTTACTGGTACGGGTATATCAAACACATGCCATCTCTAAAGTATGTAAAACAAAACAAAGCAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCATGCAACGCTTTGATCTaGCTGTGCCTGGGTGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: CCHLIFAHSTFHQEHVSPCNALI*LCLGGS Trigger: GGATCCACCCAGGCACAGTCAGATCAAAGCGTTGCA...TGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCCAGGGCCCCTCATGTTaGGAGGCACAGAGTGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: FPVACDAVWWLLMHSVSSQGPSC*EAQSGL Trigger: GAGCCCACTCTGTGCCTCGCAACATGAGGGGCCCTG...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAGAAGCAGGGAAAGAGCCTaGTCCACGTGTACATTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LSPHLCPQHLSPGACFTRSRERA*STCTFC Trigger: GCAGAATGTACACGTGGAGCAGGCTCTTTCCCTGCT...TCTGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAGAGATGAGGTATGCCTGTaGCAGAACCAAAGTTCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: LSPHLCPQHLSPGACFTRDEVCL*QNQSSP Trigger: GGGGGAACTTTGGTTCTGGCACAGGCATACCTCATC...TCTGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | ATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTGCCCACAGCACCTTTCATTCAATACTGTTCCCTaGGTTGGGGGCGGGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: INTLNPLLSPHLCPQHLSFNTVP*VGGGEE Trigger: TTCCTCCCCGCCCCCAACTCAGGGAACAGTATTGAA...TGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCTGCATTCATTGCTGCAGACACAGCTGGACACACCTACCTAAGACAAAAGTGGGGTGAGAGTTACTaGCGATTAGGTTGGTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAAFIAADTAGHTYLRQKWGESY*RLGWWL Trigger: CAACCACCAACCTAATCGCCAGTAACTCTCACCCCA...CTTTTGTCTTAGGTAGGTGTGTCCAGCTGTGTCTGCAGCAATGAATGCAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAATAAGACATAGTAACTaGACTGCACCTTCAGCACCT | + |
|
Preference number: 2 (lower is better) Translates to: CCHLIFAHSTFHQEHVSPIRHSN*TAPSAP Trigger: AGGTGCTGAAGGTGCAGTTCAGTTACTATGTCTTAT...TGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAATCAGAGCTCTTAGATaGACAGATGAACAGTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: CCHLIFAHSTFHQEHVSPIRALR*TDEQCI Trigger: AATGCACTGTTCATCTGTTCATCTAAGAGCTCTGAT...TGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 90 bp | CAAGTCACTTATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTaGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAGAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QVTYKYSKPSAVTSS*PTAPFTRSMFHQKN Trigger: GTTCTTCTGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTATAAGTGACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTGCATTCATTGCTGCAGACACAGCTGGACACACCTACCTAAGACAAAAGCTTCGATGTCATCTATaGAGTTGCTTGTCTCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LAAFIAADTAGHTYLRQKLRCHL*SCLSLL Trigger: CAAGAGAGACAAGCAACTTCATAGATGACATCGAAG...CTTTTGTCTTAGGTAGGTGTGTCCAGCTGTGTCTGCAGCAATGAATGCAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | GGACCTCAGCCCCATGATTCTTTTCCAAATCCTCCAGAGAACTGTTCAACCCAAGTTCTGGAAAGTAACTaGCTGTCCATGTGGAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GPQPHDSFPNPPENCSTQVLESN*LSMWKN Trigger: ATTCTTCCACATGGACAGTCAGTTACTTTCCAGAAC...TTGGGTTGAACAGTTCTCTGGAGGATTTGGAAAAGAATCATGGGGCTGAGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175700.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCTCACTGTTCTATATGTaGAGAGTTCATGACACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: FPVACDAVWWLLMHSVSSSLFYM*RVHDTP Trigger: GGGGGTGTCATGAACTCTGCACATATAGAACAGTGA...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGCTAGTGGTGGGTAAATaGCACTGTTTGGTGCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQELVVGK*HCLVQG Trigger: ACCCTGCACCAAACAGTGTCATTTACCCACCACTAG...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCTGCATTCATTGCTGCAGACACAGCTGGACACACCTACCTAAGACAAAAGCTTTTGTCACCAAGATaGAGTATTTCCAGTTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LAAFIAADTAGHTYLRQKLLSPR*SISSFG Trigger: CCCAAAACTGGAAATACTTCATCTTGGTGACAAAAG...CTTTTGTCTTAGGTAGGTGTGTCCAGCTGTGTCTGCAGCAATGAATGCAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTGCCCACAGCACCTTTCATGCAAAAGGTCAAAGTaGAACAGGATGAGGTATGCC | + |
