Pregenerated sensors for CYS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062563Ensembl transcript IDs: ENSMUST00000074163.13, ENSMUST00000156453.10, ENSMUST00000163514.9, ENSMUST00000172771.2, ENSMUST00000173145.8, ENSMUST00000186602.7, ENSMUST00000189849.7
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTTCCCAGCCCTCTTTCTTCCTGCTACATCCAAGCAGGGGAGGCTaGTACACTGTGGCTTGGAGGAGCCCCCAGCACACAGAAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: GSQPSFFLLHPSRGG*YTVAWRSPQHTEGR Trigger: TCTCCCTTCTGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGAGGGCTGGGAACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | CAGGCTACCCCTCAGAGTAAGAGGGGGTACACACACACACATGTGTaGCCTGGCACCTACTCTTGGTCTGCCAGGCCATTGGCAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: QATPQSKRGYTHTHV*PGTYSWSARPLAGL Trigger: GAGTCCTGCCAATGGCCTGGCAGACCAAGAGTAGGTGCCAGGCCACACATGTGTGTGTGTGTACCCCCTCTTACTCTGAGGGGTAGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | TTCTTCCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTaGAGGAGCCCCCAGCACACAGAAGGGAGAAGCCAAGGGACTCAG | + |
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Preference number: 1 (lower is better) Translates to: FFLLHPSRGGCYTVA*RSPQHTEGRSQGTQ Trigger: CTGAGTCCCTTGGCTTCTCCCTTCTGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | CCTCTTTCTTCCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTaGCTTGGAGGAGCCCCCAGCACACAGAAGGGAGAAGCCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: PLSSCYIQAGEAATL*LGGAPSTQKGEAKG Trigger: TCCCTTGGCTTCTCCCTTCTGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR GCA 90 bp | ACCGGGATGCCAAAGAAGTCTGTGGTTCCCAGCCCTCTTTCTTCCTaGTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: TGMPKKSVVPSPLSS*YIQAGEAATLWLGG Trigger: TCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGAGGGCTGGGAACCACAGACTTCTTTGGCATCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | ATGCTGATGAAGGCCACTGTCTTGGTGGAAACTTCTAGAAGCCTGTaGCACAGATGCCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: MLMKATVLVETSRSL*HRCQEGLTLPHLQG Trigger: GCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGACAGTGGCCTTCATCAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
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| 3UTR GCA 90 bp | GGGGTACACACACACACATGTGTGGCCTGGCACCTACTCTTGGTCTaGCAGGCCATTGGCAGGACTCCGACTGTGACTCTTAAAAGATCA | + |
|
Preference number: 1 (lower is better) Translates to: GVHTHTCVAWHLLLV*QAIGRTPTVTLKRS Trigger: TGATCTTTTAAGAGTCACAGTCGGAGTCCTGCCAATGGCCTGGCAGACCAAGAGTAGGTGCCAGGCCACACATGTGTGTGTGTGTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | CTTCCTTGGTTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATaGACTGGCAGCTGTTCTCAGGAGAGGGAAGATGCTGATGAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: LPWFLRYSRLCSEDS*TGSCSQEREDADEG Trigger: GCCTTCATCAGCATCTTCCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAACCAAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| 3UTR TCA 90 bp | GACCTACACACTCATCATCTGCCTGCCATCCGGATACTTGGAAACTaGCATACACGGAGGAAACTGCATCACTCTGGAGAAACCTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: DLHTHHLPAIRILGN*HTRRKLHHSGETLV Trigger: CACTAAGGTTTCTCCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCAGGCAGATGATGAGTGTGTAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | GCATCACTCTGGAGAAACCTTAGTGTGAAGACTGAGAACATACCTTaGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCCAAGAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: ASLWRNLSVKTENIP*WKLLEACGTDAKRG Trigger: ACCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGGTATGTTCTCAGTCTTCACACTAAGGTTTCTCCAGAGTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CCA 90 bp | CCATCTAGACCTACACACTCATCATCTGCCTGCCATCCGGATACTTaGAAACTGACATACACGGAGGAAACTGCATCACTCTGGAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: PSRPTHSSSACHPDT*KLTYTEETASLWRN Trigger: GTTTCTCCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCAGGCAGATGATGAGTGTGTAGGTCTAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | ACCGAGACCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCCAAGAGGGGCACCTGCAAGGCCAGTaGTGCCCAGGGCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: TETLVETSRSLWHRCQEGHLQGQ*CPGLLV Trigger: GACAAGCAGCCCTGGGCATCACTGGCCTTGCAGGTG...CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGGTCTCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGCTGTTCTCAGGAGAGGGAAGATGCTGATGAAGGCCACTGTCTTGGTGCACCTGCAAGGCCAGTaGTGCCCAGGGCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: LAAVLRRGKMLMKATVLVHLQGQ*CPGLLV Trigger: GACAAGCAGCCCTGGGCATCACTGGCCTTGCAGGTG...CACCAAGACAGTGGCCTTCATCAGCATCTTCCCTCTCCTGAGAACAGCTGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
