Pregenerated sensors for CYTIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026832Ensembl transcript IDs: ENSMUST00000028175.7
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACTTCTAGCCAGGACAACACTGACAAGCCATGACCACAGGCTCTaGATCCCTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: SLLARTTLTSHDHRL*IPDLSLSLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAGGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTTGTCCTGGCTAGAAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 90 bp | ACGCCGAGGCTAACAACCATCTGTAATTCTTGTTCTATAGGACTCTaGTGCATTCTGATCTCTGCCAGCACACGGTACACACATGGATGC | + |
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Preference number: 1 (lower is better) Translates to: TPRLTTICNSCSIGL*CILISASTRYTHGC Trigger: GCATCCATGTGTGTACCGTGTGCTGGCAGAGATCAGAATGCATCAGAGTCCTATAGAACAAGAATTACAGATGGTTGTTAGCCTCGGCGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CCA 90 bp | ACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTaGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: THTHTPRKGGGRECA*NQPKSLSHGYLLEH Trigger: ATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 90 bp | AAGAACACAGGTCTACCTTTTGATGCTAATTCTTCTCAACACAAATaGACTTGGTACTGGCTCCATCCCTTCCTGGTCCCCACTTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: KNTGLPFDANSSQHK*TWYWLHPFLVPTLH Trigger: ATGCAAAGTGGGGACCAGGAAGGGATGGAGCCAGTACCAAGTTCATTTGTGTTGAGAAGAATTAGCATCAAAAGGTAGACCTGTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 90 bp | ACAGTGTGTGAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTaGAGCCTTAGACTGTTCCTCTACAAAGAGACCTCTTACCAAGAT | + |
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Preference number: 1 (lower is better) Translates to: TVCESIKYGFLLWDI*SLRLFLYKETSYQD Trigger: ATCTTGGTAAGAGGTCTCTTTGTAGAGGAACAGTCTAAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTCACACACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CCA 90 bp | GAAAGCTTGCTAATGAAAGCTAAGAAAAGAATCACCCTAAATTGTTaGTGTCCTACTCTCCAGAGACCACGAGATATTTCGCTATTGGCT | + |
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Preference number: 1 (lower is better) Translates to: ESLLMKAKKRITLNC*CPTLQRPRDISLLA Trigger: AGCCAATAGCGAAATATCTCGTGGTCTCTGGAGAGTAGGACACCAACAATTTAGGGTGATTCTTTTCTTAGCTTTCATTAGCAAGCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | CACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGAATCACCTCACTGTCACTGCTaGAGTGAGAAGATGCGTATG | + |
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Preference number: 2 (lower is better) Translates to: HTHTHTPKGWRERVCLESPHCHC*SEKMRM Trigger: CATACGCATCTTCTCACTTCAGCAGTGACAGTGAGG...TGATTCCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CCA 90 bp | GTCAATCCCTTGCAGGTTGCAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTCACACCCCGAAAGGGTaGAGGGAGAGAGTGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: VNPLQVAALQEHKQGSCPHTPKG*RERVCL Trigger: CAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTG...AGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | GTCAATCCCTTGCAGGTTGCAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTCAGGCTCTGCATCCCTaGTCTCTCTCTCTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VNPLQVAALQEHKQGSCPQALHP*SLSLSL Trigger: GAGAGAGAGAGAGAGAGATCAGGGATGCAGAGCCTG...AGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR GCA 90 bp | GTCAATCCCTTGCAGGTTGCAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTCCAAGAGCTCTCCTCTaGACCAATACTAGGCATCTC | + |
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Preference number: 2 (lower is better) Translates to: VNPLQVAALQEHKQGSCPPRALL*TNTRHL Trigger: GAGATGCCTAGTATTGGTGCAGAGGAGAGCTCTTGG...AGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGTGTGAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTGCAGCCTTAACACTGACAAGCCATaGCCACAGGCTCTGCATCCC | + |
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Preference number: 2 (lower is better) Translates to: TVCESIKYGFLLWDICSLNTDKP*PQALHP Trigger: GGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTT...AAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTCACACACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CAA 90 bp | GCTTCACAGTCTATCTGTACTTTCCCACTAAGCCAGGGGTTCATCTaGGCGGGTAGAGAGAGGATTGTGAAACAAGCCAATTCAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: ASQSICTFPLSQGFI*AGRERIVKQANSKG Trigger: ACCTTTTGAATTGGCTTGTTTCACAATCCTCTCTCTACCCGCCAAGATGAACCCCTGGCTTAGTGGGAAAGTACAGATAGACTGTGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CAA 90 bp | AAAGCACGTGACCTACTCTATCCAGCTTTTCTGTTCCTATGTCTGTaGTTACATCATTCCAGTGTCCGAGTCAGGTCAATCCCTTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: KARDLLYPAFLFLCL*LHHSSVRVRSIPCR Trigger: CCTGCAAGGGATTGACCTGACTCGGACACTGGAATGATGTAACAACAGACATAGGAACAGAAAAGCTGGATAGAGTAGGTCACGTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | ACAACACTGACAAGCCATGACCACAGGCTCTGCATCCCTGATCTCTCTCTCTCTGTAGAGAGAGGATTGTaGAACAAGCCAATTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: TTLTSHDHRLCIPDLSLSVERGL*NKPIQK Trigger: CTTTTGAATTGGCTTGTTTCACAATCCTCTCTCTAC...AGAGAGAGAGAGATCAGGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGTGTGAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTGCAGCCTTCTGTCACTGCTGAAGTaGGAAGATGCGTATGATGCT | + |
