Pregenerated sensors for CYTH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003269Ensembl transcript IDs: ENSMUST00000056820.13, ENSMUST00000107729.10, ENSMUST00000209245.2, ENSMUST00000210137.2, ENSMUST00000210853.3, ENSMUST00000210898.2, ENSMUST00000211263.2, ENSMUST00000211783.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGCACTCAGCACCCACAGGGCTTGAGTGACTTGTCTGGGATGTaGCTGTCTGCACCCTATATGCAGCCCAGCATCCTGGTAAATGTC | + |
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Preference number: 1 (lower is better) Translates to: LCTQHPQGLSDLSGM*LSAPYMQPSILVNV Trigger: GACATTTACCAGGATGCTGGGCTGCATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR GCA 90 bp | TTCCCAGAAGGCTCCGGGACAGCATTCATTCTTCCCAGTCAAGCCTaGATGCTAAAGCATGCTGGGAAGAAGCAGGCAGGATTCAGACTT | + |
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Preference number: 1 (lower is better) Translates to: FPEGSGTAFILPSQA*MLKHAGKKQAGFRL Trigger: AAGTCTGAATCCTGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAATGCTGTCCCGGAGCCTTCTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR CCA 90 bp | GACAGCATTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTaGGAAGAAGCAGGCAGGATTCAGACTTTAAGCTCACCACAGGCC | + |
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Preference number: 1 (lower is better) Translates to: DSIHSSQSSLHAKAC*EEAGRIQTLSSPQA Trigger: GGCCTGTGGTGAGCTTAAAGTCTGAATCCTGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAATGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR CAA 90 bp | ACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTTGAGTGACTaGTCTGGGATGTGCCTGTCTGCACCCTATATGCAGCCCAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TVNSLCTQHPQGLSD*SGMCLSAPYMQPSI Trigger: GATGCTGGGCTGCATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR CAA 90 bp | CACACTGAGACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTaGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCCTATATGCAG | + |
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Preference number: 2 (lower is better) Translates to: HTETVNSLCTQHPQG*SDLSGMCLSAPYMQ Trigger: CTGCATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGTCTCAGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR TCA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCACCCACAGGGCTTGAGTaGCTTGTCTGGGATGTGCCT | + |
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Preference number: 2 (lower is better) Translates to: FILPSQACMLKHAGKKQAPTGLE*LVWDVP Trigger: AGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGG...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCAGCCTGCTCCTGGGTGGGTGCTaGGATTCGGTACACCATGTG | + |
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Preference number: 2 (lower is better) Translates to: LLSCCQHLIEGVHTYSSLLLGGC*DSVHHV Trigger: CACATGGTGTACCGAATCTCAGCACCCACCCAGGAG...CAGGCTGCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR CAA 90 bp | TTTCCTAGGAGACAAGACGGCCACTGTGAAGACTGCCACTGTCTATaGACACGTAGCCTGAGCCAAAGCCCACCTAAAATAGAGCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: FPRRQDGHCEDCHCL*TRSLSQSPPKIEPG Trigger: TCCAGGCTCTATTTTAGGTGGGCTTTGGCTCAGGCTACGTGTCAATAGACAGTGGCAGTCTTCACAGTGGCCGTCTTGTCTCCTAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGTTTGCAAATCCAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTGGCCTTCTCAGGACTTaGTCCCTCCTGAGCCAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QGFANPIHTFWNLNSQKAGLLRT*SLLSQS Trigger: GGACTGGCTCAGGAGGGAGCAAGTCCTGAGAAGGCC...AGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTGGATTTGCAAACCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCAGCCTGCTTTCTCCTCCTGGGTaGGTGCTGAGATTCGGTACA | + |
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Preference number: 2 (lower is better) Translates to: LLSCCQHLIEGVHTYSSLLSPPG*VLRFGT Trigger: TGTACCGAATCTCAGCACCCACCCAGGAGGAGAAAG...CAGGCTGCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR-3UTR TCA 90 bp | CAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTCCGGGACAGCATTCATGGACTTGCTCCCTCCTaGGCCAGTCCTTTGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: QYTRSGILIPRRLRDSIHGLAPS*ASPLLF Trigger: AAACAACAAAGGACTGGCTCAGGAGGGAGCAAGTCC...ATGAATGCTGTCCCGGAGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR TCA 90 bp | GTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTGCAGCCTGGATGGATTTaGTCCACTCATCTTTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VHTYSSLDGFDPLIFLLLQPGWI*STHLSP Trigger: AGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTG...CAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR-3UTR CCA 90 bp | AATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCCTTTCTCCTCCTGGGTaGGTGCTGAGATTCGGTACA | + |
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Preference number: 2 (lower is better) Translates to: NSLLSCCQHLIEGVHTYSLSPPG*VLRFGT Trigger: TGTACCGAATCTCAGCACCCACCCAGGAGGAGAAAG...GCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR-3UTR GCA 90 bp | CAGGGGTTTGCAAATCCAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTACAGTAAACTCTCTCTaGACTCAGCACCCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QGFANPIHTFWNLNSQKATVNSL*TQHPQG Trigger: GCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGT...AGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTGGATTTGCAAACCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCGCTGTCCCTTATTGTTaGGAATGTAAAGCTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: GVHTYSSLDGFDPLIFLLAVPYC*ECKAQS Trigger: GCTTTGAGCTTTACATTCCCAACAATAAGGGACAGC...GAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| 3UTR CAA 90 bp | GTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGCTTCTTTCTaGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: VRVVLASSSQKFASF*LPTSHRRGPHLQQP Trigger: AGGCTGCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR-3UTR CCA 90 bp | CAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTCCGGGACAGCATTCATCCAACATTAACATGGTaGGCAGAGCACATGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QYTRSGILIPRRLRDSIHPTLTW*AEHMES Trigger: ACTCTCCATGTGCTCTGCCCACCATGTTAATGTTGG...ATGAATGCTGTCCCGGAGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGCTTCTTTCTTGCTGCTGTCCCTTATTGTTaGGAATGTAAAGCTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: RGQGCSCFFFTEIRFFLAAVPYC*ECKAQS Trigger: GCTTTGAGCTTTACATTCCCAACAATAAGGGACAGC...AGCAAGAAAGAAGCGAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| 3UTR GCA 72 bp | CAGCACCCACAGGGCTTGAGTGACTTGTCTGGGATGTaGCTGTCTGCACCCTATATGCAGCCCAGCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: QHPQGLSDLSGM*LSAPYMQPSIL Trigger: CAGGATGCTGGGCTGCATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CAA 90 bp | CGTTCTGGAATCTTAATTCCCAGAAGGCTCCGGGACAGCATTCATTCTTCCCAGGGGCCTTCTCAGGACTaGCTCCCTCCTGAGCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: RSGILIPRRLRDSIHSSQGPSQD*LPPEPV Trigger: GACTGGCTCAGGAGGGAGCAAGTCCTGAGAAGGCCC...CTGGGAAGAATGAATGCTGTCCCGGAGCCTTCTGGGAATTAAGATTCCAGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CAA 90 bp | CTCCGGGACAGCATTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGCAGGGCTTGAGTGACTaGTCTGGGATGTGCCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: LRDSIHSSQSSLHAKACWQGLSD*SGMCLS Trigger: AGACAGGCACATCCCAGACAAGTCACTCAAGCCCTG...CCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAATGCTGTCCCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR TCA 72 bp | AGAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTaGTCCACTCATCTTTCTCCTCCTGGGTGGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RRGPHLQQPGWI*STHLSPPGWVL Trigger: CAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR CCA 72 bp | GACTATTCCCCCAGCAGCACAGGAGCACAAGACCATTaGGGTCTCTGCATTATTCCTTCACCGAGATCCCCT | + |
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Preference number: 3 (lower is better) Translates to: DYSPSSTGAQDH*GLCIIPSPRSP Trigger: AGGGGATCTCGGTGAAGGAATAATGCAGAGACCCCAATGGTCTTGTGCTCCTGTGCTGCTGGGGGAATAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CAA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCACAGCACCCACAGGGCTaGAGTGACTTGTCTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: FILPSQACMLKHAGKKQAQHPQG*SDLSGM Trigger: CATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTG...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR TCA 72 bp | AAACTCTCTCTGCACTCAGCACCCACAGGGCTTGAGTaGCTTGTCTGGGATGTGCCTGTCTGCACCCTATAT | + |
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Preference number: 3 (lower is better) Translates to: KLSLHSAPTGLE*LVWDVPVCTLY Trigger: ATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR CCA 72 bp | GCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTaGGTGGGTGCTGAGATTCGGTACACCATGTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: AWMDLIHSSFSS*VGAEIRYTMWF Trigger: GAACCACATGGTGTACCGAATCTCAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| 3UTR-3UTR CAA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCACAGGGCTTGAGTGACTaGTCTGGGATGTGCCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: FILPSQACMLKHAGKKQAQGLSD*SGMCLS Trigger: AGACAGGCACATCCCAGACAAGTCACTCAAGCCCTG...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR CCA 72 bp | GCTAGGTCTCCAATGAGCACAGGTCCAACATTAACATaGTGGGCAGAGCACATGGAGAGTATGCTGTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: ARSPMSTGPTLT*WAEHMESMLCL Trigger: TAGGCACAGCATACTCTCCATGTGCTCTGCCCACCATGTTAATGTTGGACCTGTGCTCATTGGAGACCTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGGGTTTGCAAATCCAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTCAGCACCCACAGGGCTaGAGTGACTTGTCTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: QGFANPIHTFWNLNSQKAQHPQG*SDLSGM Trigger: CATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTG...AGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTGGATTTGCAAACCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR TCA 72 bp | GTCTCTGCATTATTCCTTCACCGAGATCCCCTCTCATaGGTCAGAAACACACACCTCCACAGGAGGCTAGAT | + |
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Preference number: 3 (lower is better) Translates to: VSALFLHRDPLS*VRNTHLHRRLD Trigger: ATCTAGCCTCCTGTGGAGGTGTGTGTTTCTGACTCATGAGAGGGGATCTCGGTGAAGGAATAATGCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR GCA 72 bp | GTGCCTAAATACCACACTGAGACAGTAAACTCTCTCTaGACTCAGCACCCACAGGGCTTGAGTGACTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: VPKYHTETVNSL*TQHPQGLSDLS Trigger: AGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGTCTCAGTGTGGTATTTAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGATTTGATCCACTCATCTTTCTCCTCCTGGGTGGGTGCTGAGATTCGGTACTCTGTTTTGCAGGCTTaGATGAGCTGTCCCTTATTG | + |
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Preference number: 3 (lower is better) Translates to: MDLIHSSFSSWVGAEIRYSVLQA*MSCPLL Trigger: CAATAAGGGACAGCTCATCAAAGCCTGCAAAACAGA...GTACCGAATCTCAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | GGGAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATCTGCAAGGGAAGGGGTaGGAGGGGCCGGGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GNVKLKAVRLPRIVHLPDLQGKG*EGPGSQ Trigger: CTGGGAGCCCGGCCCCTCCCACCCCTTCCCTTGCAG...ATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210853.3 |
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| CDS-3UTR TCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTGCCCGCGGGCTCGAGTaGGCCCGCTCAAACGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGARGLE*ARSNAP Trigger: TGGGGCGTTTGAGCGGGCTCACTCGAGCCCGCGGGC...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
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| CDS-3UTR CCA 90 bp | CGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGATAATCCCTCGGTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGSSTSRMLRFSRGIIPRSSRRR*ISTSSS Trigger: GGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGA...CCGAGGGATTATCCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | CAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGGGAAGACCCCAGGGTTaGATAAGCAGTATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QFGFRGSSTSRMLRFSRGGRPQG*ISSISG Trigger: CCCAGAGATACTGCTTATGCAACCCTGGGGTCTTCC...CCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTG 59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | CGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGATAATCCCTCGGTCTTACTGCCCTCATTaGCCTCCAGACCCTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: RGSSTSRMLRFSRGIIPRSYCPH*PPDPPP Trigger: AGGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGA...CCGAGGGATTATCCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | CAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGCAGGTGTCTGTAGACTaGAAGACCCCAGGGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: QFGFRGSSTSRMLRFSRGQVSVD*KTPGLH Trigger: ATGCAACCCTGGGGTCTTCCAGTCTACAGACACCTG...CCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | CAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGTGTTCTCCAACTCCATaGGCTCCTCTGGAGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QFGFRGSSTSRMLRFSRGCSPTP*APLESS Trigger: ACTTGACTCCAGAGGAGCGCATGGAGTTGGAGAACA...CCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | CGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGATAATCCCTCGGATCTTCCGGTTCCGCTaGAAGGTCTTACTGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: RGSSTSRMLRFSRGIIPRIFRFR*KVLLPS Trigger: TGAGGGCAGTAAGACCTTGCAGCGGAACCGGAAGAT...CCGAGGGATTATCCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | GGGAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATAATTGCCGGAGGGCCTaGACCAGGTTGAGGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: GNVKLKAVRLPRIVHLPDNCRRA*TRLRSV Trigger: CACCGACCTCAACCTGGTGCAGGCCCTCCGGCAATT...ATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | ATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAACTCCATGCGCTCCTCTaGAGTCAAGTCTGGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: MQPSILVNVKGMGPQLSQLHALL*SQVWGL Trigger: GAGCCCCCAGACTTGACTCCAGAGGAGCGCATGGAG...TTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | TGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTCACTCCATGCGCTCCTCTaGAGTCAAGTCTGGGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CKAQSSSASEDRPPPGCSLHALL*SQVWGL Trigger: GAGCCCCCAGACTTGACTCCAGAGGAGCGCATGGAG...TGAGCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | CACCCACAGGGCTTGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCCTATATGTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPQGLSDLSGMCLSAPYMSSRRR*ISTSSS Trigger: GGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGA...CATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | GAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ECKAQSSSASEDRPPPGCSSRRR*ISTSSS Trigger: GGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGA...GCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTAGACACCGTCCTCCATaGCGGCTAGGAAGGCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGRHRPP*RLGRPA Trigger: CGCGGGCCTTCCTAGCCGCCATGGAGGACGGTGTCT...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR TCA 90 bp | ATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAACTCCTGGGTGGGTGCTaGGATTCGGTACACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: MQPSILVNVKGMGPQLSQLLGGC*DSVHHV Trigger: CACATGGTGTACCGAATCTCAGCACCCACCCAGGAG...TTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCACCCTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTAATTGCCGGAGGGCCTaGACCAGGTTGAGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSAPYMQPSILVNVKGMGNCRRA*TRLRSV Trigger: CACCGACCTCAACCTGGTGCAGGCCCTCCGGCAATT...ACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAGGGTGCAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | CTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LYAAQHPGKCQGDGSSALSSRRR*ISTSSS Trigger: GGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGA...GAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR TCA 90 bp | GGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGCGGCCCGGCTTGTCCCTaGCATTGGGATTGTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVGDRGQGCSCFFFTEIRGPACP*HWDCEG Trigger: GCCTTCACAATCCCAATGTCAGGGACAAGCCGGGCC...GCGAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTCAGCTCTCCCAAACCCAAGAAATGAGGGCATCTGCAGGCGCAAGGGATGTTCTCCAACTCCATaGGCTCCTCTGGAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSALPNPRNEGICRRKGCSPTP*APLESS Trigger: ACTTGACTCCAGAGGAGCGCATGGAGTTGGAGAACA...TCCCTTGCGCCTGCAGATGCCCTCATTTCTTGGGTTTGGGAGAGCTGAGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAAACCCAAGAAATGAGCTCCATGCGCTCCTCTaGAGTCAAGTCTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGKCQGDGSSALPNPRNELHALL*SQVWGL Trigger: GAGCCCCCAGACTTGACTCCAGAGGAGCGCATGGAG...CTCATTTCTTGGGTTTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTCTCCATGCGCTCCTCTaGAGTCAAGTCTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGLHALL*SQVWGL Trigger: GAGCCCCCAGACTTGACTCCAGAGGAGCGCATGGAG...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR CCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGSSRRR*ISTSSS Trigger: GGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGA...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| 3UTR CAA 72 bp | TCTCTCTGCACTCAGCACCCACAGGGCTTGAGTGACTaGTCTGGGATGTGCCTGTCTGCACCCTATATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLCTQHPQGLSD*SGMCLSAPYMQ Trigger: CTGCATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| 3UTR CAA 72 bp | ACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTaGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TVNSLCTQHPQG*SDLSGMCLSAP Trigger: GGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR TCA 90 bp | AACATGGTGGGCAGAGCACATGGAGAGTATGCTGTGCCTAAATACCACACTGAGGGCCCGGCTTGTCCCTaGCATTGGGATTGTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NMVGRAHGEYAVPKYHTEGPACP*HWDCEG Trigger: GCCTTCACAATCCCAATGTCAGGGACAAGCCGGGCC...CTCAGTGTGGTATTTAGGCACAGCATACTCTCCATGTGCTCTGCCCACCATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGGGCCCGGCTTGTCCCTaGCATTGGGATTGTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSWGQGSGLFLLLLHRNSGPACP*HWDCEG Trigger: GCCTTCACAATCCCAATGTCAGGGACAAGCCGGGCC...CGAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | TGGGAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGAATCTTCCGGTTCCGCTaGAAGGTCTTACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WECKAQSSSASEDRPPPGIFRFR*KVLLPS Trigger: TGAGGGCAGTAAGACCTTGCAGCGGAACCGGAAGAT...TCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | GCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTGGGTGGGTGCTGAGATCTTCCGGTTCCGCTaGAAGGTCTTACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AAWMDLIHSSFSSWVGAEIFRFR*KVLLPS Trigger: TGAGGGCAGTAAGACCTTGCAGCGGAACCGGAAGAT...CTCAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | GAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCTTTCTCAATTGCCGGAGGGCCTaGACCAGGTTGAGGTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGVHTYSSLDGFDPLIFLNCRRA*TRLRSV