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| 3UTR CAA 90 bp | TTTCTTCCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTaGGAGGAGCCCCCAGCACACAGAAGGGAGAAGCCAAGGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: FLPATSKQGRLLHCG*EEPPAHRREKPRDS Trigger: TGAGTCCCTTGGCTTCTCCCTTCTGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTCATGGACTGGCAGCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGACACCTGCAAGGCCAGTaGTGCCCAGGGCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: EDSWTGSLVETSRSLWHRHLQGQ*CPGLLV Trigger: GACAAGCAGCCCTGGGCATCACTGGCCTTGCAGGTG...TCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGAATCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCTTCCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTGGAGGGATGCCAAGAGGGGTTaGCCCTTCCCCACCTGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SFFLLHPSRGGCYTVAWRDAKRG*PFPTWK Trigger: TTTCCAGGTGGGGAAGGGTCAACCCCTCTTGGCATC...CCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTGGAGGAGCCCCCACGGATACTTGGAAACTaGCATACACGGAGGAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: PATSKQGRLLHCGLEEPPRILGN*HTRRKL Trigger: CAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCG...TGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | CTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTTGGTGGAACACCTGCAAGGCCAGTaGTGCCCAGGGCTGCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: LRYSRLCSEDSWTGSLVEHLQGQ*CPGLLV Trigger: GACAAGCAGCCCTGGGCATCACTGGCCTTGCAGGTG...TTCCACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| 3UTR-3UTR GCA 90 bp | ACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGAGGGAGCCTGTGGCACAGATaGCAAGAGGGGTTGACCCTT | + |
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Preference number: 2 (lower is better) Translates to: TLGCVLRIHGLAAVLRRGSLWHR*QEGLTL Trigger: AAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCT...CCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| 3UTR-3UTR GCA 90 bp | TGCCATCCGGATACTTGGAAACTGACATACACGGAGGAAACTGCATCACTCTGGCCCAGTTCACAGACCTaGAAGGCCAGTGATGCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: CHPDTWKLTYTEETASLWPSSQT*KASDAQ Trigger: CTGGGCATCACTGGCCTTGCAGGTCTGTGAACTGGG...CCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | ATAGAGCTTGAAAGACCTCAAAGAACCTCCAGGATTCTCCCCAAGAGAGAAACTGACCTGCAAGGCCAGTaGTGCCCAGGGCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: IELERPQRTSRILPKRETDLQGQ*CPGLLV Trigger: GACAAGCAGCCCTGGGCATCACTGGCCTTGCAGGTC...AGTTTCTCTCTTGGGGAGAATCCTGGAGGTTCTTTGAGGTCTTTCAAGCTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR CCA 90 bp | CCGGATACTTGGAAACTGACATACACGGAGGAAACTGCATCACTCTGGAGAAACCCTGGCACCTACTCTTaGTCTGCCAGGCCATTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PDTWKLTYTEETASLWRNPGTYS*SARPLA Trigger: TGCCAATGGCCTGGCAGACCAAGAGTAGGTGCCAGG...GTTTCTCCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CAA 90 bp | CTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTaGGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCCAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: LRYSRLCSEDSWTGS*VETSRSLWHRCQEG Trigger: CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCCACCTGCAAGGCCAGTaGTGCCCAGGGCTGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCHLQGQ*CPGLLV Trigger: GACAAGCAGCCCTGGGCATCACTGGCCTTGCAGGTG...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074163.13 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR CAA 90 bp | GACTCAGGCTCTGAGTCCCTTGTACACGCTGAAGCTCTTCAGTCCTaGCAGCTTGCCATTACCTCGAAGCTGTCAGAAATACAATCTCTG | + |
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Preference number: 2 (lower is better) Translates to: DSGSESLVHAEALQS*QLAITSKLSEIQSL Trigger: CAGAGATTGTATTTCTGACAGCTTCGAGGTAATGGCAAGCTGCAAGGACTGAAGAGCTTCAGCGTGTACAAGGGACTCAGAGCCTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CAA 90 bp | GGCCACTGTCTTGGTCCGGGGATGCAACATAAACCGAGACCTGTTTaGACCTTAGCAAAAGTTGCCATTGTTTCCCTATTCTCTACCCCC | + |
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Preference number: 2 (lower is better) Translates to: GHCLGPGMQHKPRPV*TLAKVAIVSLFSTP Trigger: GGGGGTAGAGAATAGGGAAACAATGGCAACTTTTGCTAAGGTCAAAACAGGTCTCGGTTTATGTTGCATCCCCGGACCAAGACAGTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | AAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGCTCTGGGAGGTTTTTGGGGACGGTCTCAGTaGCCATTCTTCCTTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: KSSPLGSSKIQLLALGGFWGRSQ*PFFLGS Trigger: GGAACCAAGGAAGAATGGTCACTGAGACCGTCCCCA...AAAACCTCCCAGAGCTAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR GCA 90 bp | AAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGCTCTGGGAGGTTTTAGCCTGTGGCACAGATaGCAAGAGGGGTTGACCCTT | + |
