Pregenerated sensors for CYP8B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050445Ensembl transcript IDs: ENSMUST00000062474.5
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATCGAGTAAGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATaGCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: HRVRQAGWVEAAFAR*HLTHGSWSALQDES Trigger: TGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR-3UTR TCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCACACATGTGTTCCTCCTaGGAGGAGGGTCAGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LTHGSWSALQDESSVGEPHMCSS*EEGQAE Trigger: CTCTGCCTGACCCTCCTCTCAGGAGGAACACATGTG...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR-3UTR TCA 90 bp | GCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGAGCATGACAGATCTCTaGGAGCTGGGGAGAGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: AFARCHLTHGSWSALQDESMTDL*ELGRGR Trigger: CCTTCCTCTCCCCAGCTCTCAGAGATCTGTCATGCT...CTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR-3UTR GCA 90 bp | GGGCATCGAGTAAGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATGCCATAGTGCTGCTCTGGGCTaGAGGGTATGCTCAGACCTG | + |
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Preference number: 2 (lower is better) Translates to: GHRVRQAGWVEAAFARCHSAALG*RVCSDL Trigger: CAGGTCTGAGCATACCCTGCAGCCCAGAGCAGCACT...ATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR-3UTR TCA 90 bp | GCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGGTCTTATGGGGAGCATaGCAGATCTCTGAGAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: AFARCHLTHGSWSALQDEVLWGA*QISESW Trigger: CCAGCTCTCAGAGATCTGTCATGCTCCCCATAAGAC...CTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR-3UTR CCA 90 bp | GGGCATCGAGTAAGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATGCCATCTCAGAGCCAGAGGATaGGTATTCAGTGCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GHRVRQAGWVEAAFARCHLRARG*VFSAAL Trigger: CAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAG...ATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR-3UTR TCA 90 bp | GTTGAGGCAGCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCCATCAGTTGTAAACTaGGCTGACCACATGTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: VEAAFARCHLTHGSWSALPSVVN*ADHMCS Trigger: GGAACACATGTGGTCAGCTCAGTTTACAACTGATGG...GAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR CCA 72 bp | GCTGGGGAGAGGAAGGAGTGCCTCAGAGCCAGAGGATaGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGC | + |
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Preference number: 3 (lower is better) Translates to: AGERKECLRARG*VFSAALGCRVC Trigger: GCATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAGGCACTCCTTCCTCTCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR GCA 72 bp | AGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATaGCATCTGACTCACGGGAGCTGGTCTGCCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RQAGWVEAAFAR*HLTHGSWSALQ Trigger: CTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR TCA 72 bp | CTGGATGGGTTGAGGCAGCATTTGCAAGATGCCATCTaGCTCACGGGAGCTGGTCTGCCCTCCAGGATGAGT | + |
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Preference number: 3 (lower is better) Translates to: LDGLRQHLQDAI*LTGAGLPSRMS Trigger: ACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAACCCATCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| 3UTR TCA 72 bp | GGAGTAAGGGCATCGAGTAAGGCAGGCTGGATGGGTTaGGGCAGCATTTGCAAGATGCCATCTGACTCACGG | + |
