Pregenerated sensors for CYPT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023257Ensembl transcript IDs: ENSMUST00000024026.3, ENSMUST00000115422.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | CCATCATTCAAATTAGTTTGTGGTGAAGAGTTTCCTTaGCAGGACCACAGCTCAGCTCCCAGACCCGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: PSFKLVCGEEFP*QDHSSAPRPVH Trigger: GTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAAACTCTTCACCACAAACTAATTTGAATGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| 3UTR TCA 72 bp | CTGATTATTTTCACCATCATTCAAATTAGTTTGTGGTaGAGAGTTTCCTTGACAGGACCACAGCTCAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LIIFTIIQISLW*RVSLTGPQLSS Trigger: GGAGCTGAGCTGTGGTCCTGTCAAGGAAACTCTTCACCACAAACTAATTTGAATGATGGTGAAAATAATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR GCA 90 bp | GGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTTTGGACTTTGGCAGCAGCGGCTaGTCCTGCTGCTGCGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: GPQLSSQTRPLMFHGTLDFGSSG*SCCCAR Trigger: TCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAA...GTCCAAAGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR GCA 90 bp | TCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGTTTGGCAGCAGCGGCTaGTCCTGCTGCTGCGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: SLTGPQLSSQTRPLMFHGFGSSG*SCCCAR Trigger: TCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAA...CCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CCA 90 bp | TCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGTTGGCTCCAAAGCCATaGTCGGTTCCGGTTCGATCA | + |
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Preference number: 4 (lower is better) Translates to: SLTGPQLSSQTRPLMFHGLAPKP*SVPVRS Trigger: TGATCGAACCGGAACCGACCATGGCTTTGGAGCCAA...CCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CCA 90 bp | TTTGTGGTGAAGAGTTTCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCCACTGTAATCTCGCTTaGCTCCAAAGCCATGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: FVVKSFLDRTTAQLPDPSHCNLA*LQSHGR Trigger: CCGACCATGGCTTTGGAGCCAAGCGAGATTACAGTG...GGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAAACTCTTCACCACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CCA 90 bp | TCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGGTCACTGTCAAGGCATaGTGGAACTTCCTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SLTGPQLSSQTRPLMFHGVTVKA*WNFLWI Trigger: GATCCAGAGGAAGTTCCACCATGCCTTGACAGTGAC...CCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CCA 90 bp | AGAGTTTCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTTTGGCTCCAAAGCCATaGTCGGTTCCGGTTCGATCA | + |
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Preference number: 4 (lower is better) Translates to: RVSLTGPQLSSQTRPLMFLAPKP*SVPVRS Trigger: TGATCGAACCGGAACCGACCATGGCTTTGGAGCCAA...AAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAAACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CCA 90 bp | TTCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGTCACTGTCAAGGCATaGTGGAACTTCCTCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: FLDRTTAQLPDPSTDVSWVTVKA*WNFLWI Trigger: GATCCAGAGGAAGTTCCACCATGCCTTGACAGTGAC...CCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR TCA 90 bp | GGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTTTGGACAATTCTTCTTTGAAGTaGTTGCTCCCCCTTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: GPQLSSQTRPLMFHGTLDNSSLK*LLPLLR Trigger: ACGGAGAAGGGGGAGCAATCACTTCAAAGAAGAATT...GTCCAAAGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR TCA 90 bp | AAGAGTTTCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTAATTCTTCTTTGAAGTaGTTGCTCCCCCTTCTCCGT | + |
