Pregenerated sensors for CYP7B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039519Ensembl transcript IDs: ENSMUST00000035625.7
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAATATAAATTTGCCATTTTCAAACAAGAGTAGCGGTTGCATTTaGGGGAGTGCACCAAATCACGGAGCTCAGCACATGCAGCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: PNINLPFSNKSSGCI*GSAPNHGAQHMQPY Trigger: GTAAGGCTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAATGGCAAATTTATATTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| 3UTR GCA 90 bp | TCTCAACCAAATATAAATTTGCCATTTTCAAACAAGAGTAGCGGTTaGATTTGGGGGAGTGCACCAAATCACGGAGCTCAGCACATGCAG | + |
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Preference number: 1 (lower is better) Translates to: SQPNINLPFSNKSSG*IWGSAPNHGAQHMQ Trigger: CTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAATGGCAAATTTATATTTGGTTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| 3UTR GCA 72 bp | TTTGGGGGAGTGCACCAAATCACGGAGCTCAGCACATaGAGCCTTACTCTGCAAAGCTTCTCTGCCACACTT | + |
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Preference number: 3 (lower is better) Translates to: FGGVHQITELST*SLTLQSFSATL Trigger: AAGTGTGGCAGAGAAGCTTTGCAGAGTAAGGCTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| 3UTR CCA 72 bp | AATTTGCCATTTTCAAACAAGAGTAGCGGTTGCATTTaGGGGAGTGCACCAAATCACGGAGCTCAGCACATG | + |
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Preference number: 3 (lower is better) Translates to: NLPFSNKSSGCI*GSAPNHGAQHM Trigger: CATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAATGGCAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | GGGAGTGCACCAAATCACGGAGCTCAGCACATGCAGCCTTACTCTGCAAAGCTTCCAGGTCCTTTCTTTTaGCCTGTTGACTGCAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GSAPNHGAQHMQPYSAKLPGPFF*PVDCRK Trigger: TTTCCTGCAGTCAACAGGTCAAAAGAAAGGACCTGG...AAGCTTTGCAGAGTAAGGCTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | GCATTTGGGGGAGTGCACCAAATCACGGAGCTCAGCACATGCAGCCTTACTCTGTCTTACTCTCTAAGCTaGGATTCATATCCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AFGGVHQITELSTCSLTLSYSLS*DSYPPA Trigger: TGCAGGAGGATATGAATCTCAGCTTAGAGAGTAAGA...CAGAGTAAGGCTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | AAGAGTAGCGGTTGCATTTGGGGGAGTGCACCAAATCACGGAGCTCAGCACATGTTCCTGAACAATTTTTaGCTGTCCTTGCATCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: KSSGCIWGSAPNHGAQHMFLNNF*LSLHLS Trigger: GCTCAGATGCAAGGACAGTCAAAAATTGTTCAGGAA...CATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGATGATGCTGGAGTATaGGCACAGCCTCAGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: PSLENGKLLDCPLKAQLSDDAGV*AQPQNL Trigger: GAGGTTCTGAGGCTGTGCTCATACTCCAGCATCATC...AGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTCCACAAGGAAGACAGTaGAAGTGTCACCATGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: PSLENGKLLDCPLKAQLSPQGRQ*KCHHVA Trigger: GGCAACATGGTGACACTTTCACTGTCTTCCTTGTGG...AGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | TTTTCAAACAAGAGTAGCGGTTGCATTTGGGGGAGTGCACCAAATCACGGAGCTCGGCTGCTGAACTTCTaGAAGCTTAATTGTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSNKSSGCIWGSAPNHGARLLNF*KLNCFG Trigger: CCCAAAACAATTAAGCTTTCAGAAGTTCAGCAGCCG...AGCTCCGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CCA 90 bp | TGCCATTTTCAAACAAGAGTAGCGGTTGCATTTGGGGGAGTGCACCAAATCACGTGTTCTCTGGTGAAGTaGACTGAAATTCCAGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: CHFQTRVAVAFGGVHQITCSLVK*TEIPGP Trigger: AGGACCTGGAATTTCAGTCCACTTCACCAGAGAACA...CGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAATGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | TTTTCAAACAAGAGTAGCGGTTGCATTTGGGGGAGTGCACCAAATCACGGAGCTAAAAACATCCGACTGTaGTTTAGCCCTATAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FSNKSSGCIWGSAPNHGAKNIRL*FSPIGF Trigger: GAAGCCTATAGGGCTAAATCACAGTCGGATGTTTTT...AGCTCCGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTCAGAGAAAGCCAAGATaGTGTGCTCCTATTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSLENGKLLDCPLKAQLSQRKPR*CAPISG Trigger: TCCTGAAATAGGAGCACATCATCTTGGCTTTCTCTG...AGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR GCA 90 bp | GAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAACAAGAATTTCAGGGCCATaGCAAGATAAGGAAGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: ENGKLLDCPLKAQLSGRTRISGP*QDKEAN Trigger: GTTGGCTTCCTTATCTTGGCATGGCCCTGAAATTCT...TGTTCTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CCA 90 bp | TCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGGTCATTGTGTATGAGTaGAGGAAAGAGGGCTACAAA | + |
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Preference number: 4 (lower is better) Translates to: SGKREIVRLSIEGTAFWQVIVYE*RKEGYK Trigger: TTTGTAGCCCTCTTTCCTCCACTCATACACAATGAC...CTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CCA 90 bp | TCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCTGCAAAATATCTCCCTaGACATTTGCTTGTTCCGAG | + |
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Preference number: 4 (lower is better) Translates to: SLENGKLLDCPLKAQLSGCKISP*TFACSE Trigger: CTCGGAACAAGCAAATGTCCAGGGAGATATTTTGCA...GCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | TCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAGATCTTGCCTTTCCTaGACAATTTTTGACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SGKREIVRLSIEGTAFWQRSCLS*TIFDCP Trigger: AGGACAGTCAAAAATTGTTCAGGAAAGGCAAGATCT...CTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR GCA 90 bp | TCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCGCTTCTCCAAGATTTTaGTTTGTACCTAAAGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: SLENGKLLDCPLKAQLSGASPRF*FVPKGD Trigger: GTCTCCTTTAGGTACAAAGCAAAATCTTGGAGAAGC...GCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | CCTTCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTTCACCATGTTGCCTTTaGAGAGTTTTCAAGAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: PSLENGKLLDCPLKAQLSSPCCL*RVFKKV Trigger: AACTTTCTTGAAAACTCTTCAAAGGCAACATGGTGA...AGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | ATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAACATAAAACCATATGACTGTCCTTGCATCTaGGCTACTTTTTCTGATGTG | + |
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Preference number: 4 (lower is better) Translates to: IVRLSIEGTAFWQNIKPYDCPCI*ATFSDV Trigger: CACATCAGAAAAAGTAGCTCAGATGCAAGGACAGTC...ATATGGTTTTATGTTCTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | ATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAACATAAAACCATATCTGATAATCGGCTGCTaGACTTCTGAAAGCTTAATT | + |
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Preference number: 4 (lower is better) Translates to: IVRLSIEGTAFWQNIKPYLIIGC*TSESLI Trigger: AATTAAGCTTTCAGAAGTTCAGCAGCCGATTATCAG...ATATGGTTTTATGTTCTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR TCA 90 bp | CCTGGTGATGTAGACGTTATTGATACTATACTTGAAGGGAAAATTTTCATACAGTCTGGTGAAGTGGACTaGAATTCCAGGTCCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PGDVDVIDTILEGKIFIQSGEVD*NSRSFL Trigger: AAGAAAGGACCTGGAATTTCAGTCCACTTCACCAGA...CTGTATGAAAATTTTCCCTTCAAGTATAGTATCAATAACGTCTACATCACCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR GCA 90 bp | ATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAACATAAAACCATATCTTCATTTCGTTCACTaGAAAATATCTCCCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: IVRLSIEGTAFWQNIKPYLHFVH*KISPWT Trigger: TGTCCAGGGAGATATTTTGCAGTGAACGAAATGAAG...ATATGGTTTTATGTTCTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS CCA 90 bp | TTTCAGGGCCATGCCAAGATAAGGAAGCCAACCTTTTATCAAGGGTaGTTCACGAGGGCGCCTGGTGCGCCGGGTAAGGAGGAACAGGGC | + |