|
Preference number: 2 (lower is better) Translates to: INTLNPLLSPHLCPQHLSCKRSK*NRMRYA Trigger: GGCATACCTCATCCTGTTGCACTTTGACCTTTTGCA...TGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGCTGTCACCTCATCTTTaGCCACAGCACCTTTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQELSPHL*PQHLSP Trigger: TGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAG...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGTTGCGAGGCACAGAGTaGGCTCTAAGGCACTTGATA | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQELRGTE*ALRHLI Trigger: TATCAAGTGCCTTAGAGCCCACTCTGTGCCTCGCAA...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTGCCCACAGCACCTTTCAGTAAATGACACTGTTTaGTGCAGGGTTACCACAAAC | + |
|
Preference number: 2 (lower is better) Translates to: INTLNPLLSPHLCPQHLSVNDTV*CRVTTN Trigger: GTTTGTGGTAACCCTGCACCAAACAGTGTCATTTAC...TGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGTGGTTATCAGGAGCCTaGCAATTGCAACGCTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQEWLSGA*QLQRFD Trigger: ATCAAAGCGTTGCAATTGGCAGGCTCCTGATAACCA...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGTCAGGACCTGATCTCTaGTCCTCACAATCTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQESGPDL*SSQSFS Trigger: AGAGAAAGATTGTGAGGAGCAGAGATCAGGTCCTGA...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGAGTTTTAGCTTCCTTTaGGAAAGCCGCATCTGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQESFSFL*ESRICV Trigger: AACACAGATGCGGCTTTCCCAAAGGAAGCTAAAACT...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTACCAGTAACACTTCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGAACATTGGCTTCATGTaGAAGTTGTGGAATAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: RTSNTSMSSMKLLVSLVKNIGFM*KLWNRH Trigger: GTGTCTATTCCACAACTTTCACATGAAGCCAATGTT...CTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGAAGTGTTACTGGTACG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CCA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGCTTCTTTTCTCTGGTTaGGGAAGTTCTAGAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: EQMNSALSRSSKVLKETLLLFSG*GSSRRQ Trigger: TTGTCTTCTAGAACTTCCCCAACCAGAGAAAAGAAG...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | CGTACCAGTAACACTTCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGAGATCACTTAATCCATaGCTTCAGAAAACCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RTSNTSMSSMKLLVSLVKRSLNP*LQKTKH Trigger: ATGCTTGGTTTTCTGAAGTCATGGATTAAGTGATCT...CTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGAAGTGTTACTGGTACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGATGATTCTTGTAGCTTaGACACTTAGAGGTCATTGT | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQEMILVA*TLRGHC Trigger: ACAATGACCTCTAAGTGTTCAAGCTACAAGAATCAT...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR TCA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGAGTTCTTATAAACGATaGGGTCGCTGTTTTCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: EQMNSALSRSSKVLKETLSSYKR*GRCFLS Trigger: AGAAAGAAAACAGCGACCTCATCGTTTATAAGAACT...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 90 bp | ATCTTAGCTCCCAGAACCCTTTGGGTACCTTTGATCTTGTTTAAATaGTCAAAGATAATGGATAAGATTGATTGGCTGCATTCATTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ILAPRTLWVPLILFK*SKIMDKIDWLHSLL Trigger: CAGCAATGAATGCAGCCAATCAATCTTATCCATTATCTTTGACAATTTAAACAAGATCAAAGGTACCCAAAGGGTTCTGGGAGCTAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 90 bp | ACTATGGAGATCTTAGCTCCCAGAACCCTTTGGGTACCTTTGATCTaGTTTAAATTGTCAAAGATAATGGATAAGATTGATTGGCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TMEILAPRTLWVPLI*FKLSKIMDKIDWLH Trigger: ATGCAGCCAATCAATCTTATCCATTATCTTTGACAATTTAAACAAGATCAAAGGTACCCAAAGGGTTCTGGGAGCTAAGATCTCCATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGATGAACATTGAACATTaGCTTCATGTGAAAGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SMSSMKLLVSLVKQVSQEMNIEH*LHVKVV Trigger: CACAACTTTCACATGAAGCCAATGTTCAATGTTCAT...