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Preference number: 2 (lower is better) Translates to: TVCESIKYGFLLWDICSLLSLLK*EDAYDA Trigger: AGCATCATACGCATCTTCTCACTTCAGCAGTGACAG...AAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTCACACACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTTCCCTATAGTCTTGCTTGTATAGAGTGGGCAGCATaGAAACAGGGCATGATCATT | + |
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Preference number: 2 (lower is better) Translates to: QHCRNINKAVVLPYSLACIEWAA*KQGMII Trigger: AATGATCATGCCCTGTTTGCATGCTGCCCACTCTAT...ACAAGCAAGACTATAGGGAAGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CAA 90 bp | AGTTTTGCTTCCTCTCCTCCAACCCCAAGAACACAGGTCTACCTTTaGATGCTAATTCTTCTCAACACAAATGAACTTGGTACTGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SFASSPPTPRTQVYL*MLILLNTNELGTGS Trigger: GGAGCCAGTACCAAGTTCATTTGTGTTGAGAAGAATTAGCATCAAAAGGTAGACCTGTGTTCTTGGGGTTGGAGGAGAGGAAGCAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CCA 90 bp | CAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTTCCCTATAGTCTTGCTTGTACATCCAAGAAGAAATaGCTTTCACTTCTAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QHCRNINKAVVLPYSLACTSKKK*LSLLAR Trigger: CCTGGCTAGAAGTGAAAGCCATTTCTTCTTGGATGT...ACAAGCAAGACTATAGGGAAGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGTGTGAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTGCAGCCTTAACTTCGAGCTGAGGTaGTACCTATGTGGAATGTTT | + |
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Preference number: 2 (lower is better) Translates to: TVCESIKYGFLLWDICSLNFELR*YLCGMF Trigger: AAACATTCCACATAGGTATCACCTCAGCTCGAAGTT...AAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTCACACACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGTGTGAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTGCAGCCTTGATCATTCCCGTGATTaGAGCAGTAAGATATGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TVCESIKYGFLLWDICSLDHSRD*SSKICS Trigger: TGAGCATATCTTACTGCTTCAATCACGGGAATGATC...AAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTCACACACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR GCA 90 bp | GTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCCAAGAAGAAATGGCTCTTAAAGGTCACTGCTaGTGTGAGATGGGATGTGAG | + |
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Preference number: 2 (lower is better) Translates to: VTIPKEAKSIGYIQEEMALKGHC*CEMGCE Trigger: CTCACATCCCATCTCACAGCAGCAGTGACCTTTAAG...AGCCATTTCTTCTTGGATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CCA 90 bp | CACTTAAATGTATCAGCTCTGTTGAAGACACACAAACACATACACACACACACAACTGCTGCTGTGAGATaGGATGTGAGCTTCACAGTC | + |
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Preference number: 2 (lower is better) Translates to: HLNVSALLKTHKHIHTHTTAAVR*DVSFTV Trigger: GACTGTGAAGCTCACATCCCATCTCACAGCAGCAGT...TGTGTGTGTGTGTATGTGTTTGTGTGTCTTCAACAGAGCTGATACATTTAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGTGTGAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTGCAGCCTTGTTTTCCCTCTGAAATaGTTAAAGTGCAAACTGATC | + |
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Preference number: 2 (lower is better) Translates to: TVCESIKYGFLLWDICSLVFPLK*LKCKLI Trigger: GATCAGTTTGCACTTTAATCATTTCAGAGGGAAAAC...AAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTCACACACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CAA 90 bp | AGTGTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTaGAGCATACAGGTAATGAACAGCTGTATCACCAGAACAGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: SVLGINLSLYHMVIY*SIQVMNSCITRTEF Trigger: AAACTCTGTTCTGGTGATACAGCTGTTCATTACCTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCATACAGAACATAGAGCATGATTaGCAGGTGAGAGTACAATAC | + |
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Preference number: 2 (lower is better) Translates to: VLGINLSLYHMVIYLSIQNIEHD*QVRVQY Trigger: GTATTGTACTCTCACCTGTCAATCATGCTCTATGTT...CTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | GAGTGGCATAGGATCCCAGCACCAAGAGCTCTCCTCTaGACCAATACTAGGCATCTCTCCCGCCTCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: EWHRIPAPRALL*TNTRHLSRLTV Trigger: GACAGTGAGGCGGGAGAGATGCCTAGTATTGGTGCAGAGGAGAGCTCTTGGTGCTGGGATCCTATGCCACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 72 bp | GCCAGGGGTTCATCTTGGCGGGTAGAGAGAGGATTGTaGAACAAGCCAATTCAAAAGGTCTGCAGCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: ARGSSWRVERGL*NKPIQKVCSSP Trigger: TGGGCTGCTGCAGACCTTTTGAATTGGCTTGTTTCACAATCCTCTCTCTACCCGCCAAGATGAACCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | CTCTTTTCTGGGACTGGAGGGATGGCTCAGTGGCTATaGCATTGCAGAGGACCAGACACAGTTCAAACCATC | + |
