Pregenerated sensors for CYREN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046806Ensembl transcript IDs: ENSMUST00000055097.11, ENSMUST00000115006.2, ENSMUST00000115007.9, ENSMUST00000118559.2
Found 178 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGTTCGTCCCTCTGCCTCTCCTCCTTGCCCAGTACAACAGAGATaGGGGAGAGTGGCGGCTGGCCGTGTGCTTCCTGGCGGCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: SVRPSASPPCPVQQR*GRVAAGRVLPGGIL Trigger: GAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAAGGAGGAGAGGCAGAGGGACGAACACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | CACCTGCCCTTCGTGGGCATCATGATCCTCTTGGCCGCGGCCCTGTaGCTGATGTTCTACGCTCTCCTCTGGAAGGCTGGCAACCTCGCT | + |
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Preference number: 1 (lower is better) Translates to: HLPFVGIMILLAAAL*LMFYALLWKAGNLA Trigger: AGCGAGGTTGCCAGCCTTCCAGAGGAGAGCGTAGAACATCAGGCACAGGGCCGCGGCCAAGAGGATCATGATGCCCACGAAGGGCAGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CCA 90 bp | CTCTCCTCCTTGCCCAGTACAACAGAGATGAGGGAGAGTGGCGGCTaGCCGTGTGCTTCCTGGCGGCATCCTCCATTCTGTTGGCCGGAG | + |
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Preference number: 1 (lower is better) Translates to: LSSLPSTTEMRESGG*PCASWRHPPFCWPE Trigger: CTCCGGCCAACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAAGGAGGAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CCA 90 bp | GGGCATTCCTCAGGTTGGACTAGCCCTGGCCAGGCTCGGTGTGTATaGAGCCCTGGTCCTCACAGTGTTCGTCCCTCTGCCTCTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GHSSGWTSPGQARCV*SPGPHSVRPSASPP Trigger: AGGAGGAGAGGCAGAGGGACGAACACTGTGAGGACCAGGGCTCCATACACACCGAGCCTGGCCAGGGCTAGTCCAACCTGAGGAATGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | TCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAGGTaGCTGGTGGTAGACAGGGCCTGTGTGGCTCACCAGCCTCACAGT | + |
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Preference number: 1 (lower is better) Translates to: SPLQGSRWRPQEEER*LVVDRACVAHQPHS Trigger: ACTGTGAGGCTGGTGAGCCACACAGGCCCTGTCTACCACCAGTCACCTCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | CTTGCCCAGTACAACAGAGATGAGGGAGAGTGGCGGCTGGCCGTGTaGTTCCTGGCGGCATCCTCCATTCTGTTGGCCGGAGGACTAAGC | + |
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Preference number: 1 (lower is better) Translates to: LAQYNRDEGEWRLAV*FLAASSILLAGGLS Trigger: GCTTAGTCCTCCGGCCAACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CCA 90 bp | CCTCTGCCTCTCCTCCTTGCCCAGTACAACAGAGATGAGGGAGAGTaGCGGCTGGCCGTGTGCTTCCTGGCGGCATCCTCCATTCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: PLPLLLAQYNRDEGE*RLAVCFLAASSILL Trigger: CAACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAAGGAGGAGAGGCAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CCA 90 bp | ATCCTCTTGGCCGCGGCCCTGTGCCTGATGTTCTACGCTCTCCTCTaGAAGGCTGGCAACCTCGCTGACCTACCTAGCCTGAGAATCGGC | + |
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Preference number: 1 (lower is better) Translates to: ILLAAALCLMFYALL*KAGNLADLPSLRIG Trigger: GCCGATTCTCAGGCTAGGTAGGTCAGCGAGGTTGCCAGCCTTCCAGAGGAGAGCGTAGAACATCAGGCACAGGGCCGCGGCCAAGAGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | TCTAGGAGCAGGAGGCTCCTAGACTGGCAGGGAACTGTGGGCAGTTaGCAGCCTGTTTGGTTGGGAGGGTGGAAGCTTACTGCTGGACTG | + |
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Preference number: 1 (lower is better) Translates to: SRSRRLLDWQGTVGS*QPVWLGGWKLTAGL Trigger: CAGTCCAGCAGTAAGCTTCCACCCTCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGTCTAGGAGCCTCCTGCTCCTAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | ATAGCTAATGTTGATCTCCAGCACAGCAGAGGGGACCACTCACTGTaGAGACGGGCTGTGGTGTCAAGGAACCCAGAGGCGGCTTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: IANVDLQHSRGDHSL*RRAVVSRNPEAAWR Trigger: CCTCCAAGCCGCCTCTGGGTTCCTTGACACCACAGCCCGTCTGCACAGTGAGTGGTCCCCTCTGCTGTGCTGGAGATCAACATTAGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | CTTTATGAGGACCTGAGACACTCTCAGAGAGCCCCCAACAGCCTGTaGTATCCATGCTGCGGGAAAGCCCTTTACCTGAGGGCTGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: LYEDLRHSQRAPNSL*YPCCGKALYLRAAA Trigger: AGCCGCAGCCCTCAGGTAAAGGGCTTTCCCGCAGCATGGATATCACAGGCTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTCCTCATAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | ACGCTCTCCTCTGGAAGGCTGGCAACCTCGCTGACCTACCTAGCCTaGGAATCGGCTTCTACAACTTCTGTCTGTGGAAGGAGGACATGG | + |
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Preference number: 1 (lower is better) Translates to: TLSSGRLATSLTYLA*ESASTTSVCGRRTW Trigger: CCATGTCCTCCTTCCACAGACAGAAGTTGTAGAAGCCGATTCTCAGGCTAGGTAGGTCAGCGAGGTTGCCAGCCTTCCAGAGGAGAGCGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | CCTGGACCTGACAGCAAACAGGAATCAGCTGTTAAGCCATCCTCGTaGCCCAGGGATGCAGACGCAAAATGTGTCAACTCCTGGAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: PGPDSKQESAVKPSS*PRDADAKCVNSWKV Trigger: CACCTTCCAGGAGTTGACACATTTTGCGTCTGCATCCCTGGGTCACGAGGATGGCTTAACAGCTGATTCCTGTTTGCTGTCAGGTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | CGTGACCCAGGGATGCAGACGCAAAATGTGTCAACTCCTGGAAGGTaGACAGGATTGAATAGTCGTCACAAACACACACCGTGTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: RDPGMQTQNVSTPGR*TGLNSRHKHTPCPL Trigger: GAGGGGACACGGTGTGTGTTTGTGACGACTATTCAATCCTGTTCACCTTCCAGGAGTTGACACATTTTGCGTCTGCATCCCTGGGTCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | AGGGTGGAGCAGGGAAAGTCTGTAACAGGATGCGTTTCTGCATCCTaGTACAGAAAAAGTCCCACCCAAACTGACAACCTCCTGGGACTG | + |
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Preference number: 1 (lower is better) Translates to: RVEQGKSVTGCVSAS*YRKSPTQTDNLLGL Trigger: CAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCTGTAGCAGGATGCAGAAACGCATCCTGTTACAGACTTTCCCTGCTCCACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR CCA 90 bp | GCTGACCTACCTAGCCTGAGAATCGGCTTCTACAACTTCTGTCTGTaGAAGGAGGACATGGGCTCCCTAGCATGTTACAACTTTCCCGAG | + |
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Preference number: 1 (lower is better) Translates to: ADLPSLRIGFYNFCL*KEDMGSLACYNFPE Trigger: CTCGGGAAAGTTGTAACATGCTAGGGAGCCCATGTCCTCCTTCCACAGACAGAAGTTGTAGAAGCCGATTCTCAGGCTAGGTAGGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | CTTCTAACCTCAAAGCAGTGGACCACTGTGACTGGGACCTGGCTGTaGCTTGGGACCTCCTATCTTCATGAGGACAGAAAGAATGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LLTSKQWTTVTGTWL*LGTSYLHEDRKNGN Trigger: GTTCCCATTCTTTCTGTCCTCATGAAGATAGGAGGTCCCAAGTCACAGCCAGGTCCCAGTCACAGTGGTCCACTGCTTTGAGGTTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | GGATGCAGACGCAAAATGTGTCAACTCCTGGAAGGTGAACAGGATTaGATAGTCGTCACAAACACACACCGTGTCCCCTCACCTTACCCA | + |
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Preference number: 1 (lower is better) Translates to: GCRRKMCQLLEGEQD*IVVTNTHRVPSPYP Trigger: TGGGTAAGGTGAGGGGACACGGTGTGTGTTTGTGACGACTATTCAATCCTGTTCACCTTCCAGGAGTTGACACATTTTGCGTCTGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR TCA 90 bp | CACTGTGACTGGGACCTGGCTGTGACTTGGGACCTCCTATCTTCATaGGGACAGAAAGAATGGGAACTTGTAAACACAAGGAAAGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: HCDWDLAVTWDLLSS*GQKEWELVNTRKGL Trigger: TAGCCCTTTCCTTGTGTTTACAAGTTCCCATTCTTTCTGTCCTCATGAAGATAGGAGGTCCCAAGTCACAGCCAGGTCCCAGTCACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CCA 90 bp | CTGTGCTCATCAAAAGCCAAAGTGAATATAAAGAAACCTGGACTCTaGTGTGATCTTTTGTCCTCAGCGACCCGTGTCCCACTCTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LCSSKAKVNIKKPGL*CDLLSSATRVPLSL Trigger: AAGGGAGAGTGGGACACGGGTCGCTGAGGACAAAAGATCACACCAGAGTCCAGGTTTCTTTATATTCACTTTGGCTTTTGATGAGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | TCACCTTACCCAGAACTGGAAAGGCAGAAGGCATGGTCTTTATTATaGATCGCGGCATCAGTATATATTTTGTTCAGTGCCTGTATATCA | + |