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Preference number: 4 (lower is better) Translates to: KSFLDRTTAQLPDPSTDVNSSLK*LLPLLR Trigger: ACGGAGAAGGGGGAGCAATCACTTCAAAGAAGAATT...AACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAAACTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR GCA 90 bp | TTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTCTTATGAGAGAAGAATaGCACTGTAATCTCGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LTGPQLSSQTRPLMFHGTLMREE*HCNLAW Trigger: CCAAGCGAGATTACAGTGGCATTCTTCTCTCATAAG...AGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR TCA 90 bp | TTCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGACATTGGCATTCTTATaGGAGAAGAATGCCACTGTA | + |
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Preference number: 4 (lower is better) Translates to: FLDRTTAQLPDPSTDVSWTLAFL*EKNATV Trigger: TACAGTGGCATTCTTCTCTCATAAGAATGCCAATGT...CCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR TCA 90 bp | TTTGTGGTGAAGAGTTTCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCCCCTTCTCCGTAATCTaGAAGAACTTTAATGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: FVVKSFLDRTTAQLPDPSPFSVI*KNFNVV Trigger: AACTACATTAAAGTTCTTTCAGATTACGGAGAAGGG...GGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGAAACTCTTCACCACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115422.2 |
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| CDS GCA 90 bp | GGTGGTCTTCTCAAGCTTCGAAATTTTGGCAGCAGCGGCTGCTCCTaGTGCTGCGCTAGACCAGTGGACTTTCTTGGCCATCTGAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: GGLLKLRNFGSSGCS*CCARPVDFLGHLSH Trigger: ATGGCTCAGATGGCCAAGAAAGTCCACTGGTCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTTGAGAAGACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CAA 90 bp | GGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTTTGGACTCAAGCTTCGAAATTTaGGCAGCAGCGGCTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: GPQLSSQTRPLMFHGTLDSSFEI*AAAAAP Trigger: AGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTTGA...GTCCAAAGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CAA 90 bp | TCCTTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGTCAAGCTTCGAAATTTaGGCAGCAGCGGCTGCTCCT | + |
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Preference number: 5 (lower is better) Translates to: SLTGPQLSSQTRPLMFHGSSFEI*AAAAAP Trigger: AGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTTGA...CCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CAA 90 bp | TTGACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTGAGTGTGAAGATCTCTaGGGAAGCTTAGAACTAGGG | + |
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Preference number: 5 (lower is better) Translates to: LTGPQLSSQTRPLMFHGTECEDL*GSLELG Trigger: CCCTAGTTCTAAGCTTCCCAAGAGATCTTCACACTC...AGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CAA 90 bp | ACAGGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTTTGGAGTGTGAAGATCTCTaGGGAAGCTTAGAACTAGGG | + |
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Preference number: 5 (lower is better) Translates to: TGPQLSSQTRPLMFHGTLECEDL*GSLELG Trigger: CCCTAGTTCTAAGCTTCCCAAGAGATCTTCACACTC...CAAAGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS-3UTR CAA 90 bp | GGACCACAGCTCAGCTCCCAGACCCGTCCACTGATGTTTCATGGGACTTTGGACTTGGCTCCGCGTCAATaGTCTCCTAATTCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: GPQLSSQTRPLMFHGTLDLAPRQ*SPNSSL Trigger: CAAAGAAGAATTAGGAGACAATTGACGCGGAGCCAA...GTCCAAAGTCCCATGAAACATCAGTGGACGGGTCTGGGAGCTGAGCTGTGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS GCA 90 bp | AACTTCCTCTGGATCAGACACATTGGCATTCTTATGAGAGAAGAATaGCACTGTAATCTCGCTTGGCTCCAAAGCCATGGTCGGTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: NFLWIRHIGILMREE*HCNLAWLQSHGRFR Trigger: CCGGAACCGACCATGGCTTTGGAGCCAAGCGAGATTACAGTGGCATTCTTCTCTCATAAGAATGCCAATGTGTCTGATCCAGAGGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CCA 90 bp | GGAACTGGCCAAGTCTCCATTCGGAAATGGGTCACTGTCAAGGCATaGTGGAACTTCCTCTGGATCAGACACATTGGCATTCTTATGAGA | + |