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Preference number: 5 (lower is better) Translates to: FQGHAKIRKPTFYQG*FTRAPGAPGKEEQG Trigger: GCCCTGTTCCTCCTTACCCGGCGCACCAGGCGCCCTCGTGAACCACCCTTGATAAAAGGTTGGCTTCCTTATCTTGGCATGGCCCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 90 bp | GCTGAGATTCATATCCTCCTGCACTTCTCGGATGATGCTGGAGTATaGGCACAGCCTCAGAACCTCAAGAATAGTGCTTTCCAGGCAGAC | + |
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Preference number: 5 (lower is better) Translates to: AEIHILLHFSDDAGV*AQPQNLKNSAFQAD Trigger: GTCTGCCTGGAAAGCACTATTCTTGAGGTTCTGAGGCTGTGCTCATACTCCAGCATCATCCGAGAAGTGCAGGAGGATATGAATCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | CATTTGGGGGAGTGCACCAAATCACGGAGCTCAGCACATGCAGCCTTACTCTGCCTTTCTTTTGACCTGTaGACTGCAGGAAACTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: HLGECTKSRSSAHAALLCLSFDL*TAGNCQ Trigger: TTGACAGTTTCCTGCAGTCAACAGGTCAAAAGAAAG...GCAGAGTAAGGCTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCCCCAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | GGGAGTGCACCAAATCACGGAGCTCAGCACATGCAGCCTTACTCTGCAAAGCTTCTCCAAGATTTTGCTTaGTACCTAAAGGAGACGGCA | + |
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Preference number: 5 (lower is better) Translates to: GSAPNHGAQHMQPYSAKLLQDFA*YLKETA Trigger: TGCCGTCTCCTTTAGGTACAAAGCAAAATCTTGGAG...AAGCTTTGCAGAGTAAGGCTGCATGTGCTGAGCTCCGTGATTTGGTGCACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS GCA 90 bp | CGCAGAGAGAAACTCTTACTCTCTAAGCTGAGATTCATATCCTCCTaGACTTCTCGGATGATGCTGGAGTATGAGCACAGCCTCAGAACC | + |
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Preference number: 5 (lower is better) Translates to: RREKLLLSKLRFISS*TSRMMLEYEHSLRT Trigger: GGTTCTGAGGCTGTGCTCATACTCCAGCATCATCCGAGAAGTGCAGGAGGATATGAATCTCAGCTTAGAGAGTAAGAGTTTCTCTCTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | TGCCATTTTCAAACAAGAGTAGCGGTTGCATTTGGGGGAGTGCACCAAATCACGTCCCTGGACATTTGCTaGTTCCGAGTCCAAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: CHFQTRVAVAFGGVHQITSLDIC*FRVQKA Trigger: TGCCTTTTGGACTCGGAACAAGCAAATGTCCAGGGA...CGTGATTTGGTGCACTCCCCCAAATGCAACCGCTACTCTTGTTTGAAAATGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 90 bp | AATTGTTCTCTGGTGAAGTGGACTGAAATTCCAGGTCCTTTCTTTTaGCCTGTTGACTGCAGGAAACTGTCAATTTCGTCACGCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: NCSLVKWTEIPGPFF*PVDCRKLSISSRRA Trigger: AGCCCTGCGTGACGAAATTGACAGTTTCCTGCAGTCAACAGGTCAAAAGAAAGGACCTGGAATTTCAGTCCACTTCACCAGAGAACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | TCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAAGATTTCCGGGTCATaGTGTATGAGTGGAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLENGKLLDCPLKAQLSGKISGS*CMSGGK Trigger: CTTTCCTCCACTCATACACAATGACCCGGAAATCTT...GCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS CCA 90 bp | AAATTCCTTTGGAGCATCGAAGATTTCCGGGTCATTGTGTATGAGTaGAGGAAAGAGGGCTACAAAATCTCCTTTCCGCAGAGAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: KFLWSIEDFRVIVYE*RKEGYKISFPQRET Trigger: AGTTTCTCTCTGCGGAAAGGAGATTTTGTAGCCCTCTTTCCTCCACTCATACACAATGACCCGGAAATCTTCGATGCTCCAAAGGAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | TCTCTGGAAAACGGGAAATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCTTTCCTGAACAATTTTaGACTGTCCTTGCATCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SLENGKLLDCPLKAQLSGFPEQF*TVLASE Trigger: CTCAGATGCAAGGACAGTCAAAAATTGTTCAGGAAA...GCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAATTTCCCGTTTTCCAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS CCA 90 bp | TTTCTTCTTACCATCTTCTATGAAGCGATCGAACCTAAATTCCTTTaGAGCATCGAAGATTTCCGGGTCATTGTGTATGAGTGGAGGAAA | + |