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 90 bp | GTAATGACTATGGAGATCTTAGCTCCCAGAACCCTTTGGGTACCTTaGATCTTGTTTAAATTGTCAAAGATAATGGATAAGATTGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: VMTMEILAPRTLWVP*ILFKLSKIMDKIDW Trigger: CCAATCAATCTTATCCATTATCTTTGACAATTTAAACAAGATCAAAGGTACCCAAAGGGTTCTGGGAGCTAAGATCTCCATAGTCATTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCAAAGCATCACACCAGAACTGTAGGAGTCCAAATTTATAATAAACTCTCTAAAACAACAATTCCTTaGAATTTACAGCCTGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: MSKHHTRTVGVQIYNKLSKTTIP*NLQPGW Trigger: CCAACCAGGCTGTAAATTGCAAGGAATTGTTGTTTT...AGAGAGTTTATTATAAATTTGGACTCCTACAGTTCTGGTGTGATGCTTTGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175700.8 |
||
| 3UTR TCA 72 bp | AGCATGGTTATCAGGAGCCTGCCAATTGCAACGCTTTaGTCTGACTGTGCCTGGGTGGATCCGCAGATCACT | + |
|
Preference number: 3 (lower is better) Translates to: SMVIRSLPIATL*SDCAWVDPQIT Trigger: AGTGATCTGCGGATCCACCCAGGCACAGTCAGATCAAAGCGTTGCAATTGGCAGGCTCCTGATAACCATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAGGGAATGTGGCTGTTTaGATGGCTGCACACACCACT | + |
|
Preference number: 3 (lower is better) Translates to: CCHLIFAHSTFHQEHVSPGNVAV*MAAHTT Trigger: AGTGGTGTGTGCAGCCATCAAAACAGCCACATTCCC...TGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGCCAGGGCCCCTCATGTaGCGAGGCACAGAGTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EQMNSALSRSSKVLKETLPGPLM*RGTEWA Trigger: AGCCCACTCTGTGCCTCGCAACATGAGGGGCCCTGG...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | GGTTATCAGGAGCCTGCCAATTGCAACGCTTTGATCTaGCTGTGCCTGGGTGGATCCGCAGATCACTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: GYQEPANCNALI*LCLGGSADHLI Trigger: GATTAAGTGATCTGCGGATCCACCCAGGCACAGTCAGATCAAAGCGTTGCAATTGGCAGGCTCCTGATAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | CTGAGCAGGGAAAGAGCCTGCTCCACGTGTACATTCTaGCTGAGATATTATCGGACCCTAGCCAGTAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSRERACSTCTF*LRYYRTLASRQ Trigger: TTGTCTACTGGCTAGGGTCCGATAATATCTCAGGCAGAATGTACACGTGGAGCAGGCTCTTTCCCTGCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCTGCATTCATTGCTGCAGACACAGCTGGACACACCTACCTAAGACAAAAGAGGAGGGTCTTTCATTaGCACCAGGCAGCCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LAAFIAADTAGHTYLRQKRRVFH*HQAAIL Trigger: TAAGATGGCTGCCTGGTGCAAATGAAAGACCCTCCT...CTTTTGTCTTAGGTAGGTGTGTCCAGCTGTGTCTGCAGCAATGAATGCAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | ATAATTCTCCACCTAGCTCTGAGCAGGGAAAGAGCCTaGTCCACGTGTACATTCTGCCTGAGATATTATCGG | + |
|
Preference number: 3 (lower is better) Translates to: IILHLALSRERA*STCTFCLRYYR Trigger: CCGATAATATCTCAGGCAGAATGTACACGTGGAGCAGGCTCTTTCCCTGCTCAGAGCTAGGTGGAGAATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | CAAAAGGTCAAAGTGCAACAGGATGAGGTATGCCTGTaGCAGAACCAAAGTTCCCCCTGGTTACTTCTATCC | + |
|
Preference number: 3 (lower is better) Translates to: QKVKVQQDEVCL*QNQSSPWLLLS Trigger: GGATAGAAGTAACCAGGGGGAACTTTGGTTCTGGCACAGGCATACCTCATCCTGTTGCACTTTGACCTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGGAGGGAGCTTTCTAGTGGAGCAGATATGGCACACATAATATTTACCAGTTCAGGAGCCTGCCAATaGCAACGCTTTGATCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: GGRELSSGADMAHIIFTSSGACQ*QRFDLT Trigger: AGTCAGATCAAAGCGTTGCAATTGGCAGGCTCCTGA...ACTGGTAAATATTATGTGTGCCATATCTGCTCCACTAGAAAGCTCCCTCCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTGCCCACAGCACCTTTCAGTTCTTTCCAGGACTTaGCCAAGCCCCCAGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: INTLNPLLSPHLCPQHLSVLSRT*PSPQKF Trigger: GAACTTCTGGGGGCTTGGCAAAGTCCTGGAAAGAAC...TGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCATCCTATTGAGGTCTTaGGGAGAACAGGCAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: FPVACDAVWWLLMHSVSSILLRS*GEQAAT Trigger: AGTTGCTGCCTGTTCTCCCAAAGACCTCAATAGGAT...