Trigger: CACCGACCTCAACCTGGTGCAGGCCCTCCGGCAATT...GAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | CTCATAGAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCCTCCATGCGCTCCTCTaGAGTCAAGTCTGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIEGVHTYSSLDGFDPLILHALL*SQVWGL Trigger: GAGCCCCCAGACTTGACTCCAGAGGAGCGCATGGAG...GATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTCTATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| 3UTR CAA 72 bp | CAGTTCCTAGTGACCGACTCGGGGCCTTCTCAGGACTaGCTCCCTCCTGAGCCAGTCCTTTGTTGTTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QFLVTDSGPSQD*LPPEPVLCCFS Trigger: ACTAAAACAACAAAGGACTGGCTCAGGAGGGAGCAAGTCCTGAGAAGGCCCCGAGTCGGTCACTAGGAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| 3UTR CAA 72 bp | AGACTATTCCCCCAGCAGCACAGGAGCACAAGACCATaGGGGTCTCTGCATTATTCCTTCACCGAGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFPQQHRSTRP*GSLHYSFTEIP Trigger: GGGGATCTCGGTGAAGGAATAATGCAGAGACCCCAATGGTCTTGTGCTCCTGTGCTGCTGGGGGAATAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR TCA 90 bp | ATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAATGTCGTAGAGGTTCCTaGGAAGATCCTCAGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: MQPSILVNVKGMGPQLSQCRRGS*EDPQAD Trigger: ATCTGCCTGAGGATCTTCTCAGGAACCTCTACGACA...TTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR TCA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCACTCCTGGGTGGGTGCTaGGATTCGGTACACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FILPSQACMLKHAGKKQALLGGC*DSVHHV Trigger: CACATGGTGTACCGAATCTCAGCACCCACCCAGGAG...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR GCA 90 bp | GGGAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATTGTTCTCCAACTCCATaGGCTCCTCTGGAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNVKLKAVRLPRIVHLPDCSPTP*APLESS Trigger: ACTTGACTCCAGAGGAGCGCATGGAGTTGGAGAACA...ATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCACCCTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTGGAAGACCCCAGGGTTaGATAAGCAGTATCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAPYMQPSILVNVKGMGGRPQG*ISSISG Trigger: CCCAGAGATACTGCTTATGCAACCCTGGGGTCTTCC...ACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAGGGTGCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | ATGGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MELGTGVRVVLASSSQKFSSRRR*ISTSSS Trigger: GGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGA...GAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | CCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAAACCCAAGAAATGAGTCTTACTGCCCTCATTaGCCTCCAGACCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PGKCQGDGSSALPNPRNESYCPH*PPDPPP Trigger: AGGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGA...CTCATTTCTTGGGTTTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | ACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTTGAGTGACTTGTCTGGGCAGGTGTCTGTAGACTaGAAGACCCCAGGGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVNSLCTQHPQGLSDLSGQVSVD*KTPGLH Trigger: ATGCAACCCTGGGGTCTTCCAGTCTACAGACACCTG...CCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | CTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCTCATCTTTCTCCTCCTaGGTGGGTGCTGAGATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LYAAQHPGKCQGDGSSALSSFSS*VGAEIR Trigger: CCGAATCTCAGCACCCACCCAGGAGGAGAAAGATGA...GAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCACCCTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTTCATCTTTCTCCTCCTaGGTGGGTGCTGAGATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSAPYMQPSILVNVKGMGSSFSS*VGAEIR Trigger: CCGAATCTCAGCACCCACCCAGGAGGAGAAAGATGA...ACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAGGGTGCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR TCA 90 bp | ATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAACAGCCTGGATGGATTTaGTCCACTCATCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MQPSILVNVKGMGPQLSQQPGWI*STHLSP Trigger: AGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTG...TTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR GCA 90 bp | CTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCTGTTCTCCAACTCCATaGGCTCCTCTGGAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LYAAQHPGKCQGDGSSALCSPTP*APLESS Trigger: ACTTGACTCCAGAGGAGCGCATGGAGTTGGAGAACA...GAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCATCTTACTGCCCTCATTaGCCTCCAGACCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FILPSQACMLKHAGKKQASYCPH*PPDPPP Trigger: AGGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGA...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | GCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTGGGTGGGTGCTGAGAGATCCACAAAAGCATaGAGCACAGACAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAWMDLIHSSFSSWVGAERSTKA*STDRFS Trigger: GCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATCT...CTCAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CCA 90 bp | GAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCAGATCCACAAAAGCATaGAGCACAGACAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ECKAQSSSASEDRPPPGCRSTKA*STDRFS Trigger: GCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATCT...GCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | GGGAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATAGGTCGGTGAACTCATaGAGATCCACAAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GNVKLKAVRLPRIVHLPDRSVNS*RSTKAW Trigger: CCATGCTTTTGTGGATCTCCATGAGTTCACCGACCT...ATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | AAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTCAGGTTATTCCCATCATCCTCTaGGATTTTGAAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLKAVRLPRIVHLPDAQVIPIIL*DFEGLV Trigger: AACGAGCCCTTCAAAATCCCAGAGGATGATGGGAAT...AACCTGAGCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTTGCTCCACCAAGAATTaGATCCCCTGCCCTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGCSTKN*IPCPHW Trigger: CCAATGAGGGCAGGGGATCCAATTCTTGGTGGAGCA...