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Preference number: 1 (lower is better) Translates to: SPYPELERQKAWSLL*IAASVYILFSACIS Trigger: TGATATACAGGCACTGAACAAAATATATACTGATGCCGCGATGCATAATAAAGACCATGCCTTCTGCCTTTCCAGTTCTGGGTAAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR GCA 90 bp | GCCTGTATATCAGAAAACCTACGTGGCAATGAGTTCTTCATTCTGTaGTCATCAAAAGCCAAAGTGAATATAAAGAAACCTGGACTCTGG | + |
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Preference number: 1 (lower is better) Translates to: ACISENLRGNEFFIL*SSKAKVNIKKPGLW Trigger: CCAGAGTCCAGGTTTCTTTATATTCACTTTGGCTTTTGATGAGCACAGAATGAAGAACTCATTGCCACGTAGGTTTTCTGATATACAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR CAA 90 bp | GAGTGGCGGCTGGCCGTGTGCTTCCTGGCGGCATCCTCCATTCTGTaGGCCGGAGGACTAAGCCTCTTCCTCTCCTTCGTGTGGAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: EWRLAVCFLAASSIL*AGGLSLFLSFVWKW Trigger: CCACTTCCACACGAAGGAGAGGAAGAGGCTTAGTCCTCCGGCCAACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CAA 90 bp | CTGTGGCGGAACAACCACCTGCCCTTCGTGGGCATCATGATCCTCTaGGCCGCGGCCCTGTGCCTGATGTTCTACGCTCTCCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LWRNNHLPFVGIMIL*AAALCLMFYALLWK Trigger: CTTCCAGAGGAGAGCGTAGAACATCAGGCACAGGGCCGCGGCCAAGAGGATCATGATGCCCACGAAGGGCAGGTGGTTGTTCCGCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGTCCCAACTAACCGTGAGGCTTGCCCTTCACCCTCACACCTGCAAACCCAGCAGTGGACCACTGTaGCTGGGACCTGGCTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LPSQLTVRLALHPHTCKPSSGPL*LGPGCD Trigger: GTCACAGCCAGGTCCCAGTCACAGTGGTCCACTGCT...GGGTTTGCAGGTGTGAGGGTGAAGGGCAAGCCTCACGGTTAGTTGGGACGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR GCA 90 bp | GATGAGGGAGAGTGGCGGCTGGCCGTGTGCTTCCTGGCGGCATCCTCCATTCTGGGAACTGTGGGCAGTTaGCAGCCTGTTTGGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: DEGEWRLAVCFLAASSILGTVGS*QPVWLG Trigger: TCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCC...CAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCAGCGACCCGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGTTGCCAGCCTGTTTaGTTGGGAGGGTGGAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VLSDPCPTLPYRGQGGGPSCQPV*LGGWKL Trigger: AAGCTTCCACCCTCCCAACCAAACAGGCTGGCAACT...GGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACGGGTCGCTGAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGATCTCCAGCACAGCAGAGGGGACCACTCACTGTGCAGACGGGCTGTGGTGAGGGGTCCCTGGACCTaGCAGCAAACAGGAATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VDLQHSRGDHSLCRRAVVRGPWT*QQTGIS Trigger: GCTGATTCCTGTTTGCTGTCAGGTCCAGGGACCCCT...CACCACAGCCCGTCTGCACAGTGAGTGGTCCCCTCTGCTGTGCTGGAGATCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCTCACCAGCCTCACAGTCTAGGAGCAGGAGGCTCCTAGACTGGCAGGGAAAAGCCTGGTTTTCGTaGGTGGCAGGGGCCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: CGSPASQSRSRRLLDWQGKAWFS*VAGASR Trigger: CCTACTGGCCCCTGCCACCCACGAAAACCAGGCTTT...TCCCTGCCAGTCTAGGAGCCTCCTGCTCCTAGACTGTGAGGCTGGTGAGCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | CGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAGACTGGCAGGGAACTGTaGGCAGTTGCCAGCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: RVPLSLTGVKVEAPGGRETGREL*AVASLF Trigger: AAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGT...CTCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR CAA 90 bp | CTCCTAGACTGGCAGGGAACTGTGGGCAGTTGCCAGCCTGTTTGGTaGGGAGGGTGGAAGCTTACTGCTGGACTGTGTCGTGAGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: LLDWQGTVGSCQPVW*GGWKLTAGLCREGD Trigger: GTCTCCCTCACGACACAGTCCAGCAGTAAGCTTCCACCCTCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGTCTAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCGTCCCAACTAACCGTGAGGCTTGCCCTTCACCCTCACACCTGCAAACCCAAGTCCCACCCAAACTaGCAACCTCCTGGGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: LPSQLTVRLALHPHTCKPKSHPN*QPPGTG Trigger: TCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTT...GGGTTTGCAGGTGTGAGGGTGAAGGGCAAGCCTCACGGTTAGTTGGGACGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCAGCGACCCGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCTGCGTTTCTGCATCCTaGTACAGAAAAAGTCCCACC | + |
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Preference number: 2 (lower is better) Translates to: VLSDPCPTLPYRGQGGGPCVSAS*YRKSPT Trigger: GGTGGGACTTTTTCTGTAGCAGGATGCAGAAACGCA...GGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACGGGTCGCTGAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | AGACTGGCAGGGAACTGTGGGCAGTTGCCAGCCTGTTTGGTTGGGAGGGTGGAAAAAGCCTGGTTTTCGTaGGTGGCAGGGGCCAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: RLAGNCGQLPACLVGRVEKAWFS*VAGASR Trigger: CCTACTGGCCCCTGCCACCCACGAAAACCAGGCTTT...TTCCACCCTCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | AACTCGGGGCTGGGATTGCCATCCCTCAGGGCCCGAGGGTGGAGCAGGGAAAGTAAACTGACAACCTCCTaGGACTGGAAGTTGGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: NSGLGLPSLRARGWSRESKLTTS*DWKLGA Trigger: TGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTT...ACTTTCCCTGCTCCACCCTCGGGCCCTGAGGGATGGCAATCCCAGCCCCGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR TCA 90 bp | CCGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAACCTCACTTTTACTGTaGATGAAACTCGGGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PCPTLPYRGQGGGPRRKRTSLLL*MKLGAG Trigger: CCCAGCCCCGAGTTTCATTCACAGTAAAAGTGAGGT...TCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | CAAACCCACCTTTATGAGGACCTGAGACACTCTCAGAGAGCCCCCAACAGCCTGAGAGATGAGGGAGAGTaGCGGCTGGCCGTGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: QTHLYEDLRHSQRAPNSLRDEGE*RLAVCF Trigger: GAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCT...CAGGCTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTCCTCATAAAGGTGGGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCAGCAACTGAGCTTAGGCTCAGTCAAGCCTCGCGCACCTACCTCAAGCCAGGCTCGGTGTGTATaGAGCCCTGGTCCTCACAGT | + |
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Preference number: 2 (lower is better) Translates to: CQQQLSLGSVKPRAPTSSQARCV*SPGPHS Trigger: ACTGTGAGGACCAGGGCTCCATACACACCGAGCCTG...GCTTGAGGTAGGTGCGCGAGGCTTGACTGAGCCTAAGCTCAGTTGCTGCTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | AAACGGGGAAGGAGGCACAGGCCACTGATCCTTCACTCAGGCTCACATCCAACCCCAGCCTGCAGACACTaGGCTGACTGTCATGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: KRGRRHRPLILHSGSHPTPACRH*ADCHVA Trigger: GGCTACATGACAGTCAGCCCAGTGTCTGCAGGCTGG...GGTTGGATGTGAGCCTGAGTGAAGGATCAGTGGCCTGTGCCTCCTTCCCCGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR CAA 90 bp | GATCCTTCACTCAGGCTCACATCCAACCAACTGAGCCATAGAGCTTaGCTGACCACGCACACCCAGCCTGCAGACACTGGGCTGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: DPSLRLTSNQLSHRA*LTTHTQPADTGLTV Trigger: GACAGTCAGCCCAGTGTCTGCAGGCTGGGTGTGCGTGGTCAGCAAAGCTCTATGGCTCAGTTGGTTGGATGTGAGCCTGAGTGAAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR TCA 90 bp | CCGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGACCCACAGCTCTCAGCTaGAGCAGTGAACAATTCATA | + |