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Preference number: 3 (lower is better) Translates to: GVRASSKAGWMG*GSICKMPSDSR Trigger: CCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATGCCCTTACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTCCTCCTGTACCACCCTaGGGAGGGTGGGGGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: ARCHLTHGSWSALQDESSPPVPP*GGWGWH Trigger: GTGCCACCCCCACCCTCCTCAGGGTGGTACAGGAGG...ACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR GCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCATCCCAGGGCCTGCGGTaGCTGAGCAGCAAGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPSQGLR*LSSKDR Trigger: TCTGTCCTTGCTGCTCAGGCACCGCAGGCCCTGGGA...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAGGACCCAGAAACAGGTaGGTCCCGTGTTCCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPGPRNR*VPCSPG Trigger: CCCAGGGGAACACGGGACCCACCTGTTTCTGGGTCC...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCACCAGCATGGCCTGGTTaGGTTCCTCCAAGCCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPPAWPG*VPPSLA Trigger: GGCAAGGCTTGGAGGAACTCAACCAGGCCATGCTGG...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GTGCCTCAGAGCCAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTCATGGCTAGGCTGTaGGGTGCCAAAGCCCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: VPQSQRMGIQCCSGLQGMLMARL*GAKAPA Trigger: CGCTGGGGCTTTGGCACCTCACAGCCTAGCCATGAG...CATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGGGCATCCCACAACCGTaGGCAGGGCTCCTAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: AFARCHLTHGSWSALQDEGIPQP*AGLLAL Trigger: CAGTGCTAGGAGCCCTGCTCACGGTTGTGGGATGCC...CTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | CAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTCAGACCTGAGAGGGCCTGCGGTGCCTaGGCAGCAAGGACAGACACA | + |
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Preference number: 4 (lower is better) Translates to: QRMGIQCCSGLQGMLRPERACGA*AARTDT Trigger: TGTGTCTGTCCTTGCTGCTCAGGCACCGCAGGCCCT...CTCAGGTCTGAGCATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGCCTGGCCTTACCCATaGCCCTGGTGGCTTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: ARCHLTHGSWSALQDESSAWPYP*PWWLPH Trigger: GTGAGGAAGCCACCAGGGTCATGGGTAAGGCCAGGC...ACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAAGACATCCCCGTGCTTaGCCCGCATCCCCTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPRHPRA*PASPSR Trigger: TCTTGAAGGGGATGCGGGCCAAGCACGGGGATGTCT...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GTGCCTCAGAGCCAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGGCTGTGGGCTCAGGGTaGATGTCGGGGTCCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: VPQSQRMGIQCCSGLQGMAVGSG*MSGSMC Trigger: ACACATGGACCCCGACATCCACCCTGAGCCCACAGC...CATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR GCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCACCGAGCCCCAAGGCATaGTGTAGTGGTGGATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPPSPKA*CSGGSS Trigger: AGAAGATCCACCACTACAGCATGCCTTGGGGCTCGG...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAACAAAGGTGAAGTACTaGCCTCCCAGCTGCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPTKVKY*PPSCTV Trigger: CACGGTGCAGCTGGGAGGCCAGTACTTCACCTTTGT...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | CAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTCAGACCTGAGGGTCCCGTGTTCCCCTaGGAGGCCCAGAGCATCATA | + |
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Preference number: 4 (lower is better) Translates to: QRMGIQCCSGLQGMLRPEGPVFP*EAQSII Trigger: TATGATGCTCTGGGCCTCCCAGGGGAACACGGGACC...CTCAGGTCTGAGCATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTCGGAAAGCCATGGAGTaGCCCAGCCAGGGCACAAAA | + |
