Pregenerated sensors for CYTH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018001Ensembl transcript IDs: ENSMUST00000110727.2, ENSMUST00000116456.10, ENSMUST00000131436.8, ENSMUST00000177281.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGACCAATGTCCCAGAGCACAGGCTTGAGGGCTCAGGCCTTGGCTaGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LTNVPEHRLEGSGLG*LFWRARGHHIVPGP Trigger: AGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGGACATTGGTCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR TCA 90 bp | CAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTaGCCAATGTCCCAGAGCACAGGCTTGAGGGCTCAGGCCTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: QRSMPGRWQEGDTPS*PMSQSTGLRAQALA Trigger: AGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGGACATTGGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | ATGTGGGCTGTGCAGATCTGGAGGCTGTATCACCAGGTGCTGTTGTaGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: MWAVQIWRLYHQVLL*TRVPKGQCQAGGRK Trigger: CTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACAGCACCTGGTGATACAGCCTCCAGATCTGCACAGCCCACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR GCA 90 bp | CTGTATCACCAGGTGCTGTTGTGGACAAGGGTCCCCAAAGGTCAATaGCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTGACCAATGT | + |
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Preference number: 1 (lower is better) Translates to: LYHQVLLWTRVPKGQ*QAGGRKETLPADQC Trigger: ACATTGGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACAGCACCTGGTGATACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | TCTAGAACATCTAGTGTTGCCCCAAAGAGCAGGTGTGGCATGGTGTaGGTGAGGCTCTGGCTCCAGAACAGGAGTCCCATGTGGGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: SRTSSVAPKSRCGMV*VRLWLQNRSPMWAV Trigger: CACAGCCCACATGGGACTCCTGTTCTGGAGCCAGAGCCTCACCCACACCATGCCACACCTGCTCTTTGGGGCAACACTAGATGTTCTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR TCA 90 bp | TGGGCCCTCTCATCTTACCCAGTCTCAGCCCAAGCACATATGCCCTaGAGGCATGCACTGGTGTGTGTGTGTGTGTGTGTTAGGGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: WALSSYPVSAQAHMP*RHALVCVCVCVRGL Trigger: CAGACCCCTAACACACACACACACACACACCAGTGCATGCCTTCAGGGCATATGTGCTTGGGCTGAGACTGGGTAAGATGAGAGGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR TCA 90 bp | CCCCAGACGGTTCCTAGTTACTCTGCAGTACCACATCAAGTCTTCTaGAACCCAGGAATGATGCCCAGGGCCCAGCAGGACAGGGAACTG | + |
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Preference number: 1 (lower is better) Translates to: PQTVPSYSAVPHQVF*NPGMMPRAQQDREL Trigger: CAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACTTGATGTGGTACTGCAGAGTAACTAGGAACCGTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR TCA 90 bp | CTAGTTACTCTGCAGTACCACATCAAGTCTTCTGAAACCCAGGAATaGTGCCCAGGGCCCAGCAGGACAGGGAACTGTCTTTGGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LVTLQYHIKSSETQE*CPGPSRTGNCLWAE Trigger: CTCTGCCCAAAGACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACTTGATGTGGTACTGCAGAGTAACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | CAGCTCCACGTGCAGGGGAAGACCATTTTCCAAATAAGCCATGAATaGGCCCTCTCATCTTACCCAGTCTCAGCCCAAGCACATATGCCC | + |
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Preference number: 1 (lower is better) Translates to: QLHVQGKTIFQISHE*ALSSYPVSAQAHMP Trigger: GGGCATATGTGCTTGGGCTGAGACTGGGTAAGATGAGAGGGCCCATTCATGGCTTATTTGGAAAATGGTCTTCCCCTGCACGTGGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | CCTGAAGGCATGCACTGGTGTGTGTGTGTGTGTGTGTTAGGGGTCTaGATGTCACACGTGTCCCTCAGTGCCATCTTCAGTTTTTCACCT | + |
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Preference number: 1 (lower is better) Translates to: PEGMHWCVCVCVLGV*MSHVSLSAIFSFSP Trigger: AGGTGAAAAACTGAAGATGGCACTGAGGGACACGTGTGACATCCAGACCCCTAACACACACACACACACACACCAGTGCATGCCTTCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR TCA 90 bp | ACACCAGCTCCACGTGCAGGGGAAGACCATTTTCCAAATAAGCCATaGATGGGCCCTCTCATCTTACCCAGTCTCAGCCCAAGCACATAT | + |
|
Preference number: 1 (lower is better) Translates to: TPAPRAGEDHFPNKP*MGPLILPSLSPSTY Trigger: ATATGTGCTTGGGCTGAGACTGGGTAAGATGAGAGGGCCCATTCATGGCTTATTTGGAAAATGGTCTTCCCCTGCACGTGGAGCTGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | AGTGCCATCTTCAGTTTTTCACCTCCTCCAAAGGATGTCAAATGTTaGAAAACATGGCACTCCAGAGAACAGGTGGATTACTTCTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: SAIFSFSPPPKDVKC*KTWHSREQVDYFWL Trigger: CAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTTGACATCCTTTGGAGGAGGTGAAAAACTGAAGATGGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | TTCAGTTTTTCACCTCCTCCAAAGGATGTCAAATGTTGGAAAACATaGCACTCCAGAGAACAGGTGGATTACTTCTGGCTGCTTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: FSFSPPPKDVKCWKT*HSREQVDYFWLLLL Trigger: AAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTTGACATCCTTTGGAGGAGGTGAAAAACTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR GCA 90 bp | GTTGGAAAACATGGCACTCCAGAGAACAGGTGGATTACTTCTGGCTaGTTCTGCTTGCTTACTACATCAAAATATGTGTTAGCACTTAAC | + |