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Preference number: 2 (lower is better) Translates to: PCPTLPYRGQGGGPRRKRPTALS*SSEQFI Trigger: TATGAATTGTTCACTGCTTCAGCTGAGAGCTGTGGG...TCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTGCTGACCACGCACACCCAGCCTGCAGACACTGGGCTGACTGTCATGTAGGAACTGTGGGCAGTTaGCAGCCTGTTTGGTTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SFADHAHPACRHWADCHVGTVGS*QPVWLG Trigger: TCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCC...TACATGACAGTCAGCCCAGTGTCTGCAGGCTGGGTGTGCGTGGTCAGCAAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGCTTGGAGGGCTGGGGTACCTGCAGTTTCTTAGGGTACCATGTAGCTCAACTGGCAGGGAACTGTaGGCAGTTGCCAGCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: RRLGGLGYLQFLRVPCSSTGREL*AVASLF Trigger: AAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGT...TGAGCTACATGGTACCCTAAGAAACTGCAGGTACCCCAGCCCTCCAAGCCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTGCTGACCACGCACACCCAGCCTGCAGACACTGGGCTGACTGTCATGTAATAGTCCCAGGCAGGTaGGAGTCTGTCAGAGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SFADHAHPACRHWADCHVIVPGR*ESVRGQ Trigger: TTGGCCTCTGACAGACTCCCACCTGCCTGGGACTAT...TACATGACAGTCAGCCCAGTGTCTGCAGGCTGGGTGTGCGTGGTCAGCAAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTATTATGGGATTGCAAGGGTTCGGTTCCAACTGTGCTCCAAGAAGGTGCCAACCCAGAGGCGGCTTaGAGGGCTGGGGTACCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GLLWDCKGSVPTVLQEGANPEAA*RAGVPA Trigger: TGCAGGTACCCCAGCCCTCCAAGCCGCCTCTGGGTT...GGCACCTTCTTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCAGCAGCAACTGAGCTTAGGCTCAGTCAAGCCTCGCGCACCTACCTCAAGCTTCTACGCTCTCCTCTaGAAGGCTGGCAACCTCGCT | + |
|
Preference number: 2 (lower is better) Translates to: CQQQLSLGSVKPRAPTSSFYALL*KAGNLA Trigger: AGCGAGGTTGCCAGCCTTCCAGAGGAGAGCGTAGAA...GCTTGAGGTAGGTGCGCGAGGCTTGACTGAGCCTAAGCTCAGTTGCTGCTGACA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCGGCATCCTCCATTCTGTTGGCCGGAGGACTAAGCCTCTTCCTCTCCTTCCCCACAGCTCTCAGCTaGAGCAGTGAACAATTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LAASSILLAGGLSLFLSFPTALS*SSEQFI Trigger: TATGAATTGTTCACTGCTTCAGCTGAGAGCTGTGGG...GAAGGAGAGGAAGAGGCTTAGTCCTCCGGCCAACAGAATGGAGGATGCCGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAGGTGACTGGTGGTAGACACTTTTACTGTGAATaGAACTCGGGGCTGGGATTG | + |
|
Preference number: 2 (lower is better) Translates to: LTGVKVEAPGGREVTGGRHFYCE*NSGLGL Trigger: CAATCCCAGCCCCGAGTTTCATTCACAGTAAAAGTG...TCTACCACCAGTCACCTCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAACCCACCTTTATGAGGACCTGAGACACTCTCAGAGAGCCCCCAACAGCCTGGTTCGGTTCCAACTGTaGTCCAAGAAGGTGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: QTHLYEDLRHSQRAPNSLVRFQL*SKKVPE Trigger: CTCTGGCACCTTCTTGGAGCACAGTTGGAACCGAAC...CAGGCTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTCCTCATAAAGGTGGGTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CCA 90 bp | AAACGGGGAAGGAGGCACAGGCCACTGATCCTTCACTCAGGCTCACATCCAACCTACAACTTCTGTCTGTaGAAGGAGGACATGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KRGRRHRPLILHSGSHPTYNFCL*KEDMGS Trigger: GGAGCCCATGTCCTCCTTCCACAGACAGAAGTTGTA...GGTTGGATGTGAGCCTGAGTGAAGGATCAGTGGCCTGTGCCTCCTTCCCCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | CGGTGTGTATGGAGCCCTGGTCCTCACAGTGTTCGTCCCTCTGCCTCTCCTCCTAACAGGATGCGTTTCTaGATCCTGCTACAGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RCVWSPGPHSVRPSASPPNRMRF*ILLQKK Trigger: CTTTTTCTGTAGCAGGATGCAGAAACGCATCCTGTT...AGGAGGAGAGGCAGAGGGACGAACACTGTGAGGACCAGGGCTCCATACACACCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | CTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAGGTGACTGGTGGTAGAAAGTCTGTAACAGGATaGGTTTCTGCATCCTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: LTGVKVEAPGGREVTGGRKSVTG*VSASCY Trigger: GTAGCAGGATGCAGAAACGCATCCTGTTACAGACTT...TCTACCACCAGTCACCTCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTCGAGATCTGGCTGCCTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTAAGTCCCACCCAAACTaGCAACCTCCTGGGACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: SRDLAACLEYPCSRQLYFKSHPN*QPPGTG Trigger: TCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTT...AAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAGGCAGCCAGATCTCGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCTCACCTTACCCAGAACTGGAAAGGCAGAAGGCATGGTCTTTATTATGCATCACTGGCAGGGAACTGTaGGCAGTTGCCAGCCTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PSPYPELERQKAWSLLCITGREL*AVASLF Trigger: AAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGT...GATGCATAATAAAGACCATGCCTTCTGCCTTTCCAGTTCTGGGTAAGGTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTATTATGGGATTGCAAGGGTTCGGTTCCAACTGTGCTCCAAGAAGGTGCCCACTTTTACTGTGAATaGAACTCGGGGCTGGGATTG | + |
|
Preference number: 2 (lower is better) Translates to: GLLWDCKGSVPTVLQEGAHFYCE*NSGLGL Trigger: CAATCCCAGCCCCGAGTTTCATTCACAGTAAAAGTG...GGCACCTTCTTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGTAGGCCCAAGATGCGTTTCTGCATCCTaGTACAGAAAAAGTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: THVLGSSIFLCIWQVGPRCVSAS*YRKSPT Trigger: GGTGGGACTTTTTCTGTAGCAGGATGCAGAAACGCA...TCTTGGGCCTACTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGCCTGGGACTGGAAGTTaGGAGCAAAGCCTGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSRIPMFSAALFSFASGKPGTGS*EQSLVF Trigger: GAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGG...CTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTACAAAGGCTTATTATGGGATTGCAAGGGTTCGGTTCCAACTGTGCTCCAAGCCCACAGCTCTCAGCTaGAGCAGTGAACAATTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LTKAYYGIARVRFQLCSKPTALS*SSEQFI Trigger: TATGAATTGTTCACTGCTTCAGCTGAGAGCTGTGGG...CTTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCCTTTGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGTGCGTTTCTGCATCCTaGTACAGAAAAAGTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: LSRIPMFSAALFSFASGKCVSAS*YRKSPT Trigger: GGTGGGACTTTTTCTGTAGCAGGATGCAGAAACGCA...CTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | ACCTTACCCAGAACTGGAAAGGCAGAAGGCATGGTCTTTATTATGCATCGCGGCAACAGGATGCGTTTCTaGATCCTGCTACAGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: TLPRTGKAEGMVFIMHRGNRMRF*ILLQKK Trigger: CTTTTTCTGTAGCAGGATGCAGAAACGCATCCTGTT...GCCGCGATGCATAATAAAGACCATGCCTTCTGCCTTTCCAGTTCTGGGTAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGTCGAGATCTGGCTGCCTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTAAGTCTGTAACAGGATaGGTTTCTGCATCCTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: KSRSGCLSRIPMFSAALFKSVTG*VSASCY Trigger: GTAGCAGGATGCAGAAACGCATCCTGTTACAGACTT...AAATAGAGCTGCCGAGAACATGGGTATTCTAGACAGGCAGCCAGATCTCGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTCGAGATCTGGCTGCCTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTAAGTCTGTAACAGGATaGGTTTCTGCATCCTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SRDLAACLEYPCSRQLYFKSVTG*VSASCY Trigger: GTAGCAGGATGCAGAAACGCATCCTGTTACAGACTT...AAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAGGCAGCCAGATCTCGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGTCATCTAAGTGGTTGTCAGCAGCAACTGAGCTTAGGCTCAGTCAAGCCTTGGCAACAAATGGGATaGTTAGGGGAAAAACAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CSHLSGCQQQLSLGSVKPWQQMG*LGEKQK Trigger: TTTTTGTTTTTCCCCTAATCATCCCATTTGTTGCCA...AGGCTTGACTGAGCCTAAGCTCAGTTGCTGCTGACAACCACTTAGATGACTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCATCAAAAGCCAAAGTGAATATAAAGAAACCTGGACTCTGGTGTGATCTTCCTGGGACTGGAAGTTaGGAGCAAAGCCTGGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CSSKAKVNIKKPGLWCDLPGTGS*EQSLVF Trigger: GAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGG...AAGATCACACCAGAGTCCAGGTTTCTTTATATTCACTTTGGCTTTTGATGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 90 bp | CAGAAGGCATGGTCTTTATTATGCATCGCGGCATCAGTATATATTTaGTTCAGTGCCTGTATATCAGAAAACCTACGTGGCAATGAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QKAWSLLCIAASVYI*FSACISENLRGNEF Trigger: GAACTCATTGCCACGTAGGTTTTCTGATATACAGGCACTGAACAAAATATATACTGATGCCGCGATGCATAATAAAGACCATGCCTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | CCCTCTGCCTCTCCTCCTTGCCCAGTACAACAGAGATaGGGGAGAGTGGCGGCTGGCCGTGTGCTTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSASPPCPVQQR*GRVAAGRVLPG Trigger: GCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAAGGAGGAGAGGCAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | CTCCTCCTTGCCCAGTACAACAGAGATGAGGGAGAGTaGCGGCTGGCCGTGTGCTTCCTGGCGGCATCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLAQYNRDEGE*RLAVCFLAASS Trigger: GGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAAGGAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | GCCGCGGCCCTGTGCCTGATGTTCTACGCTCTCCTCTaGAAGGCTGGCAACCTCGCTGACCTACCTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AAALCLMFYALL*KAGNLADLPSL Trigger: CAGGCTAGGTAGGTCAGCGAGGTTGCCAGCCTTCCAGAGGAGAGCGTAGAACATCAGGCACAGGGCCGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | TCAGGTTGGACTAGCCCTGGCCAGGCTCGGTGTGTATaGAGCCCTGGTCCTCACAGTGTTCGTCCCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SGWTSPGQARCV*SPGPHSVRPSA Trigger: GGCAGAGGGACGAACACTGTGAGGACCAGGGCTCCATACACACCGAGCCTGGCCAGGGCTAGTCCAACCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | GTTGATCTCCAGCACAGCAGAGGGGACCACTCACTGTaGAGACGGGCTGTGGTGTCAAGGAACCCAGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: VDLQHSRGDHSL*RRAVVSRNPEA Trigger: CGCCTCTGGGTTCCTTGACACCACAGCCCGTCTGCACAGTGAGTGGTCCCCTCTGCTGTGCTGGAGATCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | TACAACAGAGATGAGGGAGAGTGGCGGCTGGCCGTGTaGTTCCTGGCGGCATCCTCCATTCTGTTGGCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: YNRDEGEWRLAV*FLAASSILLAG Trigger: TCCGGCCAACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | CCAGCCTCACAGTCTAGGAGCAGGAGGCTCCTAGACTaGCAGGGAACTGTGGGCAGTTGCCAGCCTGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: PASQSRSRRLLD*QGTVGSCQPVW Trigger: CCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGTCTAGGAGCCTCCTGCTCCTAGACTGTGAGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCAGGCAGGTGGGAGTCTGTCAGAGGCCAAACTTCCAAGCTATCTTGGCAAAACTCGGGGCTGGGATaGCCATCCCTCAGGGCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: VPGRWESVRGQTSKLSWQNSGLG*PSLRAR Trigger: TCGGGCCCTGAGGGATGGCAATCCCAGCCCCGAGTT...TTGCCAAGATAGCTTGGAAGTTTGGCCTCTGACAGACTCCCACCTGCCTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | TTGCCCAGTACAACAGAGATGAGGGAGAGTGGCGGCTaGCCGTGTGCTTCCTGGCGGCATCCTCCATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSTTEMRESGG*PCASWRHPPFC Trigger: ACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAGCCGCCACTCTCCCTCATCTCTGTTGTACTGGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | GTTGATCTCCAGCACAGCAGAGGGGACCACTCACTGTGCAGACGGGCTGTGGTGTCCTGGGACTGGAAGTaGGGAGCAAAGCCTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: VDLQHSRGDHSLCRRAVVSWDWK*GAKPGF Trigger: AAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGA...CACCACAGCCCGTCTGCACAGTGAGTGGTCCCCTCTGCTGTGCTGGAGATCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | CCGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGACAGCTCTATTTTCCTTaGCATCTGGCAAGTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PCPTLPYRGQGGGPRRKRQLYFP*HLASRP Trigger: GGGCCTACTTGCCAGATGCAAAGGAAAATAGAGCTG...TCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACGGGGAAGGAGGCACAGGCCACTGATCCTTCACTCAGGCTCACATCCAACCCAGTTGCCAGCCTGTTaGGTTGGGAGGGTGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KRGRRHRPLILHSGSHPTQLPAC*VGRVEA Trigger: AGCTTCCACCCTCCCAACCAAACAGGCTGGCAACTG...GGTTGGATGTGAGCCTGAGTGAAGGATCAGTGGCCTGTGCCTCCTTCCCCGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | AGGAGGCTCCTAGACTGGCAGGGAACTGTGGGCAGTTaGCAGCCTGTTTGGTTGGGAGGGTGGAAGCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RRLLDWQGTVGS*QPVWLGGWKLT Trigger: AGTAAGCTTCCACCCTCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGTCTAGGAGCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | GACCTGAGACACTCTCAGAGAGCCCCCAACAGCCTGTaGTATCCATGCTGCGGGAAAGCCCTTTACCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DLRHSQRAPNSL*YPCCGKALYLR Trigger: CCTCAGGTAAAGGGCTTTCCCGCAGCATGGATATCACAGGCTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | ATATCCATGCTGCGGGAAAGCCCTTTACCTGAGGGCTaGGGCTCAGGATACTTCAGGTTTCCACAGCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ISMLRESPLPEG*GSGYFRFPQLP Trigger: GGGCAGCTGTGGAAACCTGAAGTATCCTGAGCCGCAGCCCTCAGGTAAAGGGCTTTCCCGCAGCATGGATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | CAAGACCTCACTTTTACTGTGAATGAAACTCGGGGCTaGGATTGCCATCCCTCAGGGCCCGAGGGTGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QDLTFTVNETRG*DCHPSGPEGGA Trigger: TGCTCCACCCTCGGGCCCTGAGGGATGGCAATCCCAGCCCCGAGTTTCATTCACAGTAAAAGTGAGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | CACCCTCACACCTGCAAACCCACCTTTATGAGGACCTaGGACACTCTCAGAGAGCCCCCAACAGCCTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HPHTCKPTFMRT*DTLREPPTACD Trigger: ATCACAGGCTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTCCTCATAAAGGTGGGTTTGCAGGTGTGAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | TTGCCCTTCACCCTCACACCTGCAAACCCACCTTTATaGGGACCTGAGACACTCTCAGAGAGCCCCCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LPFTLTPANPPL*GPETLSESPQQ Trigger: CTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTCCTCATAAAGGTGGGTTTGCAGGTGTGAGGGTGAAGGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | GGCCCGAGGGTGGAGCAGGGAAAGTCTGTAACAGGATaGGTTTCTGCATCCTGCTACAGAAAAAGTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GPRVEQGKSVTG*VSASCYRKSPT Trigger: GGTGGGACTTTTTCTGTAGCAGGATGCAGAAACGCATCCTGTTACAGACTTTCCCTGCTCCACCCTCGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | AGGGCTGCGGCTCAGGATACTTCAGGTTTCCACAGCTaGCCAGTTCCTTCTAACCTCAAAGCAGTGGACCAC | + |
|