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Preference number: 2 (lower is better) Translates to: KSSPLGSSKIQLLALGGFSLWHR*QEGLTL Trigger: AAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCT...AAAACCTCCCAGAGCTAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | AGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGACTTCTAGAAGCCTGTaGCACAGATGCCAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RYSRLCSEDSWTGSCSQETSRSL*HRCQEG Trigger: CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGT...CTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCTTCCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTGGAGGCAAGTCACGAGTTCATaGAATCATTTGCAGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: SFFLLHPSRGGCYTVAWRQVTSS*NHLQVT Trigger: TGTCACCTGCAAATGATTCCATGAACTCGTGACTTG...CCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGCTCTGGGAGGTTTTACTTCTAGAAGCCTGTaGCACAGATGCCAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: KSSPLGSSKIQLLALGGFTSRSL*HRCQEG Trigger: CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGT...AAAACCTCCCAGAGCTAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | ACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGAGGGCATAAACCGAGACCTTaGTGGAAACTTCTAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLGCVLRIHGLAAVLRRGHKPRP*WKLLEA Trigger: GGCTTCTAGAAGTTTCCACCAAGGTCTCGGTTTATG...CCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | TGCCATCCGGATACTTGGAAACTGACATACACGGAGGAAACTGCATCACTCTGGTGTTCTGAGGATTCATaGACTGGCAGCTGTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: CHPDTWKLTYTEETASLWCSEDS*TGSCSQ Trigger: CTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACA...CCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR CCA 90 bp | ACTTGGAAACTGACATACACGGAGGAAACTGCATCACTCTGGAGAAACCTTAGTCACACATGTGTGGCCTaGCACCTACTCTTGGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: TWKLTYTEETASLWRNLSHTCVA*HLLLVC Trigger: GCAGACCAAGAGTAGGTGCCAGGCCACACATGTGTG...ACTAAGGTTTCTCCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTGGGGACGGTCTCAGTaGCCATTCTTCCTTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCWGRSQ*PFFLGS Trigger: GGAACCAAGGAAGAATGGTCACTGAGACCGTCCCCA...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTCCTTGGTTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTAGCCTGTGGCACAGATaGCAAGAGGGGTTGACCCTT | + |
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Preference number: 2 (lower is better) Translates to: ILPWFLRYSRLCSEDSWTSLWHR*QEGLTL Trigger: AAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCT...AGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAACCAAGGAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTATGGGGACGGTCTCAGTaGCCATTCTTCCTTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLWGRSQ*PFFLGS Trigger: GGAACCAAGGAAGAATGGTCACTGAGACCGTCCCCA...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR TCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCGGAATCATTTGCAGGTaGCAGCAAAGGACCGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCGIICR*QQRTEG Trigger: ACCCTCGGTCCTTTGCTGTCACCTGCAAATGATTCC...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTCCTTGGTTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTACTTCTAGAAGCCTGTaGCACAGATGCCAAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: ILPWFLRYSRLCSEDSWTTSRSL*HRCQEG Trigger: CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGT...AGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAACCAAGGAAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGCTCTGGGAGGTTTTTGTTCTGAGGATTCATaGACTGGCAGCTGTTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KSSPLGSSKIQLLALGGFCSEDS*TGSCSQ Trigger: CTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACA...AAAACCTCCCAGAGCTAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | GCTAATGTAATACCGGGATGCCAAAGAAGTCTGTGGTTCCCAGCCCTCTTTCTTGTGACCATTCTTCCTTaGTTCCTGAGATACTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: ANVIPGCQRSLWFPALFLVTILP*FLRYSR Trigger: CCTAGAGTATCTCAGGAACCAAGGAAGAATGGTCAC...AAGAAAGAGGGCTGGGAACCACAGACTTCTTTGGCATCCCGGTATTACATTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGACACTCCATGGCTCTaGGCTCCAACTGTTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLDTPWL*APTVAV Trigger: GACTGCAACAGTTGGAGCCCAGAGCCATGGAGTGTC...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR-3UTR CCA 90 bp | TGTCTAGCTGCCAAACTAATAGAGCTTGAAAGACCTCAAAGAACCTCCAGGATTACACACACACATGTGTaGCCTGGCACCTACTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: CLAAKLIELERPQRTSRITHTHV*PGTYSW Trigger: CCAAGAGTAGGTGCCAGGCCACACATGTGTGTGTGT...AATCCTGGAGGTTCTTTGAGGTCTTTCAAGCTCTATTAGTTTGGCAGCTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR-3UTR CCA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAACTTCTAGAAGCCTGTaGCACAGATGCCAAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLTSRSL*HRCQEG Trigger: CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGT...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCGGACTGGCAGCTTGGTaGAAACTTCTAGAAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCGLAAW*KLLEAC Trigger: ACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCC...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186602.