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | ATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTaGCCACAGCACCTTTCACCAGGAGCATGTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: INTLNPLLSPHL*PQHLSPGACFT Trigger: GGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCTGGGCAGAGCAAACTTaGCATATGCTTAAGAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: FPVACDAVWWLLMHSVSSWAEQT*HMLKRT Trigger: AGTCCTCTTAAGCATATGCAAAGTTTGCTCTGCCCA...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCTGCATTCATTGCTGCAGACACAGCTGGACACACCTACCTAAGACAAAAGCTAACAAAGGCAGCATaGTGTATGAGGGCAAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: LAAFIAADTAGHTYLRQKLTKAA*CMRAKI Trigger: GATTTTTGCCCTCATACACAATGCTGCCTTTGTTAG...CTTTTGTCTTAGGTAGGTGTGTCCAGCTGTGTCTGCAGCAATGAATGCAGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | AGGGAATGTGGCTGTTTTGATGGCTGCACACACCACTaGAGAGTTCTTATAAACGATGAGGTCGCTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RECGCFDGCTHH*RVLINDEVAVF Trigger: GAAAACAGCGACCTCATCGTTTATAAGAACTCTTCAGTGGTGTGTGCAGCCATCAAAACAGCCACATTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | GAGTTAGGTCTTAGCTCTGAATCAAGCTTTATGACTTaGGGGAATGTGGCTGTTTTGATGGCTGCACACACC | + |
|
Preference number: 3 (lower is better) Translates to: ELGLSSESSFMT*GNVAVLMAAHT Trigger: GGTGTGTGCAGCCATCAAAACAGCCACATTCCCTCAAGTCATAAAGCTTGATTCAGAGCTAAGACCTAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | TTCTCAGACCACCATGACTTTGGCATTGCGGACTCTTaGTTGAGAGTAGTGGAAACTAATCACATTGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSDHHDFGIADS*LRVVETNHIGG Trigger: TCCACCAATGTGATTAGTTTCCACTACTCTCAAGCAAGAGTCCGCAATGCCAAAGTCATGGTGGTCTGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCTTATGTGTGATCCTATaGAGGTCTTTGGGAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: FPVACDAVWWLLMHSVSSLCVIL*RSLGEQ Trigger: CTGTTCTCCCAAAGACCTCAATAGGATCACACATAA...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | AGTTCTCCTAAGGCTGTATGGAATGTAGCTCTTCCCTaGTGTAGATCGGACTACGCTCTGTTCGTCTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SSPKAVWNVALP*CRSDYALFVFI Trigger: AATAAAGACGAACAGAGCGTAGTCCGATCTACATCAGGGAAGAGCTACATTCCATACAGCCTTAGGAGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | AGGCAGGAAGTCTCTTTCTGGAACAAACAGGACCCCTaGAGGCTTCACATCTTCGAAGCTAAGATTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RQEVSFWNKQDP*RLHIFEAKIIL Trigger: AAGAATAATCTTAGCTTCGAAGATGTGAAGCCTTCAGGGGTCCTGTTTGTTCCAGAAAGAGACTTCCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | ACGGGCTTCACAAAGTTAGCTAGTCAACAGGAAAGCTaGAACTGCTTTTCGTTGTTGGCTTGCTTTGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: TGFTKLASQQES*NCFSLLACFVL Trigger: CAAAACAAAGCAAGCCAACAACGAAAAGCAGTTGCAGCTTTCCTGTTGACTAGCTAACTTTGTGAAGCCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCATCAAGCTTTATGACTaGAGGGAATGTGGCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FPVACDAVWWLLMHSVSSIKLYD*RECGCF Trigger: AAAACAGCCACATTCCCTCAAGTCATAAAGCTTGAT...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR-3UTR CAA 90 bp | AATCTAGCCTTAATACCTTCAGGAGACCATGTTCAGTCAGACCTACACATTTCAAGCTCCCAGAACCCTTaGGGTACCTTTGATCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: NLALIPSGDHVQSDLHISSSQNP*GTFDLV Trigger: AACAAGATCAAAGGTACCCAAAGGGTTCTGGGAGCT...TGAAATGTGTAGGTCTGACTGAACATGGTCTCCTGAAGGTATTAAGGCTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | ACTACGCTCTGTTCGTCTTTATTCCGGGTTCAATATTaGCTTTGTCTTCATCTCGTCCTAAAGCAGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TTLCSSLFRVQY*LCLHLVLKQHG Trigger: ACCATGCTGCTTTAGGACGAGATGAAGACAAAGTCAATATTGAACCCGGAATAAAGACGAACAGAGCGTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | GCTCCTCACAATCTTTCTCTTATAGCATGCAAGCTATaGTTCCTCTTTGCCTCTGCCAACCTTTGTAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: APHNLSLIACKL*FLFASANLCRM Trigger: CATTCTACAAAGGTTGGCAGAGGCAAAGAGGAATCATAGCTTGCATGCTATAAGAGAAAGATTGTGAGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | ATTCATTCTACAGTTGGAGCAACCCTCATATACCAGTaGCTAACACCATGTGGGTTTTTAGGAGGGGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: IHSTVGATLIYQ*LTPCGFLGGVS Trigger: ACTAACCCCTCCTAAAAACCCACATGGTGTTAGTCACTGGTATATGAGGGTTGCTCCAACTGTAGAATGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | ACAAATGGATGTGATGTGAAGCAGCTAAACGGATGGTaGTTAGCTATACAGCATACAGATAGGTACAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: TNGCDVKQLNGW*LAIQHTDRYRV Trigger: CACCCTGTACCTATCTGTATGCTGTATAGCTAATCACCATCCGTTTAGCTGCTTCACATCACATCCATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175700.