Pregenerated sensors for CYSTM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046727Ensembl transcript IDs: ENSMUST00000050584.10, ENSMUST00000139727.3, ENSMUST00000152804.9, ENSMUST00000235403.2, ENSMUST00000235576.2, ENSMUST00000235864.2, ENSMUST00000236024.2, ENSMUST00000236374.2, ENSMUST00000236593.2, ENSMUST00000237329.2, ENSMUST00000237375.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCACACTTATCGGAGGTaGCACAGAGCGGCCAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: RWGQAHLSEVAQSGQAEEHTYRR*HRAAKR Trigger: CCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTG...CTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGACACACTTATCGGAGGTaGCACAGAGCGGCCAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: EMGPGTLIGGGTERPSGRHTYRR*HRAAKR Trigger: CCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTG...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGTGTGTGAGGCAGGTGGATaGGCCCAGGTCGTCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: EVAQSGQAEELGSSGDQVCEAGG*AQVVSS Trigger: AGAAGAGACGACCTGGGCCCATCCACCTGCCTCACA...CACCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR-3UTR CCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAAGCTGTCAGTCTTCTTaGCCCCAGCCTGGTAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: EMGPGTLIGGGTERPSGRSCQSS*PQPGRE Trigger: CTCTCTACCAGGCTGGGGCCAAGAAGACTGACAGCT...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGGCCATCCTTCCAACTTaGACCAGCTGTCAGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RRWHRAAKRKSWAHQVIRAILPT*TSCQSS Trigger: AGAAGACTGACAGCTGGTTCAAGTTGGAAGGATGGC...CCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCCATCCTTCCAACTTaGACCAGCTGTCAGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: EMGPGTLIGGGTERPSGRAILPT*TSCQSS Trigger: AGAAGACTGACAGCTGGTTCAAGTTGGAAGGATGGC...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCGAAAGTAGAGGTGTCTaGGCAGAGCTAGCCACTTTA | + |
|
Preference number: 2 (lower is better) Translates to: DGARHTYRRWHRAAKRKSESRGV*AELATL Trigger: TAAAGTGGCTAGCTCTGCGCAGACACCTCTACTTTC...GCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR GCA 90 bp | AGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGGAAAGTAGAGGTGTCTaGGCAGAGCTAGCCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: RWGQAHLSEVAQSGQAEEESRGV*AELATL Trigger: TAAAGTGGCTAGCTCTGCGCAGACACCTCTACTTTC...CTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGTGAGGTCGTCTCTTCTTTaGTCTTCCACCACATACATG | + |
|
Preference number: 2 (lower is better) Translates to: EVAQSGQAEELGSSGDQVRSSLL*SSTTYM Trigger: CATGTATGTGGTGGAAGACCAAAGAAGAGACGACCT...CACCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACATACACACTTATCGGAGGTaGCACAGAGCGGCCAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: DLLKHKGYEQRDLVVCHIHTYRR*HRAAKR Trigger: CCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTG...TATGTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACGAATACAGCAGAGTCTaGGAGGTACAGAAGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: TDLLKHKGYEQRDLVVCHEYSRV*EVQKHS Trigger: GCTGTGCTTCTGTACCTCCCAGACTCTGCTGTATTC...GTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000235403.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR GCA 90 bp | GATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACATAGAAAGTAGAGGTGTCTaGGCAGAGCTAGCCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: DLLKHKGYEQRDLVVCHIESRGV*AELATL Trigger: TAAAGTGGCTAGCTCTGCGCAGACACCTCTACTTTC...TATGTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR CAA 90 bp | CGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGGCTTTGCCTCTTTTGTaGAAGCCATCCTTCCAACTT | + |
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Preference number: 3 (lower is better) Translates to: RRWHRAAKRKSWAHQVIRALPLL*KPSFQL Trigger: AAGTTGGAAGGATGGCTTCAACAAAAGAGGCAAAGC...CCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR-3UTR CAA 90 bp | GATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCCACCACATACATGCTTaGCCTCTTTTGTTGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: DGARHTYRRWHRAAKRKSHHIHA*PLLLKP Trigger: TGGCTTCAACAAAAGAGGCAAAGCATGTATGTGGTG...GCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR TCA 72 bp | TGCTTTGCCTCTTTTGTTGAAGCCATCCTTCCAACTTaGACCAGCTGTCAGTCTTCTTGGCCCCAGCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: CFASFVEAILPT*TSCQSSWPQPG Trigger: ACCAGGCTGGGGCCAAGAAGACTGACAGCTGGTTCAAGTTGGAAGGATGGCTTCAACAAAAGAGGCAAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR CCA 72 bp | ATGCTGACCTGCTCACATCTTACGAGCCTTGGTGGATaGAATACAGCAGAGTCTGGGAGGTACAGAAGCACA | + |