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTTCCTTGGTTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTCATGGACTGGCAGCTTaGTGGAAACTTCTAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ILPWFLRYSRLCSEDSWTHGLAA*WKLLEA Trigger: GGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATG...AGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAACCAAGGAAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTGTTCTGAGGATTCATaGACTGGCAGCTGTTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCCSEDS*TGSCSQ Trigger: CTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACA...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000189849.7 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGGAGAAACCTTAGTGTGAAGACTGAGAACATACCTTGGTGGAAACTTCTAGCAGGACTCCGACTGTaGCTCTTAAAAGATCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LWRNLSVKTENIPWWKLLAGLRL*LLKDQF Trigger: AAACTGATCTTTTAAGAGTCACAGTCGGAGTCCTGC...TAGAAGTTTCCACCAAGGTATGTTCTCAGTCTTCACACTAAGGTTTCTCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCAAACCGAGACCTTGGTaGAAACTTCTAGAAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCKPRPW*KLLEAC Trigger: ACAGGCTTCTAGAAGTTTCCACCAAGGTCTCGGTTT...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCCATAAACCGAGACCTTaGTGGAAACTTCTAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCHKPRP*WKLLEA Trigger: GGCTTCTAGAAGTTTCCACCAAGGTCTCGGTTTATG...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTAGCTGCCAAACTAATAGAGCTTGAAAGACCTCAAAGAACCTCCAGGATTGAGAACATACCTTGGTaGAAACTTCTAGAAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CLAAKLIELERPQRTSRIENIPW*KLLEAC Trigger: ACAGGCTTCTAGAAGTTTCCACCAAGGTATGTTCTC...AATCCTGGAGGTTCTTTGAGGTCTTTCAAGCTCTATTAGTTTGGCAGCTAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR-3UTR CCA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTACAAGTCACGAGTTCATaGAATCATTTGCAGGTGACA | + |
|
Preference number: 2 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLQVTSS*NHLQVT Trigger: TGTCACCTGCAAATGATTCCATGAACTCGTGACTTG...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| 3UTR GCA 72 bp | CCCTCTTTCTTCCTGCTACATCCAAGCAGGGGAGGCTaGTACACTGTGGCTTGGAGGAGCCCCCAGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: PSFFLLHPSRGG*YTVAWRSPQHT Trigger: TGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR CCA 72 bp | CTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTaGAGGAGCCCCCAGCACACAGAAGGGAGAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LHPSRGGCYTVA*RSPQHTEGRSQ Trigger: TTGGCTTCTCCCTTCTGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCAGCTGTTCTCAGGAGAGGGAAGATGCTGATGAAGGCCACTGTCTTGGTGAGATGCCAAGAGGGGTaGACCCTTCCCCACCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LAAVLRRGKMLMKATVLVRCQEG*TLPHLQ Trigger: TTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCT...CACCAAGACAGTGGCCTTCATCAGCATCTTCCCTCTCCTGAGAACAGCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
||
| 3UTR GCA 72 bp | ACCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGATaGCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLVETSRSLWHR*QEGLTLPHLQG Trigger: GCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
||
| 3UTR GCA 72 bp | ACACACACATGTGTGGCCTGGCACCTACTCTTGGTCTaGCAGGCCATTGGCAGGACTCCGACTGTGACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: THTCVAWHLLLV*QAIGRTPTVTL Trigger: AAGAGTCACAGTCGGAGTCCTGCCAATGGCCTGGCAGACCAAGAGTAGGTGCCAGGCCACACATGTGTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR GCA 72 bp | AGCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGATaGCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLVETSRSLWHR*QEGLTLPHLQG Trigger: GCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
||
| 3UTR GCA 72 bp | GTCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGATaGCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLVETSRSLWHR*QEGLTLPHLQG Trigger: GCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
||
| 3UTR CCA 72 bp | CCGACCCTCAGCCATTCGGTAGACACTCCATGGCTCTaGGCTCCAACTGTTGCAGTCTCTCAGCCAAGTACT | + |
|
Preference number: 3 (lower is better) Translates to: PTLSHSVDTPWL*APTVAVSQPST Trigger: AGTACTTGGCTGAGAGACTGCAACAGTTGGAGCCCAGAGCCATGGAGTGTCTACCGAATGGCTGAGGGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| 3UTR CCA 72 bp | CCTCAGAGTAAGAGGGGGTACACACACACACATGTGTaGCCTGGCACCTACTCTTGGTCTGCCAGGCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: PQSKRGYTHTHV*PGTYSWSARPL Trigger: CAATGGCCTGGCAGACCAAGAGTAGGTGCCAGGCCACACATGTGTGTGTGTGTACCCCCTCTTACTCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR GCA 72 bp | CCAAAGAAGTCTGTGGTTCCCAGCCCTCTTTCTTCCTaGTACATCCAAGCAGGGGAGGCTGCTACACTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PKKSVVPSPLSS*YIQAGEAATLW Trigger: CCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGGAAGAAAGAGGGCTGGGAACCACAGACTTCTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR TCA 72 bp | CTTGTCAAGTCACGAGTTCATGGAATCATTTGCAGGTaGCAGCAAAGGACCGAGGGTGTGGGGACGGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LVKSRVHGIICR*QQRTEGVGTVS Trigger: TGAGACCGTCCCCACACCCTCGGTCCTTTGCTGTCACCTGCAAATGATTCCATGAACTCGTGACTTGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| 3UTR CCA 72 bp | TGTCTTGGTCCGGGGATGCAACATAAACCGAGACCTTaGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: CLGPGMQHKPRP*WKLLEACGTDA Trigger: GGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGGTCTCGGTTTATGTTGCATCCCCGGACCAAGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTTGGTGAGATGCCAAGAGGGGTaGACCCTTCCCCACCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FLRYSRLCSEDSWTGSLVRCQEG*TLPHLQ Trigger: TTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCT...CACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
||
| 3UTR CCA 72 bp | GAGGGTGTGGGGACGGTCTCAGTGACCATTCTTCCTTaGTTCCTGAGATACTCTAGGTTGTGTTCTGAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: EGVGTVSVTILP*FLRYSRLCSED Trigger: ATCCTCAGAACACAACCTAGAGTATCTCAGGAACCAAGGAAGAATGGTCACTGAGACCGTCCCCACACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| 3UTR CCA 72 bp | CTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTTaGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: LGCVLRIHGLAA*WKLLEACGTDA Trigger: GGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGCCTGGCACCTACTCTaGGTCTGCCAGGCCATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLAWHLL*VCQAIG Trigger: GCCAATGGCCTGGCAGACCAAGAGTAGGTGCCAGGC...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR TCA 72 bp | TCTTGGTCTGCCAGGCCATTGGCAGGACTCCGACTGTaGCTCTTAAAAGATCAGTTTGGGAAGATAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SWSARPLAGLRL*LLKDQFGKIAA Trigger: TGCAGCTATCTTCCCAAACTGATCTTTTAAGAGTCACAGTCGGAGTCCTGCCAATGGCCTGGCAGACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR CCA 72 bp | CCTACACACTCATCATCTGCCTGCCATCCGGATACTTaGAAACTGACATACACGGAGGAAACTGCATCACTC | + |
|
Preference number: 3 (lower is better) Translates to: PTHSSSACHPDT*KLTYTEETASL Trigger: GAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCAGGCAGATGATGAGTGTGTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR TCA 72 bp | ACTCATCATCTGCCTGCCATCCGGATACTTGGAAACTaGCATACACGGAGGAAACTGCATCACTCTGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: THHLPAIRILGN*HTRRKLHHSGE Trigger: TTCTCCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCAGGCAGATGATGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR CCA 72 bp | TTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATaGACTGGCAGCTGTTCTCAGGAGAGGGAAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: FLRYSRLCSEDS*TGSCSQEREDA Trigger: AGCATCTTCCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
||
| 3UTR-3UTR CAA 90 bp | AGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGATGAAGGCCACTGTCTaGGTGGAAACTTCTAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RYSRLCSEDSWTGSCSQEMKATV*VETSRS Trigger: GCTTCTAGAAGTTTCCACCAAGACAGTGGCCTTCAT...CTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
||
| 3UTR CCA 72 bp | AGTACTCAAAGGTACTCTTGTCAAGTCACGAGTTCATaGAATCATTTGCAGGTGACAGCAAAGGACCGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: STQRYSCQVTSS*NHLQVTAKDRG Trigger: CCCTCGGTCCTTTGCTGTCACCTGCAAATGATTCCATGAACTCGTGACTTGACAAGAGTACCTTTGAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| 3UTR CCA 72 bp | TGGAGAAACCTTAGTGTGAAGACTGAGAACATACCTTaGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: WRNLSVKTENIP*WKLLEACGTDA Trigger: GGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGGTATGTTCTCAGTCTTCACACTAAGGTTTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR CCA 72 bp | TTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATaGACTGGCAGCTTGGTGGAAACTTCTAGAAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLRYSRLCSEDS*TGSLVETSRSL Trigger: CAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
||
| 3UTR-3UTR CAA 90 bp | GCTAATGTAATACCGGGATGCCAAAGAAGTCTGTGGTTCCCAGCCCTCTTTCTTTACTCAAAGGTACTCTaGTCAAGTCACGAGTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: ANVIPGCQRSLWFPALFLYSKVL*SSHEFM Trigger: CATGAACTCGTGACTTGACAAGAGTACCTTTGAGTA...AAGAAAGAGGGCTGGGAACCACAGACTTCTTTGGCATCCCGGTATTACATTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTCATGGACTGGCAGCTaGGTGGAAACTTCTAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCSWTGS*VETSRS Trigger: GCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGA...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186602.7 |
||
