Pregenerated sensors for CYSLTR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033470Ensembl transcript IDs: ENSMUST00000044664.12, ENSMUST00000169168.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | ATGTTGTGGTCAATTAAATGTCAGGAACCAACTTGTTaGTTAGGATGCAAATATAAAGTAAGTTGGAGACTC | + |
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Preference number: 3 (lower is better) Translates to: MLWSIKCQEPTC*LGCKYKVSWRL Trigger: GAGTCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTGGTTCCTGACATTTAATTGACCACAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGGGAAGGGGTGGACTGTaGCCAGGAAACGCACCACAC | + |
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Preference number: 4 (lower is better) Translates to: QLLILLILFFSYSQTGRLGRGGL*PGNAPH Trigger: GTGTGGTGCGTTTCCTGGCCACAGTCCACCCCTTCC...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGGAAGGGGTGGACTGTaGCCAGGAAACGCACCACAC | + |
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Preference number: 4 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKGRGGL*PGNAPH Trigger: GTGTGGTGCGTTTCCTGGCCACAGTCCACCCCTTCC...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGAACATCCGGAAGGGGTaGACTGTGGCCAGGAAACGC | + |
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Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGRNIRKG*TVARKR Trigger: GCGTTTCCTGGCCACAGTCCACCCCTTCCGGATGTT...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGCACCAGAAGCAGGGCTaGGGAAGCCATGATGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: QLLILLILFFSYSQTGRLHQKQG*GSHDEN Trigger: GTTTTCATCATGGCTTCCTCAGCCCTGCTTCTGGTG...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCACCAGAAGCAGGGCTaGGGAAGCCATGATGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGRHQKQG*GSHDEN Trigger: GTTTTCATCATGGCTTCCTCAGCCCTGCTTCTGGTG...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGAATCTTTATCCCATGTaGCCAAGTGGAGGGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLLILLILFFSYSQTGRLNLYPM*PSGGSA Trigger: TGCGGACCCTCCACTTGGTCACATGGGATAAAGATT...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGAATCTTTATCCCATGTaGCCAAGTGGAGGGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGRNLYPM*PSGGSA Trigger: TGCGGACCCTCCACTTGGTCACATGGGATAAAGATT...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR GCA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGGAAGCCTACCGCTACTaGAATGTGGTTCATGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLILLILFFSYSQTGRLEAYRY*NVVHDQ Trigger: CTGATCATGAACCACATTGCAGTAGCGGTAGGCTTC...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR GCA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGTGGAGGGTCCGCAGTaGATGGTATGGCAGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKVEGPQ*MVWQKT Trigger: TGTTTTCTGCCATACCATGCACTGCGGACCCTCCAC...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCCGCAGTGCATGGTATaGCAGAAAACAGAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGRPQCMV*QKTEEE Trigger: TTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGG...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGATAAGGAATAAGACATaGCTCTGCAGGCCAAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGRIRNKT*LCRPSP Trigger: GGGACTTGGCCTGCAGAGTCATGTCTTATTCCTTAT...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR GCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGGAAGCCTACCGCTACTaGAATGTGGTTCATGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGREAYRY*NVVHDQ Trigger: CTGATCATGAACCACATTGCAGTAGCGGTAGGCTTC...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGATAAGGAATAAGACATaGCTCTGCAGGCCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKIRNKT*LCRPSP Trigger: GGGACTTGGCCTGCAGAGTCATGTCTTATTCCTTAT...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | AAATGTCAGGAACCAACTTGTTGGTTAGGATGCAAATATAAAGTAAGTTGGAGAAGGGTCCGCAGTGCATaGTATGGCAGAAAACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCQEPTCWLGCKYKVSWRRVRSA*YGRKQR Trigger: CCTCTGTTTTCTGCCATACCATGCACTGCGGACCCT...TCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTGGTTCCTGACATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR GCA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGCAGATGTGGACTTCTTaGAAGTCTGTAGAAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QLLILLILFFSYSQTGRLQMWTS*KSVERH Trigger: ATGTCTTTCTACAGACTTGCAAGAAGTCCACATCTG...