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Pregenerated sensors for CYPT12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027564

Ensembl transcript IDs: ENSMUST00000029080.5

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GTCTTCCTTAGGAACTGGGGAGTTTTCAGGGCACGATGGAACTTCTaGTGGTGTCAAGCTGACATTCTCATTCACTGGCTCATGGATGAC +
Preference number: 5 (lower is better)
Translates to: VFLRNWGVFRARWNF*WCQADILIHWLMDD
Trigger: GTCATCCATGAGCCAGTGAATGAGAATGTCAGCTTGACACCACCAGAAGTTCCATCGTGCCCTGAAAACTCCCCAGTTCCTAAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS TCA 90 bp TTAAGAATTCTTACTTTGATGGCTTTCTTCCCTTTCGATGCCTGTTaGCGCCCTCTCTTCCCCTTTCTCATTATCTCAGCACAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LRILTLMAFFPFDAC*RPLFPFLIISAQLL
Trigger: CAAAAGCTGTGCTGAGATAATGAGAAAGGGGAAGAGAGGGCGTCAACAGGCATCGAAAGGGAAGAAAGCCATCAAAGTAAGAATTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS GCA 90 bp AGCTTCTTTAAGAATTCTTACTTTGATGGCTTTCTTCCCTTTCGATaGCTGTTGACGCCCTCTCTTCCCCTTTCTCATTATCTCAGCACA +
Preference number: 5 (lower is better)
Translates to: SFFKNSYFDGFLPFR*LLTPSLPLSHYLST
Trigger: TGTGCTGAGATAATGAGAAAGGGGAAGAGAGGGCGTCAACAGGCATCGAAAGGGAAGAAAGCCATCAAAGTAAGAATTCTTAAAGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS TCA 90 bp ACATTCTCATTCACTGGCTCATGGATGACTAATGCTAGAGCATTTTaGCTAGCTTCTTTAAGAATTCTTACTTTGATGGCTTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: TFSFTGSWMTNARAF*LASLRILTLMAFFP
Trigger: AGGGAAGAAAGCCATCAAAGTAAGAATTCTTAAAGAAGCTAGTCAAAATGCTCTAGCATTAGTCATCCATGAGCCAGTGAATGAGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS GCA 72 bp ACCATAGGAAGCTCTACGATTCCGCTGCTTGGATCTTaGTGCTGCAGCAGCAGTAGTCGGCTCAGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: TIGSSTIPLLGS*CCSSSSRLRRS
Trigger: AGAGCGCCTGAGCCGACTACTGCTGCTGCAGCAGCAAGATCCAAGCAGCGGAATCGTAGAGCTTCCTATGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS GCA 72 bp GACGACGCGAAGCACGTTGGTTCTTGTTGGAGTTCTTaGACCTTCGACCATAGGAAGCTCTACGATTCCGCT +
Preference number: 6 (lower is better)
Translates to: DDAKHVGSCWSS*TFDHRKLYDSA
Trigger: AGCGGAATCGTAGAGCTTCCTATGGTCGAAGGTGCAAGAACTCCAACAAGAACCAACGTGCTTCGCGTCGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CCA 72 bp AGCTTTTGCGACGACGCGAAGCACGTTGGTTCTTGTTaGAGTTCTTGCACCTTCGACCATAGGAAGCTCTAC +
Preference number: 6 (lower is better)
Translates to: SFCDDAKHVGSC*SSCTFDHRKLY
Trigger: GTAGAGCTTCCTATGGTCGAAGGTGCAAGAACTCCAACAAGAACCAACGTGCTTCGCGTCGTCGCAAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CCA 72 bp AGGAACTGGGGAGTTTTCAGGGCACGATGGAACTTCTaGTGGTGTCAAGCTGACATTCTCATTCACTGGCTC +
Preference number: 6 (lower is better)