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Preference number: 4 (lower is better) Translates to: ARCHLTHGSWSALQDESSRKAME*PSQGTK Trigger: TTTTGTGCCCTGGCTGGGTCACTCCATGGCTTTCCG...ACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTTCTTCCGGAAAGCCATaGAGTGACCCAGCCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ARCHLTHGSWSALQDESSSSGKP*SDPARA Trigger: TGCCCTGGCTGGGTCACTCCATGGCTTTCCGGAAGA...ACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GTTGAGGCAGCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCGGGGTCCATGTGTACTaGGAGATAGGGGAAGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VEAAFARCHLTHGSWSALGVHVY*EIGEES Trigger: GCTCTCTTCCCCTATCTCTCAGTACACATGGACCCC...GAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGGAACCGATCATACTTaGAGGCTGTGGGCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: ARCHLTHGSWSALQDESSGTDHT*RLWAQG Trigger: ACCCTGAGCCCACAGCCTTCAAGTATGATCGGTTCC...ACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGCTGTCCAGCATGGCCTaGTTGAGTTCCTCCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AFARCHLTHGSWSALQDELSSMA*LSSSKP Trigger: AGGCTTGGAGGAACTCAACCAGGCCATGCTGGACAG...CTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGCTTCACACCAGGAGCTaGCACCCAGACTCGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: AFARCHLTHGSWSALQDELHTRS*HPDSNL Trigger: AAGGTTCGAGTCTGGGTGCCAGCTCCTGGTGTGAAG...CTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GTTGAGGCAGCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCACGCACAGCCTTCATaGCATCCTGGTGCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VEAAFARCHLTHGSWSALHAQPS*HPGASA Trigger: TGCTGAAGCACCAGGATGCCATGAAGGCTGTGCGTG...GAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR TCA 90 bp | GTGCCTCAGAGCCAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGAAGTGGATCATCCTGTaGTCCCCATCTACAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: VPQSQRMGIQCCSGLQGMKWIIL*SPSTDW Trigger: CCAGTCTGTAGATGGGGATCACAGGATGATCCACTT...CATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR GCA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAGAGCACCAGTTCTTTTaGATAGGACTGGAAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTHGSWSALQDESSVGEPEHQFF*IGLEVQ Trigger: CTGGACTTCCAGTCCTATGCAAAAGAACTGGTGCTC...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GGGCATCGAGTAAGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATGCCATAGGAAGCGTACCTCATaGCTAGGCTGTGAGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GHRVRQAGWVEAAFARCHRKRTS*LGCEVP Trigger: TGGCACCTCACAGCCTAGCCATGAGGTACGCTTCCT...ATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR GCA 90 bp | GCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTAGTTCCTCCAAGCCTTaGCCCATCAGATGCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: ARCHLTHGSWSALQDESSSSSKP*PIRCLV Trigger: TACCAAGCATCTGATGGGGCAAGGCTTGGAGGAACT...ACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GTGCCTCAGAGCCAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTTGCTGCTTGTCCTTaGTGTAGCCGAATAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VPQSQRMGIQCCSGLQGMLAACP*CSRISS Trigger: TGAGCTTATTCGGCTACACCAAGGACAAGCAGCAAG...CATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR GCA 90 bp | GTTGAGGCAGCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCAGTGGTGGATCTTCTTaGCCGACTTGTAGAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VEAAFARCHLTHGSWSALSGGSS*PTCRSP Trigger: TGGACTTCTACAAGTCGGGCAAGAAGATCCACCACT...GAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGCTGCCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CCA 90 bp | GGGCATCGAGTAAGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATGCCATGGGAGTAGACAAACCTaGGGAAGAGAAAGTCAAATC | + |