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | AAATGTCAGGAACCAACTTGTTGGTTAGGATGCAAATATAAAGTAAGTTGGAGACCGCAGTGCATGGTATaGCAGAAAACAGAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCQEPTCWLGCKYKVSWRPQCMV*QKTEEE Trigger: TTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGG...TCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTGGTTCCTGACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR TCA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGAGACTTTTAAACTTTTaGGGACTCAGCTCCAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: EQLLILLILFFSYSQTGRRLLNF*GLSSKH Trigger: ATGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCT...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR GCA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGCAGATGTGGACTTCTTaGAAGTCTGTAGAAAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKQMWTS*KSVERH Trigger: ATGTCTTTCTACAGACTTGCAAGAAGTCCACATCTG...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGTAGAAAGACATATATaGAAAAGCCATTTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKVERHI*KSHFPR Trigger: CCTTGGGAAATGGCTTTTCCATATATGTCTTTCTAC...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | AAATGTCAGGAACCAACTTGTTGGTTAGGATGCAAATATAAAGTAAGTTGGAGAGTAGAAAGACATATATaGAAAAGCCATTTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCQEPTCWLGCKYKVSWRVERHI*KSHFPR Trigger: CCTTGGGAAATGGCTTTTCCATATATGTCTTTCTAC...TCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTGGTTCCTGACATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CCA 90 bp | AAATGTCAGGAACCAACTTGTTGGTTAGGATGCAAATATAAAGTAAGTTGGAGAAAACATTTACAGATGTaGACTTCTTGCAAGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: KCQEPTCWLGCKYKVSWRKHLQM*TSCKSV Trigger: TACAGACTTGCAAGAAGTCCACATCTGTAAATGTTT...TCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTGGTTCCTGACATTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 90 bp | CATATGATCCCACAGAGGATCCAGGCACTCCTGACACTGGTGACATaGAACATCCGGAAGGGGTGGACTGTGGCCAGGAAACGCACCACA | + |
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Preference number: 5 (lower is better) Translates to: HMIPQRIQALLTLVT*NIRKGWTVARKRTT Trigger: TGTGGTGCGTTTCCTGGCCACAGTCCACCCCTTCCGGATGTTCCATGTCACCAGTGTCAGGAGTGCCTGGATCCTCTGTGGGATCATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 90 bp | ATCCAGGCACTCCTGACACTGGTGACATGGAACATCCGGAAGGGGTaGACTGTGGCCAGGAAACGCACCACACTCAGCACAGTTAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: IQALLTLVTWNIRKG*TVARKRTTLSTVRK Trigger: TTTCCTAACTGTGCTGAGTGTGGTGCGTTTCCTGGCCACAGTCCACCCCTTCCGGATGTTCCATGTCACCAGTGTCAGGAGTGCCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 90 bp | CAAGATCCGGATGATCAGCAGGTAGCAGACGGTGAGCGTGAGAAATaGGAGCAAGAAGCCTACCGCTACTGCAATGTGGTTCATGATCAG | + |
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Preference number: 5 (lower is better) Translates to: QDPDDQQVADGEREK*EQEAYRYCNVVHDQ Trigger: CTGATCATGAACCACATTGCAGTAGCGGTAGGCTTCTTGCTCCCATTTCTCACGCTCACCGTCTGCTACCTGCTGATCATCCGGATCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 90 bp | AGGAAGGTGATCATGGCAATGACAATGGTGGTCAGCGCCTTCCTATaGGCAGCACGTGGACCTGATTCTGGAATCTCAGCCTTTAACAAG | + |
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Preference number: 5 (lower is better) Translates to: RKVIMAMTMVVSAFL*AARGPDSGISAFNK Trigger: CTTGTTAAAGGCTGAGATTCCAGAATCAGGTCCACGTGCTGCTCATAGGAAGGCGCTGACCACCATTGTCATTGCCATGATCACCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 90 bp | ATCTTTATCCCATGTGACCAAGTGGAGGGTCCGCAGTGCATGGTATaGCAGAAAACAGAGGAGGAAGGTGATCATGGCAATGACAATGGT | + |
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Preference number: 5 (lower is better) Translates to: IFIPCDQVEGPQCMV*QKTEEEGDHGNDNG Trigger: ACCATTGTCATTGCCATGATCACCTTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGGACCCTCCACTTGGTCACATGGGATAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 90 bp | CATGAATCTTTATCCCATGTGACCAAGTGGAGGGTCCGCAGTGCATaGTATGGCAGAAAACAGAGGAGGAAGGTGATCATGGCAATGACA | + |