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Preference number: 3 (lower is better) Translates to: LFSGTGGMAQWL*HCRGPDTVQTI Trigger: GATGGTTTGAACTGTGTCTGGTCCTCTGCAATGGCATAGCCACTGAGCCATCCCTCCAGTCCCAGAAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CAA 90 bp | ACACACACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGAATTTTAATTCTCTCTaGGGCAAGCTCCCAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: THTHTHTPRKGGGRECAWNFNSL*GKLPEA Trigger: AGCCTCTGGGAGCTTGCCCAAGAGAGAATTAAAATT...CCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | GGAACTCTGCAAGTACTCTGGATAGAGTGGGCAGCATaGAAACAGGGCATGATCATTCCCGTGATTGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: GTLQVLWIEWAA*KQGMIIPVIEA Trigger: TGCTTCAATCACGGGAATGATCATGCCCTGTTTGCATGCTGCCCACTCTATCCAGAGTACTTGCAGAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CCA 72 bp | GGACTAGCAGGCCCGACAGCCAATGTCCTGGGGGAATaGATAAAGTCTAGAGATGATGTGTATGTTGACATG | + |
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Preference number: 3 (lower is better) Translates to: GLAGPTANVLGE*IKSRDDVYVDM Trigger: CATGTCAACATACACATCATCTCTAGACTTTATCCATTCCCCCAGGACATTGGCTGTCGGGCCTGCTAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CAA 90 bp | CCCATAAATTACATCCAAGTGAGCCACAGTGCCACAGGAGCTTCTTCTAAGGTCCCTTACACTCCATATTaGGGAGACAGCACTGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: PINYIQVSHSATGASSKVPYTPY*GDSTAG Trigger: ACCAGCAGTGCTGTCTCCCAAATATGGAGTGTAAGG...GACCTTAGAAGAAGCTCCTGTGGCACTGTGGCTCACTTGGATGTAATTTATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 72 bp | CTAGGCATCTCTCCCGCCTCACTGTCACTGCTGAAGTaGGAAGATGCGTATGATGCTATGTTTTATGATCCT | + |
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Preference number: 3 (lower is better) Translates to: LGISPASLSLLK*EDAYDAMFYDP Trigger: AGGATCATAAAACATAGCATCATACGCATCTTCTCACTTCAGCAGTGACAGTGAGGCGGGAGAGATGCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 72 bp | GGTCTACCTTTTGATGCTAATTCTTCTCAACACAAATaGACTTGGTACTGGCTCCATCCCTTCCTGGTCCCC | + |
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Preference number: 3 (lower is better) Translates to: GLPFDANSSQHK*TWYWLHPFLVP Trigger: GGGGACCAGGAAGGGATGGAGCCAGTACCAAGTTCATTTGTGTTGAGAAGAATTAGCATCAAAAGGTAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | TTCTTGTTCTATAGGACTCTGATGCATTCTGATCTCTaGCAGCACACGGTACACACATGGATGCAGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: FLFYRTLMHSDL*QHTVHTWMQVQ Trigger: CTGTACCTGCATCCATGTGTGTACCGTGTGCTGGCAGAGATCAGAATGCATCAGAGTCCTATAGAACAAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | TATCCTGTCTCCAGTTGTTCTAAGGTGCTTTTAGACTaGCTTACACTCCATATTTGGGAGACAGCACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: YPVSSCSKVLLD*LTLHIWETALL Trigger: CAGCAGTGCTGTCTCCCAAATATGGAGTGTAAGGCAGTCTAAAAGCACCTTAGAACAACTGGAGACAGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | GTTAAGCTATGTCACAAGCATGCTGAGTTTGCTGGATaGTGGAACATCTTCATCAAAGCACGTGACCTACTC | + |
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Preference number: 3 (lower is better) Translates to: VKLCHKHAEFAG*WNIFIKARDLL Trigger: GAGTAGGTCACGTGCTTTGATGAAGATGTTCCAGCATCCAGCAAACTCAGCATGCTTGTGACATAGCTTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CCA 72 bp | CACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTaGAATCAACCTAAGTCTTTATCACATGGTTATTTA | + |
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Preference number: 3 (lower is better) Translates to: HTPRKGGGRECA*NQPKSLSHGYL Trigger: TAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CAA 90 bp | GTCAATCCCTTGCAGGTTGCAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTCACATGGTTATTTACTaGAGCATACAGGTAATGAAC | + |
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Preference number: 3 (lower is better) Translates to: VNPLQVAALQEHKQGSCPHMVIY*SIQVMN Trigger: GTTCATTACCTGTATGCTCAAGTAAATAACCATGTG...AGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | GAAAGTATCAAGTATGGCTTTCTCCTCTGGGATATCTaGAGCCTTAGACTGTTCCTCTACAAAGAGACCTCT | + |
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Preference number: 3 (lower is better) Translates to: ESIKYGFLLWDI*SLRLFLYKETS Trigger: AGAGGTCTCTTTGTAGAGGAACAGTCTAAGGCTGCAGATATCCCAGAGGAGAAAGCCATACTTGATACTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR GCA 72 bp | ATTCTGATCTCTGCCAGCACACGGTACACACATGGATaGAGGTACAGCACTCAGACACATAAAGTATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: ILISASTRYTHG*RYSTQTHKVSK Trigger: TTTTGATACTTTATGTGTCTGAGTGCTGTACCTGCATCCATGTGTGTACCGTGTGCTGGCAGAGATCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CCA 72 bp | AAGCTATGTCACAAGCATGCTGAGTTTGCTGGATGCTaGAACATCTTCATCAAAGCACGTGACCTACTCTAT | + |