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Preference number: 1 (lower is better) Translates to: VGKHGTPENRWITSG*FCLLTTSKYVLALN Trigger: GTTAAGTGCTAACACATATTTTGATGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | AAATGTTGGAAAACATGGCACTCCAGAGAACAGGTGGATTACTTCTaGCTGCTTCTGCTTGCTTACTACATCAAAATATGTGTTAGCACT | + |
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Preference number: 1 (lower is better) Translates to: KCWKTWHSREQVDYF*LLLLAYYIKICVST Trigger: AGTGCTAACACATATTTTGATGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 90 bp | CAAAGGATGTCAAATGTTGGAAAACATGGCACTCCAGAGAACAGGTaGATTACTTCTGGCTGCTTCTGCTTGCTTACTACATCAAAATAT | + |
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Preference number: 1 (lower is better) Translates to: QRMSNVGKHGTPENR*ITSGCFCLLTTSKY Trigger: ATATTTTGATGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTTGACATCCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR GCA 90 bp | AGTTCTGACAGCCGTAAGGCCCTCCATTTTACTAGCTGTTTGCTTTaGAATAAAATAGCCAGAAATTCTGATATCAACATTAATAGGATA | + |
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Preference number: 1 (lower is better) Translates to: SSDSRKALHFTSCLL*NKIARNSDININRI Trigger: TATCCTATTAATGTTGATATCAGAATTTCTGGCTATTTTATTGCAAAGCAAACAGCTAGTAAAATGGAGGGCCTTACGGCTGTCAGAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR TCA 90 bp | GTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTGACCCCAGAGCACAGGCTTaGGGGCTCAGGCCTTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VPKGQCQAGGRKETLPADPRAQA*GLRPWL Trigger: CAGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGG...GTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTGTGGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGGCTCAGGCCTTGGCTaGCTGTTCTGGAGGGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: AVVDKGPQRSMPGRWQEGGSGLG*LFWRAR Trigger: ACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCC...TCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCTGAAACCCAGGAATGATGCCCAGGGCCCAGCAGGACAGGGAACTGTCGTGTGGGTGAGGCTCTaGCTCCAGAACAGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLLKPRNDAQGPAGQGTVVWVRL*LQNRSP Trigger: GGGACTCCTGTTCTGGAGCCAGAGCCTCACCCACAC...GACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTGAAGGGCAGGAGTGCCTGAGCCTTTACAAGCTCTGGGAGTGGCAGATGGGAGACACTCCCAGCTaGCCAATGTCCCAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: KGEGQECLSLYKLWEWQMGDTPS*PMSQST Trigger: TGTGCTCTGGGACATTGGTCAGCTGGGAGTGTCTCC...CATCTGCCACTCCCAGAGCTTGTAAAGGCTCAGGCACTCCTGCCCTTCACCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTCTGAAACCCAGGAATGATGCCCAGGGCCCAGCAGGACAGGGAACTGTCCAGCCCAAGCACATATaGCCTGAAGGCATGCACTGG | + |
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Preference number: 2 (lower is better) Translates to: SLLKPRNDAQGPAGQGTVQPKHI*PEGMHW Trigger: CCAGTGCATGCCTTCAGGGCATATGTGCTTGGGCTG...GACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTTAGGGGTCTGGATGTCACACGTGTCCCTCAGTGCCTGGGCTGTGCAGATCTaGAGGCTGTATCACCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVLGVWMSHVSLSAWAVQI*RLYHQV Trigger: CACCTGGTGATACAGCCTCCAGATCTGCACAGCCCA...GGCACTGAGGGACACGTGTGACATCCAGACCCCTAACACACACACACACACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCTGAAACCCAGGAATGATGCCCAGGGCCCAGCAGGACAGGGAACTGTCAGCCTTTACAAGCTCTaGGAGTGGCAGATGCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SLLKPRNDAQGPAGQGTVSLYKL*EWQMPL Trigger: CAAGGGCATCTGCCACTCCCAGAGCTTGTAAAGGCT...GACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR GCA 90 bp | ACAGCGACTTCTAGAACATCTAGTGTTGCCCCAAAGAGCAGGTGTGGCATGGTGGTCCCATGTGGGCTGTaGAGATCTGGAGGCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: TATSRTSSVAPKSRCGMVVPCGL*RSGGCI Trigger: GATACAGCCTCCAGATCTGCACAGCCCACATGGGAC...CACCATGCCACACCTGCTCTTTGGGGCAACACTAGATGTTCTAGAAGTCGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTGAAGGGCAGGAGTGCCTGAGCCTTTACAAGCTCTGGGAGTGGCAGATGAGGTCCCCTCAAAGATaGCTATGGCATCAAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: KGEGQECLSLYKLWEWQMRSPQR*LWHQRQ Trigger: TTGTCTTTGATGCCATAGTCATCTTTGAGGGGACCT...CATCTGCCACTCCCAGAGCTTGTAAAGGCTCAGGCACTCCTGCCCTTCACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGCATACACACCAGCCAGGCAGCTCAAATGCAAGGGTTTCAGATTTGAGTGCTCTGGCCCCAAGTaGATGGGGGCTGCATATATA | + |