Preference number: 3 (lower is better) Translates to: RAAAQDTSGFHS*PVPSNLKAVDH Trigger: GTGGTCCACTGCTTTGAGGTTAGAAGGAACTGGGCAGCTGTGGAAACCTGAAGTATCCTGAGCCGCAGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGAACTCGGGGCTGGGATaGCCATCCCTCAGGGCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LSRIPMFSAALFSFASGKNSGLG*PSLRAR Trigger: TCGGGCCCTGAGGGATGGCAATCCCAGCCCCGAGTT...CTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAGCAGCAACTGAGCTTAGGCTCAGTCAAGCCTCGCGCACCTACCTCAAGCCTGTTACTCATCTTCTaGCTTGTGGCCACGGTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQQQLSLGSVKPRAPTSSLLLIF*LVATVR Trigger: CCTAACCGTGGCCACAAGCAAGAAGATGAGTAACAG...GCTTGAGGTAGGTGCGCGAGGCTTGACTGAGCCTAAGCTCAGTTGCTGCTGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | TCTGGAAGGCTGGCAACCTCGCTGACCTACCTAGCCTaGGAATCGGCTTCTACAACTTCTGTCTGTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGRLATSLTYLA*ESASTTSVCGR Trigger: CCTTCCACAGACAGAAGTTGTAGAAGCCGATTCTCAGGCTAGGTAGGTCAGCGAGGTTGCCAGCCTTCCAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTGCTGACCACGCACACCCAGCCTGCAGACACTGGGCTGACTGTCATGTACAGTCATCTAAGTGGTaGTCAGCAGCAACTGAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SFADHAHPACRHWADCHVQSSKW*SAATEL Trigger: AAGCTCAGTTGCTGCTGACAACCACTTAGATGACTG...TACATGACAGTCAGCCCAGTGTCTGCAGGCTGGGTGTGCGTGGTCAGCAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | TCAAAGCAGTGGACCACTGTGACTGGGACCTGGCTGTaGCTTGGGACCTCCTATCTTCATGAGGACAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SKQWTTVTGTWL*LGTSYLHEDRK Trigger: CTTTCTGTCCTCATGAAGATAGGAGGTCCCAAGTCACAGCCAGGTCCCAGTCACAGTGGTCCACTGCTTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | GCTACAGAAAAAGTCCCACCCAAACTGACAACCTCCTaGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGT | + |
|
Preference number: 3 (lower is better) Translates to: ATEKVPPKLTTS*DWKLGAKPGFR Trigger: ACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCTGTAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | CTCATTAGCACAGGGATTCCTATAGTCCCAGGCAGGTaGGAGTCTGTCAGAGGCCAAACTTCCAAGCTATCT | + |
|
Preference number: 3 (lower is better) Translates to: LISTGIPIVPGR*ESVRGQTSKLS Trigger: AGATAGCTTGGAAGTTTGGCCTCTGACAGACTCCCACCTGCCTGGGACTATAGGAATCCCTGTGCTAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | CCTAGCCTGAGAATCGGCTTCTACAACTTCTGTCTGTaGAAGGAGGACATGGGCTCCCTAGCATGTTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: PSLRIGFYNFCL*KEDMGSLACYN Trigger: GTTGTAACATGCTAGGGAGCCCATGTCCTCCTTCCACAGACAGAAGTTGTAGAAGCCGATTCTCAGGCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTCGAGATCTGGCTGCCTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTTCCTGGGACTGGAAGTaGGGAGCAAAGCCTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SRDLAACLEYPCSRQLYFSWDWK*GAKPGF Trigger: AAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGA...AAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAGGCAGCCAGATCTCGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCACCTTACCCAGAACTGGAAAGGCAGAAGGCATGGTCTTTATTATGCATCCAGCTCTATTTTCCTTaGCATCTGGCAAGTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSPYPELERQKAWSLLCIQLYFP*HLASRP Trigger: GGGCCTACTTGCCAGATGCAAAGGAAAATAGAGCTG...GATGCATAATAAAGACCATGCCTTCTGCCTTTCCAGTTCTGGGTAAGGTGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | CGCAAAATGTGTCAACTCCTGGAAGGTGAACAGGATTaGATAGTCGTCACAAACACACACCGTGTCCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RKMCQLLEGEQD*IVVTNTHRVPS Trigger: TGAGGGGACACGGTGTGTGTTTGTGACGACTATTCAATCCTGTTCACCTTCCAGGAGTTGACACATTTTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | GGGATGCAGACGCAAAATGTGTCAACTCCTGGAAGGTaGACAGGATTGAATAGTCGTCACAAACACACACCG | + |
|
Preference number: 3 (lower is better) Translates to: GMQTQNVSTPGR*TGLNSRHKHTP Trigger: CGGTGTGTGTTTGTGACGACTATTCAATCCTGTTCACCTTCCAGGAGTTGACACATTTTGCGTCTGCATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | TGGGACCTGGCTGTGACTTGGGACCTCCTATCTTCATaGGGACAGAAAGAATGGGAACTTGTAAACACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: WDLAVTWDLLSS*GQKEWELVNTR Trigger: CCTTGTGTTTACAAGTTCCCATTCTTTCTGTCCTCATGAAGATAGGAGGTCCCAAGTCACAGCCAGGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | CAGGGAAAGTCTGTAACAGGATGCGTTTCTGCATCCTaGTACAGAAAAAGTCCCACCCAAACTGACAACCTC | + |
|
Preference number: 3 (lower is better) Translates to: QGKSVTGCVSAS*YRKSPTQTDNL Trigger: GAGGTTGTCAGTTTGGGTGGGACTTTTTCTGTAGCAGGATGCAGAAACGCATCCTGTTACAGACTTTCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGTTCCTGGGACTGGAAGTaGGGAGCAAAGCCTGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLEYPCSRQLYFPLHLASSWDWK*GAKPGF Trigger: AAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGA...ACTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | GAACTTGTAAACACAAGGAAAGGGCTAGATATTCACTaGTGTGACCTTTTCCAGGTCTCCCTGCAACAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELVNTRKGLDIH*CDLFQVSLQQQ Trigger: CTGCTGTTGCAGGGAGACCTGGAAAAGGTCACAGCAGTGAATATCTAGCCCTTTCCTTGTGTTTACAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | GGAGAACTGTTAGTCCGGTCTTACAAAGGCTTATTATaGGATTGCAAGGGTTCGGTTCCAACTGTGCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GELLVRSYKGLL*DCKGSVPTVLQ Trigger: TTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCCTTTGTAAGACCGGACTAACAGTTCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGGCAGAAGGCATGGTCTTTATTATGCATCGCGGCATCAGTATATATTTTGTTCTCTGGTGTGATCTTTaGTCCTCAGCGACCCGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KAEGMVFIMHRGISIYFVLWCDL*SSATRV Trigger: GACACGGGTCGCTGAGGACAAAAGATCACACCAGAG...AACAAAATATATACTGATGCCGCGATGCATAATAAAGACCATGCCTTCTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR TCA 72 bp | TGTAAACACAAGGAAAGGGCTAGATATTCACTGCTGTaGCCTTTTCCAGGTCTCCCTGCAACAGCAGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CKHKERARYSLL*PFPGLPATAED Trigger: ATCTTCTGCTGTTGCAGGGAGACCTGGAAAAGGTCACAGCAGTGAATATCTAGCCCTTTCCTTGTGTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | TCAAAAGCCAAAGTGAATATAAAGAAACCTGGACTCTaGTGTGATCTTTTGTCCTCAGCGACCCGTGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SKAKVNIKKPGL*CDLLSSATRVP Trigger: TGGGACACGGGTCGCTGAGGACAAAAGATCACACCAGAGTCCAGGTTTCTTTATATTCACTTTGGCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | CCAGAACTGGAAAGGCAGAAGGCATGGTCTTTATTATaGATCGCGGCATCAGTATATATTTTGTTCAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PELERQKAWSLL*IAASVYILFSA Trigger: GGCACTGAACAAAATATATACTGATGCCGCGATGCATAATAAAGACCATGCCTTCTGCCTTTCCAGTTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CCA 72 bp | TGGGAGTCTGTCAGAGGCCAAACTTCCAAGCTATCTTaGCAAAGTGTCAAACTAGAACTCTGTGATGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: WESVRGQTSKLS*QSVKLELCDGY Trigger: ATAACCATCACAGAGTTCTAGTTTGACACTTTGCCAAGATAGCTTGGAAGTTTGGCCTCTGACAGACTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCATCAAAAGCCAAAGTGAATATAAAGAAACCTGGACTCTGGTGTGATCTTCAGCTCTATTTTCCTTaGCATCTGGCAAGTAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSSKAKVNIKKPGLWCDLQLYFP*HLASRP Trigger: GGGCCTACTTGCCAGATGCAAAGGAAAATAGAGCTG...AAGATCACACCAGAGTCCAGGTTTCTTTATATTCACTTTGGCTTTTGATGAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR GCA 72 bp | TCAGAAAACCTACGTGGCAATGAGTTCTTCATTCTGTaGTCATCAAAAGCCAAAGTGAATATAAAGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: SENLRGNEFFIL*SSKAKVNIKKP Trigger: AGGTTTCTTTATATTCACTTTGGCTTTTGATGAGCACAGAATGAAGAACTCATTGCCACGTAGGTTTTCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTGGCAGGGGCCAGTAGGGGTGGGCAGCACCCACAGCTCTCAGCTGAAGCAGTCCCCGGGGAGGGCTaGGGCCTGGAGCAAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVAGASRGGQHPQLSAEAVPGEG*GLEQES Trigger: GCTCTCTTGCTCCAGGCCTCAGCCCTCCCCGGGGAC...TGCTTCAGCTGAGAGCTGTGGGTGCTGCCCACCCCTACTGGCCCCTGCCACCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGCAGGGGCCAGTAGGGGTGGGCAGCACCCACAGCTCTCAGCTGAAGCATGGGGCTCTTGTTGCTaGCCCCACTCTCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVAGASRGGQHPQLSAEAWGSCC*PHSLGP Trigger: TGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCA...TGCTTCAGCTGAGAGCTGTGGGTGCTGCCCACCCCTACTGGCCCCTGCCACCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCAGACGGGCTGTGGTGTCAAGGAACCCAGAGGCGGCTTGGAGGGCTGGGTGTCTTCTTCCTCACTaGTGCTCCCGGGGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCRRAVVSRNPEAAWRAGCLLPH*CSRGTR Trigger: CCTCGTCCCCCGGGAGCAGCAGTGAGGAAGAAGACA...CCCAGCCCTCCAAGCCGCCTCTGGGTTCCTTGACACCACAGCCCGTCTGCACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | GTCCTCAGCGACCCGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCCCTCCTCCGGGCTTCTaGTACAGGGAGAGTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLSDPCPTLPYRGQGGGPPPPGF*YRESPK Trigger: CTTCGGACTCTCCCTGTAGCAGAAGCCCGGAGGAGG...GGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACGGGTCGCTGAGGAC 64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCAGGGGCCAGTAGGGGTGGGCAGCACCCACAGCTCTCAGCTGAAGCAGGGAGGGCTGAGGCCTaGAGCAAGAGAGCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: WVAGASRGGQHPQLSAEAGRAEA*SKRADP Trigger: AGGATCAGCTCTCTTGCTCCAGGCCTCAGCCCTCCC...TGCTTCAGCTGAGAGCTGTGGGTGCTGCCCACCCCTACTGGCCCCTGCCACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | TGTCAGCAGCAACTGAGCTTAGGCTCAGTCAAGCCTCGCGCACCTACCTCAAGCGCTGCCCCCACTCTCTaGGCCCAGGCGGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CQQQLSLGSVKPRAPTSSAAPTL*AQAAVC Trigger: GCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGC...GCTTGAGGTAGGTGCGCGAGGCTTGACTGAGCCTAAGCTCAGTTGCTGCTGACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGTGGGTGGCAGGGGCCATGGGGCTCTTGTTGCTaGCCCCACTCTCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWDWKLGAKPGFRGWQGPWGSCC*PHSLGP Trigger: TGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCA...TGGCCCCTGCCACCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | CGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAGCTTCTTCCTCACTGCTaGTCCCGGGGGACGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVPLSLTGVKVEAPGGRELLPHC*SRGTRN Trigger: GTTCCTCGTCCCCCGGGAGCAGCAGTGAGGAAGAAG...CTCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | CGTGTCCCACTCTCCCTTACAGGGGTCAAGGTGGAGGCCCCAGGAGGAAGAGAGTGTCTTCTTCCTCACTaGTGCTCCCGGGGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RVPLSLTGVKVEAPGGRECLLPH*CSRGTR Trigger: CCTCGTCCCCCGGGAGCAGCAGTGAGGAAGAAGACA...CTCTCTTCCTCCTGGGGCCTCCACCTTGACCCCTGTAAGGGAGAGTGGGACACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCCAGCTCTATGCCTAGCCCAGCTGTTACTCATCTTCTTGCTTGTGGCCACGTCCCCGGGGAGGGCTaGGGCCTGGAGCAAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LASSMPSPAVTHLLACGHVPGEG*GLEQES Trigger: GCTCTCTTGCTCCAGGCCTCAGCCCTCCCCGGGGAC...GTGGCCACAAGCAAGAAGATGAGTAACAGCTGGGCTAGGCATAGAGCTGGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCACAGTCTAGGAGCAGGAGGCTCCTAGACTGGCAGGGAACTGTGGGCAGTCAGGGAGGGGAGAGCTaGAGCTTATCAGTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASQSRSRRLLDWQGTVGSQGGES*SLSVAS Trigger: GGAGGCCACTGATAAGCTGCAGCTCTCCCCTCCCTG...ACTGCCCACAGTTCCCTGCCAGTCTAGGAGCCTCCTGCTCCTAGACTGTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | TCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGTGGGTGGCAGGGGCCACAGGGAGGGGAGAGCTaGAGCTTATCAGTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWDWKLGAKPGFRGWQGPQGGES*SLSVAS Trigger: GGAGGCCACTGATAAGCTGCAGCTCTCCCCTCCCTG...TGGCCCCTGCCACCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | CTGGCCGTGTGCTTCCTGGCGGCATCCTCCATTCTGTaGGCCGGAGGACTAAGCCTCTTCCTCTCCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LAVCFLAASSIL*AGGLSLFLSFV Trigger: CACGAAGGAGAGGAAGAGGCTTAGTCCTCCGGCCAACAGAATGGAGGATGCCGCCAGGAAGCACACGGCCAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCTACAGAAAAAGTCCCACCCAAACTGACAACCTCCTGGGACTGGAAGGCTGCCCCCACTCTCTaGGCCCAGGCGGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HPATEKVPPKLTTSWDWKAAPTL*AQAAVC Trigger: GCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGC...CTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCTGTAGCAGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | GTCCCACCCAAACTGACAACCTCCTGGGACTGGAAGTaGGGAGCAAAGCCTGGTTTTCGTGGGTGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPPKLTTSWDWK*GAKPGFRGWQG Trigger: CCCCTGCCACCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | AACAACCACCTGCCCTTCGTGGGCATCATGATCCTCTaGGCCGCGGCCCTGTGCCTGATGTTCTACGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NNHLPFVGIMIL*AAALCLMFYAL Trigger: GAGAGCGTAGAACATCAGGCACAGGGCCGCGGCCAAGAGGATCATGATGCCCACGAAGGGCAGGTGGTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR TCA 90 bp | ACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGTAGGCCCAAGAGTCCCCGGGGAGGGCTaGGGCCTGGAGCAAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: THVLGSSIFLCIWQVGPRVPGEG*GLEQES Trigger: GCTCTCTTGCTCCAGGCCTCAGCCCTCCCCGGGGAC...TCTTGGGCCTACTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | AAACGGGGAAGGAGGCACAGGCCACTGATCCTTCACTCAGGCTCACATCCAACCCAGGGAGGGGAGAGCTaGAGCTTATCAGTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRGRRHRPLILHSGSHPTQGGES*SLSVAS Trigger: GGAGGCCACTGATAAGCTGCAGCTCTCCCCTCCCTG...GGTTGGATGTGAGCCTGAGTGAAGGATCAGTGGCCTGTGCCTCCTTCCCCGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | ACAACCTCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGTGGGTGGCAGCTTCTTCCTCACTGCTaGTCCCGGGGGACGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TTSWDWKLGAKPGFRGWQLLPHC*SRGTRN Trigger: GTTCCTCGTCCCCCGGGAGCAGCAGTGAGGAAGAAG...CTGCCACCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | CTGTGCAGACGGGCTGTGGTGTCAAGGAACCCAGAGGCGGCTTGGAGGGCTGGGGGAGGACCCTCGTTTTaGTCTTGGATTTTAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRRAVVSRNPEAAWRAGGGPSF*SWILGF Trigger: AAACCCTAAAATCCAAGACCAAAACGAGGGTCCTCC...CCCAGCCCTCCAAGCCGCCTCTGGGTTCCTTGACACCACAGCCCGTCTGCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCGAGATCTGGCTGCCTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTGCTGCCCCCACTCTCTaGGCCCAGGCGGCTGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRSGCLSRIPMFSAALFAAPTL*AQAAVC Trigger: GCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGC...AAATAGAGCTGCCGAGAACATGGGTATTCTAGACAGGCAGCCAGATCTCGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | CAAACCCACCTTTATGAGGACCTGAGACACTCTCAGAGAGCCCCCAACAGCCTGGGGAGGGCTGAGGCCTaGAGCAAGAGAGCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTHLYEDLRHSQRAPNSLGRAEA*SKRADP Trigger: AGGATCAGCTCTCTTGCTCCAGGCCTCAGCCCTCCC...CAGGCTGTTGGGGGCTCTCTGAGAGTGTCTCAGGTCCTCATAAAGGTGGGTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | TGGCAGGGAACTGTGGGCAGTTGCCAGCCTGTTTGGTaGGGAGGGTGGAAGCTTACTGCTGGACTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WQGTVGSCQPVW*GGWKLTAGLCR Trigger: ACGACACAGTCCAGCAGTAAGCTTCCACCCTCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | AGACTGGCAGGGAACTGTGGGCAGTTGCCAGCCTGTTaGGTTGGGAGGGTGGAAGCTTACTGCTGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLAGNCGQLPAC*VGRVEAYCWTV