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Preference number: 3 (lower is better) Translates to: KLCHKHAEFAGC*NIFIKARDLLY Trigger: ATAGAGTAGGTCACGTGCTTTGATGAAGATGTTCCAGCATCCAGCAAACTCAGCATGCTTGTGACATAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 72 bp | CTAACAACCATCTGTAATTCTTGTTCTATAGGACTCTaGTGCATTCTGATCTCTGCCAGCACACGGTACACA | + |
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Preference number: 3 (lower is better) Translates to: LTTICNSCSIGL*CILISASTRYT Trigger: TGTGTACCGTGTGCTGGCAGAGATCAGAATGCATCAGAGTCCTATAGAACAAGAATTACAGATGGTTGTTAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CCA 72 bp | CAATATAAGAACTTAAAGGTCACTGCTGCTGTGAGATaGGATGTGAGCTTCACAGTCTATCTGTACTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: QYKNLKVTAAVR*DVSFTVYLYFP Trigger: GGGAAAGTACAGATAGACTGTGAAGCTCACATCCCATCTCACAGCAGCAGTGACCTTTAAGTTCTTATATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR-3UTR CAA 90 bp | CACTTAAATGTATCAGCTCTGTTGAAGACACACAAACACATACACACACACACACACAGATCTATAGATTaGATCCTGAGATTTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: HLNVSALLKTHKHIHTHTHRSID*ILRFLA Trigger: GGCCAGAAATCTCAGGATCAAATCTATAGATCTGTG...TGTGTGTGTGTGTATGTGTTTGTGTGTCTTCAACAGAGCTGATACATTTAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR TCA 72 bp | TATGCAAGTAGACAGCAAGCAACAGTGTTTGTAACCTaGAGGACTCAGCCTAGTAACATATTAGTTACTCTA | + |
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Preference number: 3 (lower is better) Translates to: YASRQQATVFVT*RTQPSNILVTL Trigger: TAGAGTAACTAATATGTTACTAGGCTGAGTCCTTCAGGTTACAAACACTGTTGCTTGCTGTCTACTTGCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR CCA 90 bp | ACAACACTGACAAGCCATGACCACAGGCTCTGCATCCCTGATCTCTCTCTCTCTCCGGTCCAGGAGGGCTaGACTCGGCCCCAGCAGATT | + |
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Preference number: 4 (lower is better) Translates to: TTLTSHDHRLCIPDLSLSPVQEG*TRPQQI Trigger: AATCTGCTGGGGCCGAGTCCAGCCCTCCTGGACCGG...AGAGAGAGAGAGATCAGGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| 3UTR CAA 72 bp | TTCTGGGACTGGAGGGATGGCTCAGTGGCTATGCCATaGCAGAGGACCAGACACAGTTCAAACCATCTACGC | + |
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Preference number: 4 (lower is better) Translates to: FWDWRDGSVAMP*QRTRHSSNHLR Trigger: GCGTAGATGGTTTGAACTGTGTCTGGTCCTCTGCAATGGCATAGCCACTGAGCCATCCCTCCAGTCCCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR GCA 90 bp | ACAACACTGACAAGCCATGACCACAGGCTCTGCATCCCTGATCTCTCTCTCTCTAGTCCTCAGACATACTaGTCCGGTAGCCGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TTLTSHDHRLCIPDLSLSSPQTY*SGSRPH Trigger: GTGAGGACGGCTACCGGAGCAGTATGTCTGAGGACT...AGAGAGAGAGAGATCAGGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | TCACTCACTCTGTTTAGAGATGGAGTGGGGAGTGGCATAGGATCCCAGCACCAAATCACCCAAAGAGCTTaGTCTGGCCAACGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTLFRDGVGSGIGSQHQITQRA*SGQRKL Trigger: CAGCTTGCGTTGGCCAGATCAAGCTCTTTGGGTGAT...TTGGTGCTGGGATCCTATGCCACTCCCCACTCCATCTCTAAACAGAGTGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | TCACTCACTCTGTTTAGAGATGGAGTGGGGAGTGGCATAGGATCCCAGCACCAACTCTTCCTCTTCCACTaGACGATGAAGGCCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTLFRDGVGSGIGSQHQLFLFH*TMKARD Trigger: ATCCCTGGCCTTCATCGTGCAGTGGAAGAGGAAGAG...TTGGTGCTGGGATCCTATGCCACTCCCCACTCCATCTCTAAACAGAGTGAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGAATCACATAGTGCACACTTCTaGGGAACAGATGTTCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTPKGWRERVCLESHSAHF*GTDVLV Trigger: AACCAGAACATCTGTTCCTCAGAAGTGTGCACTATG...TGATTCCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | GTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCCAAGAAGAAATGGCTTGCAGGCCAGCACAGTaGGCGGGGCTGTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTIPKEAKSIGYIQEEMACRPAQ*AGLSSC Trigger: GCAGGAAGACAGCCCCGCTCACTGTGCTGGCCTGCA...AGCCATTTCTTCTTGGATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | ACAGGCTCTGCATCCCTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCCACTGCACGATaGAGGCCAGGGATGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSASLISLSLSLSLSLSSSTAR*RPGMNF Trigger: GAAATTCATCCCTGGCCTTCATCGTGCAGTGGAAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAGGGATGCAGAGCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | GTCAATCCCTTGCAGGTTGCAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTACTCCAAATTGCCATTaGTGCCCTGCCGCTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNPLQVAALQEHKQGSCPTPNCH*CPAAAE Trigger: TTCTGCAGCGGCAGGGCAGCAATGGCAATTTGGAGT...AGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | CACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGAATCACAAATTTGGGGAGTTTaGTGTGTCTCCATGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTPKGWRERVCLESQIWGV*CVSMQQ Trigger: CTGTTGCATGGAGACACAGCAAACTCCCCAAATTTG...TGATTCCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | CATTCCAGTGTCCGAGTCAGGTCAATCCCTTGCAGGTaGCAGCACTGCAGGAACATAAACAAGGCAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSSVRVRSIPCR*QHCRNINKAVV Trigger: GACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGACCTGACTCGGACACTGGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | ACACACACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGAATGTTCCATTGTCCTaGTTTTCCACAGTAACAACC | + |