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCTAGCCTTAATACCTTCAGGAGACCATGTTCAGTCAGACCTACACATTTCACGATTAGGTTGGTGGTaGCTCATTTTGGAAGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: NLALIPSGDHVQSDLHISRLGWW*LILEDC Trigger: ACAGTCTTCCAAAATGAGCAACCACCAACCTAATCG...TGAAATGTGTAGGTCTGACTGAACATGGTCTCCTGAAGGTATTAAGGCTAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | TTTCTTTACCACACCAACACCTTTTGTATGGAATCTTaGTGGACGGGCTTCACAAAGTTAGCTAGTCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: FLYHTNTFCMES*WTGFTKLASQQ Trigger: CTGTTGACTAGCTAACTTTGTGAAGCCCGTCCATCAAGATTCCATACAAAAGGTGTTGGTGTGGTAAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | AAGCTCATGTACTGTGAACACTATGCTAATATTTCATaGCAGGCAGGAAGTCTCTTTCTGGAACAAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLMYCEHYANIS*QAGSLFLEQTG Trigger: TCCTGTTTGTTCCAGAAAGAGACTTCCTGCCTGGCATGAAATATTAGCATAGTGTTCACAGTACATGAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CCA 72 bp | ATTAATACTGACCTCTTGACTTCTTCTTGTGAGTCATaGATCTACAGATGTGGGTTCTTTCCAGGACTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: INTDLLTSSCES*IYRCGFFPGLC Trigger: GCAAAGTCCTGGAAAGAACCCACATCTGTAGATCCATGACTCACAAGAAGAAGTCAAGAGGTCAGTATTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CCA 72 bp | TTCATGAAAGAGTTTCCGGTGGCATGTGATGCTGTTTaGTGGCTTTTAATGCACAGTGTTTCTTCCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FMKEFPVACDAV*WLLMHSVSSLK Trigger: TTTCAAGGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAACTCTTTCATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | AGAATGTTTGGAATACTGTTGAGGATGACCAACATGTaGTACAAGGATAGGAAAAGTACACTCCTAGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RMFGILLRMTNM*YKDRKSTLLVV Trigger: CACCACTAGGAGTGTACTTTTCCTATCCTTGTATCACATGTTGGTCATCCTCAACAGTATTCCAAACATTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | TGTTCCTCTCATAGTGATATCATAAGACATAGTAACTaGACTGCACCTTCAGCACCTTTGTGGGTTTACCAT | + |
|
Preference number: 3 (lower is better) Translates to: CSSHSDIIRHSN*TAPSAPLWVYH Trigger: ATGGTAAACCCACAAAGGTGCTGAAGGTGCAGTTCAGTTACTATGTCTTATGATATCACTATGAGAGGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | GCGATTAGGTTGGTGGTTGCTCATTTTGGAAGACTGTaGGTTCCTTCAAATAATATGACACTGAAGTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: AIRLVVAHFGRL*VPSNNMTLKSD Trigger: ATCAGACTTCAGTGTCATATTATTTGAAGGAACTCACAGTCTTCCAAAATGAGCAACCACCAACCTAATCGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR GCA 72 bp | TCACAAAAACTAGTATTCAGGCAAAAGGCAACCCTGTaGCTTCTTGCCTTTCCCATTAATTATATAACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SQKLVFRQKATL*LLAFPINYITC Trigger: ACAAGTTATATAATTAATGGGAAAGGCAAGAAGGCACAGGGTTGCCTTTTGCCTGAATACTAGTTTTTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CCA 72 bp | GTAATGACTATGGAGATCTTAGCTCCCAGAACCCTTTaGGTACCTTTGATCTTGTTTAAATTGTCAAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: VMTMEILAPRTL*VPLILFKLSKI Trigger: TATCTTTGACAATTTAAACAAGATCAAAGGTACCCAAAGGGTTCTGGGAGCTAAGATCTCCATAGTCATTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | TGTTTTGTTTTACATACTTTAGAGATGGCATGTGTTTaGTATACCCGTACCAGTAACACTTCGATGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: CFVLHTLEMACV*YTRTSNTSMSS Trigger: AGATGACATCGAAGTGTTACTGGTACGGGTATATCAAACACATGCCATCTCTAAAGTATGTAAAACAAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CCA 72 bp | ATCAAAAATAGACCTGGTTGTTCTATTTATAGACTATaGGCAGAGCAAACTTTGCATATGCTTAAGAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: IKNRPGCSIYRL*AEQTLHMLKRT