Trigger: CACAGTCCAGCAGTAAGCTTCCACCCTCCCAACCAAACAGGCTGGCAACTGCCCACAGTTCCCTGCCAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | CTCAGGCTCACATCCAACCAACTGAGCCATAGAGCTTaGCTGACCACGCACACCCAGCCTGCAGACACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLTSNQLSHRA*LTTHTQPADTG Trigger: CCCAGTGTCTGCAGGCTGGGTGTGCGTGGTCAGCAAAGCTCTATGGCTCAGTTGGTTGGATGTGAGCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | CATCCTGCTACAGAAAAAGTCCCACCCAAACTGACAACCTCCTGGGACTGGAAGTGGGGCTCTTGTTGCTaGCCCCACTCTCTGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPATEKVPPKLTTSWDWKWGSCC*PHSLGP Trigger: TGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCA...CTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCTGTAGCAGGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | CCAGCTCTATGCCTAGCCCAGCTGTTACTCATCTTCTaGCTTGTGGCCACGGTTAGGTTCCCGCCACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PALCLAQLLLIF*LVATVRFPPRD Trigger: ATCCCGTGGCGGGAACCTAACCGTGGCCACAAGCAAGAAGATGAGTAACAGCTGGGCTAGGCATAGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | GGCTTATTATGGGATTGCAAGGGTTCGGTTCCAACTGTGCTCCAAGAAGGTGCCCCTCCTCCGGGCTTCTaGTACAGGGAGAGTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLWDCKGSVPTVLQEGAPPPGF*YRESPK Trigger: CTTCGGACTCTCCCTGTAGCAGAAGCCCGGAGGAGG...GGCACCTTCTTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | AGAAAAAGTCCCACCCAAACTGACAACCTCCTGGGACTGGAAGTTGGGAGCAAAAGGGCTTTTCCTGTTTaGGGCCCAGGAGCGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKSPTQTDNLLGLEVGSKRAFPV*GPGAGD Trigger: GTCCCCCGCTCCTGGGCCGCAAACAGGAAAAGCCCT...TTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000115006.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGTGGGAGTCTGTCAGAGGCCAAACTTCCAAGCTATCTTGGCAAAGTGTGGGAGGGCTGAGGCCTaGAGCAAGAGAGCTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQVGVCQRPNFQAILAKCGRAEA*SKRADP Trigger: AGGATCAGCTCTCTTGCTCCAGGCCTCAGCCCTCCC...ACACTTTGCCAAGATAGCTTGGAAGTTTGGCCTCTGACAGACTCCCACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCACAGTCTAGGAGCAGGAGGCTCCTAGACTGGCAGGGAACTGTGGGCAGTGGAGGACCCTCGTTTTaGTCTTGGATTTTAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASQSRSRRLLDWQGTVGSGGPSF*SWILGF Trigger: AAACCCTAAAATCCAAGACCAAAACGAGGGTCCTCC...ACTGCCCACAGTTCCCTGCCAGTCTAGGAGCCTCCTGCTCCTAGACTGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCGAGATCTGGCTGCCTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTCTTCTTCCTCACTGCTaGTCCCGGGGGACGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSRSGCLSRIPMFSAALFLLPHC*SRGTRN Trigger: GTTCCTCGTCCCCCGGGAGCAGCAGTGAGGAAGAAG...AAATAGAGCTGCCGAGAACATGGGTATTCTAGACAGGCAGCCAGATCTCGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | GACCTCACTTTTACTGTGAATGAAACTCGGGGCTGGGATTGCCATCCCTCAGGGAATCAGGATCCCCAGTaGCACGTCTACCATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLTFTVNETRGWDCHPSGNQDPQ*HVYHFS Trigger: GCTGAAATGGTAGACGTGGCACTGGGGATCCTGATT...CCCTGAGGGATGGCAATCCCAGCCCCGAGTTTCATTCACAGTAAAAGTGAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGTTGTCTTCTTCCTCACTaGTGCTCCCGGGGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLEYPCSRQLYFPLHLASCLLPH*CSRGTR Trigger: CCTCGTCCCCCGGGAGCAGCAGTGAGGAAGAAGACA...ACTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | CCCACCCAAACTGACAACCTCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTGGAGGACCCTCGTTTTaGTCTTGGATTTTAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTQTDNLLGLEVGSKAWFGGPSF*SWILGF Trigger: AAACCCTAAAATCCAAGACCAAAACGAGGGTCCTCC...AAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCTACAGAAAAAGTCCCACCCAAACTGACAACCTCCTGGGACTGGAAGCTGTCTGCTTCCTTGTaGCTGTCTTCACTGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: HPATEKVPPKLTTSWDWKLSASL*LSSLIQ Trigger: TTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAG...CTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCTGTAGCAGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGAATCAGGATCCCCAGTaGCACGTCTACCATTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSRIPMFSAALFSFASGKNQDPQ*HVYHFS Trigger: GCTGAAATGGTAGACGTGGCACTGGGGATCCTGATT...CTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCATCAAAAGCCAAAGTGAATATAAAGAAACCTGGACTCTGGTGTGATCTTCCTCCTCCGGGCTTCTaGTACAGGGAGAGTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSSKAKVNIKKPGLWCDLPPPGF*YRESPK Trigger: CTTCGGACTCTCCCTGTAGCAGAAGCCCGGAGGAGG...AAGATCACACCAGAGTCCAGGTTTCTTTATATTCACTTTGGCTTTTGATGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | ACTGTTAGTCCGGTCTTACAAAGGCTTATTATGGGATaGCAAGGGTTCGGTTCCAACTGTGCTCCAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVSPVLQRLIMG*QGFGSNCAPRR Trigger: CCTTCTTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCCTTTGTAAGACCGGACTAACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS-3UTR CCA 90 bp | CTTACAAAGGCTTATTATGGGATTGCAAGGGTTCGGTTCCAACTGTGCTCCAAGCTGTCTGCTTCCTTGTaGCTGTCTTCACTGATACAA | + |
|
Preference number: 4 (lower is better) Translates to: LTKAYYGIARVRFQLCSKLSASL*LSSLIQ Trigger: TTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAG...CTTGGAGCACAGTTGGAACCGAACCCTTGCAATCCCATAATAAGCCTTTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | CTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTaGCATCTGGCAAGTAGGCCCAAGACCTCACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LEYPCSRQLYFP*HLASRPKTSLL Trigger: TAAAAGTGAGGTCTTGGGCCTACTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| 3UTR CAA 72 bp | TGGTCTTTATTATGCATCGCGGCATCAGTATATATTTaGTTCAGTGCCTGTATATCAGAAAACCTACGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WSLLCIAASVYI*FSACISENLRG Trigger: GCCACGTAGGTTTTCTGATATACAGGCACTGAACAAAATATATACTGATGCCGCGATGCATAATAAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS CCA 90 bp | CTTCTCCTCCTCCGGGCTTCTGCTACAGGGAGAGTCCGAAGCTTCTaGTCCCCGGGGAGGGCTGAGGCCTGGAGCAAGAGAGCTGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLLRASATGRVRSF*SPGRAEAWSKRADP Trigger: AGGATCAGCTCTCTTGCTCCAGGCCTCAGCCCTCCCCGGGGACCAGAAGCTTCGGACTCTCCCTGTAGCAGAAGCCCGGAGGAGGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS GCA 90 bp | TTCATTCATGCAGTACACGGTCTCCGTGGCTGGGGCTCTTGTTGCTaGCCCCACTCTCTGGGCCCAGGCGGCTGTCTGCTTCCTTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIHAVHGLRGWGSCC*PHSLGPGGCLLPCG Trigger: GCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGAATGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS CCA 90 bp | TACACGGTCTCCGTGGCTGGGGCTCTTGTTGCTGCCCCCACTCTCTaGGCCCAGGCGGCTGTCTGCTTCCTTGTGGCTGTCTTCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: YTVSVAGALVAAPTL*AQAAVCFLVAVFTD Trigger: ATCAGTGAAGACAGCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS CCA 90 bp | CCACGTCTACCATTTCAGCTTCATTCATGCAGTACACGGTCTCCGTaGCTGGGGCTCTTGTTGCTGCCCCCACTCTCTGGGCCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRLPFQLHSCSTRSP*LGLLLLPPLSGPRR Trigger: CCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGAATGAAGCTGAAATGGTAGACGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS-3UTR CAA 90 bp | ACAACCTCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGTGGGTGGCAGCAGGGCTTTTCCTGTTaGCGGCCCAGGAGCGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTSWDWKLGAKPGFRGWQQGFSC*RPRSGG Trigger: TCCCCCGCTCCTGGGCCGCAAACAGGAAAAGCCCTG...CTGCCACCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115006.2 |