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Preference number: 3 (lower is better) Translates to: MLTCSHLTSLGG*NTAESGRYRST Trigger: TGTGCTTCTGTACCTCCCAGACTCTGCTGTATTCCATCCACCAAGGCTCGTAAGATGTGAGCAGGTCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000235403.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACCACCACATACATGCTTaGCCTCTTTTGTTGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TDLLKHKGYEQRDLVVCHHHIHA*PLLLKP Trigger: TGGCTTCAACAAAAGAGGCAAAGCATGTATGTGGTG...GTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235576.2 |
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| CDS-3UTR TCA 90 bp | TGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGTCTTAGGAGGCTCCTaGGGTCCACCCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: WGQAHLSEVAQSGQAEELVLGGS*GPPCQP Trigger: CGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAGAC...CAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GARHTYRRWHRAAKRKSWVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...CCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR TCA 90 bp | GAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGTGGTCTTAGGAGGCTCCTaGGGTCCACCCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: EVAQSGQAEELGSSGDQVVLGGS*GPPCQP Trigger: CGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAGAC...CACCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: EMGPGTLIGGGTERPSGRVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGTGGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: EVAQSGQAEELGSSGDQVVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...CACCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CCA 90 bp | ACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TYRRWHRAAKRKSWAHQVVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...CACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGTGTGAGGCAGGTGGATaGGCCCAGGTCGTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: WGQAHLSEVAQSGQAEELCEAGG*AQVVSS Trigger: AGAAGAGACGACCTGGGCCCATCCACCTGCCTCACA...CAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCCCCCATTGGCCCCATTaGCTGTTGTGGATAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: DGARHTYRRWHRAAKRKSPHWPH*LLWIRW Trigger: CCACCTTATCCACAACAGCCAATGGGGCCAATGGGG...GCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GARHTYRRWHRAAKRKSWLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...CCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGATGTGAGGCAGGTGGATaGGCCCAGGTCGTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: EMGPGTLIGGGTERPSGRCEAGG*AQVVSS Trigger: AGAAGAGACGACCTGGGCCCATCCACCTGCCTCACA...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGACCCCATTGGCCCCATTaGCTGTTGTGGATAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: EMGPGTLIGGGTERPSGRPHWPH*LLWIRW Trigger: CCACCTTATCCACAACAGCCAATGGGGCCAATGGGG...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | AGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCCCCATTGGCCCCATTaGCTGTTGTGGATAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RWGQAHLSEVAQSGQAEEPHWPH*LLWIRW Trigger: CCACCTTATCCACAACAGCCAATGGGGCCAATGGGG...CTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | TGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: WGQAHLSEVAQSGQAEELLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...CAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | ACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGTGTGAGGCAGGTGGATaGGCCCAGGTCGTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TYRRWHRAAKRKSWAHQVCEAGG*AQVVSS Trigger: AGAAGAGACGACCTGGGCCCATCCACCTGCCTCACA...CACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | CCATCCTTCCAACTTGAACCAGCTGTCAGTCTTCTTGGCCCCAGCCTGGTAGAGGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: PSFQLEPAVSLLGPSLVEVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...CTCTACCAGGCTGGGGCCAAGAAGACTGACAGCTGGTTCAAGTTGGAAGGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CCA 90 bp | GAGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGACTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: EMGPGTLIGGGTERPSGRLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...TCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | AGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: RWGQAHLSEVAQSGQAEELPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...CTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | GAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGTGCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: EVAQSGQAEELGSSGDQVLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...CACCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR TCA 90 bp | AGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCTAGTCTTAGGAGGCTCCTaGGGTCCACCCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SCLFSNRSSGCERTGSWLVLGGS*GPPCQP Trigger: CGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAGAC...TAGCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR TCA 90 bp | ACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGGTCTTAGGAGGCTCCTaGGGTCCACCCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TSCLFSNRSSGCERTGSWVLGGS*GPPCQP Trigger: CGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAGAC...CCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCTACGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VVYSATGAAAARELGLGYVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...GTAGCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | ACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TSCLFSNRSSGCERTGSWVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...CCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | ACACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TLVVYSATGAAAARELGLVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...AAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | GTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCTACCCCCATTGGCCCCATTaGCTGTTGTGGATAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VVYSATGAAAARELGLGYPHWPH*LLWIRW Trigger: CCACCTTATCCACAACAGCCAATGGGGCCAATGGGG...GTAGCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | CTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LVVYSATGAAAARELGLGLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...GCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | AGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCTACTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SCLFSNRSSGCERTGSWLLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...TAGCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | ACACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: TLVVYSATGAAAARELGLLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...AAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CCA 90 bp | GCTTTGCCTCTTTTGTTGAAGCCATCCTTCCAACTTGAACCAGCTGTCAGTCTTCCCCATTGGCCCCATTaGCTGTTGTGGATAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ALPLLLKPSFQLEPAVSLPHWPH*LLWIRW Trigger: CCACCTTATCCACAACAGCCAATGGGGCCAATGGGG...AAGACTGACAGCTGGTTCAAGTTGGAAGGATGGCTTCAACAAAAGAGGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR TCA 90 bp | ACAGATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACGTCTTAGGAGGCTCCTaGGGTCCACCCTGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TDLLKHKGYEQRDLVVCHVLGGS*GPPCQP Trigger: CGGCTGGCAGGGTGGACCTCAGGAGCCTCCTAAGAC...GTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | ACAGATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACGTACCCCTGAGGAGGTaGGGCTCCCATAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: TDLLKHKGYEQRDLVVCHVPLRR*GSHRPH Trigger: ATGGGGCCTATGGGAGCCCCACCTCCTCAGGGGTAC...GTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| CDS-3UTR CCA 90 bp | TCTTTGGTCTTCCACCACATACATGCTTTGCCTCTTTTGTTGAAGCCATCCTTCCTGCCAGCCGTACTGTaGGTATCCTTGATAGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: SLVFHHIHALPLLLKPSFLPAVL*VSLIGV Trigger: TACCCCTATCAAGGATACCCACAGTACGGCTGGCAG...GAAGGATGGCTTCAACAAAAGAGGCAAAGCATGTATGTGGTGGAAGACCAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CCA 90 bp | ACAGATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACTGTGAGGCAGGTGGATaGGCCCAGGTCGTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TDLLKHKGYEQRDLVVCHCEAGG*AQVVSS Trigger: AGAAGAGACGACCTGGGCCCATCCACCTGCCTCACA...GTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| 3UTR CAA 72 bp | TTGGTCTTCCACCACATACATGCTTTGCCTCTTTTGTaGAAGCCATCCTTCCAACTTGAACCAGCTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: LVFHHIHALPLL*KPSFQLEPAVS Trigger: ACTGACAGCTGGTTCAAGTTGGAAGGATGGCTTCAACAAAAGAGGCAAAGCATGTATGTGGTGGAAGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| 3UTR CAA 72 bp | TCTTTGGTCTTCCACCACATACATGCTTTGCCTCTTTaGTTGAAGCCATCCTTCCAACTTGAACCAGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLVFHHIHALPL*LKPSFQLEPAV Trigger: GACAGCTGGTTCAAGTTGGAAGGATGGCTTCAACAAAAGAGGCAAAGCATGTATGTGGTGGAAGACCAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS GCA 90 bp | CAGGAGGCAGCAACAGCAGAGCGCAGCCCAGCACGCGGCCAGGACTaGCTGACACCCGGCATCCGTGTTCGTCTTCCTTTCCCGTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QEAATAERSPARGQD*LTPGIRVRLPFPFQ Trigger: TTGGAACGGGAAAGGAAGACGAACACGGATGCCGGGTGTCAGGCAGTCCTGGCCGCGTGCTGGGCTGCGCTCTGCTGTTGCTGCCTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CAA 90 bp | GATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCGCCCCATTGGCCCCATaGGCTGTTGTGGATAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: DGARHTYRRWHRAAKRKSAPLAP*AVVDKV Trigger: CACCTTATCCACAACAGCCAATGGGGCCAATGGGGC...GCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CAA 