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAAACCCAAGAAATGAGTGTCGTAGAGGTTCCTaGGAAGATCCTCAGGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGKCQGDGSSALPNPRNECRRGS*EDPQAD Trigger: ATCTGCCTGAGGATCTTCTCAGGAACCTCTACGACA...CTCATTTCTTGGGTTTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR TCA 90 bp | CTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCAGCCTGGATGGATTTaGTCCACTCATCTTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYAAQHPGKCQGDGSSALQPGWI*STHLSP Trigger: AGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTG...GAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTTGTTCTCCAACTCCATaGGCTCCTCTGGAGTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGCSPTP*APLESS Trigger: ACTTGACTCCAGAGGAGCGCATGGAGTTGGAGAACA...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR GCA 90 bp | AGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCAGGATTCAGACTTATCTTCCGGTTCCGCTaGAAGGTCTTACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQACMLKHAGKKQAGFRLIFRFR*KVLLPS Trigger: TGAGGGCAGTAAGACCTTGCAGCGGAACCGGAAGAT...AAGTCTGAATCCTGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCAGGAAGACCCCAGGGTTaGATAAGCAGTATCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FILPSQACMLKHAGKKQAGRPQG*ISSISG Trigger: CCCAGAGATACTGCTTATGCAACCCTGGGGTCTTCC...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | TGCCAACATCTCATAGAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTGATTCTTACTGCCCTCATTaGCCTCCAGACCCTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CQHLIEGVHTYSSLDGFDSYCPH*PPDPPP Trigger: AGGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGA...ATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | CATCTCATAGAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCCAGGTGTCTGTAGACTaGAAGACCCCAGGGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HLIEGVHTYSSLDGFDPLQVSVD*KTPGLH Trigger: ATGCAACCCTGGGGTCTTCCAGTCTACAGACACCTG...GAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTCTATGAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | AGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCAGGATTCAGACTTCTTTCTCCTCCTGGGTaGGTGCTGAGATTCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SQACMLKHAGKKQAGFRLLSPPG*VLRFGT Trigger: TGTACCGAATCTCAGCACCCACCCAGGAGGAGAAAG...AAGTCTGAATCCTGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | ACTTGCTCCCTCCTGAGCCAGTCCTTTGTTGTTTTAGTCTTAGTCTCCTGTGCTATCTTCCGGTTCCGCTaGAAGGTCTTACTGCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TCSLLSQSFVVLVLVSCAIFRFR*KVLLPS Trigger: TGAGGGCAGTAAGACCTTGCAGCGGAACCGGAAGAT...AGCACAGGAGACTAAGACTAAAACAACAAAGGACTGGCTCAGGAGGGAGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | CACCCACAGGGCTTGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCCTATATGTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HPQGLSDLSGMCLSAPYMFCRSS*STKNWI Trigger: GATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAA...CATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAAACCCAAGAAATGAGAGGTCGGTGAACTCATaGAGATCCACAAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PGKCQGDGSSALPNPRNERSVNS*RSTKAW Trigger: CCATGCTTTTGTGGATCTCCATGAGTTCACCGACCT...CTCATTTCTTGGGTTTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | ACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTTGAGTGACTTGTCTGGGATTCCCATCATCCTCTaGGATTTTGAAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVNSLCTQHPQGLSDLSGIPIIL*DFEGLV Trigger: AACGAGCCCTTCAAAATCCCAGAGGATGATGGGAAT...CCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | CACCCACAGGGCTTGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCCTATATGGCTGTCCCTTATTGTTaGGAATGTAAAGCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPQGLSDLSGMCLSAPYMAVPYC*ECKAQS Trigger: GCTTTGAGCTTTACATTCCCAACAATAAGGGACAGC...CATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGGCAGGATTCAGACTTTAAGCTCACCACAGGCCAGGAAGAGTAACAAACTTTCTCCTCCTGGGTaGGTGCTGAGATTCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: EAGRIQTLSSPQARKSNKLSPPG*VLRFGT Trigger: TGTACCGAATCTCAGCACCCACCCAGGAGGAGAAAG...TTTGTTACTCTTCCTGGCCTGTGGTGAGCTTAAAGTCTGAATCCTGCCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| 3UTR CAA 72 bp | AGACAAGACGGCCACTGTGAAGACTGCCACTGTCTATaGACACGTAGCCTGAGCCAAAGCCCACCTAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RQDGHCEDCHCL*TRSLSQSPPKI Trigger: TATTTTAGGTGGGCTTTGGCTCAGGCTACGTGTCAATAGACAGTGGCAGTCTTCACAGTGGCCGTCTTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | TACAGCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTGGGTGGGTGCTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YSSLDGFDPLIFLLLGGCFCRSS*STKNWI Trigger: GATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAA...GCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | AATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCGGAAGACCCCAGGGTTaGATAAGCAGTATCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLLSCCQHLIEGVHTYSGRPQG*ISSISG Trigger: CCCAGAGATACTGCTTATGCAACCCTGGGGTCTTCC...GCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CCA 90 bp | AACATGGTGGGCAGAGCACATGGAGAGTATGCTGTGCCTAAATACCACACTGAGAGGTCGGTGAACTCATaGAGATCCACAAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NMVGRAHGEYAVPKYHTERSVNS*RSTKAW Trigger: CCATGCTTTTGTGGATCTCCATGAGTTCACCGACCT...CTCAGTGTGGTATTTAGGCACAGCATACTCTCCATGTGCTCTGCCCACCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | GCACATGGAGAGTATGCTGTGCCTAAATACCACACTGAGACAGTAAACTCTCTCCAGGTGTCTGTAGACTaGAAGACCCCAGGGTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHGEYAVPKYHTETVNSLQVSVD*KTPGLH Trigger: ATGCAACCCTGGGGTCTTCCAGTCTACAGACACCTG...GAGAGAGTTTACTGTCTCAGTGTGGTATTTAGGCACAGCATACTCTCCATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | TTGATCCACTCATCTTTCTCCTCCTGGGTGGGTGCTGAGATTCGGTACACCATGATTCCCATCATCCTCTaGGATTTTGAAGGGCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LIHSSFSSWVGAEIRYTMIPIIL*DFEGLV Trigger: AACGAGCCCTTCAAAATCCCAGAGGATGATGGGAAT...CATGGTGTACCGAATCTCAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | TACCACACTGAGACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTTGAGTTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YHTETVNSLCTQHPQGLSFCRSS*STKNWI Trigger: GATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAA...ACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGTCTCAGTGTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DPQKHGAQTGSALPFPLGFCRSS*STKNWI Trigger: GATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAA...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCATCGCTTCTTTCTTGCTaGCAACATCTCATAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FILPSQACMLKHAGKKQASLLSC*QHLIEG Trigger: CCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGA...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | ACTTGCTCCCTCCTGAGCCAGTCCTTTGTTGTTTTAGTCTTAGTCTCCTGTGCTAGATCCACAAAAGCATaGAGCACAGACAGGTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCSLLSQSFVVLVLVSCARSTKA*STDRFS Trigger: GCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATCT...AGCACAGGAGACTAAGACTAAAACAACAAAGGACTGGCTCAGGAGGGAGCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | ATGGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCAGGTCGGTGAACTCATaGAGATCCACAAAAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: MELGTGVRVVLASSSQKFRSVNS*RSTKAW Trigger: CCATGCTTTTGTGGATCTCCATGAGTTCACCGACCT...GAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | GTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTGTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: VHTYSSLDGFDPLIFLLLFCRSS*STKNWI Trigger: GATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAA...CAGGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | CTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCAATTCGCTTCTTTCTTaGTGCCAACATCTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LYAAQHPGKCQGDGSSALNSLLS*CQHLIE Trigger: TTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATT...GAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | CAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTCCGGGACAGCATTCATTCGCTTCTTTCTTGCTaGCAACATCTCATAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYTRSGILIPRRLRDSIHSLLSC*QHLIEG Trigger: CCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGA...ATGAATGCTGTCCCGGAGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CCA 90 bp | CTGAGCCAGTCCTTTGTTGTTTTAGTCTTAGTCTCCTGTGCTAGGCTAGGTCTCGCTGTCCCTTATTGTTaGGAATGTAAAGCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSFVVLVLVSCARLGLAVPYC*ECKAQS Trigger: GCTTTGAGCTTTACATTCCCAACAATAAGGGACAGC...GAGACCTAGCCTAGCACAGGAGACTAAGACTAAAACAACAAAGGACTGGCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| 3UTR CAA 72 bp | CAGATCAGTGCTGTTGGGGTACACACCCACAGGGGTTaGCAAATCCAATACACACGTTCTGGAATCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: QISAVGVHTHRG*QIQYTRSGILI Trigger: AATTAAGATTCCAGAACGTGTGTATTGGATTTGCAAACCCCTGTGGGTGTGTACCCCAACAGCACTGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR GCA 90 bp | AATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: NSLLSCCQHLIEGVHTYSFCRSS*STKNWI Trigger: GATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAA...GCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
||
| CDS-3UTR GCA 90 bp | CGTTCTGGAATCTTAATTCCCAGAAGGCTCCGGGACAGCATTCATTCTTCCCAGAATTCGCTTCTTTCTTaGTGCCAACATCTCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSGILIPRRLRDSIHSSQNSLLS*CQHLIE Trigger: TTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATT...CTGGGAAGAATGAATGCTGTCCCGGAGCCTTCTGGGAATTAAGATTCCAGAACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CCA 90 bp | TCACAGAAATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACGCTGTCCCTTATTGTTaGGAATGTAAAGCTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQKFASFLLPTSHRRGPHAVPYC*ECKAQS Trigger: GCTTTGAGCTTTACATTCCCAACAATAAGGGACAGC...GTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTTCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210137.2 |
||
| 3UTR CAA 72 bp | GTTCTTGCTTCTTCTTCACAGAAATTCGCTTCTTTCTaGCTGCCAACATCTCATAGAAGGGGTCCACACTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLASSSQKFASF*LPTSHRRGPHL Trigger: TAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTTCTGTGAAGAAGAAGCAAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | CGAGGATCGTCCACCTCCCGGATGCTCAGGTTCTCTAGGGGGATAATCCCTCGGGTCTTACTGCCCTCATaGGCCTCCAGACCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGSSTSRMLRFSRGIIPRVLLPS*ASRPST Trigger: GGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGAC...CCGAGGGATTATCCCCCTAGAGAACCTGAGCATCCGGGAGGTGGACGATCCTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | GGGTACTCATGGACAGCACAGCCAGTTCCTAGTGACCGACTCGGGGCCTTCTCACGCTCCAGGCCCGGCTaGTCCCTGACATTGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: GYSWTAQPVPSDRLGAFSRSRPG*SLTLGL Trigger: CAATCCCAATGTCAGGGACAAGCCGGGCCTGGAGCG...TGAGAAGGCCCCGAGTCGGTCACTAGGAACTGGCTGTGCTGTCCATGAGTACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | ATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTCCTCAGCTCTCCCAAAGGGCCTGCACCAGGTaGAGGTCGGTGAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: MQPSILVNVKGMGPQLSQRACTR*RSVNSW Trigger: CCATGAGTTCACCGACCTCAACCTGGTGCAGGCCCT...TTGGGAGAGCTGAGGACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CAA 90 bp | CACCCACAGGGCTTGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCCTATATGAGGGCCTGCACCAGGTaGAGGTCGGTGAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: HPQGLSDLSGMCLSAPYMRACTR*RSVNSW Trigger: CCATGAGTTCACCGACCTCAACCTGGTGCAGGCCCT...CATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CAA 90 bp | GAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCAGGGCCTGCACCAGGTaGAGGTCGGTGAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ECKAQSSSASEDRPPPGCRACTR*RSVNSW Trigger: CCATGAGTTCACCGACCTCAACCTGGTGCAGGCCCT...GCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CAA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTGATCCCCTGCCCTCATaGGCCTCCAGACCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: DPQKHGAQTGSALPFPLGDPLPS*ASRPST Trigger: GGTGGAGGGTCTGGAGGCCAATGAGGGCAGGGGATC...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR CAA 90 bp | GAATGTAAAGCTCAAAGCAGTTCGGCTTCCGAGGATCGTCCACCTCCCGGATGCTTCAGCCCCTCGCCCTaGTACAGGAAGCGGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: ECKAQSSSASEDRPPPGCFSPSP*YRKRAI Trigger: AATTGCCCGCTTCCTGTACAAGGGCGAGGGGCTGAA...GCATCCGGGAGGTGGACGATCCTCGGAAGCCGAACTGCTTTGAGCTTTACATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS GCA 90 bp | CCCTCGCCCTTGTACAGGAAGCGGGCAATTTCCTCAGGCGTGTTCTaGAGAAGTTCATGCTCCACCAAGAATTGGATCCCCTGCCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PSPLYRKRAISSGVF*RSSCSTKNWIPCPH Trigger: ATGAGGGCAGGGGATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAACACGCCTGAGGAAATTGCCCGCTTCCTGTACAAGGGCGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAACTCTCTCTGCACTCAGCACCCACAGGGCTTGAGTGACTTGTCTGGGTTCAGCCCCTCGCCCTaGTACAGGAAGCGGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: TVNSLCTQHPQGLSDLSGFSPSP*YRKRAI Trigger: AATTGCCCGCTTCCTGTACAAGGGCGAGGGGCTGAA...CCCAGACAAGTCACTCAAGCCCTGTGGGTGCTGAGTGCAGAGAGAGTTTACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS GCA 90 bp | CCCTCGCCCTTGTACAGGAAGCGGGCAATTTCCTCAGGCGTGTTCTaGAGAAGTTCATGCTCCACCAAGAATTGGATCCCCTTTTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLYRKRAISSGVF*RSSCSTKNWIPFLG Trigger: CCCCAAAAAGGGGATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAACACGCCTGAGGAAATTGCCCGCTTCCTGTACAAGGGCGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 ENSMUST00000211263.2 ENSMUST00000211783.2 |