Trigger: AGTCCTCTTAAGCATATGCAAAGTTTGCTCTGCCCATAGTCTATAAATAGAACAACCAGGTCTATTTTTGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR TCA 72 bp | GATACTAATAAAAACAGTAAAATCCTTCATCTATGGTaGTTATATAGATTCATGCTATGCCTCAGGGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DTNKNSKILHLW*LYRFMLCLRVS Trigger: GCTCACCCTGAGGCATAGCATGAATCTATATAATCACCATAGATGAAGGATTTTACTGTTTTTATTAGTATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR CCA 90 bp | ATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTTGCCCACAGCACCTTTCAGGGGGTGGAGAGCGCTaGGCCGAAGCCTGTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: INTLNPLLSPHLCPQHLSGGGER*AEACGA Trigger: AGCCCCACAGGCTTCGGCCCAGCGCTCTCCACCCCC...TGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR CCA 90 bp | TTTCCGGTGGCATGTGATGCTGTTTGGTGGCTTTTAATGCACAGTGTTTCTTCCCTGGGCCGAAGCCTGTaGGGCTGCAGAGTATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPVACDAVWWLLMHSVSSLGRSL*GCRVWR Trigger: CCTCCATACTCTGCAGCCCCACAGGCTTCGGCCCAG...GGAAGAAACACTGTGCATTAAAAGCCACCAAACAGCATCACATGCCACCGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR GCA 90 bp | GGACCTCAGCCCCATGATTCTTTTCCAAATCCTCCAGAGAACTGTTCAACCCAAAGCAGCAGTAGGGCGTaGTACCGTCGCAGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPQPHDSFPNPPENCSTQSSSRA*YRRSSK Trigger: CTTACTGCTGCGACGGTAGCACGCCCTACTGCTGCT...TTGGGTTGAACAGTTCTCTGGAGGATTTGGAAAAGAATCATGGGGCTGAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175700.8 |
||
| CDS-3UTR GCA 90 bp | ACCTGCAAAGTGCAAAAGGTCAAAGTGCAACAGGATGAGGTATGCCTGTGCCAGGAGGTGGCAGGTCTGTaGGATATTCCATCTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TCKVQKVKVQQDEVCLCQEVAGL*DIPSRG Trigger: ACCACGAGATGGAATATCGCACAGACCTGCCACCTC...CTGGCACAGGCATACCTCATCCTGTTGCACTTTGACCTTTTGCACTTTGCAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR GCA 90 bp | CTGTCACCTCATCTTTGCCCACAGCACCTTTCACCAGGAGCATGTTTCACCAGATCATGCACATGCAGATaGAGATGGCGATTCCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPHLCPQHLSPGACFTRSCTCR*RWRFLQ Trigger: TTGCAGGAATCGCCATCTGCATCTGCATGTGCATGA...TCTGGTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | CAGGCAGCCATCTTATGTGTGATCCTATTGAGGTCTTaGGGAGAACAGGCAGCAACTTCCATTGCAGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QAAILCVILLRS*GEQAATSIAVP Trigger: AGGCACTGCAATGGAAGTTGCTGCCTGTTCTCCCAAAGACCTCAATAGGATCACACATAAGATGGCTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR GCA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGAGCAGCAGTAGGGCGTaGTACCGTCGCAGCAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: EQMNSALSRSSKVLKETLSSSRA*YRRSSK Trigger: CTTACTGCTGCGACGGTAGCACGCCCTACTGCTGCT...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR GCA 90 bp | ACCTGCAAAGTGCAAAAGGTCAAAGTGCAACAGGATGAGGTATGCCTGTGCCAGTGTTCTTCATGCACATaGAGATGCAGATGGCGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TCKVQKVKVQQDEVCLCQCSSCT*RCRWRF Trigger: GAATCGCCATCTGCATCTGCATGTGCATGAAGAACA...CTGGCACAGGCATACCTCATCCTGTTGCACTTTGACCTTTTGCACTTTGCAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCTTTCTAGTGGAGCAGATATGGCACACATAATATTTACCAGTCTATTACGAAGCCTGTGGGGCTaGAGAGTATGGAGGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RELSSGADMAHIIFTSLLRSLWG*RVWRWQ Trigger: CTGCCACCTCCATACTCTGCAGCCCCACAGGCTTCG...TAATAGACTGGTAAATATTATGTGTGCCATATCTGCTCCACTAGAAAGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR GCA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGGATGGCGTTGATGTGTaGTGCTCTGATGACCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EQMNSALSRSSKVLKETLDGVDV*CSDDPH Trigger: GTGGGGGTCATCAGAGCAGCACACATCAACGCCATC...