|
Preference number: 4 (lower is better) Translates to: THTHTHTPRKGGGRECAWNVPLS*FSTVTT Trigger: GGTTGTTACTGTGGAAAAGCAGGACAATGGAACATT...CCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | CCCATAAATTACATCCAAGTGAGCCACAGTGCCACAGGAGCTTCTTCTAAGGTCGCGGGGCTGTCTTCCTaGACTTTGCAGATCATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PINYIQVSHSATGASSKVAGLSS*TLQIIV Trigger: CACTATGATCTGCAAAGTGCAGGAAGACAGCCCCGC...GACCTTAGAAGAAGCTCCTGTGGCACTGTGGCTCACTTGGATGTAATTTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | CCCATAAATTACATCCAAGTGAGCCACAGTGCCACAGGAGCTTCTTCTAAGGTCGGTCCCAAACACGCTTaGGTAATTGCTCTCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PINYIQVSHSATGASSKVGPKHA*VIALPQ Trigger: TTGTGGGAGAGCAATTACTCAAGCGTGTTTGGGACC...GACCTTAGAAGAAGCTCCTGTGGCACTGTGGCTCACTTGGATGTAATTTATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | ACAACACTGACAAGCCATGACCACAGGCTCTGCATCCCTGATCTCTCTCTCTCTACACGCTTGAGTAATTaGTCTCCCACAAGGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTLTSHDHRLCIPDLSLSTRLSN*SPTREK Trigger: TTTCTCCCTTGTGGGAGAGCAATTACTCAAGCGTGT...AGAGAGAGAGAGATCAGGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | TACTGGCTCCATCCCTTCCTGGTCCCCACTTTGCATTaGACATTTACTAACAGACGTTTGCAAGAGAAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YWLHPFLVPTLH*TFTNRRLQEKP Trigger: CGGCTTCTCTTGCAAACGTCTGTTAGTAAATGTCAAATGCAAAGTGGGGACCAGGAAGGGATGGAGCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGAATCAAGTTCTGCTCTTCTGTaGATCATTGTTCCATTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTPKGWRERVCLESSSALL*IIVPLR Trigger: TCTTAATGGAACAATGATTCACAGAAGAGCAGAACT...TGATTCCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | CCCATAAATTACATCCAAGTGAGCCACAGTGCCACAGGAGCTTCTTCTAAGGTCCTGTGCTCACACCATTaGCATTTGCAAAGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PINYIQVSHSATGASSKVLCSHH*HLQRCH Trigger: GTGACATCTTTGCAAATGTCAATGGTGTGAGCACAG...GACCTTAGAAGAAGCTCCTGTGGCACTGTGGCTCACTTGGATGTAATTTATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | GTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCCAAGAAGAAATGGCTCCAAATTGCCATTGCTaGCCTGCCGCTGCAGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VTIPKEAKSIGYIQEEMAPNCHC*PAAAET Trigger: GGTTTCTGCAGCGGCAGGGCAGCAATGGCAATTTGG...AGCCATTTCTTCTTGGATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | TCTATCTGTACTTTCCCACTAAGCCAGGGGTTCATCTaGGCGGGTAGAGAGAGGATTGTGAAACAAGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SICTFPLSQGFI*AGRERIVKQAN Trigger: ATTGGCTTGTTTCACAATCCTCTCTCTACCCGCCAAGATGAACCCCTGGCTTAGTGGGAAAGTACAGATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | ACTTGGTACTGGCTCCATCCCTTCCTGGTCCCCACTTaGCATTTGACATTTACTAACAGACGTTTGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TWYWLHPFLVPT*HLTFTNRRLQE Trigger: CTCTTGCAAACGTCTGTTAGTAAATGTCAAATGCAAAGTGGGGACCAGGAAGGGATGGAGCCAGTACCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR TCA 90 bp | GTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCATACAGCCTCACTGTCCACTGTaGGGGAGCTCAGCCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGINLSLYHMVIYLSIQPHCPL*GSSANS Trigger: AGAGTTGGCTGAGCTCCCTCACAGTGGACAGTGAGG...CTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | CACTTAAATGTATCAGCTCTGTTGAAGACACACAAACACATACACACACACACATTGCTGCCCTGCCGCTaGAGAAACCTTTGCAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLNVSALLKTHKHIHTHTLLPCR*RNLCRD Trigger: GTCTCTGCAAAGGTTTCTGCAGCGGCAGGGCAGCAA...TGTGTGTGTGTGTATGTGTTTGTGTGTCTTCAACAGAGCTGATACATTTAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CCA 90 bp | CACTTAAATGTATCAGCTCTGTTGAAGACACACAAACACATACACACACACACATACAACTGCTCTCACTaGACAGTCGATGCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLNVSALLKTHKHIHTHTYNCSH*TVDAGP Trigger: TGGACCGGCATCGACTGTCCAGTGAGAGCAGTTGTA...TGTGTGTGTGTGTATGTGTTTGTGTGTCTTCAACAGAGCTGATACATTTAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | GACCTACTCTATCCAGCTTTTCTGTTCCTATGTCTGTaGTTACATCATTCCAGTGTCCGAGTCAGGTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: DLLYPAFLFLCL*LHHSSVRVRSI Trigger: GATTGACCTGACTCGGACACTGGAATGATGTAACAACAGACATAGGAACAGAAAAGCTGGATAGAGTAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | ACACCTTTGTTAAGCTATGTCACAAGCATGCTGAGTTaGCTGGATGCTGGAACATCTTCATCAAAGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: TPLLSYVTSMLS*LDAGTSSSKHV Trigger: CACGTGCTTTGATGAAGATGTTCCAGCATCCAGCAAACTCAGCATGCTTGTGACATAGCTTAACAAAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | GTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCATACAGCACAGTACTCCAAATTaGCATTGCTGCCCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGINLSLYHMVIYLSIQHSTPN*HCCPAA Trigger: AGCGGCAGGGCAGCAATGGCAATTTGGAGTACTGTG...CTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | GTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCCAAGAAGAAATGGCTAGTAGCTACAGTGTCTaGCAGCACTTGAATCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VTIPKEAKSIGYIQEEMASSYSV*QHLNPS Trigger: CGAAGGATTCAAGTGCTGGCAGACACTGTAGCTACT...AGCCATTTCTTCTTGGATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | GTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCCAAGAAGAAATGGCTCACACCATTGACATTTaGAAAGATGTCACCAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTIPKEAKSIGYIQEEMAHTIDI*KDVTNL Trigger: CAAGTTGGTGACATCTTTGCAAATGTCAATGGTGTG...AGCCATTTCTTCTTGGATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CCA 90 bp | GTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCATACAGCATGTTTTCCAAATTTaGGGAGTTTGCTGTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLGINLSLYHMVIYLSIQHVFQI*GVCCVS Trigger: GGAGACACAGCAAACTCCCCAAATTTGGAAAACATG...CTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| 3UTR CAA 72 bp | GACCAACTAGAAATTCACTTAAATGTATCAGCTCTGTaGAAGACACACAAACACATACACACACACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: DQLEIHLNVSAL*KTHKHIHTHTH Trigger: GTGTGTGTGTGTGTGTATGTGTTTGTGTGTCTTCAACAGAGCTGATACATTTAAGTGAATTTCTAGTTGGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR GCA 90 bp | CACTTAAATGTATCAGCTCTGTTGAAGACACACAAACACATACACACACACACAGTTTGCTTTAAAGTCTaGAGTTTTGCTTCAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLNVSALLKTHKHIHTHTVCFKV*SFASSS Trigger: AGAACTTGAAGCAAAACTGCAGACTTTAAAGCAAAC...TGTGTGTGTGTGTATGTGTTTGTGTGTCTTCAACAGAGCTGATACATTTAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS GCA 90 bp | AGGGAGCTCAGCCAACTCTTACAACTGCTCTCACTGGACAGTCGATaGCGGTCCAGGAGGGCTGGACTCGGCCCCAGCAGATTTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RELSQLLQLLSLDSR*RSRRAGLGPSRFPN Trigger: GTTTGGAAATCTGCTGGGGCCGAGTCCAGCCCTCCTGGACCGGCATCGACTGTCCAGTGAGAGCAGTTGTAAGAGTTGGCTGAGCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS CCA 90 bp | CTTACAACTGCTCTCACTGGACAGTCGATGCCGGTCCAGGAGGGCTaGACTCGGCCCCAGCAGATTTCCAAACAAGGACGACTCGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LTTALTGQSMPVQEG*TRPQQISKQGRLVE Trigger: CTCGACGAGTCGTCCTTGTTTGGAAATCTGCTGGGGCCGAGTCCAGCCCTCCTGGACCGGCATCGACTGTCCAGTGAGAGCAGTTGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS TCA 90 bp | TGCTTTCGTCCCCGGGGCAAAGTAGCTACAGTGTCTGCCAGCACTTaGATCCTTCGGTTGTCTTCCATCGTGAGCTGGCCCGTGAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: CFRPRGKVATVSAST*ILRLSSIVSWPVRT Trigger: CGTCCTCACGGGCCAGCTCACGATGGAAGACAACCGAAGGATTCAAGTGCTGGCAGACACTGTAGCTACTTTGCCCCGGGGACGAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS TCA 90 bp | CTCCTGGAAGAAGCATTCCGCAGAATCTCGTCTCCATCCTTAGAGTaGAAGCACTCATCGTCGGTGCTGGTCTGCCGGCTGAAGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LLEEAFRRISSPSLE*KHSSSVLVCRLKAP Trigger: GGGTGCCTTCAGCCGGCAGACCAGCACCGACGATGAGTGCTTTCACTCTAAGGATGGAGACGAGATTCTGCGGAATGCTTCTTCCAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS GCA 90 bp | CAACGCAAGCTGCTTTCGTCCCCGGGGCAAAGTAGCTACAGTGTCTaGCAGCACTTGAATCCTTCGGTTGTCTTCCATCGTGAGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QRKLLSSPGQSSYSV*QHLNPSVVFHRELA Trigger: GGCCAGCTCACGATGGAAGACAACCGAAGGATTCAAGTGCTGGCAGACACTGTAGCTACTTTGCCCCGGGGACGAAAGCAGCTTGCGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS TCA 90 bp | AGTCCTCAGACATACTGCTCCGGTAGCCGTCCTCACTGTCCACTGTaGGGGAGCTCAGCCAACTCTTACAACTGCTCTCACTGGACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPQTYCSGSRPHCPL*GSSANSYNCSHWTV Trigger: GACTGTCCAGTGAGAGCAGTTGTAAGAGTTGGCTGAGCTCCCTCACAGTGGACAGTGAGGACGGCTACCGGAGCAGTATGTCTGAGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | ACACACACACACACACACACACCCCGAAAGGGTGGAGGGAGAGAGTGTGCTTGGCCAAATTTGGGGAGTTaGCTGTGTCTCCATGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: THTHTHTPRKGGGRECAWPNLGS*LCLHAT Trigger: TGTTGCATGGAGACACAGCAAACTCCCCAAATTTGG...CCAAGCACACTCTCTCCCTCCACCCTTTCGGGGTGTGTGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS GCA 90 bp | TCGAGGTCCATGTTTTCCAAATTTGGGGAGTTTGCTGTGTCTCCATaGAACAGGCGCTGTTCCTGTAAGTGCAGAGACCTGAGCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: SRSMFSKFGEFAVSP*NRRCSCKCRDLSST Trigger: GGTGGAGCTCAGGTCTCTGCACTTACAGGAACAGCGCCTGTTGCATGGAGACACAGCAAACTCCCCAAATTTGGAAAACATGGACCTCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS TCA 90 bp | CCATTGACATTTGCAAAGATGTCACCAACTTGCAGGCCAGCACAGTaGGCGGGGCTGTCTTCCTGCACTTTGCAGATCATAGTGCACACT | + |