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Preference number: 2 (lower is better) Translates to: QAAYTPARQLKCKGFRFECSGPK*MGAAYI Trigger: TATATATGCAGCCCCCATGCACTTGGGGCCAGAGCA...CTCAAATCTGAAACCCTTGCATTTGAGCTGCCTGGCTGGTGTGTATGCAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGGTCAGACAAGAGGAGGTTCTGCACATAAGTGGCCTGTTTTCCAGAGAAAGTGGCAGTCACGCCTaGATCTCCCAAGCACACTGC | + |
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Preference number: 2 (lower is better) Translates to: MKVRQEEVLHISGLFSRESGSHA*ISQAHC Trigger: GCAGTGTGCTTGGGAGATTCAGGCGTGACTGCCACT...TTCTCTGGAAAACAGGCCACTTATGTGCAGAACCTCCTCTTGTCTGACCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR CCA 90 bp | AGTCTTCTGAAACCCAGGAATGATGCCCAGGGCCCAGCAGGACAGGGAACTGTCAAATGTTGGAAAACATaGCACTCCAGAGAACAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SLLKPRNDAQGPAGQGTVKCWKT*HSREQV Trigger: CACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTT...GACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR CCA 90 bp | ATGAAGGTCAGACAAGAGGAGGTTCTGCACATAAGTGGCCTGTTTTCCAGAGAAGCATGTGAGGGGAAGTaGCAGTCACGCCTGAATCTC | + |
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Preference number: 2 (lower is better) Translates to: MKVRQEEVLHISGLFSREACEGK*QSRLNL Trigger: GAGATTCAGGCGTGACTGCCACTTCCCCTCACATGC...TTCTCTGGAAAACAGGCCACTTATGTGCAGAACCTCCTCTTGTCTGACCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CAA 90 bp | CAGTGCCATCTTCAGTTTTTCACCTCCTCCAAAGGATGTCAAATGTaGGAAAACATGGCACTCCAGAGAACAGGTGGATTACTTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QCHLQFFTSSKGCQM*ENMALQRTGGLLLA Trigger: AGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTTGACATCCTTTGGAGGAGGTGAAAAACTGAAGATGGCACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTGCATACACACCAGCCAGGCAGCTCAAATGCAAGGGTTTCAGATTTGAGATAGACTGTTTTCAGTaGACAGTATATACGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: QAAYTPARQLKCKGFRFEIDCFQ*TVYTCV Trigger: GACACACGTATATACTGTGCACTGAAAACAGTCTAT...CTCAAATCTGAAACCCTTGCATTTGAGCTGCCTGGCTGGTGTGTATGCAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CAA 90 bp | AAGGGTTTCAGATTTGAGGTATCAGTAAAAGCAAAGCCTAGAAGCTaGGGAATAAACCAAAAAGTGATCAGTCTGGTGCACGAGCGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KGFRFEVSVKAKPRS*GINQKVISLVHERG Trigger: CCCTCGCTCGTGCACCAGACTGATCACTTTTTGGTTTATTCCCAAGCTTCTAGGCTTTGCTTTTACTGATACCTCAAATCTGAAACCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CAA 90 bp | CATGGCACTCCAGAGAACAGGTGGATTACTTCTGGCTGCTTCTGCTaGCTTACTACATCAAAATATGTGTTAGCACTTAACCCAAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: HGTPENRWITSGCFC*LTTSKYVLALNPSL Trigger: CAAACTTGGGTTAAGTGCTAACACATATTTTGATGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CAA 90 bp | TGCAATAGTTCTGACAGCCGTAAGGCCCTCCATTTTACTAGCTGTTaGCTTTGCAATAAAATAGCCAGAAATTCTGATATCAACATTAAT | + |
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Preference number: 2 (lower is better) Translates to: CNSSDSRKALHFTSC*LCNKIARNSDININ Trigger: ATTAATGTTGATATCAGAATTTCTGGCTATTTTATTGCAAAGCAAACAGCTAGTAAAATGGAGGGCCTTACGGCTGTCAGAACTATTGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR CCA 72 bp | GGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTaGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GLRPWLAVLEGP*APHRPRSCRWG Trigger: TCCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR CCA 72 bp | GTCCCAGAGCACAGGCTTGAGGGCTCAGGCCTTGGCTaGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTC | + |
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Preference number: 3 (lower is better) Translates to: VPEHRLEGSGLG*LFWRARGHHIV Trigger: GACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR TCA 72 bp | ATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTaGCCAATGTCCCAGAGCACAGGCTTGAGGGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: MPGRWQEGDTPS*PMSQSTGLRAQ Trigger: CTGAGCCCTCAAGCCTGTGCTCTGGGACATTGGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR-3UTR CAA 90 bp | AGTCTTCTGAAACCCAGGAATGATGCCCAGGGCCCAGCAGGACAGGGAACTGTCCCACAGAGAGCTCTGTaGCCCAGGGCCACACCTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLLKPRNDAQGPAGQGTVPQRAL*PRATPG Trigger: CCCAGGTGTGGCCCTGGGCAACAGAGCTCTCTGTGG...GACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR GCA 72 bp | CAGGTGCTGTTGTGGACAAGGGTCCCCAAAGGTCAATaGCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: QVLLWTRVPKGQ*QAGGRKETLPA Trigger: AGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACAGCACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR TCA 72 bp | CCAATGCCTCTTCACCCAGCTGACACTCTGTCAGGATaGCTGTGCCCCAGCTGCTCTGGCCCCAAGTGCATG | + |