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Preference number: 4 (lower is better) Translates to: GHRVRQAGWVEAAFARCHGSRQT*GRESQI Trigger: GATTTGACTTTCTCTTCCCCAGGTTTGTCTACTCCC...ATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR GCA 90 bp | GTGCCTCAGAGCCAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGAAGTTAAATTTGTCCTaGATGGATGAAGCTATTCCT | + |
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Preference number: 4 (lower is better) Translates to: VPQSQRMGIQCCSGLQGMKLNLS*MDEAIP Trigger: AGGAATAGCTTCATCCATGCAGGACAAATTTAACTT...CATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTGGCTCTGAGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 90 bp | CAGGGCACAAAACCCTTGTCCAGAGGTGGCTCCCAGGGCCTGCGGTaGCTGAGCAGCAAGGACAGACACAGGCATCCCACAACCGTGAGC | + |
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Preference number: 5 (lower is better) Translates to: QGTKPLSRGGSQGLR*LSSKDRHRHPTTVS Trigger: GCTCACGGTTGTGGGATGCCTGTGTCTGTCCTTGCTGCTCAGGCACCGCAGGCCCTGGGAGCCACCTCTGGACAAGGGTTTTGTGCCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | GCATTTGCAAGATGCCATCTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGCAGGGCACAAAACCCTaGTCCAGAGGTGGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: AFARCHLTHGSWSALQDEQGTKP*SRGGSQ Trigger: CTGGGAGCCACCTCTGGACAAGGGTTTTGTGCCCTG...CTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAGATGGCATCTTGCAAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAGAGTTCCTCCAAGCCTaGCCCCATCAGATGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LTHGSWSALQDESSVGEPEFLQA*PHQMLG Trigger: ACCAAGCATCTGATGGGGCAAGGCTTGGAGGAACTC...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAGGCCTCATCCAGGTCTaGCTGCTTGTCCTTGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: LTHGSWSALQDESSVGEPGLIQV*LLVLGV Trigger: TACACCAAGGACAAGCAGCAAGACCTGGATGAGGCC...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | GGGCATCGAGTAAGGCAGGCTGGATGGGTTGAGGCAGCATTTGCAAGATGCCATAACCTGCCGGGGCACTaGGAAACACCCGAGCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: GHRVRQAGWVEAAFARCHNLPGH*ETPEPQ Trigger: TTGGGGCTCGGGTGTTTCCAAGTGCCCCGGCAGGTT...ATGGCATCTTGCAAATGCTGCCTCAACCCATCCAGCCTGCCTTACTCGATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 90 bp | CTTGAAGGCTGTGGGCTCAGGGTGGATGTCGGGGTCCATGTGTACTaGGAGATAGGGGAAGAGAGCCACCTTATCTCCGCGACGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: LEGCGLRVDVGVHVY*EIGEESHLISATDL Trigger: CAGATCCGTCGCGGAGATAAGGTGGCTCTCTTCCCCTATCTCTCAGTACACATGGACCCCGACATCCACCCTGAGCCCACAGCCTTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTCAGACCTGAGTCCAGCATGGCCTGGTaGAGTTCCTCCAAGCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: QRMGIQCCSGLQGMLRPESSMAW*SSSKPC Trigger: GCAAGGCTTGGAGGAACTCAACCAGGCCATGCTGGA...CTCAGGTCTGAGCATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTCAGACCTGAGAGGAACCGATCATACTaGAAGGCTGTGGGCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: QRMGIQCCSGLQGMLRPERNRSY*KAVGSG Trigger: CCCTGAGCCCACAGCCTTCAAGTATGATCGGTTCCT...CTCAGGTCTGAGCATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 90 bp | CAAAGAACCTGCCGGGGCACTTGGAAACACCCGAGCCCCAAGGCATaGTGTAGTGGTGGATCTTCTTGCCCGACTTGTAGAAGTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: QRTCRGTWKHPSPKA*CSGGSSCPTCRSPL Trigger: AAGTGGACTTCTACAAGTCGGGCAAGAAGATCCACCACTACAGCATGCCTTGGGGCTCGGGTGTTTCCAAGTGCCCCGGCAGGTTCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCATGGTACCCAAACACCTaGAGCACCAGTTCTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LTHGSWSALQDESSVGEPWYPNT*STSSFA Trigger: TGCAAAAGAACTGGTGCTCAAGGTGTTTGGGTACCA...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 90 bp | AAGGTGAAGTACTGGCCTCCCAGCTGCACCGTGAAGACATCCCCGTaGTTGGCCCGCATCCCCTTCAAGAATTCAAACATATTCTTCCGG | + |