90 bp | GGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GARHTYRRWHRAAKRKSWVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...CCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CAA 90 bp | AGATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGGCCCCATTGGCCCCATaGGCTGTTGTGGATAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: RWGQAHLSEVAQSGQAEEAPLAP*AVVDKV Trigger: CACCTTATCCACAACAGCCAATGGGGCCAATGGGGC...CTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CAA 90 bp | GATGGGGCCAGGCACACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: DGARHTYRRWHRAAKRKSVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...GCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGTGTGCCTGGCCCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CAA 90 bp | ACTTATCGGAGGTGGCACAGAGCGGCCAAGCGGAAGAGCTGGGCTCATCAGGTGGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TYRRWHRAAKRKSWAHQVVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...CACCTGATGAGCCCAGCTCTTCCGCTTGGCCGCTCTGTGCCACCTCCGATAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236024.2 ENSMUST00000236374.2 ENSMUST00000237329.2 ENSMUST00000237375.2 |
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| CDS-3UTR CAA 90 bp | GGCCAAGCGGAAGAGCTGGGCTCATCAGGTGATCAGGTGAGCATGTCCCAGAGGGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GQAEELGSSGDQVSMSQRVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...CCTCTGGGACATGCTCACCTGATCACCTGATGAGCCCAGCTCTTCCGCTTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CAA 90 bp | AGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCTAGCCCCATTGGCCCCATaGGCTGTTGTGGATAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SCLFSNRSSGCERTGSWLAPLAP*AVVDKV Trigger: CACCTTATCCACAACAGCCAATGGGGCCAATGGGGC...TAGCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CAA 90 bp | CTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGCGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: LVVYSATGAAAARELGLGVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...GCCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CAA 90 bp | ACACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGCCCCATTGGCCCCATaGGCTGTTGTGGATAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: TLVVYSATGAAAARELGLAPLAP*AVVDKV Trigger: CACCTTATCCACAACAGCCAATGGGGCCAATGGGGC...AAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CAA 90 bp | ACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTTGGGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TSCLFSNRSSGCERTGSWVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...CCAAGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CAA 90 bp | AACACTAGTTGTTTATTCAGCAACAGGAGCAGCGGCTGCGAGAGAACTGGGTCTGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: NTSCLFSNRSSGCERTGSVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...AGACCCAGTTCTCTCGCAGCCGCTGCTCCTGTTGCTGAATAAACAACTAGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000139727.3 ENSMUST00000152804.9 ENSMUST00000236593.2 |
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| CDS-3UTR CAA 90 bp | GCTTTGCCTCTTTTGTTGAAGCCATCCTTCCAACTTGAACCAGCTGTCAGTCTTGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: ALPLLLKPSFQLEPAVSLVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...AAGACTGACAGCTGGTTCAAGTTGGAAGGATGGCTTCAACAAAAGAGGCAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CAA 90 bp | TCTTTGGTCTTCCACCACATACATGCTTTGCCTCTTTTGTTGAAGCCATCCTTCGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: SLVFHHIHALPLLLKPSFVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...GAAGGATGGCTTCAACAAAAGAGGCAAAGCATGTATGTGGTGGAAGACCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000235576.2 ENSMUST00000236024.2 ENSMUST00000237329.2 |
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| CDS-3UTR CAA 90 bp | ACAGATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACGCCCCATTGGCCCCATaGGCTGTTGTGGATAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: TDLLKHKGYEQRDLVVCHAPLAP*AVVDKV Trigger: CACCTTATCCACAACAGCCAATGGGGCCAATGGGGC...GTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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| CDS-3UTR CAA 90 bp | GATTTATTGAAACATAAAGGGTATGAGCAGAGAGATCTAGTAGTGTGTCACATAGTACTGTGGGTATCCTaGATAGGGGTACCCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: DLLKHKGYEQRDLVVCHIVLWVS*IGVPLR Trigger: CCTCAGGGGTACCCCTATCAAGGATACCCACAGTAC...TATGTGACACACTACTAGATCTCTCTGCTCATACCCTTTATGTTTCAATAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000050584.10 ENSMUST00000235403.2 ENSMUST00000235576.2 ENSMUST00000235864.2 ENSMUST00000236374.2 ENSMUST00000237375.2 |
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