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Preference number: 3 (lower is better) Translates to: PMPLHPADTLSG*LCPSCSGPKCM Trigger: CATGCACTTGGGGCCAGAGCAGCTGGGGCACAGTCATCCTGACAGAGTGTCAGCTGGGTGAAGAGGCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR TCA 72 bp | GCTCTCCACACTCACCCCAATGCCTCTTCACCCAGCTaGCACTCTGTCAGGATGACTGTGCCCCAGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ALHTHPNASSPS*HSVRMTVPQLL Trigger: GAGCAGCTGGGGCACAGTCATCCTGACAGAGTGTCAGCTGGGTGAAGAGGCATTGGGGTGAGTGTGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR GCA 72 bp | CACGAGCGAGGGAGCTCTGGCCTGCACATCCTTCTGTaGCATCTTAGATGGCAGCTACCACCAAGGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: HERGSSGLHILL*HLRWQLPPRSG Trigger: GCCTGACCTTGGTGGTAGCTGCCATCTAAGATGGCACAGAAGGATGTGCAGGCCAGAGCTCCCTCGCTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR TCA 72 bp | GACGAGTGCAGACAAAGGGTGAAGGGCAGGAGTGCCTaGGCCTTTACAAGCTCTGGGAGTGGCAGATGCCCT | + |
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Preference number: 3 (lower is better) Translates to: DECRQRVKGRSA*AFTSSGSGRCP Trigger: AGGGCATCTGCCACTCCCAGAGCTTGTAAAGGCTCAGGCACTCCTGCCCTTCACCCTTTGTCTGCACTCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| 3UTR GCA 72 bp | GGCTCTGGCTCCAGAACAGGAGTCCCATGTGGGCTGTaGAGATCTGGAGGCTGTATCACCAGGTGCTGTTGT | + |
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Preference number: 3 (lower is better) Translates to: GSGSRTGVPCGL*RSGGCITRCCC Trigger: ACAACAGCACCTGGTGATACAGCCTCCAGATCTGCACAGCCCACATGGGACTCCTGTTCTGGAGCCAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR CCA 72 bp | GTGCAGATCTGGAGGCTGTATCACCAGGTGCTGTTGTaGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGT | + |
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Preference number: 3 (lower is better) Translates to: VQIWRLYHQVLL*TRVPKGQCQAG Trigger: ACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACAGCACCTGGTGATACAGCCTCCAGATCTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| 3UTR CCA 72 bp | TCTAGTGTTGCCCCAAAGAGCAGGTGTGGCATGGTGTaGGTGAGGCTCTGGCTCCAGAACAGGAGTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: SSVAPKSRCGMV*VRLWLQNRSPM Trigger: CATGGGACTCCTGTTCTGGAGCCAGAGCCTCACCCACACCATGCCACACCTGCTCTTTGGGGCAACACTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| 3UTR GCA 72 bp | ATCTCCCAAGCACACTGCTCTCCACACTCACCCCAATaGCTCTTCACCCAGCTGACACTCTGTCAGGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: ISQAHCSPHSPQ*LFTQLTLCQDD Trigger: GTCATCCTGACAGAGTGTCAGCTGGGTGAAGAGGCATTGGGGTGAGTGTGGAGAGCAGTGTGCTTGGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CCA 72 bp | GGTGAAGGGCAGGAGTGCCTGAGCCTTTACAAGCTCTaGGAGTGGCAGATGCCCTTGGGTTTAACACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GEGQECLSLYKL*EWQMPLGLTLS Trigger: TGACAGTGTTAAACCCAAGGGCATCTGCCACTCCCAGAGCTTGTAAAGGCTCAGGCACTCCTGCCCTTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR TCA 72 bp | CTGCAGTACCACATCAAGTCTTCTGAAACCCAGGAATaGTGCCCAGGGCCCAGCAGGACAGGGAACTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LQYHIKSSETQE*CPGPSRTGNCL Trigger: AAGACAGTTCCCTGTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACTTGATGTGGTACTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR TCA 72 bp | GTTCCTAGTTACTCTGCAGTACCACATCAAGTCTTCTaGAACCCAGGAATGATGCCCAGGGCCCAGCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VPSYSAVPHQVF*NPGMMPRAQQD Trigger: GTCCTGCTGGGCCCTGGGCATCATTCCTGGGTTTCAGAAGACTTGATGTGGTACTGCAGAGTAACTAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CCA 72 bp | ATGCACTGGTGTGTGTGTGTGTGTGTGTTAGGGGTCTaGATGTCACACGTGTCCCTCAGTGCCATCTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: MHWCVCVCVLGV*MSHVSLSAIFS Trigger: ACTGAAGATGGCACTGAGGGACACGTGTGACATCCAGACCCCTAACACACACACACACACACACCAGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR TCA 72 bp | TTCCAGAGAAGGAACTCCATCTCCAGGCCTTGGCACTaGCAGGATAAATACCCCGGCCATAGCTGTACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: FQRRNSISRPWH*QDKYPGHSCTL Trigger: TAAGGTACAGCTATGGCCGGGGTATTTATCCTGTCAGTGCCAAGGCCTGGAGATGGAGTTCCTTCTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR TCA 72 bp | TCATCTTACCCAGTCTCAGCCCAAGCACATATGCCCTaGAGGCATGCACTGGTGTGTGTGTGTGTGTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSYPVSAQAHMP*RHALVCVCVCV Trigger: AACACACACACACACACACACCAGTGCATGCCTTCAGGGCATATGTGCTTGGGCTGAGACTGGGTAAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR GCA 72 bp | TGTGTTAGGGGTCTGGATGTCACACGTGTCCCTCAGTaGCATCTTCAGTTTTTCACCTCCTCCAAAGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: CVRGLDVTRVPQ*HLQFFTSSKGC Trigger: ACATCCTTTGGAGGAGGTGAAAAACTGAAGATGGCACTGAGGGACACGTGTGACATCCAGACCCCTAACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CCA 72 bp | TTACTGATTCATCTTAGAGAAGCATGTGAGGGGAAGTaGCAGTCACGCCTGAATCTCCCAAGCACACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLIHLREACEGK*QSRLNLPSTLL Trigger: GAGCAGTGTGCTTGGGAGATTCAGGCGTGACTGCCACTTCCCCTCACATGCTTCTCTAAGATGAATCAGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR GCA 72 bp | AGCCAGGCTGCATACACACCAGCCAGGCAGCTCAAATaGAAGGGTTTCAGATTTGAGGTATCAGTAAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SQAAYTPARQLK*KGFRFEVSVKA Trigger: TGCTTTTACTGATACCTCAAATCTGAAACCCTTGCATTTGAGCTGCCTGGCTGGTGTGTATGCAGCCTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CCA 72 bp | TATGAAGGTCAGACAAGAGGAGGTTCTGCACATAAGTaGCCTGTTTTCCAGAGAAGGAACTCCATCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YEGQTRGGSAHK*PVFQRRNSISR Trigger: CCTGGAGATGGAGTTCCTTCTCTGGAAAACAGGCCACTTATGTGCAGAACCTCCTCTTGTCTGACCTTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CCA 72 bp | TCACCTCCTCCAAAGGATGTCAAATGTTGGAAAACATaGCACTCCAGAGAACAGGTGGATTACTTCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SPPPKDVKCWKT*HSREQVDYFWL Trigger: CAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTTGACATCCTTTGGAGGAGGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CCA 72 bp | TCAAATGTTGGAAAACATGGCACTCCAGAGAACAGGTaGATTACTTCTGGCTGCTTCTGCTTGCTTACTACA | + |
|
Preference number: 3 (lower is better) Translates to: SNVGKHGTPENR*ITSGCFCLLTT Trigger: TGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATGTTTTCCAACATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR GCA 72 bp | CATGGCACTCCAGAGAACAGGTGGATTACTTCTGGCTaGTTCTGCTTGCTTACTACATCAAAATATGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HGTPENRWITSG*FCLLTTSKYVL Trigger: TAACACATATTTTGATGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR GCA 72 bp | AAGTGCATGGGGGCTGCATATATAGACTGTTTTCAGTaGACAGTATATACGTGTGTCCAGGAGTTAAGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: KCMGAAYIDCFQ*TVYTCVQELSL Trigger: TAAACTTAACTCCTGGACACACGTATATACTGTGCACTGAAAACAGTCTATATATGCAGCCCCCATGCACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR GCA 72 bp | ACTCCAGAGAACAGGTGGATTACTTCTGGCTGCTTCTaGTTGCTTACTACATCAAAATATGTGTTAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: TPENRWITSGCF*LLTTSKYVLAL Trigger: AAGTGCTAACACATATTTTGATGTAGTAAGCAAGCAGAAGCAGCCAGAAGTAATCCACCTGTTCTCTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | GGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGCAGGCAGTATCGGGATaGAAAGGCCTCCATCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCSGGPVGTTSSPVLPLGQAVSG*KGLHHA Trigger: CGCATGATGGAGGCCTTTGCATCCCGATACTGCCTG...CCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTCCAGGTAGTCTCCGATaGCGGTCTTGTTCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLGWLFWRARGHHIVPGPPGSLR*RSCSGP Trigger: AGGGCCTGAACAAGACCGTCATCGGAGACTACCTGG...AGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | GGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGCGTAGCATGTATCTGTaGACTGGAAGACCCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GCSGGPVGTTSSPVLPLGRSMYL*TGRPQG Trigger: ACCCTGGGGTCTTCCAGTCCACAGATACATGCTACG...CCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| 3UTR CAA 72 bp | CCAATGTCCCAGAGCACAGGCTTGAGGGCTCAGGCCTaGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PMSQSTGLRAQA*AGCSGGPVGTT Trigger: TGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGGACATTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCAGGCAGTATCGGGATaGAAAGGCCTCCATCATGCG | + |
|
Preference number: 4 (lower is better) Translates to: SGLGWLFWRARGHHIVPGQAVSG*KGLHHA Trigger: CGCATGATGGAGGCCTTTGCATCCCGATACTGCCTG...ACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTAGGCCTGGACAAGGTTaGGATCAGCAAACTCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGWLFWRARGHHIVPGPRPGQG*DQQTHA Trigger: TGCATGAGTTTGCTGATCTCAACCTTGTCCAGGCCT...AGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | GTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGATCCTGCCTCTCCAGGAAGTCTaGAGCTCCATAGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPGPAAGEASVSAGVWILPLQEV*SSIGTA Trigger: GGCAGTTCCTATGGAGCTTCAGACTTCCTGGAGAGG...CAGGATCCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | AGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCTTCTCGGTCTGGGTTaGAGAACGTGTGTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RAQALAGCSGGPVGTTSSLLGLG*RTCVSG Trigger: ACCTGACACACACGTTCTTCAACCCAGACCGAGAAG...GGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | GGCTTGAGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCCTCTGGGGAGCTCTaGAGCAGGTCGTTCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: GLRAQALAGCSGGPVGTTSSGEL*SRSFSI Trigger: AATTGAGAACGACCTGCTGCAGAGCTCCCCAGAGGA...TGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | GGCTTGAGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACACGTAGCATGTATCTGTaGACTGGAAGACCCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLRAQALAGCSGGPVGTTRSMYL*TGRPQG