| 3UTR CCA 72 bp | TTGCCATTACCTCGAAGCTGTCAGAAATACAATCTCTaGACCCATCTAGACCTACACACTCATCATCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLPRSCQKYNL*THLDLHTHHLP Trigger: AGGCAGATGATGAGTGTGTAGGTCTAGATGGGTCCAGAGATTGTATTTCTGACAGCTTCGAGGTAATGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGCTTGAAAGACCTCAAAGAACCTCCAGGATTCTCCCCAAGAGAGAAACTCTGAGATACTCTAGGTaGTGTTCTGAGGATTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: IELERPQRTSRILPKRETLRYSR*CSEDSW Trigger: CCATGAATCCTCAGAACACAACCTAGAGTATCTCAG...AGTTTCTCTCTTGGGGAGAATCCTGGAGGTTCTTTGAGGTCTTTCAAGCTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR CCA 72 bp | TGGAAACTGACATACACGGAGGAAACTGCATCACTCTaGAGAAACCTTAGTGTGAAGACTGAGAACATACCT | + |
|
Preference number: 3 (lower is better) Translates to: WKLTYTEETASL*RNLSVKTENIP Trigger: AGGTATGTTCTCAGTCTTCACACTAAGGTTTCTCCAGAGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| 3UTR-3UTR CAA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTACTGAGATACTCTAGGTaGTGTTCTGAGGATTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLLRYSR*CSEDSW Trigger: CCATGAATCCTCAGAACACAACCTAGAGTATCTCAG...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| CDS-3UTR CCA 90 bp | CAGATGCCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGCCAGTGATGCCCAGGCGTGGGGTCAGCTCCTaGGGCCCCCAGGCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QMPRGVDPSPPARPVMPRRGVSS*GPQASD Trigger: GTCGGAGGCCTGGGGGCCCCAGGAGCTGACCCCACG...CCTGGGCATCACTGGCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000074163.13 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| CDS-3UTR GCA 90 bp | CAGATGCCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGCCAGTGATGCCCAGGGACGCCTGTCAGGGCTaGGTCGCCGCCTCGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: QMPRGVDPSPPARPVMPRDACQG*VAASGS Trigger: GGATCCCGAGGCGGCGACGCAGCCCTGACAGGCGTC...CCTGGGCATCACTGGCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000074163.13 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| CDS-3UTR CCA 90 bp | GTGGCACAGATGCCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGCCAGTGATGCGTGGGGTCAGCTCCTaGGGCCCCCAGGCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VAQMPRGVDPSPPARPVMRGVSS*GPQASD Trigger: GTCGGAGGCCTGGGGGCCCCAGGAGCTGACCCCACG...CATCACTGGCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTGTGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000074163.13 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
||
| CDS-3UTR GCA 90 bp | GGTGCCCTTTACTGTAGCCCAGTTCACAGACCTGCAAGGCCAGTGATGCCCAGGGACGCCTGTCAGGGCTaGGTCGCCGCCTCGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GALYCSPVHRPARPVMPRDACQG*VAASGS Trigger: GGATCCCGAGGCGGCGACGCAGCCCTGACAGGCGTC...CCTGGGCATCACTGGCCTTGCAGGTCTGTGAACTGGGCTACAGTAAAGGGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| CDS-3UTR TCA 90 bp | CCTGCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTTGGAGGAGCCCCCAGACTCGGCCAGCAACTaGTCCAGCAGGCGTAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PATSKQGRLLHCGLEEPPDSASN*SSRRRV Trigger: GACCCTACGCCTGCTGGATCAGTTGCTGGCCGAGTC...TGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
||
| CDS-3UTR CCA 90 bp | ACCGAGACCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCCAAGAGGGGCGTGGGGTCAGCTCCTaGGGCCCCCAGGCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TETLVETSRSLWHRCQEGRGVSS*GPQASD Trigger: GTCGGAGGCCTGGGGGCCCCAGGAGCTGACCCCACG...CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGGTCTCGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000074163.13 ENSMUST00000189849.7 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGCTAGACTGGAACTTGCTATATACAGAAGGCGGGCCTGGAACTCTTGCCGTGGGGTCAGCTCCTaGGGCCCCCAGGCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: ALARLELAIYRRRAWNSCRGVSS*GPQASD Trigger: GTCGGAGGCCTGGGGGCCCCAGGAGCTGACCCCACG...GCAAGAGTTCCAGGCCCGCCTTCTGTATATAGCAAGTTCCAGTCTAGCCAGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172771.2 |
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| 3UTR CAA 72 bp | GCTACATCCAAGCAGGGGAGGCTGCTACACTGTGGCTaGGAGGAGCCCCCAGCACACAGAAGGGAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ATSKQGRLLHCG*EEPPAHRREKP Trigger: TGGCTTCTCCCTTCTGTGTGCTGGGGGCTCCTCCAAGCCACAGTGTAGCAGCCTCCCCTGCTTGGATGTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| CDS-3UTR GCA 90 bp | ACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGAGGGGACGCCTGTCAGGGCTaGGTCGCCGCCTCGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: TLGCVLRIHGLAAVLRRGDACQG*VAASGS Trigger: GGATCCCGAGGCGGCGACGCAGCCCTGACAGGCGTC...CCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| CDS-3UTR TCA 90 bp | ACTGGCAGCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGATGCCAAGAGGGGGACTCGGCCAGCAACTaGTCCAGCAGGCGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: TGSLVETSRSLWHRCQEGDSASN*SSRRRV Trigger: GACCCTACGCCTGCTGGATCAGTTGCTGGCCGAGTC...CCCCTCTTGGCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| CDS-3UTR TCA 90 bp | GTGGCACAGATGCCAAGAGGGGTTGACCCTTCCCCACCTGCAAGGCCAGTGATGGCTCAATGCTCGCCATaGGCTCCTCTTCTGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VAQMPRGVDPSPPARPVMAQCSP*APLLSS Trigger: ACTACTCAGAAGAGGAGCTCATGGCGAGCATTGAGC...CATCACTGGCCTTGCAGGTGGGGAAGGGTCAACCCCTCTTGGCATCTGTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000074163.13 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS-3UTR TCA 90 bp | ATGCTGATGAAGGCCACTGTCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGAGACTCGGCCAGCAACTaGTCCAGCAGGCGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: MLMKATVLVETSRSLWHRDSASN*SSRRRV Trigger: GACCCTACGCCTGCTGGATCAGTTGCTGGCCGAGTC...TCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGACAGTGGCCTTCATCAGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