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Preference number: 5 (lower is better) Translates to: KVKYWPPSCTVKTSP*LARIPFKNSNIFFR Trigger: CCGGAAGAATATGTTTGAATTCTTGAAGGGGATGCGGGCCAAGCACGGGGATGTCTTCACGGTGCAGCTGGGAGGCCAGTACTTCACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CCA 90 bp | CCTTTAGGCCCTAGCATCACCAAGGATAGGCTGTCCAGCATGGCCTaGTTGAGTTCCTCCAAGCCTTGCCCCATCAGATGCTTGGTACTA | + |
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Preference number: 5 (lower is better) Translates to: PLGPSITKDRLSSMA*LSSSKPCPIRCLVL Trigger: TAGTACCAAGCATCTGATGGGGCAAGGCTTGGAGGAACTCAACCAGGCCATGCTGGACAGCCTATCCTTGGTGATGCTAGGGCCTAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CCA 90 bp | GGTGGCACAGAGACGCAGACTCTCCTCCATCACGCTGTCCAACACTaGAGTGTGTTTCAGGGCACTGGGAGTGAAAGTGAACGACTTCTT | + |
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Preference number: 5 (lower is better) Translates to: GGTETQTLLHHAVQH*SVFQGTGSESERLL Trigger: AAGAAGTCGTTCACTTTCACTCCCAGTGCCCTGAAACACACTCCAGTGTTGGACAGCGTGATGGAGGAGAGTCTGCGTCTCTGTGCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CTGACTCACGGGAGCTGGTCTGCCCTCCAGGATGAGTCAAGTGTGGGTGAGCCAGTCTTTTTCCAGGTTTaGCTTCACAGAGAGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LTHGSWSALQDESSVGEPVFFQV*LHRESL Trigger: CAGAGACTCTCTGTGAAGCAAAACCTGGAAAAAGAC...TGGCTCACCCACACTTGACTCATCCTGGAGGGCAGACCAGCTCCCGTGAGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS-3UTR CAA 90 bp | CAGAGGATGGGTATTCAGTGCTGCTCTGGGCTGCAGGGTATGCTCAGACCTGAGAAAGTGAACGACTTCTaGGCTTCCAGCCTGGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: QRMGIQCCSGLQGMLRPEKVNDF*ASSLAL Trigger: TAAGGCCAGGCTGGAAGCCAAGAAGTCGTTCACTTT...CTCAGGTCTGAGCATACCCTGCAGCCCAGAGCAGCACTGAATACCCATCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CCA 90 bp | CCCGCATCCCCTTCAAGAATTCAAACATATTCTTCCGGAAAGCCATaGAGTGACCCAGCCAGGGCACAAAACCCTTGTCCAGAGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: PASPSRIQTYSSGKP*SDPARAQNPCPEVA Trigger: AGCCACCTCTGGACAAGGGTTTTGTGCCCTGGCTGGGTCACTCCATGGCTTTCCGGAAGAATATGTTTGAATTCTTGAAGGGGATGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 90 bp | ATCCCCTTCAAGAATTCAAACATATTCTTCCGGAAAGCCATGGAGTaGCCCAGCCAGGGCACAAAACCCTTGTCCAGAGGTGGCTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: IPFKNSNIFFRKAME*PSQGTKPLSRGGSQ Trigger: CTGGGAGCCACCTCTGGACAAGGGTTTTGTGCCCTGGCTGGGTCACTCCATGGCTTTCCGGAAGAATATGTTTGAATTCTTGAAGGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 90 bp | CCTTGCCCCATCAGATGCTTGGTACTAGCTAAGTGGATCATCCTGTaGTCCCCATCTACAGACTGGTACCCAAACACCTTGAGCACCAGT | + |
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Preference number: 5 (lower is better) Translates to: PCPIRCLVLAKWIIL*SPSTDWYPNTLSTS Trigger: ACTGGTGCTCAAGGTGTTTGGGTACCAGTCTGTAGATGGGGATCACAGGATGATCCACTTAGCTAGTACCAAGCATCTGATGGGGCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 90 bp | AGTAGACAAACCTGGGGAAGAGAAAGTCAAATCGACGGAACTTCCTaGACAGCTCATCGGCCTCATCCAGGTCTTGCTGCTTGTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SRQTWGRESQIDGTS*TAHRPHPGLAACPW Trigger: CCAAGGACAAGCAGCAAGACCTGGATGAGGCCGATGAGCTGTTCAGGAAGTTCCGTCGATTTGACTTTCTCTTCCCCAGGTTTGTCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 90 bp | CCCATCTACAGACTGGTACCCAAACACCTTGAGCACCAGTTCTTTTaGATAGGACTGGAAGTCCAGCGCTTTCTCTGTGTTCTTAATGAT | + |