Trigger: ACCCTGGGGTCTTCCAGTCCACAGATACATGCTACG...TGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTGACCGGAAGACCCCAGGGTTaGACAGGCAGTATCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPKVNARPVAGRRHSQLTGRPQG*TGSIGM Trigger: CATCCCGATACTGCCTGTGCAACCCTGGGGTCTTCC...GGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCTCCTCCTTTTCCTCGTaGCCAACATGTCATAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: QALAGCSGGPVGTTSSPVSSFSS*PTCHRT Trigger: CGTTCTATGACATGTTGGCCACGAGGAAAAGGAGGA...GACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | ACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGACTTCTCGGTCTGGGTTaGAGAACGTGTGTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSPVLPLGRPVYLLESGLLGLG*RTCVSG Trigger: ACCTGACACACACGTTCTTCAACCCAGACCGAGAAG...TCCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | GGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCCCTACTGATGCTTaGTTTGATGGACTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GHHIVPGPAAGEASVSAGVPTDA*FDGLHP Trigger: TGGATGAAGTCCATCAAAGCAAGCATCAGTAGGGAC...TCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGTGGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTCCAGCCTTCTCGGTCTaGGTTGAAGAACGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPKGQCQAGGRKETLPAPAFSV*VEERVC Trigger: ACACACACGTTCTTCAACCCAGACCGAGAAGGCTGG...AGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | ACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGATGGGCTCCTTGTCCGTaGTGTACTCAAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSPVLPLGRPVYLLESGWAPCP*CTQSSR Trigger: TCTACTACTTTGAGTACACCACGGACAAGGAGCCCA...TCCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | TGTTGTGGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGATCCTCTGGGGAGCTCTaGAGCAGGTCGTTCTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: CCGQGSPKVNARPVAGRRSSGEL*SRSFSI Trigger: AATTGAGAACGACCTGCTGCAGAGCTCCCCAGAGGA...TCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTAACTGCCTTAAGGCCTaGACAAGGTTGAGATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVPKGQCQAGGRKETLPANCLKA*TRLRSA Trigger: TGCTGATCTCAACCTTGTCCAGGCCTTAAGGCAGTT...AGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | GCTGTTGTGGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAAACTGCCTTAAGGCCTaGACAAGGTTGAGATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVVDKGPQRSMPGRWQEGNCLKA*TRLRSA Trigger: TGCTGATCTCAACCTTGTCCAGGCCTTAAGGCAGTT...TCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | TGTTGTGGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGATTTGCTCTCCTCCACTaGAGTCAGGTTGTCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: CCGQGSPKVNARPVAGRRFALLH*SQVVNL Trigger: GAGATTGACAACCTGACTTCAGTGGAGGAGAGCAAA...TCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | TGTTGTGGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGATGGGCTCCTTGTCCGTaGTGTACTCAAAGTAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CCGQGSPKVNARPVAGRRWAPCP*CTQSSR Trigger: TCTACTACTTTGAGTACACCACGGACAAGGAGCCCA...TCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| 3UTR CAA 72 bp | GACAGCTCACTGAAAGTCTCGTGTAAGGGCATTTGGTaGGCGGTTTTCAAGGGCTCTCAGAACACCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DSSLKVSCKGIW*AVFKGSQNTSS Trigger: GGAGCTGGTGTTCTGAGAGCCCTTGAAAACCGCCAACCAAATGCCCTTACACGAGACTTTCAGTGAGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | AAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTGACCAATGTCCAATTAGGAACTGAATaGCCTTTTTGGGGTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KVNARPVAGRRHSQLTNVQLGTE*PFWGPC Trigger: ACATGGACCCCAAAAAGGGCATTCAGTTCCTAATTG...GACATTGGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCTGCATACACACCAGCCAGGCAGCTCAAATGCAAGGGTTTCAGATTTGAGTTTGCTCTCCTCCACTaGAGTCAGGTTGTCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAAYTPARQLKCKGFRFEFALLH*SQVVNL Trigger: GAGATTGACAACCTGACTTCAGTGGAGGAGAGCAAA...CTCAAATCTGAAACCCTTGCATTTGAGCTGCCTGGCTGGTGTGTATGCAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | AAGGTCCCCTCAAAGATGACTATGGCATCAAAGACAACATTAGGTAGCCTCATGCCAGGTAGTCTCCGATaGCGGTCTTGTTCAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVPSKMTMASKTTLGSLMPGSLR*RSCSGP Trigger: AGGGCCTGAACAAGACCGTCATCGGAGACTACCTGG...CATGAGGCTACCTAATGTTGTCTTTGATGCCATAGTCATCTTTGAGGGGACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | ACAACATGGTTTCTGGTCTGTAACGACCTAACTTGTCAGCAAAGCACACCTGTAGGAAGACCCCAGGGTTaGACAGGCAGTATCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTWFLVCNDLTCQQSTPVGRPQG*TGSIGM Trigger: CATCCCGATACTGCCTGTGCAACCCTGGGGTCTTCC...TACAGGTGTGCTTTGCTGACAAGTTAGGTCGTTACAGACCAGAAACCATGTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| CDS-3UTR