Translates to: RNWGVFRARWNF*WCQADILIHWL
Trigger: GAGCCAGTGAATGAGAATGTCAGCTTGACACCACCAGAAGTTCCATCGTGCCCTGAAAACTCCCCAGTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CAA 72 bp CCTCTCTTCCCCTTTCTCATTATCTCAGCACAGCTTTaGCGACGACGCGAAGCACGTTGGTTCTTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: PLFPFLIISAQL*RRREARWFLLE
Trigger: CTCCAACAAGAACCAACGTGCTTCGCGTCGTCGCAAAAGCTGTGCTGAGATAATGAGAAAGGGGAAGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS GCA 72 bp CTCTCTTCCCCTTTCTCATTATCTCAGCACAGCTTTTaGGACGACGCGAAGCACGTTGGTTCTTGTTGGAGT +
Preference number: 6 (lower is better)
Translates to: LSSPFSLSQHSF*DDAKHVGSCWS
Trigger: ACTCCAACAAGAACCAACGTGCTTCGCGTCGTCGCAAAAGCTGTGCTGAGATAATGAGAAAGGGGAAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CAA 72 bp TATCTCAGCACAGCTTTTGCGACGACGCGAAGCACGTaGGTTCTTGTTGGAGTTCTTGCACCTTCGACCATA +
Preference number: 6 (lower is better)
Translates to: YLSTAFATTRST*VLVGVLAPSTI
Trigger: TATGGTCGAAGGTGCAAGAACTCCAACAAGAACCAACGTGCTTCGCGTCGTCGCAAAAGCTGTGCTGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CCA 72 bp GTCTTCCTTAGGAACTGGGGAGTTTTCAGGGCACGATaGAACTTCTGGTGGTGTCAAGCTGACATTCTCATT +
Preference number: 6 (lower is better)
Translates to: VFLRNWGVFRAR*NFWWCQADILI
Trigger: AATGAGAATGTCAGCTTGACACCACCAGAAGTTCCATCGTGCCCTGAAAACTCCCCAGTTCCTAAGGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CAA 72 bp TCTTACTTTGATGGCTTTCTTCCCTTTCGATGCCTGTaGACGCCCTCTCTTCCCCTTTCTCATTATCTCAGC +
Preference number: 6 (lower is better)
Translates to: SYFDGFLPFRCL*TPSLPLSHYLS
Trigger: GCTGAGATAATGAGAAAGGGGAAGAGAGGGCGTCAACAGGCATCGAAAGGGAAGAAAGCCATCAAAGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS GCA 72 bp AAGAATTCTTACTTTGATGGCTTTCTTCCCTTTCGATaGCTGTTGACGCCCTCTCTTCCCCTTTCTCATTAT +
Preference number: 6 (lower is better)
Translates to: KNSYFDGFLPFR*LLTPSLPLSHY
Trigger: ATAATGAGAAAGGGGAAGAGAGGGCGTCAACAGGCATCGAAAGGGAAGAAAGCCATCAAAGTAAGAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS CAA 90 bp TTTAAGAATTCTTACTTTGATGGCTTTCTTCCCTTTCGATGCCTGTaGACGCCCTCTCTTCCCCTTTCTCATTATCTCAGCACAGCTTTT +
Preference number: 6 (lower is better)
Translates to: FKNSYFDGFLPFRCL*TPSLPLSHYLSTAF
Trigger: AAAAGCTGTGCTGAGATAATGAGAAAGGGGAAGAGAGGGCGTCAACAGGCATCGAAAGGGAAGAAAGCCATCAAAGTAAGAATTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5
CDS TCA 72 bp TTCACTGGCTCATGGATGACTAATGCTAGAGCATTTTaGCTAGCTTCTTTAAGAATTCTTACTTTGATGGCT +
Preference number: 6 (lower is better)
Translates to: FTGSWMTNARAF*LASLRILTLMA
Trigger: AGCCATCAAAGTAAGAATTCTTAAAGAAGCTAGTCAAAATGCTCTAGCATTAGTCATCCATGAGCCAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029080.5