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | GGTACTTCCCCCACCAAAGCCCTAACAAAGGCAGCATaGTGTATGAGGGCAAAAATCTACTTCCTCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: GTSPTKALTKAA*CMRAKIYFLQM Trigger: CATTTGGAGGAAGTAGATTTTTGCCCTCATACACAATGCTGCCTTTGTTAGGGCTTTGGTGGGGGAAGTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | CTAGAAGACAAGTCTTTCCACAGGAGGGTCTTTCATTaGCACCAGGCAGCCATCTTATGTGTGATCCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: LEDKSFHRRVFH*HQAAILCVILL Trigger: CAATAGGATCACACATAAGATGGCTGCCTGGTGCAAATGAAAGACCCTCCTGTGGAAAGACTTGTCTTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | TATAAATACTCTAAACCCTCTGCTGTCACCTCATCTTaGCCCACAGCACCTTTCACCAGGAGCATGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YKYSKPSAVTSS*PTAPFTRSMFH Trigger: GTGAAACATGCTCCTGGTGAAAGGTGCTGTGGGCAAAGATGAGGTGACAGCAGAGGGTTTAGAGTATTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | CAGTGGGGTGAGAGTTACTGGCGATTAGGTTGGTGGTaGCTCATTTTGGAAGACTGTGAGTTCCTTCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QWGESYWRLGWW*LILEDCEFLQI Trigger: TATTTGAAGGAACTCACAGTCTTCCAAAATGAGCAACCACCAACCTAATCGCCAGTAACTCTCACCCCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | TCAGACCACCATGACTTTGGCATTGCGGACTCTTGCTaGAGAGTAGTGGAAACTAATCACATTGGTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDHHDFGIADSC*RVVETNHIGGR Trigger: TCTTCCACCAATGTGATTAGTTTCCACTACTCTCAAGCAAGAGTCCGCAATGCCAAAGTCATGGTGGTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR CCA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGTGCAGAGTATGGAGGTaGCAGGTCTGTGCGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: EQMNSALSRSSKVLKETLCRVWR*QVCAIF Trigger: GAATATCGCACAGACCTGCCACCTCCATACTCTGCA...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | GAACTGTTCAACCCAAGCAAAACTTCACTTTCAACCTaGGGATATTCCAAGCACAGAATCCAGCTAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ELFNPSKTSLST*GYSKHRIQLSI Trigger: GATGCTTAGCTGGATTCTGTGCTTGGAATATCCCAAGGTTGAAAGTGAAGTTTTGCTTGGGTTGAACAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175700.8 |
||
| CDS-3UTR CCA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGGGAGGAATATTTCCTTaGATTTCCAGGATACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMSSMKLLVSLVKQVSQEGGIFP*ISRIRR Trigger: CCTCCGTATCCTGGAAATCCAAGGAAATATTCCTCC...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | CCATCAGAGCTCTTAGATGAACAGATGAACAGTGCATaGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSELLDEQMNSA*SRSSKVLKETL Trigger: CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTCATCTAAGAGCTCTGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR CCA 90 bp | GAACAGATGAACAGTGCATTGTCAAGGAGCAGTAAGGTTTTGAAAGAAACCTTGTCACGTATTCTGTTCTaGGAGGAGGAATATTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EQMNSALSRSSKVLKETLSRILF*EEEYFL Trigger: AAGGAAATATTCCTCCTCCCAGAACAGAATACGTGA...CAAGGTTTCTTTCAAAACCTTACTGCTCCTTGACAATGCACTGTTCATCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | AGGCACAGAGTGGGCTCTAAGGCACTTGATACATATTaGTGGATAAATGAAATAACGATCTGTTCTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHRVGSKALDTY*WINEITICSSS Trigger: AGAACTAGAACAGATCGTTATTTCATTTATCCACAAATATGTATCAAGTGCCTTAGAGCCCACTCTGTGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| 3UTR CAA 72 bp | ATCTTAGCTCCCAGAACCCTTTGGGTACCTTTGATCTaGTTTAAATTGTCAAAGATAATGGATAAGATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILAPRTLWVPLI*FKLSKIMDKID Trigger: ATCAATCTTATCCATTATCTTTGACAATTTAAACAAGATCAAAGGTACCCAAAGGGTTCTGGGAGCTAAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS GCA 90 bp | AGGATACGGAGGGGGTGGAGAGCGCTGGGCCGAAGCCTGTGGGGCTaGAGAGTATGGAGGTGGCAGGTCTGTGCGATATTCCATCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RIRRGWRALGRSLWG*RVWRWQVCAIFHLV Trigger: CACGAGATGGAATATCGCACAGACCTGCCACCTCCATACTCTGCAGCCCCACAGGCTTCGGCCCAGCGCTCTCCACCCCCTCCGTATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS CCA 90 bp | ATTTCCAGGATACGGAGGGGGTGGAGAGCGCTGGGCCGAAGCCTGTaGGGCTGCAGAGTATGGAGGTGGCAGGTCTGTGCGATATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ISRIRRGWRALGRSL*GCRVWRWQVCAIFH Trigger: ATGGAATATCGCACAGACCTGCCACCTCCATACTCTGCAGCCCCACAGGCTTCGGCCCAGCGCTCTCCACCCCCTCCGTATCCTGGAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS GCA 90 bp | AGCAGTAGGGCGTGCTACCGTCGCAGCAGTAAGAGTGGCACTCTTTaGCACACTGCGCCAGGCAATCCCCTGCATAAACAAAGAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSRACYRRSSKSGTL*HTAPGNPLHKQRAG Trigger: TCCTGCTCTTTGTTTATGCAGGGGATTGCCTGGCGCAGTGTGGCAAAGAGTGCCACTCTTACTGCTGCGACGGTAGCACGCCCTACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114174.3 ENSMUST00000175700.8 |