TCA 90 bp | AAGGTCCCCTCAAAGATGACTATGGCATCAAAGACAACATTAGGTAGCCTCATGCCTCTCCAGGAAGTCTaGAGCTCCATAGGAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVPSKMTMASKTTLGSLMPLQEV*SSIGTA Trigger: GGCAGTTCCTATGGAGCTTCAGACTTCCTGGAGAGG...CATGAGGCTACCTAATGTTGTCTTTGATGCCATAGTCATCTTTGAGGGGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| CDS-3UTR CCA 90 bp | AAAACAGCGACTTCTAGAACATCTAGTGTTGCCCCAAAGAGCAGGTGTGGCATGTCCTCCTTTTCCTCGTaGCCAACATGTCATAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: KTATSRTSSVAPKSRCGMSSFSS*PTCHRT Trigger: CGTTCTATGACATGTTGGCCACGAGGAAAAGGAGGA...CATGCCACACCTGCTCTTTGGGGCAACACTAGATGTTCTAGAAGTCGCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| CDS-3UTR GCA 90 bp | AAAACAGCGACTTCTAGAACATCTAGTGTTGCCCCAAAGAGCAGGTGTGGCATGGTCCCTACTGATGCTTaGTTTGATGGACTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTATSRTSSVAPKSRCGMVPTDA*FDGLHP Trigger: TGGATGAAGTCCATCAAAGCAAGCATCAGTAGGGAC...CATGCCACACCTGCTCTTTGGGGCAACACTAGATGTTCTAGAAGTCGCTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
||
| 3UTR CAA 72 bp | AGATTTGAGGTATCAGTAAAAGCAAAGCCTAGAAGCTaGGGAATAAACCAAAAAGTGATCAGTCTGGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RFEVSVKAKPRS*GINQKVISLVH Trigger: GTGCACCAGACTGATCACTTTTTGGTTTATTCCCAAGCTTCTAGGCTTTGCTTTTACTGATACCTCAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
||
| 3UTR CAA 72 bp | TCTGACAGCCGTAAGGCCCTCCATTTTACTAGCTGTTaGCTTTGCAATAAAATAGCCAGAAATTCTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: SDSRKALHFTSC*LCNKIARNSDI Trigger: GATATCAGAATTTCTGGCTATTTTATTGCAAAGCAAACAGCTAGTAAAATGGAGGGCCTTACGGCTGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCATCGCGCACGTTGTGGTaGTGCAAGCTGGTGTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: SGGPVGTTSSPVLPLGRPSRTLW*CKLVLS Trigger: GCTCAACACCAGCTTGCACAACCACAACGTGCGCGA...TGGCCTCCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | GCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTGCGGTACACAACGTGGTaGCCCTCCACCACACGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ALAGCSGGPVGTTSSPVLRYTTW*PSTTRP Trigger: TGGCCGTGTGGTGGAGGGCAACCACGTTGTGTACCG...CAGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | CACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGCGCTCAGCGGTGGGCTaGTCGCGCACGTTGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: HIVPGPAAGEASVSAGVWRSAVG*SRTLWL Trigger: CAACCACAACGTGCGCGACAAGCCCACCGCTGAGCG...CCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | GGCTTGAGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACAAGGTCCCCACCCTCGTaGATGCCTCGGTTCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: GLRAQALAGCSGGPVGTTRSPPS*MPRFMV Trigger: CACCATGAACCGAGGCATCAACGAGGGTGGGGACCT...TGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | CAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCTCTCCGATGACGGTCTaGTTCAGGCCCTCTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QALAGCSGGPVGTTSSPVSPMTV*FRPSPL Trigger: CAAAGGAGAGGGCCTGAACAAGACCGTCATCGGAGA...GACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TGGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGTCGCGCACGTTGTGGTaGTGCAAGCTGGTGTTGAGC | + |
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Preference number: 5 (lower is better) Translates to: WAPHRPRSCRWGGQCICWSRTLW*CKLVLS Trigger: GCTCAACACCAGCTTGCACAACCACAACGTGCGCGA...CCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | AGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTCGCTCAGCGGTGGGCTaGTCGCGCACGTTGTGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RVPKGQCQAGGRKETLPARSAVG*SRTLWL Trigger: CAACCACAACGTGCGCGACAAGCCCACCGCTGAGCG...AGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCACCTTCCCATGGCTATTaGCTTGTTCCTCTGAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: SGGPVGTTSSPVLPLGRPPSHGY*LVPLSS Trigger: ACTACTCAGAGGAACAAGCAAATAGCCATGGGAAGG...TGGCCTCCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | CTTGAGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCCCTTCTCGGTCTGGGTaGAAGAACGTGTGTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LEGSGLGWLFWRARGHHIPSRSG*KNVCVR Trigger: CCTGACACACACGTTCTTCAACCCAGACCGAGAAGG...GATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | CACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGCCTTCTCGGTCTGGGTaGAAGAACGTGTGTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HIVPGPAAGEASVSAGVWPSRSG*KNVCVR Trigger: CCTGACACACACGTTCTTCAACCCAGACCGAGAAGG...CCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | AATGTCCCAGAGCACAGGCTTGAGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGCGGTACACAACGTGGTaGCCCTCCACCACACGGCCA | + |