|
Preference number: 5 (lower is better) Translates to: PLTFAKMSPTCRPAQ*AGLSSCTLQIIVHT Trigger: AGTGTGCACTATGATCTGCAAAGTGCAGGAAGACAGCCCCGCTCACTGTGCTGGCCTGCAAGTTGGTGACATCTTTGCAAATGTCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | CAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTTCCCTATAGTCTTGCTTGTGCACAGTACTCCAAATaGCCATTGCTGCCCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QHCRNINKAVVLPYSLACAQYSK*PLLPCR Trigger: GCGGCAGGGCAGCAATGGCAATTTGGAGTACTGTGC...ACAAGCAAGACTATAGGGAAGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | CCCATAAATTACATCCAAGTGAGCCACAGTGCCACAGGAGCTTCTTCTAAGGTCAAAGATGTCACCAACTaGCAGGCCAGCACAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PINYIQVSHSATGASSKVKDVTN*QASTVS Trigger: GCTCACTGTGCTGGCCTGCAAGTTGGTGACATCTTT...GACCTTAGAAGAAGCTCCTGTGGCACTGTGGCTCACTTGGATGTAATTTATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | CCCATAAATTACATCCAAGTGAGCCACAGTGCCACAGGAGCTTCTTCTAAGGTCGGGTCCCAAACACGCTaGAGTAATTGCTCTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: PINYIQVSHSATGASSKVGSQTR*SNCSPT Trigger: TGTGGGAGAGCAATTACTCAAGCGTGTTTGGGACCC...GACCTTAGAAGAAGCTCCTGTGGCACTGTGGCTCACTTGGATGTAATTTATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS TCA 90 bp | AGCGGGGCTGTCTTCCTGCACTTTGCAGATCATAGTGCACACTTCTaGGGAACAGATGTTCTGGTTCTGGAGTCTGTAGGTCTGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGAVFLHFADHSAHF*GTDVLVLESVGLNF Trigger: GAAATTCAGACCTACAGACTCCAGAACCAGAACATCTGTTCCTCAGAAGTGTGCACTATGATCTGCAAAGTGCAGGAAGACAGCCCCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | TCACTCACTCTGTTTAGAGATGGAGTGGGGAGTGGCATAGGATCCCAGCACCAACCATGTTTTCCAAATTaGGGGAGTTTGCTGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLTLFRDGVGSGIGSQHQPCFPN*GSLLCL Trigger: GAGACACAGCAAACTCCCCAAATTTGGAAAACATGG...TTGGTGCTGGGATCCTATGCCACTCCCCACTCCATCTCTAAACAGAGTGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | GTCAATCCCTTGCAGGTTGCAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTGATCAGGTCAACCACTaGTTTGTGAGTAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VNPLQVAALQEHKQGSCPDQVNH*FVSKAF Trigger: GAAGGCTTTACTCACAAACAAGTGGTTGACCTGATC...AGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTGCAACCTGCAAGGGATTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | ACAACACTGACAAGCCATGACCACAGGCTCTGCATCCCTGATCTCTCTCTCTCTTTAAAGTCTGCAGTTTaGCTTCAAGTTCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TTLTSHDHRLCIPDLSLSLKSAV*LQVLLF Trigger: GAAGAGCAGAACTTGAAGCAAAACTGCAGACTTTAA...AGAGAGAGAGAGATCAGGGATGCAGAGCCTGTGGTCATGGCTTGTCAGTGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
||
| CDS-3UTR CAA 90 bp | AGAACCAGCAAAAGAGTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCAGTGTCTGCCAGCACTaGAATCCTTCGGTTGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RTSKRVTIPKEAKSIGYISVCQH*NPSVVF Trigger: GAAGACAACCGAAGGATTCAAGTGCTGGCAGACACT...GATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTACTCTTTTGCTGGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR CAA 90 bp | CAGCACTGCAGGAACATAAACAAGGCAGTTGTCCTTCCCTATAGTCTTGCTTGTAGTAACAACCTTCCTTaGAGACCAGGAAAAATCACC | + |
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Preference number: 5 (lower is better) Translates to: QHCRNINKAVVLPYSLACSNNLP*RPGKIT Trigger: GGTGATTTTTCCTGGTCTCAAAGGAAGGTTGTTACT...ACAAGCAAGACTATAGGGAAGGACAACTGCCTTGTTTATGTTCCTGCAGTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR CAA 90 bp | GTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCATACAGAATCACCCAAAGAGCTaGATCTGGCCAACGCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: VLGINLSLYHMVIYLSIQNHPKS*IWPTQA Trigger: AGCTTGCGTTGGCCAGATCAAGCTCTTTGGGTGATT...CTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR CAA 90 bp | GTGCTTGGAATCAACCTAAGTCTTTATCACATGGTTATTTACTTGAGCATACAGCTGTCTTCCTGCACTTaGCAGATCATAGTGCACACT | + |
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Preference number: 5 (lower is better) Translates to: VLGINLSLYHMVIYLSIQLSSCT*QIIVHT Trigger: AGTGTGCACTATGATCTGCAAAGTGCAGGAAGACAG...CTGTATGCTCAAGTAAATAACCATGTGATAAAGACTTAGGTTGATTCCAAGCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR CAA 90 bp | GTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCCAAGAAGAAATGGCTTCTGTGCTCACACCATaGACATTTGCAAAGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: VTIPKEAKSIGYIQEEMASVLTP*TFAKMS Trigger: TGACATCTTTGCAAATGTCAATGGTGTGAGCACAGA...AGCCATTTCTTCTTGGATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS-3UTR CAA 90 bp | AGAACCAGCAAAAGAGTAACGATTCCTAAAGAAGCCAAGAGTATTGGCTACATCAATCCAAATGTTCCATaGTCCTGCTTTTCCACAGTA | + |