||
| CDS GCA 90 bp | TACAGGAAGCGGGCAATTTCCTCAGGCGTGTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATCCCCTGCCCTCATTGGCCTCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YRKRAISSGVFCRSS*STKNWIPCPHWPPD Trigger: GTCTGGAGGCCAATGAGGGCAGGGGATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAACACGCCTGAGGAAATTGCCCGCTTCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
||
| CDS-3UTR CAA 90 bp | ATGGATTTGATCCACTCATCTTTCTCCTCCTGGGTGGGTGCTGAGATTCGGTACAGGGCCTGCACCAGGTaGAGGTCGGTGAACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: MDLIHSSFSSWVGAEIRYRACTR*RSVNSW Trigger: CCATGAGTTCACCGACCTCAACCTGGTGCAGGCCCT...GTACCGAATCTCAGCACCCACCCAGGAGGAGAAAGATGAGTGGATCAAATCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CAA 90 bp | CACCCACAGGGCTTGAGTGACTTGTCTGGGATGTGCCTGTCTGCACCCTATATGTGGAAGACCCCAGGGTaGCATAAGCAGTATCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPQGLSDLSGMCLSAPYMWKTPG*HKQYLW Trigger: CCAGAGATACTGCTTATGCAACCCTGGGGTCTTCCA...CATATAGGGTGCAGACAGGCACATCCCAGACAAGTCACTCAAGCCCTGTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CAA 90 bp | CTGAGCCAGTCCTTTGTTGTTTTAGTCTTAGTCTCCTGTGCTAGGCTAGGTCTCCGCTCCAGGCCCGGCTaGTCCCTGACATTGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQSFVVLVLVSCARLGLRSRPG*SLTLGL Trigger: CAATCCCAATGTCAGGGACAAGCCGGGCCTGGAGCG...GAGACCTAGCCTAGCACAGGAGACTAAGACTAAAACAACAAAGGACTGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
||
| CDS-3UTR CAA 90 bp | TGCCAACATCTCATAGAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTGATCGCTCCAGGCCCGGCTaGTCCCTGACATTGGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: CQHLIEGVHTYSSLDGFDRSRPG*SLTLGL Trigger: CAATCCCAATGTCAGGGACAAGCCGGGCCTGGAGCG...ATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
||
| CDS-3UTR CAA 90 bp | ACTTGCTCCCTCCTGAGCCAGTCCTTTGTTGTTTTAGTCTTAGTCTCCTGTGCTGTCTTACTGCCCTCATaGGCCTCCAGACCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TCSLLSQSFVVLVLVSCAVLLPS*ASRPST Trigger: GGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGAC...AGCACAGGAGACTAAGACTAAAACAACAAAGGACTGGCTCAGGAGGGAGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | AATGGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGCTCCAGGCCCGGCTaGTCCCTGACATTGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: NGVGDRGQGCSCFFFTEIRSRPG*SLTLGL Trigger: CAATCCCAATGTCAGGGACAAGCCGGGCCTGGAGCG...AATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | CTGTCTGCACCCTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTTCATCCTCTGGGATTTaGAAGGGCTCGTTCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: LSAPYMQPSILVNVKGMGSSSGI*KGSFRM Trigger: CATCCGGAACGAGCCCTTCAAAATCCCAGAGGATGA...ACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAGGGTGCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | CTCCGGGACAGCATTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGTCATCCTCTGGGATTTaGAAGGGCTCGTTCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: LRDSIHSSQSSLHAKACWSSSGI*KGSFRM Trigger: CATCCGGAACGAGCCCTTCAAAATCCCAGAGGATGA...CCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAATGCTGTCCCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | GGGTACTCATGGACAGCACAGCCAGTTCCTAGTGACCGACTCGGGGCCTTCTCATCTGTTTTGCAGGCTTaGATGAGCTGTCCCTTATTG | + |
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Preference number: 5 (lower is better) Translates to: GYSWTAQPVPSDRLGAFSSVLQA*MSCPLL Trigger: CAATAAGGGACAGCTCATCAAAGCCTGCAAAACAGA...TGAGAAGGCCCCGAGTCGGTCACTAGGAACTGGCTGTGCTGTCCATGAGTACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | ATAGAAGGGGTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCTTTGTCTTACTGCCCTCATaGGCCTCCAGACCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: IEGVHTYSSLDGFDPLIFVLLPS*ASRPST Trigger: GGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGAC...AAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCCCTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | ATGGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCTTCAGCCCCTCGCCCTaGTACAGGAAGCGGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: MELGTGVRVVLASSSQKFFSPSP*YRKRAI Trigger: AATTGCCCGCTTCCTGTACAAGGGCGAGGGGCTGAA...GAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | GGGTCCACACTTACAGCAGCCTGGATGGATTTGATCCACTCATCTTTCTCCTCCTGGAAGACCCCAGGGTaGCATAAGCAGTATCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSTLTAAWMDLIHSSFSSWKTPG*HKQYLW Trigger: CCAGAGATACTGCTTATGCAACCCTGGGGTCTTCCA...GGAGGAGAAAGATGAGTGGATCAAATCCATCCAGGCTGCTGTAAGTGTGGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | GATCCACAAAAGCATGGAGCACAGACAGGTTCAGCTCTTCCCTTTCCCCTAGGTATGCTCCACCAAGAATaGGATCCCCTGCCCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: DPQKHGAQTGSALPFPLGMLHQE*DPLPSL Trigger: CAATGAGGGCAGGGGATCCAATTCTTGGTGGAGCAT...ACCTAGGGGAAAGGGAAGAGCTGAACCTGTCTGTGCTCCATGCTTTTGTGGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
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| CDS-3UTR CAA 90 bp | CAGGGGTTTGCAAATCCAATACACACGTTCTGGAATCTTAATTCCCAGAAGGCTGTCTTACTGCCCTCATaGGCCTCCAGACCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: QGFANPIHTFWNLNSQKAVLLPS*ASRPST Trigger: GGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGAC...AGCCTTCTGGGAATTAAGATTCCAGAACGTGTGTATTGGATTTGCAAACCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | AGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGCTTCTTTCTTGCTGTCTTACTGCCCTCATaGGCCTCCAGACCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: RGQGCSCFFFTEIRFFLAVLLPS*ASRPST Trigger: GGTGGAGGGTCTGGAGGCCAATGAGGGCAGTAAGAC...AGCAAGAAAGAAGCGAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | TCACAGAAATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTCAGCCCCTCGCCCTaGTACAGGAAGCGGGCAATT | + |