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Preference number: 5 (lower is better) Translates to: NVPEHRLEGSGLGWLFWRRYTTW*PSTTRP Trigger: TGGCCGTGTGGTGGAGGGCAACCACGTTGTGTACCG...CCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGGACATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | CACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGTTCAGGCCCTCTCCTTaGTACAGAAACTGGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: HIVPGPAAGEASVSAGVWFRPSP*YRNWAT Trigger: TGTCGCCCAGTTTCTGTACAAAGGAGAGGGCCTGAA...CCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | GTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGAGTCTGGATCCTGTTCAGGCCCTCTCCTTaGTACAGAAACTGGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: VPGPAAGEASVSAGVWILFRPSP*YRNWAT Trigger: TGTCGCCCAGTTTCTGTACAAAGGAGAGGGCCTGAA...CAGGATCCAGACTCCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TCAGGCCTTGGCTGGCTGTTCTGGAGGGCCCGTGGGCACCACATCGTCCCCGGTAAGGCCTGGACAAGGTaGAGATCAGCAAACTCATGC | + |
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Preference number: 5 (lower is better) Translates to: SGLGWLFWRARGHHIVPGKAWTR*RSANSC Trigger: GCATGAGTTTGCTGATCTCAACCTTGTCCAGGCCTT...ACCGGGGACGATGTGGTGCCCACGGGCCCTCCAGAACAGCCAGCCAAGGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | AATGTCCCAGAGCACAGGCTTGAGGGCTCAGGCCTTGGCTGGCTGTTCTGGAGGAGGTCCCCACCCTCGTaGATGCCTCGGTTCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: NVPEHRLEGSGLGWLFWRRSPPS*MPRFMV Trigger: CACCATGAACCGAGGCATCAACGAGGGTGGGGACCT...CCTCCAGAACAGCCAGCCAAGGCCTGAGCCCTCAAGCCTGTGCTCTGGGACATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TGGGCACCACATCGTCCCCGGTCCTGCCGCTGGGGAGGCCAGTGTATCTGCTGGCCTTCCCATGGCTATTaGCTTGTTCCTCTGAGTAGT | + |
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Preference number: 5 (lower is better) Translates to: WAPHRPRSCRWGGQCICWPSHGY*LVPLSS Trigger: ACTACTCAGAGGAACAAGCAAATAGCCATGGGAAGG...CCAGCAGATACACTGGCCTCCCCAGCGGCAGGACCGGGGACGATGTGGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTGACCAAGGCCTGGACAAGGTaGAGATCAGCAAACTCATGC | + |
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Preference number: 5 (lower is better) Translates to: SPKVNARPVAGRRHSQLTKAWTR*RSANSC Trigger: GCATGAGTTTGCTGATCTCAACCTTGTCCAGGCCTT...GGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | TGTTGTGGACAAGGGTCCCCAAAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGAGCAGGCCTTGATGACTaGACCTTTGTGACTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: CCGQGSPKVNARPVAGRRAGLDD*TFVTGV Trigger: AACCCCAGTCACAAAGGTCAAGTCATCAAGGCCTGC...TCTCCTTCCTGCCACCGGCCTGGCATTGACCTTTGGGGACCCTTGTCCACAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS-3UTR CAA 90 bp | AAGGTCAATGCCAGGCCGGTGGCAGGAAGGAGACACTCCCAGCTGACCAATGTCGCAGGCCTTGATGACTaGACCTTTGTGACTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: KVNARPVAGRRHSQLTNVAGLDD*TFVTGV Trigger: AACCCCAGTCACAAAGGTCAAGTCATCAAGGCCTGC...GACATTGGTCAGCTGGGAGTGTCTCCTTCCTGCCACCGGCCTGGCATTGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 |
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| CDS CCA 90 bp | TCCAAAAGTTCTTCTCGCTCTTCTAATGACAGGTCTTCAGGCACTTaGCGGCTCCGAGGGAAACGTTCAGGACTGTTTGTCGTAGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SKSSSRSSNDRSSGT*RLRGKRSGLFVVVF Trigger: GAAGACTACGACAAACAGTCCTGAACGTTTCCCTCGGAGCCGCCAAGTGCCTGAAGACCTGTCATTAGAAGAGCGAGAAGAACTTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177281.8 |
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| CDS CCA 72 bp | ACGGTCTTGTTCAGGCCCTCTCCTTTGTACAGAAACTaGGCGACATCCTCTGGGGAGCTCTGCAGCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: TVLFRPSPLYRN*ATSSGELCSRS Trigger: CGACCTGCTGCAGAGCTCCCCAGAGGATGTCGCCCAGTTTCTGTACAAAGGAGAGGGCCTGAACAAGACCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000110727.2 ENSMUST00000116456.10 ENSMUST00000131436.8 |
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| CDS CCA 72 bp | TCTTCTCGCTCTTCTAATGACAGGTCTTCAGGCACTTaGCGGCTCCGAGGGAAACGTTCAGGACTGTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSRSSNDRSSGT*RLRGKRSGLFV Trigger: GACAAACAGTCCTGAACGTTTCCCTCGGAGCCGCCAAGTGCCTGAAGACCTGTCATTAGAAGAGCGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177281.8 |
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| CDS TCA 72 bp | TTGCTTGTTCCTCTGAGTAGTTTTGCTCTCCTCCACTaGAGTCAGGTTGTCAATCTCCGTCATCACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLVPLSSFALLH*SQVVNLRHHFC Trigger: GCAGAAGTGATGACGGAGATTGACAACCTGACTTCAGTGGAGGAGAGCAAAACTACTCAGAGGAACAAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000116456.10 ENSMUST00000177281.8 |
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