||
| CDS GCA 90 bp | GGGGCTCTTGTTGCTGCCCCCACTCTCTGGGCCCAGGCGGCTGTCTaGTTCCTTGTGGCTGTCTTCACTGATACAACCTTTCTCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GALVAAPTLWAQAAV*FLVAVFTDTTFLSS Trigger: GGATGAGAGAAAGGTTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGTGGGTGGCAGGGGCCACAGGGCTTTTCCTGTTaGCGGCCCTCAATCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SWDWKLGAKPGFRGWQGPQGFSC*RPSIRI Trigger: GATCCTGATTGAGGGCCGCAAACAGGAAAAGCCCTG...TGGCCCCTGCCACCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS TCA 90 bp | TCTCTGGGCCCAGGCGGCTGTCTGCTTCCTTGTGGCTGTCTTCACTaGTACAACCTTTCTCTCATCCACAGGGGCTGTCATCCAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGPGGCLLPCGCLH*YNLSLIHRGCHPRG Trigger: CCCTCTTGGATGACAGCCCCTGTGGATGAGAGAAAGGTTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS-3UTR CAA 90 bp | CCCACCCAAACTGACAACCTCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTGGGAGGACCCTCGTTTaGGTCTTGGATTTTAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTQTDNLLGLEVGSKAWFGRTLV*VLDFRV Trigger: AACCCTAAAATCCAAGACCAAAACGAGGGTCCTCCC...AAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CAA 90 bp | AAACTGACAACCTCCTGGGACTGGAAGTTGGGAGCAAAGCCTGGTTTTCGTGGGGGGAGGACCCTCGTTTaGGTCTTGGATTTTAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLTTSWDWKLGAKPGFRGGRTLV*VLDFRV Trigger: AACCCTAAAATCCAAGACCAAAACGAGGGTCCTCCC...CCCACGAAAACCAGGCTTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAAAGTCCCACCCAAACTGACAACCTCCTGGGACTGGAAGTTGGGAGCAAACAGGGCTTTTCCTGTTaGCGGCCCTCAATCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RKSPTQTDNLLGLEVGSKQGFSC*RPSIRI Trigger: GATCCTGATTGAGGGCCGCAAACAGGAAAAGCCCTG...TTTGCTCCCAACTTCCAGTCCCAGGAGGTTGTCAGTTTGGGTGGGACTTTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 |
||
| CDS GCA 90 bp | AGACACAAGAGACAGGACAGATGTTACCTCAATCAGGATCCCCAGTaGCACGTCTACCATTTCAGCTTCATTCATGCAGTACACGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RHKRQDRCYLNQDPQ*HVYHFSFIHAVHGL Trigger: GAGACCGTGTACTGCATGAATGAAGCTGAAATGGTAGACGTGGCACTGGGGATCCTGATTGAGGTAACATCTGTCCTGTCTCTTGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115006.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCTAGAATACCCATGTTCTCGGCAGCTCTATTTTCCTTTGCATCTGGCAAGGGGAGGACCCTCGTTTaGGTCTTGGATTTTAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSRIPMFSAALFSFASGKGRTLV*VLDFRV Trigger: AACCCTAAAATCCAAGACCAAAACGAGGGTCCTCCC...CTTGCCAGATGCAAAGGAAAATAGAGCTGCCGAGAACATGGGTATTCTAGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS CCA 72 bp | TCCGTGGCTGGGGCTCTTGTTGCTGCCCCCACTCTCTaGGCCCAGGCGGCTGTCTGCTTCCTTGTGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SVAGALVAAPTL*AQAAVCFLVAV Trigger: GACAGCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS GCA 72 bp | CTGCTCCCGGGGGACGAGGAACAGGGAGGGGAGAGCTaGAGCTTATCAGTGGCCTCCAGAGACCGCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPGDEEQGGES*SLSVASRDRCS Trigger: GGAACAGCGGTCTCTGGAGGCCACTGATAAGCTGCAGCTCTCCCCTCCCTGTTCCTCGTCCCCCGGGAGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 |
||
| CDS CAA 72 bp | TCATGCAGTACACGGTCTCCGTGGCTGGGGCTCTTGTaGCTGCCCCCACTCTCTGGGCCCAGGCGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SCSTRSPWLGLL*LPPLSGPRRLS Trigger: AGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS CAA 72 bp | CATTCATGCAGTACACGGTCTCCGTGGCTGGGGCTCTaGTTGCTGCCCCCACTCTCTGGGCCCAGGCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HSCSTRSPWLGL*LLPPLSGPRRL Trigger: CAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGAATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS GCA 72 bp | CCTCCAGAGACCGCTGTTCCCAGGGCTTTTCCTGTTTaGGGCCCAGGAGCGGGGGACCTGTGCTCGTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: PPETAVPRAFPV*GPGAGDLCSFL Trigger: TAGGAACGAGCACAGGTCCCCCGCTCCTGGGCCGCAAACAGGAAAAGCCCTGGGAACAGCGGTCTCTGGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115006.2 |
||
| CDS CAA 90 bp | CAGCTTCATTCATGCAGTACACGGTCTCCGTGGCTGGGGCTCTTGTaGCTGCCCCCACTCTCTGGGCCCAGGCGGCTGTCTGCTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QLHSCSTRSPWLGLL*LPPLSGPRRLSASL Trigger: CAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGAATGAAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS CAA 90 bp | TTTCAGCTTCATTCATGCAGTACACGGTCTCCGTGGCTGGGGCTCTaGTTGCTGCCCCCACTCTCTGGGCCCAGGCGGCTGTCTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FQLHSCSTRSPWLGL*LLPPLSGPRRLSAS Trigger: GGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGAATGAAGCTGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS TCA 72 bp | GCCCAGGAGCGGGGGACCTGTGCTCGTTCCTACCCATaGGGAATCGCCAGGCATAGGAGACACAAGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: AQERGTCARSYP*GIARHRRHKRQ Trigger: CTGTCTCTTGTGTCTCCTATGCCTGGCGATTCCTCATGGGTAGGAACGAGCACAGGTCCCCCGCTCCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115006.2 |
||
| CDS CAA 90 bp | TTGTTGCTGCCCCCACTCTCTGGGCCCAGGCGGCTGTCTGCTTCCTaGTGGCTGTCTTCACTGATACAACCTTTCTCTCATCCACAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLPPLSGPRRLSAS*WLSSLIQPFSHPQG Trigger: CCCCTGTGGATGAGAGAAAGGTTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS GCA 72 bp | GTTGCTGCCCCCACTCTCTGGGCCCAGGCGGCTGTCTaGTTCCTTGTGGCTGTCTTCACTGATACAACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VAAPTLWAQAAV*FLVAVFTDTTF Trigger: AAAGGTTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAGCCGCCTGGGCCCAGAGAGTGGGGGCAGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
||
| CDS GCA 72 bp | TCCCCAGTGCCACGTCTACCATTTCAGCTTCATTCATaGAGTACACGGTCTCCGTGGCTGGGGCTCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPVPRLPFQLHS*STRSPWLGLLL Trigger: CAACAAGAGCCCCAGCCACGGAGACCGTGTACTGCATGAATGAAGCTGAAATGGTAGACGTGGCACTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
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| CDS TCA 72 bp | CCAGGCGGCTGTCTGCTTCCTTGTGGCTGTCTTCACTaGTACAACCTTTCTCTCATCCACAGGGGCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PGGCLLPCGCLH*YNLSLIHRGCH Trigger: ATGACAGCCCCTGTGGATGAGAGAAAGGTTGTATCAGTGAAGACAGCCACAAGGAAGCAGACAGCCGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055097.11 ENSMUST00000115006.2 ENSMUST00000115007.9 ENSMUST00000118559.2 |
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| CDS GCA 72 bp | CTTTTCCTGTTTGCGGCCCTCAATCAGGATCCCCAGTaGCACGTCTACCATTTCAGCTTCATTCATGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: LFLFAALNQDPQ*HVYHFSFIHAV Trigger: TACTGCATGAATGAAGCTGAAATGGTAGACGTGGCACTGGGGATCCTGATTGAGGGCCGCAAACAGGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055097.11 ENSMUST00000115007.9 ENSMUST00000118559.2 |
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| CDS GCA 72 bp | AGACAGGACAGATGTTACCTCAATCAGGATCCCCAGTaGCACGTCTACCATTTCAGCTTCATTCATGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: RQDRCYLNQDPQ*HVYHFSFIHAV Trigger: TACTGCATGAATGAAGCTGAAATGGTAGACGTGGCACTGGGGATCCTGATTGAGGTAACATCTGTCCTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115006.2 |
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