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Pregenerated sensors for CYPT2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090132

Ensembl transcript IDs: ENSMUST00000041758.5

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR CCA 90 bp AGACTGGCCTTGACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTGTCTACATTTGGAAATaGGTCACTGTCAAGGCATGG +
Preference number: 4 (lower is better)
Translates to: RLALTGPQLSSQTHLLMFVYIWK*VTVKAW
Trigger: CCATGCCTTGACAGTGACCCATTTCCAAATGTAGAC...AAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGCCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS-3UTR TCA 90 bp ACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTCATGGGTCTTTGGTGGCTCAGACACATTaGCATTCTCATGAGAGAACA +
Preference number: 4 (lower is better)
Translates to: TGPQLSSQTHLLMFHGSLVAQTH*HSHERT
Trigger: TGTTCTCTCATGAGAATGTCAATGTGTCTGAGCCAC...CAAAGACCCATGAAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS-3UTR CCA 90 bp TTGACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTCATGGGTCTGGCCAAGTCTACATTTaGAAATGGGTCACTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LTGPQLSSQTHLLMFHGSGQVYI*KWVTVK
Trigger: CTTGACAGTGACCCATTTCCAAATGTAGACTTGGCC...AGACCCATGAAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS-3UTR TCA 90 bp ACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTCATGGGTCTTTGAATTCTCCTTCGAAGTaGTTGTTCCCCCTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: TGPQLSSQTHLLMFHGSLNSPSK*LFPLLC
Trigger: ACAAAGAAGGGGGAACAATCACTTCGAAGGAGAATT...CAAAGACCCATGAAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS-3UTR CAA 90 bp TTGACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTCATGGGTCTTTAAGCTTCGATCTTTaGGCTTTGGCAGTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: LTGPQLSSQTHLLMFHGSLSFDL*ALAVAA
Trigger: AGCCGCCACTGCCAAAGCCAAAAGATCGAAGCTTAA...AGACCCATGAAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS-3UTR CAA 90 bp ACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTCATGGGTCTTTGTGGCCAAGTCTACATTaGGAAATGGGTCACTGTCAA +
Preference number: 5 (lower is better)
Translates to: TGPQLSSQTHLLMFHGSLWPSLH*EMGHCQ
Trigger: TTGACAGTGACCCATTTCCAAATGTAGACTTGGCCA...CAAAGACCCATGAAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS-3UTR CAA 90 bp TTGACAGGACCACAGCTCAGCTCCCAGACCCATTTACTGATGTTTCATGGGTCTCGCTTCTTATTAAGCTaGAATCTTTTGGCAGCAGTC +
Preference number: 5 (lower is better)
Translates to: LTGPQLSSQTHLLMFHGSRFLLS*NLLAAV
Trigger: GACTGCTGCCAAAAGATTCAAGCTTAATAAGAAGCG...AGACCCATGAAACATCAGTAAATGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS CCA 90 bp TACATTTGGAAATGGGTCACTGTCAAGGCATGGTGGAACTTCCTGTaGCTCAGACACATTGACATTCTCATGAGAGAACAATGCCACTGT +
Preference number: 5 (lower is better)
Translates to: YIWKWVTVKAWWNFL*LRHIDILMREQCHC
Trigger: ACAGTGGCATTGTTCTCTCATGAGAATGTCAATGTGTCTGAGCCACAGGAAGTTCCACCATGCCTTGACAGTGACCCATTTCCAAATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS TCA 90 bp AAGTTCAGTAGCACGCTTGATTCGTCTCCTAATTCTCCTTCGAAGTaGTTGTTCCCCCTTCTTTGTAATCTTAAATGTACTTTTTCTATA +
Preference number: 5 (lower is better)
Translates to: KFSSTLDSSPNSPSK*LFPLLCNLKCTFSI
Trigger: TATAGAAAAAGTACATTTAAGATTACAAAGAAGGGGGAACAATCACTTCGAAGGAGAATTAGGAGACGAATCAAGCGTGCTACTGAACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS GCA 72 bp TCGATGAGCTTTAGTTGGCTCCGCTCCAGGTGGCTCTaGATCAATCGAAGTTCAGTAGCACGCTTGATTCGT +
Preference number: 6 (lower is better)
Translates to: SMSFSWLRSRWL*INRSSVARLIR
Trigger: ACGAATCAAGCGTGCTACTGAACTTCGATTGATGCAGAGCCACCTGGAGCGGAGCCAACTAAAGCTCATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS CCA 72 bp GTCTACATTTGGAAATGGGTCACTGTCAAGGCATGGTaGAACTTCCTGTGGCTCAGACACATTGACATTCTC +
Preference number: 6 (lower is better)
Translates to: VYIWKWVTVKAW*NFLWLRHIDIL
Trigger: GAGAATGTCAATGTGTCTGAGCCACAGGAAGTTCCACCATGCCTTGACAGTGACCCATTTCCAAATGTAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS CCA 72 bp AAATGGGTCACTGTCAAGGCATGGTGGAACTTCCTGTaGCTCAGACACATTGACATTCTCATGAGAGAACAA +
Preference number: 6 (lower is better)
Translates to: KWVTVKAWWNFL*LRHIDILMREQ
Trigger: TTGTTCTCTCATGAGAATGTCAATGTGTCTGAGCCACAGGAAGTTCCACCATGCCTTGACAGTGACCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS CCA 72 bp CAAGTCTACATTTGGAAATGGGTCACTGTCAAGGCATaGTGGAACTTCCTGTGGCTCAGACACATTGACATT +
Preference number: 6 (lower is better)
Translates to: QVYIWKWVTVKA*WNFLWLRHIDI
Trigger: AATGTCAATGTGTCTGAGCCACAGGAAGTTCCACCATGCCTTGACAGTGACCCATTTCCAAATGTAGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS TCA 72 bp AGCACGCTTGATTCGTCTCCTAATTCTCCTTCGAAGTaGTTGTTCCCCCTTCTTTGTAATCTTAAATGTACT +
Preference number: 6 (lower is better)
Translates to: STLDSSPNSPSK*LFPLLCNLKCT
Trigger: AGTACATTTAAGATTACAAAGAAGGGGGAACAATCACTTCGAAGGAGAATTAGGAGACGAATCAAGCGTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5
CDS CAA 72 bp GATCTAGGGTTTCGCTTCTTATTAAGCTTGAATCTTTaGGCAGCAGTCTTCTTAAGCTTCGATCTTTTGGCA +
Preference number: 6 (lower is better)
Translates to: DLGFRFLLSLNL*AAVFLSFDLLA
Trigger: TGCCAAAAGATCGAAGCTTAAGAAGACTGCTGCCAAAAGATTCAAGCTTAATAAGAAGCGAAACCCTAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000041758.5