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Preference number: 5 (lower is better) Translates to: PIYRLVPKHLEHQFF*IGLEVQRFLCVLND Trigger: ATCATTAAGAACACAGAGAAAGCGCTGGACTTCCAGTCCTATGCAAAAGAACTGGTGCTCAAGGTGTTTGGGTACCAGTCTGTAGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 90 bp | CTTGCTCCCTCAGAAACTGAAGCATGTAGCCTAACCAACAGCTTATaGCGTCTTTTTCCAGGTTTTGCTTCACAGAGAGTCTCTGATGGA | + |
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Preference number: 5 (lower is better) Translates to: LAPSETEACSLTNSL*RLFPGFASQRVSDG Trigger: TCCATCAGAGACTCTCTGTGAAGCAAAACCTGGAAAAAGACGGCATAAGCTGTTGGTTAGGCTACATGCTTCAGTTTCTGAGGGAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 72 bp | CCTTGTCCAGAGGTGGCTCCCAGGGCCTGCGGTGCCTaGGCAGCAAGGACAGACACAGGCATCCCACAACCG | + |
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Preference number: 6 (lower is better) Translates to: PCPEVAPRACGA*AARTDTGIPQP Trigger: CGGTTGTGGGATGCCTGTGTCTGTCCTTGCTGCTCAGGCACCGCAGGCCCTGGGAGCCACCTCTGGACAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 72 bp | CAGGCGATAGAGGAAGCGTACCTCATGGCTAGGCTGTaGGGTGCCAAAGCCCCAGCGCCTTGGGTCAATGGG | + |
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Preference number: 6 (lower is better) Translates to: QAIEEAYLMARL*GAKAPAPWVNG Trigger: CCCATTGACCCAAGGCGCTGGGGCTTTGGCACCTCACAGCCTAGCCATGAGGTACGCTTCCTCTATCGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 72 bp | GGGTCCATGACAAAGGTGAAGTACTGGCCTCCCAGCTaGACCGTGAAGACATCCCCGTGCTTGGCCCGCATC | + |
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Preference number: 6 (lower is better) Translates to: GSMTKVKYWPPS*TVKTSPCLARI Trigger: GATGCGGGCCAAGCACGGGGATGTCTTCACGGTGCAGCTGGGAGGCCAGTACTTCACCTTTGTCATGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CAA 72 bp | TTCCGGGTGCCATCCGGGTTGAGGAACCGATCATACTaGAAGGCTGTGGGCTCAGGGTGGATGTCGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: FRVPSGLRNRSY*KAVGSGWMSGS Trigger: GGACCCCGACATCCACCCTGAGCCCACAGCCTTCAAGTATGATCGGTTCCTCAACCCGGATGGCACCCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 72 bp | TGCCGGGGCACTTGGAAACACCCGAGCCCCAAGGCATaGTGTAGTGGTGGATCTTCTTGCCCGACTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: CRGTWKHPSPKA*CSGGSSCPTCR Trigger: TCTACAAGTCGGGCAAGAAGATCCACCACTACAGCATGCCTTGGGGCTCGGGTGTTTCCAAGTGCCCCGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CAA 90 bp | AAGTCCACTTTCCGGGTGCCATCCGGGTTGAGGAACCGATCATACTaGAAGGCTGTGGGCTCAGGGTGGATGTCGGGGTCCATGTGTACT | + |
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Preference number: 6 (lower is better) Translates to: KSTFRVPSGLRNRSY*KAVGSGWMSGSMCT Trigger: AGTACACATGGACCCCGACATCCACCCTGAGCCCACAGCCTTCAAGTATGATCGGTTCCTCAACCCGGATGGCACCCGGAAAGTGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 72 bp | CCGAGCCCCAAGGCATGCTGTAGTGGTGGATCTTCTTaGCCGACTTGTAGAAGTCCACTTTCCGGGTGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PSPKACCSGGSS*PTCRSPLSGCH Trigger: ATGGCACCCGGAAAGTGGACTTCTACAAGTCGGGCAAGAAGATCCACCACTACAGCATGCCTTGGGGCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CCA 72 bp | CCTAGCATCACCAAGGATAGGCTGTCCAGCATGGCCTaGTTGAGTTCCTCCAAGCCTTGCCCCATCAGATGC | + |