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| 3UTR CAA 72 bp | GAAGGGAGAAGCCAAGGGACTCAGGCTCTGAGTCCCTaGTACACGCTGAAGCTCTTCAGTCCTTGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: EGRSQGTQALSP*YTLKLFSPCSL Trigger: CAAGCTGCAAGGACTGAAGAGCTTCAGCGTGTACAAGGGACTCAGAGCCTGAGTCCCTTGGCTTCTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| CDS-3UTR TCA 90 bp | AGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGGACTCGGCCAGCAACTaGTCCAGCAGGCGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RYSRLCSEDSWTGSCSQEDSASN*SSRRRV Trigger: GACCCTACGCCTGCTGGATCAGTTGCTGGCCGAGTC...CTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| CDS-3UTR TCA 90 bp | CTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTTGGTGGAAGACTCGGCCAGCAACTaGTCCAGCAGGCGTAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LRYSRLCSEDSWTGSLVEDSASN*SSRRRV Trigger: GACCCTACGCCTGCTGGATCAGTTGCTGGCCGAGTC...TTCCACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| CDS-3UTR GCA 90 bp | ATTCTTCCTTGGTTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGACGCCTGTCAGGGCTaGGTCGCCGCCTCGGGATCC | + |
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Preference number: 4 (lower is better) Translates to: ILPWFLRYSRLCSEDSWTDACQG*VAASGS Trigger: GGATCCCGAGGCGGCGACGCAGCCCTGACAGGCGTC...AGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAACCAAGGAAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS-3UTR CCA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTACGTGGGGTCAGCTCCTaGGGCCCCCAGGCCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLRGVSS*GPQASD Trigger: GTCGGAGGCCTGGGGGCCCCAGGAGCTGACCCCACG...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR CAA 72 bp | AGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTaGCTAGCTCTGGGAGGTTTTGACCCGACCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SKSSPLGSSKIQ*LALGGFDPTLS Trigger: GCTGAGGGTCGGGTCAAAACCTCCCAGAGCTAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR CAA 72 bp | CTCAGGAGAGGGAAGATGCTGATGAAGGCCACTGTCTaGGTGGAAACTTCTAGAAGCCTGTGGCACAGATGC | + |
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Preference number: 4 (lower is better) Translates to: LRRGKMLMKATV*VETSRSLWHRC Trigger: GCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGACAGTGGCCTTCATCAGCATCTTCCCTCTCCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173145.8 |
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| CDS-3UTR TCA 90 bp | ACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGAGGGCATGAGCTCCTCTTCTaGGTAGTCATAGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: TLGCVLRIHGLAAVLRRGHELLF*VVIGDG Trigger: GCCATCTCCTATGACTACTCAGAAGAGGAGCTCATG...CCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| CDS-3UTR TCA 90 bp | GAGGATTCATGGACTGGCAGCTTGGTGGAAACTTCTAGAAGCCTGTGGCACAGACATGAGCTCCTCTTCTaGGTAGTCATAGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: EDSWTGSLVETSRSLWHRHELLF*VVIGDG Trigger: GCCATCTCCTATGACTACTCAGAAGAGGAGCTCATG...TCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGAATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| CDS-3UTR TCA 90 bp | TCTGAGGATTCATGGACTGGCAGCTGTTCTCAGGAGAGGGAAGATGCTGATGAACATGAGCTCCTCTTCTaGGTAGTCATAGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: SEDSWTGSCSQEREDADEHELLF*VVIGDG Trigger: GCCATCTCCTATGACTACTCAGAAGAGGAGCTCATG...TTCATCAGCATCTTCCCTCTCCTGAGAACAGCTGCCAGTCCATGAATCCTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000173145.8 ENSMUST00000189849.7 |
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| CDS-3UTR TCA 90 bp | TCTAGACCTACACACTCATCATCTGCCTGCCATCCGGATACTTGGAAACTGACAGCTCAATGCTCGCCATaGGCTCCTCTTCTGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SRPTHSSSACHPDTWKLTAQCSP*APLLSS Trigger: ACTACTCAGAAGAGGAGCTCATGGCGAGCATTGAGC...TGTCAGTTTCCAAGTATCCGGATGGCAGGCAGATGATGAGTGTGTAGGTCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CAA 72 bp | TCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTaGGTGGAAACTTCTAGAAGCCTGTGGCACAGATGC | + |
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Preference number: 4 (lower is better) Translates to: SRLCSEDSWTGS*VETSRSLWHRC Trigger: GCATCTGTGCCACAGGCTTCTAGAAGTTTCCACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| CDS-3UTR TCA 90 bp | TTCCTGAGATACTCTAGGTTGTGTTCTGAGGATTCATGGACTGGCAGCTTGGTGCATGAGCTCCTCTTCTaGGTAGTCATAGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: FLRYSRLCSEDSWTGSLVHELLF*VVIGDG Trigger: GCCATCTCCTATGACTACTCAGAAGAGGAGCTCATG...CACCAAGCTGCCAGTCCATGAATCCTCAGAACACAACCTAGAGTATCTCAGGAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163514.9 ENSMUST00000186602.7 |