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Preference number: 5 (lower is better) Translates to: SQKFASFLLPTSHRRGPHFSPSP*YRKRAI Trigger: AATTGCCCGCTTCCTGTACAAGGGCGAGGGGCTGAA...GTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTTCTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | ATGGAGTTGGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCTGGAAGACCCCAGGGTaGCATAAGCAGTATCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: MELGTGVRVVLASSSQKFWKTPG*HKQYLW Trigger: CCAGAGATACTGCTTATGCAACCCTGGGGTCTTCCA...GAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCCAACTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | GGGGACAGGGGTCAGGGTTGTTCTTGCTTCTTCTTCACAGAAATTCGCTTCTTTTCATCCTCTGGGATTTaGAAGGGCTCGTTCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: GDRGQGCSCFFFTEIRFFSSSGI*KGSFRM Trigger: CATCCGGAACGAGCCCTTCAAAATCCCAGAGGATGA...AAAGAAGCGAATTTCTGTGAAGAAGAAGCAAGAACAACCCTGACCCCTGTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | GCACATGGAGAGTATGCTGTGCCTAAATACCACACTGAGACAGTAAACTCTCTCTGGAAGACCCCAGGGTaGCATAAGCAGTATCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: AHGEYAVPKYHTETVNSLWKTPG*HKQYLW Trigger: CCAGAGATACTGCTTATGCAACCCTGGGGTCTTCCA...GAGAGAGTTTACTGTCTCAGTGTGGTATTTAGGCACAGCATACTCTCCATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | TCTTCACAGAAATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCATCATCCTCTGGGATTTaGAAGGGCTCGTTCCGGATG | + |
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Preference number: 5 (lower is better) Translates to: SSQKFASFLLPTSHRRGPSSSGI*KGSFRM Trigger: CATCCGGAACGAGCCCTTCAAAATCCCAGAGGATGA...TGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTTCTGTGAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209245.2 ENSMUST00000210853.3 |
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| CDS-3UTR CAA 90 bp | CTGTCTGCACCCTATATGCAGCCCAGCATCCTGGTAAATGTCAAGGGGATGGGTAAATTCGCTTCTTTCTaGCTGCCAACATCTCATAGA | + |
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Preference number: 5 (lower is better) Translates to: LSAPYMQPSILVNVKGMGKFASF*LPTSHR Trigger: TCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTT...ACCCATCCCCTTGACATTTACCAGGATGCTGGGCTGCATATAGGGTGCAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | GCACATGGAGAGTATGCTGTGCCTAAATACCACACTGAGACAGTAAACTCTCTCTCTGTTTTGCAGGCTTaGATGAGCTGTCCCTTATTG | + |
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Preference number: 5 (lower is better) Translates to: AHGEYAVPKYHTETVNSLSVLQA*MSCPLL Trigger: CAATAAGGGACAGCTCATCAAAGCCTGCAAAACAGA...GAGAGAGTTTACTGTCTCAGTGTGGTATTTAGGCACAGCATACTCTCCATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS-3UTR CAA 90 bp | AATTCGCTTCTTTCTTGCTGCCAACATCTCATAGAAGGGGTCCACACTTACAGCTCTGTTTTGCAGGCTTaGATGAGCTGTCCCTTATTG | + |
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Preference number: 5 (lower is better) Translates to: NSLLSCCQHLIEGVHTYSSVLQA*MSCPLL Trigger: CAATAAGGGACAGCTCATCAAAGCCTGCAAAACAGA...GCTGTAAGTGTGGACCCCTTCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210137.2 |
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| CDS-3UTR CAA 90 bp | TTCATTCTTCCCAGTCAAGCCTGCATGCTAAAGCATGCTGGGAAGAAGCAGGCAAAATTCGCTTCTTTCTaGCTGCCAACATCTCATAGA | + |
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Preference number: 5 (lower is better) Translates to: FILPSQACMLKHAGKKQAKFASF*LPTSHR Trigger: TCTATGAGATGTTGGCAGCAAGAAAGAAGCGAATTT...TGCCTGCTTCTTCCCAGCATGCTTTAGCATGCAGGCTTGACTGGGAAGAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 |
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| CDS TCA 72 bp | GCTGGGCCTGCGTCCGCGTCGGCCCGCGGGCTCGAGTaGGCCCGCTCAAACGCCCCAGGAGCCACCGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: AGPASASARGLE*ARSNAPGATAA Trigger: GGCGGCGGTGGCTCCTGGGGCGTTTGAGCGGGCTCACTCGAGCCCGCGGGCCGACGCGGACGCAGGCCCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
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| CDS CCA 72 bp | GCGCCGCCGGATGTTCTCCAACTCCATGCGCTCCTCTaGAGTCAAGTCTGGGGGCTCGTAGACACCGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: APPDVLQLHALL*SQVWGLVDTVL Trigger: GAGGACGGTGTCTACGAGCCCCCAGACTTGACTCCAGAGGAGCGCATGGAGTTGGAGAACATCCGGCGGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 ENSMUST00000209245.2 ENSMUST00000210853.3 ENSMUST00000210898.2 |
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| CDS CCA 72 bp | TCGCTCATAGCTTCACTTAGCTCTTCTCGCAGGCGCTaGATCTCCACCAGCAGCTCCTGCTTGCGCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SLIASLSSSRRR*ISTSSSCLRRR Trigger: CCGGCGGCGCAAGCAGGAGCTGCTGGTGGAGATCCAGCGCCTGCGAGAAGAGCTAAGTGAAGCTATGAGCGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 ENSMUST00000210898.2 ENSMUST00000211263.2 ENSMUST00000211783.2 |
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| CDS GCA 72 bp | AATTTCTTCCTGCCCATTGCCATCTTCCGGTTCCGCTaGAAGGTCTTACTGCCCTCATTGGCCTCCAGACCC | + |
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Preference number: 6 (lower is better) Translates to: NFFLPIAIFRFR*KVLLPSLASRP Trigger: GGGTCTGGAGGCCAATGAGGGCAGTAAGACCTTGCAGCGGAACCGGAAGATGGCAATGGGCAGGAAGAAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 ENSMUST00000211263.2 ENSMUST00000211783.2 |
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| CDS GCA 72 bp | CGGGCAATTTCCTCAGGCGTGTTCTGCAGAAGTTCATaGTCCACCAAGAATTGGATCCCCTGCCCTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: RAISSGVFCRSS*STKNWIPCPHW Trigger: CCAATGAGGGCAGGGGATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAACACGCCTGAGGAAATTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210898.2 |
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| CDS GCA 72 bp | TTGTACAGGAAGCGGGCAATTTCCTCAGGCGTGTTCTaGAGAAGTTCATGCTCCACCAAGAATTGGATCCCC | + |
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Preference number: 6 (lower is better) Translates to: LYRKRAISSGVF*RSSCSTKNWIP Trigger: GGGGATCCAATTCTTGGTGGAGCATGAACTTCTGCAGAACACGCCTGAGGAAATTGCCCGCTTCCTGTACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000056820.13 ENSMUST00000107729.10 ENSMUST00000209245.2 ENSMUST00000210137.2 ENSMUST00000210853.3 ENSMUST00000210898.2 ENSMUST00000211263.2 ENSMUST00000211783.2 |
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