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Pregenerated sensors for CYPT4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000047995

Ensembl transcript IDs: ENSMUST00000053956.8

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GTGAAGAGTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTGATGGCAGCGGCGGCTGCTaGTGTTGCTGCTCTAGACCA +
Preference number: 4 (lower is better)
Translates to: VKSGFNRTTAQLPDPFTDGSGGC*CCCSRP
Trigger: TGGTCTAGAGCAGCAACAGCAGCAGCCGCCGCTGCC...ATCAGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCACTCTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS-3UTR GCA 90 bp GTGGTGAAGAGTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTTTTGGCAGCGGCGGCTaGTGCTGTTGCTGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: VVKSGFNRTTAQLPDPFTFGSGG*CCCCSR
Trigger: TCTAGAGCAGCAACAGCAGCAGCCGCCGCTGCCAAA...AGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCACTCTTCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS-3UTR CCA 90 bp GTGGTGAAGAGTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTGTCTCTGTCGAGGTATaGTGGAACTTCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VVKSGFNRTTAQLPDPFTVSVEV*WNFLWL
Trigger: GAGCCAGAGGAAGTTCCACCATACCTCGACAGAGAC...AGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCACTCTTCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS-3UTR CCA 90 bp GTGGTGAAGAGTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTTCTGTCGAGGTATGGTaGAACTTCCTCTGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: VVKSGFNRTTAQLPDPFTSVEVW*NFLWLR
Trigger: TCTGAGCCAGAGGAAGTTCCACCATACCTCGACAGA...AGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCACTCTTCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS-3UTR CCA 90 bp GTGAAGAGTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTGATCTGGCTCAGACACATTaGCATTCTCATGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: VKSGFNRTTAQLPDPFTDLAQTH*HSHERT
Trigger: TGTTCTCTCATGAGAATGCCAATGTGTCTGAGCCAG...ATCAGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCACTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS-3UTR CCA 90 bp GTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTGATGTTTCATTGGTGGAACTTCCTCTaGCTCAGACACATTGGCATT +
Preference number: 4 (lower is better)
Translates to: VALTGPQLSSQTRSLMFHWWNFL*LRHIGI
Trigger: AATGCCAATGTGTCTGAGCCAGAGGAAGTTCCACCA...ATGAAACATCAGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS-3UTR CCA 90 bp GTGGCTTTAACAGGACCACAGCTCAGCTCCCAGACCCGTTCACTGATGTTTCATCACTGTAATCTCATTTaGCTCCAAAGGTTCAGTCGG +
Preference number: 4 (lower is better)
Translates to: VALTGPQLSSQTRSLMFHHCNLI*LQRFSR
Trigger: CCGACTGAACCTTTGGAGCCAAATGAGATTACAGTG...ATGAAACATCAGTGAACGGGTCTGGGAGCTGAGCTGTGGTCCTGTTAAAGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS CCA 90 bp TCCATTCGGAGCCAGGTCTCTGTCGAGGTATGGTGGAACTTCCTCTaGCTCAGACACATTGGCATTCTCATGAGAGAACAATGCCACTGT +
Preference number: 5 (lower is better)
Translates to: SIRSQVSVEVWWNFL*LRHIGILMREQCHC