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Preference number: 5 (lower is better) Translates to: GTGQVSIRKWVTVKA*WNFLWIRHIGILMR Trigger: TCTCATAAGAATGCCAATGTGTCTGATCCAGAGGAAGTTCCACCATGCCTTGACAGTGACCCATTTCCGAATGGAGACTTGGCCAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS GCA 72 bp | AAGCTTCGAAATTTTGGCAGCAGCGGCTGCTCCTGCTaGTGCGCTAGACCAGTGGACTTTCTTGGCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: KLRNFGSSGCSC*CARPVDFLGHL Trigger: CAGATGGCCAAGAAAGTCCACTGGTCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS GCA 72 bp | CTCAAGCTTCGAAATTTTGGCAGCAGCGGCTGCTCCTaGTGCTGCGCTAGACCAGTGGACTTTCTTGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LKLRNFGSSGCS*CCARPVDFLGH Trigger: ATGGCCAAGAAAGTCCACTGGTCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CAA 72 bp | TTGAATCTTTTGGTGGTCTTCTCAAGCTTCGAAATTTaGGCAGCAGCGGCTGCTCCTGCTGCTGCGCTAGAC | + |
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Preference number: 6 (lower is better) Translates to: LNLLVVFSSFEI*AAAAAPAAALD Trigger: GTCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTTGAGAAGACCACCAAAAGATTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CAA 72 bp | CAAAGCCATGGTCGGTTCCGGTTCGATCAGCTCCAGTaGGCTCCGCGTCAATTGTCTCCTAATTCTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: QSHGRFRFDQLQ*APRQLSPNSSL Trigger: CAAAGAAGAATTAGGAGACAATTGACGCGGAGCCAACTGGAGCTGATCGAACCGGAACCGACCATGGCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CCA 72 bp | ATTCTTATGAGAGAAGAATGCCACTGTAATCTCGCTTaGCTCCAAAGCCATGGTCGGTTCCGGTTCGATCAG | + |
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Preference number: 6 (lower is better) Translates to: ILMREECHCNLA*LQSHGRFRFDQ Trigger: CTGATCGAACCGGAACCGACCATGGCTTTGGAGCCAAGCGAGATTACAGTGGCATTCTTCTCTCATAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CCA 72 bp | CAAGTCTCCATTCGGAAATGGGTCACTGTCAAGGCATaGTGGAACTTCCTCTGGATCAGACACATTGGCATT | + |
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Preference number: 6 (lower is better) Translates to: QVSIRKWVTVKA*WNFLWIRHIGI Trigger: AATGCCAATGTGTCTGATCCAGAGGAAGTTCCACCATGCCTTGACAGTGACCCATTTCCGAATGGAGACTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CAA 90 bp | TTAATAAGTTTGAATCTTTTGGTGGTCTTCTCAAGCTTCGAAATTTaGGCAGCAGCGGCTGCTCCTGCTGCTGCGCTAGACCAGTGGACT | + |
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Preference number: 6 (lower is better) Translates to: LISLNLLVVFSSFEI*AAAAAPAAALDQWT Trigger: AGTCCACTGGTCTAGCGCAGCAGCAGGAGCAGCCGCTGCTGCCAAAATTTCGAAGCTTGAGAAGACCACCAAAAGATTCAAACTTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS TCA 72 bp | GCTCCGCGTCAATTGTCTCCTAATTCTTCTTTGAAGTaGTTGCTCCCCCTTCTCCGTAATCTGAAAGAACTT | + |
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Preference number: 6 (lower is better) Translates to: APRQLSPNSSLK*LLPLLRNLKEL Trigger: AAGTTCTTTCAGATTACGGAGAAGGGGGAGCAATCACTTCAAAGAAGAATTAGGAGACAATTGACGCGGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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| CDS CAA 72 bp | GAACTAGGGTTTCGCTTCTTAATAAGTTTGAATCTTTaGGTGGTCTTCTCAAGCTTCGAAATTTTGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ELGFRFLISLNL*VVFSSFEILAA Trigger: TGCTGCCAAAATTTCGAAGCTTGAGAAGACCACCAAAAGATTCAAACTTATTAAGAAGCGAAACCCTAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024026.3 ENSMUST00000115422.2 |
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