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Preference number: 5 (lower is better) Translates to: HESLSHVTKWRVRSA*YGRKQRRKVIMAMT Trigger: TGTCATTGCCATGATCACCTTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGGACCCTCCACTTGGTCACATGGGATAAAGATTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS GCA 90 bp | GCAGACGGTGAGCGTGAGAAATGGGAGCAAGAAGCCTACCGCTACTaGAATGTGGTTCATGATCAGGAGACTTTTAAACTTTTGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: ADGEREKWEQEAYRY*NVVHDQETFKLLRT Trigger: AGTCCTCAAAAGTTTAAAAGTCTCCTGATCATGAACCACATTGCAGTAGCGGTAGGCTTCTTGCTCCCATTTCTCACGCTCACCGTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 90 bp | TATAATGTTATCTTTCTCCTCTTGGCCGTTCACCAGAAGCAGGGCTaGGGAAGCCATGATGAAAACCCATATGATCCCACAGAGGATCCA | + |
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Preference number: 5 (lower is better) Translates to: YNVIFLLLAVHQKQG*GSHDENPYDPTEDP Trigger: TGGATCCTCTGTGGGATCATATGGGTTTTCATCATGGCTTCCTCAGCCCTGCTTCTGGTGAACGGCCAAGAGGAGAAAGATAACATTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGGGATTGAAGCAGCTATaGGCTGCAGCCATGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: QLLILLILFFSYSQTGRLGLKQL*AAAMVS Trigger: ACTGACCATGGCTGCAGCCAATAGCTGCTTCAATCC...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGGATTGAAGCAGCTATaGGCTGCAGCCATGGTCAGT | + |
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Preference number: 5 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKGLKQL*AAAMVS Trigger: ACTGACCATGGCTGCAGCCAATAGCTGCTTCAATCC...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 90 bp | CATGATCAGGAGACTTTTAAACTTTTGAGGACTCAGCTCCAAGCATaGTATAATGTTATCTTTCTCCTCTTGGCCGTTCACCAGAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: HDQETFKLLRTQLQA*YNVIFLLLAVHQKQ Trigger: CTGCTTCTGGTGAACGGCCAAGAGGAGAAAGATAACATTATATCATGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCTCCTGATCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | CAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCTGACAGATGTGGACTTCTaGCAAGTCTGTAGAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: QLLILLILFFSYSQTGRLTDVDF*QVCRKT Trigger: TGTCTTTCTACAGACTTGCAAGAAGTCCACATCTGT...CAGCCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGTCGGAAGTGGCCAGGTaGAGCATGAAAACATTTACA | + |
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Preference number: 5 (lower is better) Translates to: EQLLILLILFFSYSQTGRSEVAR*SMKTFT Trigger: TGTAAATGTTTTCATGCTCAACCTGGCCACTTCCGA...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGGCCCTTAATCGAGCTTaGAAATTCTCCCCAGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: EQLLILLILFFSYSQTGRALNRA*KFSPAK Trigger: TTTTGCTGGGGAGAATTTCAAAGCTCGATTAAGGGC...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | GAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGACAGATGTGGACTTCTaGCAAGTCTGTAGAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: EQLLILLILFFSYSQTGRTDVDF*QVCRKT Trigger: TGTCTTTCTACAGACTTGCAAGAAGTCCACATCTGT...CCTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGTCGGAAGTGGCCAGGTaGAGCATGAAAACATTTACA | + |
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Preference number: 5 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKSEVAR*SMKTFT Trigger: TGTAAATGTTTTCATGCTCAACCTGGCCACTTCCGA...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | AGAACAGCTCCTTATACTCTTAATTCTGTTCTTCAGCTACTCACAAACAGGAAGGCCCTTAATCGAGCTTaGAAATTCTCCCCAGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RTAPYTLNSVLQLLTNRKALNRA*KFSPAK Trigger: TTTTGCTGGGGAGAATTTCAAAGCTCGATTAAGGGC...CTTCCTGTTTGTGAGTAGCTGAAGAACAGAATTAAGAGTATAAGGAGCTGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 90 bp | ACCGCTACTGCAATGTGGTTCATGATCAGGAGACTTTTAAACTTTTaGGGACTCAGCTCCAAGCATGATATAATGTTATCTTTCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: TATAMWFMIRRLLNF*GLSSKHDIMLSFSS Trigger: AGAGGAGAAAGATAACATTATATCATGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCTCCTGATCATGAACCACATTGCAGTAGCGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS-3UTR CAA 90 bp | AAATGTCAGGAACCAACTTGTTGGTTAGGATGCAAATATAAAGTAAGTTGGAGAGAGACTTTTAAACTTTaGAGGACTCAGCTCCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: KCQEPTCWLGCKYKVSWRETFKL*RTQLQA Trigger: TGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCTC...TCTCCAACTTACTTTATATTTGCATCCTAACCAACAAGTTGGTTCCTGACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 72 bp | CCACAGAGGATCCAGGCACTCCTGACACTGGTGACATaGAACATCCGGAAGGGGTGGACTGTGGCCAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PQRIQALLTLVT*NIRKGWTVARK Trigger: TTTCCTGGCCACAGTCCACCCCTTCCGGATGTTCCATGTCACCAGTGTCAGGAGTGCCTGGATCCTCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 72 bp | ATCATGGCAATGACAATGGTGGTCAGCGCCTTCCTATaGGCAGCACGTGGACCTGATTCTGGAATCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IMAMTMVVSAFL*AARGPDSGISA Trigger: GGCTGAGATTCCAGAATCAGGTCCACGTGCTGCTCATAGGAAGGCGCTGACCACCATTGTCATTGCCATGAT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 72 bp | GATGATCAGCAGGTAGCAGACGGTGAGCGTGAGAAATaGGAGCAAGAAGCCTACCGCTACTGCAATGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: DDQQVADGEREK*EQEAYRYCNVV Trigger: AACCACATTGCAGTAGCGGTAGGCTTCTTGCTCCCATTTCTCACGCTCACCGTCTGCTACCTGCTGATCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 72 bp | CCATGTGACCAAGTGGAGGGTCCGCAGTGCATGGTATaGCAGAAAACAGAGGAGGAAGGTGATCATGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: PCDQVEGPQCMV*QKTEEEGDHGN Trigger: ATTGCCATGATCACCTTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGGACCCTCCACTTGGTCACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CCA 72 bp | TTATCCCATGTGACCAAGTGGAGGGTCCGCAGTGCATaGTATGGCAGAAAACAGAGGAGGAAGGTGATCATG | + |
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Preference number: 6 (lower is better) Translates to: LSHVTKWRVRSA*YGRKQRRKVIM Trigger: CATGATCACCTTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGGACCCTCCACTTGGTCACATGGGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 72 bp | ATCTTTCTCCTCTTGGCCGTTCACCAGAAGCAGGGCTaGGGAAGCCATGATGAAAACCCATATGATCCCACA | + |
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Preference number: 6 (lower is better) Translates to: IFLLLAVHQKQG*GSHDENPYDPT Trigger: TGTGGGATCATATGGGTTTTCATCATGGCTTCCTCAGCCCTGCTTCTGGTGAACGGCCAAGAGGAGAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 72 bp | TATGTAGCACATCCCCACATGAATCTTTATCCCATGTaGCCAAGTGGAGGGTCCGCAGTGCATGGTATGGCA | + |
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Preference number: 6 (lower is better) Translates to: YVAHPHMNLYPM*PSGGSAVHGMA Trigger: TGCCATACCATGCACTGCGGACCCTCCACTTGGTCACATGGGATAAAGATTCATGTGGGGATGTGCTACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS GCA 72 bp | ATCTTTATCCCATGTGACCAAGTGGAGGGTCCGCAGTaGATGGTATGGCAGAAAACAGAGGAGGAAGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: IFIPCDQVEGPQ*MVWQKTEEEGD Trigger: ATCACCTTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGGACCCTCCACTTGGTCACATGGGATAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CAA 90 bp | CTGAAGGGCAAGGTGCTGATGAATAGAAAATCGGAAGTGGCCAGGTaGAGCATGAAAACATTTACAGATGTGGACTTCTTGCAAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LKGKVLMNRKSEVAR*SMKTFTDVDFLQVC Trigger: ACAGACTTGCAAGAAGTCCACATCTGTAAATGTTTTCATGCTCAACCTGGCCACTTCCGATTTTCTATTCATCAGCACCTTGCCCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CAA 72 bp | AAGGTGCTGATGAATAGAAAATCGGAAGTGGCCAGGTaGAGCATGAAAACATTTACAGATGTGGACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KVLMNRKSEVAR*SMKTFTDVDFL Trigger: CAAGAAGTCCACATCTGTAAATGTTTTCATGCTCAACCTGGCCACTTCCGATTTTCTATTCATCAGCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS CAA 90 bp | GAAGTGGCCAGGTTGAGCATGAAAACATTTACAGATGTGGACTTCTaGCAAGTCTGTAGAAAGACATATATGGAAAAGCCATTTCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: EVARLSMKTFTDVDF*QVCRKTYMEKPFPK Trigger: CTTGGGAAATGGCTTTTCCATATATGTCTTTCTACAGACTTGCAAGAAGTCCACATCTGTAAATGTTTTCATGCTCAACCTGGCCACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 72 bp | GAGACTTTTAAACTTTTGAGGACTCAGCTCCAAGCATaGTATAATGTTATCTTTCTCCTCTTGGCCGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ETFKLLRTQLQA*YNVIFLLLAVH Trigger: GTGAACGGCCAAGAGGAGAAAGATAACATTATATCATGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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| CDS TCA 72 bp | GCAATGTGGTTCATGATCAGGAGACTTTTAAACTTTTaGGGACTCAGCTCCAAGCATGATATAATGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: AMWFMIRRLLNF*GLSSKHDIMLS Trigger: AGATAACATTATATCATGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCTCCTGATCATGAACCACATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044664.12 ENSMUST00000169168.3 |
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