Trigger: ACAGTGGCATTGTTCTCTCATGAGAATGCCAATGTGTCTGAGCCAGAGGAAGTTCCACCATACCTCGACAGAGACCTGGCTCCGAATGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS CCA 90 bp CACATTGGCATTCTCATGAGAGAACAATGCCACTGTAATCTCATTTaGCTCCAAAGGTTCAGTCGGTTCCGGTTCGATCAGCTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: HIGILMREQCHCNLI*LQRFSRFRFDQLPL
Trigger: CAACGGGAGCTGATCGAACCGGAACCGACTGAACCTTTGGAGCCAAATGAGATTACAGTGGCATTGTTCTCTCATGAGAATGCCAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS GCA 72 bp CGATCTTTTGGCTTTGGCAGCGGCGGCTGCTGCTGTTaGTGCTCTAGACCAGTGGACTTTCTTGGCCACCCG +
Preference number: 6 (lower is better)
Translates to: RSFGFGSGGCCC*CSRPVDFLGHP
Trigger: CGGGTGGCCAAGAAAGTCCACTGGTCTAGAGCAGCAACAGCAGCAGCCGCCGCTGCCAAAGCCAAAAGATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS GCA 72 bp TCTTTTGGCTTTGGCAGCGGCGGCTGCTGCTGTTGCTaGTCTAGACCAGTGGACTTTCTTGGCCACCCGAGT +
Preference number: 6 (lower is better)
Translates to: SFGFGSGGCCCC*SRPVDFLGHPS
Trigger: ACTCGGGTGGCCAAGAAAGTCCACTGGTCTAGAGCAGCAACAGCAGCAGCCGCCGCTGCCAAAGCCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS GCA 72 bp CTTAAGCTTCGATCTTTTGGCTTTGGCAGCGGCGGCTaGTGCTGTTGCTGCTCTAGACCAGTGGACTTTCTT +
Preference number: 6 (lower is better)
Translates to: LKLRSFGFGSGG*CCCCSRPVDFL
Trigger: AAGAAAGTCCACTGGTCTAGAGCAGCAACAGCAGCAGCCGCCGCTGCCAAAGCCAAAAGATCGAAGCTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS CAA 90 bp GGAAGCTTAGATCTAGGGTTTCGCTTCTTCTTAAGCTTCGATCTTTaGGCTTTGGCAGCGGCGGCTGCTGCTGTTGCTGCTCTAGACCAG +
Preference number: 6 (lower is better)
Translates to: GSLDLGFRFFLSFDL*ALAAAAAAVAALDQ
Trigger: CTGGTCTAGAGCAGCAACAGCAGCAGCCGCCGCTGCCAAAGCCAAAAGATCGAAGCTTAAGAAGAAGCGAAACCCTAGATCTAAGCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS CCA 72 bp CAATTCTCCATTCGGAGCCAGGTCTCTGTCGAGGTATaGTGGAACTTCCTCTGGCTCAGACACATTGGCATT +
Preference number: 6 (lower is better)
Translates to: QFSIRSQVSVEV*WNFLWLRHIGI
Trigger: AATGCCAATGTGTCTGAGCCAGAGGAAGTTCCACCATACCTCGACAGAGACCTGGCTCCGAATGGAGAATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS CCA 72 bp AGCCAGGTCTCTGTCGAGGTATGGTGGAACTTCCTCTaGCTCAGACACATTGGCATTCTCATGAGAGAACAA +
Preference number: 6 (lower is better)
Translates to: SQVSVEVWWNFL*LRHIGILMREQ
Trigger: TTGTTCTCTCATGAGAATGCCAATGTGTCTGAGCCAGAGGAAGTTCCACCATACCTCGACAGAGACCTGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS CCA 72 bp ATTCTCATGAGAGAACAATGCCACTGTAATCTCATTTaGCTCCAAAGGTTCAGTCGGTTCCGGTTCGATCAG +
Preference number: 6 (lower is better)
Translates to: ILMREQCHCNLI*LQRFSRFRFDQ
Trigger: CTGATCGAACCGGAACCGACTGAACCTTTGGAGCCAAATGAGATTACAGTGGCATTGTTCTCTCATGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8
CDS GCA 72 bp TGGCTCAGACACATTGGCATTCTCATGAGAGAACAATaGCACTGTAATCTCATTTGGCTCCAAAGGTTCAGT +
Preference number: 6 (lower is better)
Translates to: WLRHIGILMREQ*HCNLIWLQRFS
Trigger: ACTGAACCTTTGGAGCCAAATGAGATTACAGTGGCATTGTTCTCTCATGAGAATGCCAATGTGTCTGAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000053956.8