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Preference number: 5 (lower is better) Translates to: RTSKRVTIPKEAKSIGYINPNVP*SCFSTV Trigger: TACTGTGGAAAAGCAGGACAATGGAACATTTGGATT...GATGTAGCCAATACTCTTGGCTTCTTTAGGAATCGTTACTCTTTTGCTGGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS GCA 72 bp | AGCCAACTCTTACAACTGCTCTCACTGGACAGTCGATaGCGGTCCAGGAGGGCTGGACTCGGCCCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SQLLQLLSLDSR*RSRRAGLGPSR Trigger: TCTGCTGGGGCCGAGTCCAGCCCTCCTGGACCGGCATCGACTGTCCAGTGAGAGCAGTTGTAAGAGTTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS CCA 72 bp | GCTCTCACTGGACAGTCGATGCCGGTCCAGGAGGGCTaGACTCGGCCCCAGCAGATTTCCAAACAAGGACGA | + |
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Preference number: 6 (lower is better) Translates to: ALTGQSMPVQEG*TRPQQISKQGR Trigger: TCGTCCTTGTTTGGAAATCTGCTGGGGCCGAGTCCAGCCCTCCTGGACCGGCATCGACTGTCCAGTGAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS TCA 72 bp | AGTGAAAGCACTCATCGTCGGTGCTGGTCTGCCGGCTaGAGGCACCCCGGATGGAGTCCTCAGACATACTGC | + |
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Preference number: 6 (lower is better) Translates to: SESTHRRCWSAG*RHPGWSPQTYC Trigger: GCAGTATGTCTGAGGACTCCATCCGGGGTGCCTTCAGCCGGCAGACCAGCACCGACGATGAGTGCTTTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS CAA 90 bp | CTGCTTTCGTCCCCGGGGCAAAGTAGCTACAGTGTCTGCCAGCACTaGAATCCTTCGGTTGTCTTCCATCGTGAGCTGGCCCGTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSSPGQSSYSVCQH*NPSVVFHRELARED Trigger: GTCCTCACGGGCCAGCTCACGATGGAAGACAACCGAAGGATTCAAGTGCTGGCAGACACTGTAGCTACTTTGCCCCGGGGACGAAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS CAA 72 bp | TCCCCGGGGCAAAGTAGCTACAGTGTCTGCCAGCACTaGAATCCTTCGGTTGTCTTCCATCGTGAGCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SPGQSSYSVCQH*NPSVVFHRELA Trigger: GGCCAGCTCACGATGGAAGACAACCGAAGGATTCAAGTGCTGGCAGACACTGTAGCTACTTTGCCCCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS TCA 72 bp | ACATACTGCTCCGGTAGCCGTCCTCACTGTCCACTGTaGGGGAGCTCAGCCAACTCTTACAACTGCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: TYCSGSRPHCPL*GSSANSYNCSH Trigger: GTGAGAGCAGTTGTAAGAGTTGGCTGAGCTCCCTCACAGTGGACAGTGAGGACGGCTACCGGAGCAGTATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS TCA 72 bp | GAAGCATTCCGCAGAATCTCGTCTCCATCCTTAGAGTaGAAGCACTCATCGTCGGTGCTGGTCTGCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: EAFRRISSPSLE*KHSSSVLVCRL Trigger: CAGCCGGCAGACCAGCACCGACGATGAGTGCTTTCACTCTAAGGATGGAGACGAGATTCTGCGGAATGCTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS GCA 72 bp | AGGAGCCGTAGGCAGAGTCAGCACAGTACTCCAAATTaGCATTGCTGCCCTGCCGCTGCAGAAACCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RSRRQSQHSTPN*HCCPAAAETFA Trigger: TGCAAAGGTTTCTGCAGCGGCAGGGCAGCAATGGCAATTTGGAGTACTGTGCTGACTCTGCCTACGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS GCA 72 bp | CGTAGGCAGAGTCAGCACAGTACTCCAAATTGCCATTaGTGCCCTGCCGCTGCAGAAACCTTTGCAGAGACA | + |
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Preference number: 6 (lower is better) Translates to: RRQSQHSTPNCH*CPAAAETFAET Trigger: TGTCTCTGCAAAGGTTTCTGCAGCGGCAGGGCAGCAATGGCAATTTGGAGTACTGTGCTGACTCTGCCTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS GCA 72 bp | CTGCTTTCGTCCCCGGGGCAAAGTAGCTACAGTGTCTaGCAGCACTTGAATCCTTCGGTTGTCTTCCATCGT | + |
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Preference number: 6 (lower is better) Translates to: LLSSPGQSSYSV*QHLNPSVVFHR Trigger: ACGATGGAAGACAACCGAAGGATTCAAGTGCTGGCAGACACTGTAGCTACTTTGCCCCGGGGACGAAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS GCA 72 bp | AAATCACCCAAAGAGCTTGATCTGGCCAACGCAAGCTaGTTTCGTCCCCGGGGCAAAGTAGCTACAGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: KSPKELDLANAS*FRPRGKVATVS Trigger: AGACACTGTAGCTACTTTGCCCCGGGGACGAAAGCAGCTTGCGTTGGCCAGATCAAGCTCTTTGGGTGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS TCA 72 bp | TTTGCAAAGATGTCACCAACTTGCAGGCCAGCACAGTaGGCGGGGCTGTCTTCCTGCACTTTGCAGATCATA | + |
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Preference number: 6 (lower is better) Translates to: FAKMSPTCRPAQ*AGLSSCTLQII Trigger: TATGATCTGCAAAGTGCAGGAAGACAGCCCCGCTCACTGTGCTGGCCTGCAAGTTGGTGACATCTTTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS CAA 72 bp | ACAAGGACGACTCGTCGAGGTCCATGTTTTCCAAATTaGGGGAGTTTGCTGTGTCTCCATGCAACAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: TRTTRRGPCFPN*GSLLCLHATGA Trigger: AGCGCCTGTTGCATGGAGACACAGCAAACTCCCCAAATTTGGAAAACATGGACCTCGACGAGTCGTCCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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| CDS CAA 90 bp | GATTTCCAAACAAGGACGACTCGTCGAGGTCCATGTTTTCCAAATTaGGGGAGTTTGCTGTGTCTCCATGCAACAGGCGCTGTTCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: DFQTRTTRRGPCFPN*GSLLCLHATGAVPV Trigger: TACAGGAACAGCGCCTGTTGCATGGAGACACAGCAAACTCCCCAAATTTGGAAAACATGGACCTCGACGAGTCGTCCTTGTTTGGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028175.7 |
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