||
| CDS GCA 90 bp | AGAGAATGTTCCCAATATAGGCGTAGTAGGAGCAGCAGTAGGGCGTaGTACCGTCGCAGCAGTAAGAGTGGCACTCTTTGCCACACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RECSQYRRSRSSSRA*YRRSSKSGTLCHTA Trigger: CGCAGTGTGGCAAAGAGTGCCACTCTTACTGCTGCGACGGTAGCACGCCCTACTGCTGCTCCTACTACGCCTATATTGGGAACATTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114174.3 ENSMUST00000175700.8 |
||
| CDS GCA 90 bp | CCCCCGGTTGTTCTTCATGCACATGCAGATGCAGATGGCGATTCCTaGAATGACCCCCATGATGAACACGATTCCAAACACGATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPVVLHAHADADGDS*NDPHDEHDSKHDAS Trigger: GCTGGCATCGTGTTTGGAATCGTGTTCATCATGGGGGTCATTGCAGGAATCGCCATCTGCATCTGCATGTGCATGAAGAACAACCGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS-3UTR CAA 90 bp | TCGATGTCATCTATGAAGTTGCTTGTCTCTCTTGTAAAGCAAGTCTCACAAGAGACGCGGGTCCCCCGGTaGTTCTTCATGCACATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SMSSMKLLVSLVKQVSQETRVPR*FFMHMQ Trigger: CTGCATGTGCATGAAGAACAACCGGGGGACCCGCGT...CTCTTGTGAGACTTGCTTTACAAGAGAGACAAGCAACTTCATAGATGACATCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS CCA 72 bp | ATACGGAGGGGGTGGAGAGCGCTGGGCCGAAGCCTGTaGGGCTGCAGAGTATGGAGGTGGCAGGTCTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: IRRGWRALGRSL*GCRVWRWQVCA Trigger: CGCACAGACCTGCCACCTCCATACTCTGCAGCCCCACAGGCTTCGGCCCAGCGCTCTCCACCCCCTCCGTAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS GCA 72 bp | GGGTGGTGCCATGGGATAGGAGATGGCGTTGATGTGTaGTGCTCTGATGACCCCCACGCGGGTCCCCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GWCHGIGDGVDV*CSDDPHAGPPV Trigger: AACCGGGGGACCCGCGTGGGGGTCATCAGAGCAGCACACATCAACGCCATCTCCTATCCCATGGCACCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS GCA 72 bp | TGGTGCCATGGGATAGGAGATGGCGTTGATGTGTGCTaGTCTGATGACCCCCACGCGGGTCCCCCGGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WCHGIGDGVDVC*SDDPHAGPPVV Trigger: AACAACCGGGGGACCCGCGTGGGGGTCATCAGAGCAGCACACATCAACGCCATCTCCTATCCCATGGCACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS CAA 90 bp | GCGTTGATGTGTGCTGCTCTGATGACCCCCACGCGGGTCCCCCGGTaGTTCTTCATGCACATGCAGATGCAGATGGCGATTCCTGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: ALMCAALMTPTRVPR*FFMHMQMQMAIPAM Trigger: CATTGCAGGAATCGCCATCTGCATCTGCATGTGCATGAAGAACAACCGGGGGACCCGCGTGGGGGTCATCAGAGCAGCACACATCAACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS CAA 72 bp | TGTGCTGCTCTGATGACCCCCACGCGGGTCCCCCGGTaGTTCTTCATGCACATGCAGATGCAGATGGCGATT | + |
|
Preference number: 6 (lower is better) Translates to: CAALMTPTRVPR*FFMHMQMQMAI Trigger: AATCGCCATCTGCATCTGCATGTGCATGAAGAACAACCGGGGGACCCGCGTGGGGGTCATCAGAGCAGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||
| CDS GCA 72 bp | GCGTGCTACCGTCGCAGCAGTAAGAGTGGCACTCTTTaGCACACTGCGCCAGGCAATCCCCTGCATAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: ACYRRSSKSGTL*HTAPGNPLHKQ Trigger: TTGTTTATGCAGGGGATTGCCTGGCGCAGTGTGGCAAAGAGTGCCACTCTTACTGCTGCGACGGTAGCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114174.3 ENSMUST00000175700.8 |
||
| CDS GCA 72 bp | TCCCAATATAGGCGTAGTAGGAGCAGCAGTAGGGCGTaGTACCGTCGCAGCAGTAAGAGTGGCACTCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQYRRSRSSSRA*YRRSSKSGTLC Trigger: GCAAAGAGTGCCACTCTTACTGCTGCGACGGTAGCACGCCCTACTGCTGCTCCTACTACGCCTATATTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114174.3 ENSMUST00000175700.8 |
||
| CDS GCA 72 bp | GTTCTTCATGCACATGCAGATGCAGATGGCGATTCCTaGAATGACCCCCATGATGAACACGATTCCAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: VLHAHADADGDS*NDPHDEHDSKH Trigger: GTGTTTGGAATCGTGTTCATCATGGGGGTCATTGCAGGAATCGCCATCTGCATCTGCATGTGCATGAAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114174.3 |
||