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Preference number: 6 (lower is better) Translates to: PSITKDRLSSMA*LSSSKPCPIRC Trigger: GCATCTGATGGGGCAAGGCTTGGAGGAACTCAACCAGGCCATGCTGGACAGCCTATCCTTGGTGATGCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CCA 72 bp | CTGGTGGCTTCCTCACGCACAGCCTTCATGGCATCCTaGTGCTTCAGCAGGAATAAGAGGACCCAGAAACAG | + |
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Preference number: 6 (lower is better) Translates to: LVASSRTAFMAS*CFSRNKRTQKQ Trigger: CTGTTTCTGGGTCCTCTTATTCCTGCTGAAGCACCAGGATGCCATGAAGGCTGTGCGTGAGGAAGCCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CAA 72 bp | TGGCCTCCCAGCTGCACCGTGAAGACATCCCCGTGCTaGGCCCGCATCCCCTTCAAGAATTCAAACATATTC | + |
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Preference number: 6 (lower is better) Translates to: WPPSCTVKTSPC*ARIPFKNSNIF Trigger: GAATATGTTTGAATTCTTGAAGGGGATGCGGGCCAAGCACGGGGATGTCTTCACGGTGCAGCTGGGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CAA 90 bp | TTAGGCCCTAGCATCACCAAGGATAGGCTGTCCAGCATGGCCTGGTaGAGTTCCTCCAAGCCTTGCCCCATCAGATGCTTGGTACTAGCT | + |
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Preference number: 6 (lower is better) Translates to: LGPSITKDRLSSMAW*SSSKPCPIRCLVLA Trigger: AGCTAGTACCAAGCATCTGATGGGGCAAGGCTTGGAGGAACTCAACCAGGCCATGCTGGACAGCCTATCCTTGGTGATGCTAGGGCCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CAA 90 bp | GTGAAGTACTGGCCTCCCAGCTGCACCGTGAAGACATCCCCGTGCTaGGCCCGCATCCCCTTCAAGAATTCAAACATATTCTTCCGGAAA | + |
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Preference number: 6 (lower is better) Translates to: VKYWPPSCTVKTSPC*ARIPFKNSNIFFRK Trigger: TTTCCGGAAGAATATGTTTGAATTCTTGAAGGGGATGCGGGCCAAGCACGGGGATGTCTTCACGGTGCAGCTGGGAGGCCAGTACTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 72 bp | CCGTCTTTTTCCAGGTTTTGCTTCACAGAGAGTCTCTaGTGGAAGAGACGCTGCAACTGGCTCACTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: PSFSRFCFTESL*WKRRCNWLTST Trigger: GGTGGAAGTGAGCCAGTTGCAGCGTCTCTTCCATCAGAGACTCTCTGTGAAGCAAAACCTGGAAAAAGACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS TCA 72 bp | AAGAATTCAAACATATTCTTCCGGAAAGCCATGGAGTaGCCCAGCCAGGGCACAAAACCCTTGTCCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: KNSNIFFRKAME*PSQGTKPLSRG Trigger: ACCTCTGGACAAGGGTTTTGTGCCCTGGCTGGGTCACTCCATGGCTTTCCGGAAGAATATGTTTGAATTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 72 bp | AGACTGGTACCCAAACACCTTGAGCACCAGTTCTTTTaGATAGGACTGGAAGTCCAGCGCTTTCTCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RLVPKHLEHQFF*IGLEVQRFLCV Trigger: AACACAGAGAAAGCGCTGGACTTCCAGTCCTATGCAAAAGAACTGGTGCTCAAGGTGTTTGGGTACCAGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CCA 72 bp | CCTTCAAGAATTCAAACATATTCTTCCGGAAAGCCATaGAGTGACCCAGCCAGGGCACAAAACCCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSRIQTYSSGKP*SDPARAQNPCP Trigger: TGGACAAGGGTTTTGTGCCCTGGCTGGGTCACTCCATGGCTTTCCGGAAGAATATGTTTGAATTCTTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS CAA 72 bp | TTCCCCTGGGAGGCCCAGAGCATCATAAAGTTAAATTaGTCCTGCATGGATGAAGCTATTCCTTGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FPWEAQSIIKLN*SCMDEAIPCSL Trigger: GAGGGAGCAAGGAATAGCTTCATCCATGCAGGACAAATTTAACTTTATGATGCTCTGGGCCTCCCAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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| CDS GCA 72 bp | TCAGAAACTGAAGCATGTAGCCTAACCAACAGCTTATaGCGTCTTTTTCCAGGTTTTGCTTCACAGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SETEACSLTNSL*RLFPGFASQRV Trigger: GACTCTCTGTGAAGCAAAACCTGGAAAAAGACGGCATAAGCTGTTGGTTAGGCTACATGCTTCAGTTTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062474.5 |
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