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| 3UTR CAA 72 bp | ACCTACACACTCATCATCTGCCTGCCATCCGGATACTaGGAAACTGACATACACGGAGGAAACTGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: TYTLIICLPSGY*ETDIHGGNCIT Trigger: AGTGATGCAGTTTCCTCCGTGTATGTCAGTTTCCAAGTATCCGGATGGCAGGCAGATGATGAGTGTGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| 3UTR CAA 72 bp | TCTGAGTCCCTTGTACACGCTGAAGCTCTTCAGTCCTaGCAGCTTGCCATTACCTCGAAGCTGTCAGAAATA | + |
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Preference number: 4 (lower is better) Translates to: SESLVHAEALQS*QLAITSKLSEI Trigger: TATTTCTGACAGCTTCGAGGTAATGGCAAGCTGCAAGGACTGAAGAGCTTCAGCGTGTACAAGGGACTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| CDS-3UTR TCA 90 bp | CAGCTTGCCATTACCTCGAAGCTGTCAGAAATACAATCTCTGGACCCATCTAGACATGAGCTCCTCTTCTaGGTAGTCATAGGAGATGGC | + |
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Preference number: 4 (lower is better) Translates to: QLAITSKLSEIQSLDPSRHELLF*VVIGDG Trigger: GCCATCTCCTATGACTACTCAGAAGAGGAGCTCATG...TCTAGATGGGTCCAGAGATTGTATTTCTGACAGCTTCGAGGTAATGGCAAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| CDS-3UTR TCA 90 bp | AGCTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCGCTCAATGCTCGCCATaGGCTCCTCTTCTGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SFIFIAKAVLWAPVRYSCAQCSP*APLLSS Trigger: ACTACTCAGAAGAGGAGCTCATGGCGAGCATTGAGC...GCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS-3UTR TCA 90 bp | CTTCATTTTCATAGCAAAAGCAGTCCTTTGGGCTCCAGTAAGATACAGTTGCTAGCTCAATGCTCGCCATaGGCTCCTCTTCTGAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LHFHSKSSPLGSSKIQLLAQCSP*APLLSS Trigger: ACTACTCAGAAGAGGAGCTCATGGCGAGCATTGAGC...TAGCAACTGTATCTTACTGGAGCCCAAAGGACTGCTTTTGCTATGAAAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| 3UTR CAA 72 bp | CTTGGTCCGGGGATGCAACATAAACCGAGACCTGTTTaGACCTTAGCAAAAGTTGCCATTGTTTCCCTATTC | + |
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Preference number: 4 (lower is better) Translates to: LGPGMQHKPRPV*TLAKVAIVSLF Trigger: GAATAGGGAAACAATGGCAACTTTTGCTAAGGTCAAAACAGGTCTCGGTTTATGTTGCATCCCCGGACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156453.10 |
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| CDS GCA 90 bp | CCTCCGAGGCTGTCTCTCCCGGGCCTGTCTGACGCCTGTCAGGGCTaGGTCGCCGCCTCGGGATCCGGCCGCTCCGGCTGCTGCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PPRLSLPGLSDACQG*VAASGSGRSGCCRC Trigger: GCAGCGGCAGCAGCCGGAGCGGCCGGATCCCGAGGCGGCGACGCAGCCCTGACAGGCGTCAGACAGGCCCGGGAGAGACAGCCTCGGAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS CCA 90 bp | TTCAGAGGCACAGCTGTCTTCAGGGTTGCCTTTAACCTTCTTCTCTaGGGACACCGCGGGTGCGAGCCGGGCGGGGCCTCGTGGGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: FRGTAVFRVAFNLLL*GHRGCEPGGASWGQ Trigger: CTGACCCCACGAGGCCCCGCCCGGCTCGCACCCGCGGTGTCCCCAGAGAAGAAGGTTAAAGGCAACCCTGAAGACAGCTGTGCCTCTGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000172771.2 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS TCA 90 bp | TCAGCGGCAGTACTCCCGCTCAATGCTCGCCATGAGCTCCTCTTCTaGGTAGTCATAGGAGATGGCCGACTGCCCCTCGGGTCTCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SAAVLPLNARHELLF*VVIGDGRLPLGSLG Trigger: CCCAAGAGACCCGAGGGGCAGTCGGCCATCTCCTATGACTACTCAGAAGAGGAGCTCATGGCGAGCATTGAGCGGGAGTACTGCCGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS TCA 72 bp | GTGCCGCCCTCCGAGGCTGTCTCTCCCGGGCCTGTCTaGCGCCTGTCAGGGCTGCGTCGCCGCCTCGGGATC | + |
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Preference number: 6 (lower is better) Translates to: VPPSEAVSPGPV*RLSGLRRRLGI Trigger: GATCCCGAGGCGGCGACGCAGCCCTGACAGGCGTCAGACAGGCCCGGGAGAGACAGCCTCGGAGGGCGGCAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS CCA 72 bp | ACAGCTGTCTTCAGGGTTGCCTTTAACCTTCTTCTCTaGGGACACCGCGGGTGCGAGCCGGGCGGGGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: TAVFRVAFNLLL*GHRGCEPGGAS Trigger: CGAGGCCCCGCCCGGCTCGCACCCGCGGTGTCCCCAGAGAAGAAGGTTAAAGGCAACCCTGAAGACAGCTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000074163.13 ENSMUST00000156453.10 ENSMUST00000163514.9 ENSMUST00000172771.2 ENSMUST00000173145.8 ENSMUST00000186602.7 ENSMUST00000189849.7 |
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| CDS TCA 72 bp | AAGTTCATTTTCTTGATGACGGTTTTGGAGCTGCAATaGTGTCCTTATAGCAAAGGACAGTTCAGAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: KFIFLMTVLELQ*CPYSKGQFRGT Trigger: TGTGCCTCTGAACTGTCCTTTGCTATAAGGACATCATTGCAGCTCCAAAACCGTCATCAAGAAAATGAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172771.2 |
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