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Preference number: 5 (lower is better) Translates to: FLLTIFYEAIEPKFL*SIEDFRVIVYEWRK Trigger: TTTCCTCCACTCATACACAATGACCCGGAAATCTTCGATGCTCCAAAGGAATTTAGGTTCGATCGCTTCATAGAAGATGGTAAGAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | CCTGGTGATGTAGACGTTATTGATACTATACTTGAAGGGAAAATTTTCATACAGGACCAAGCTGTCCAATaGTTCTCTGGTGAAGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: PGDVDVIDTILEGKIFIQDQAVQ*FSGEVD Trigger: GTCCACTTCACCAGAGAACAATTGGACAGCTTGGTC...CTGTATGAAAATTTTCCCTTCAAGTATAGTATCAATAACGTCTACATCACCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | ATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAACATAAAACCATATGAAAGTGTCACCATGTaGCCTTTGAAGAGTTTTCAA | + |
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Preference number: 5 (lower is better) Translates to: IVRLSIEGTAFWQNIKPYESVTM*PLKSFQ Trigger: TTGAAAACTCTTCAAAGGCAACATGGTGACACTTTC...ATATGGTTTTATGTTCTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 90 bp | AAGGGTTCAGAACAAATGTTATATACTTCCCCACAAGGAAGACAGTaGAAGTGTCACCATGTTGCCTTTGAAGAGTTTTCAAGAAAGTTA | + |
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Preference number: 5 (lower is better) Translates to: KGSEQMLYTSPQGRQ*KCHHVAFEEFSRKL Trigger: TAACTTTCTTGAAAACTCTTCAAAGGCAACATGGTGACACTTTCACTGTCTTCCTTGTGGGGAAGTATATAACATTTGTTCTGAACCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS-3UTR CAA 90 bp | ATTGTTAGACTGTCCATTGAAGGCACAGCTTTCTGGCAGAACATAAAACCATATTCTTTTCAGCAGATCTaGCCTTTCCTGAACAATTTT | + |
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Preference number: 5 (lower is better) Translates to: IVRLSIEGTAFWQNIKPYSFQQI*PFLNNF Trigger: AAAATTGTTCAGGAAAGGCAAGATCTGCTGAAAAGA...ATATGGTTTTATGTTCTGCCAGAAAGCTGTGCCTTCAATGGACAGTCTAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS CCA 90 bp | TCTGTGATTTTTAGCAGTTGGGACTCAAATAATTCTTTTACTTCTTaGATCATAGTTTCCAGAAGAGCATCCAAAGGTTTGCCTTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: SVIFSSWDSNNSFTS*IIVSRRASKGLPCR Trigger: TCTACAAGGCAAACCTTTGGATGCTCTTCTGGAAACTATGATCCAAGAAGTAAAAGAATTATTTGAGTCCCAACTGCTAAAAATCACAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS CCA 72 bp | CATGCCAAGATAAGGAAGCCAACCTTTTATCAAGGGTaGTTCACGAGGGCGCCTGGTGCGCCGGGTAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: HAKIRKPTFYQG*FTRAPGAPGKE Trigger: CTCCTTACCCGGCGCACCAGGCGCCCTCGTGAACCACCCTTGATAAAAGGTTGGCTTCCTTATCTTGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 72 bp | CATATCCTCCTGCACTTCTCGGATGATGCTGGAGTATaGGCACAGCCTCAGAACCTCAAGAATAGTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: HILLHFSDDAGV*AQPQNLKNSAF Trigger: GAAAGCACTATTCTTGAGGTTCTGAGGCTGTGCTCATACTCCAGCATCATCCGAGAAGTGCAGGAGGATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 72 bp | CCTTTGGAGCATCGAAGATTTCCGGGTCATTGTGTATaGGTGGAGGAAAGAGGGCTACAAAATCTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: PLEHRRFPGHCV*VEERGLQNLLS Trigger: GGAAAGGAGATTTTGTAGCCCTCTTTCCTCCACTCATACACAATGACCCGGAAATCTTCGATGCTCCAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 72 bp | TTTCCAGGCAGACCAAGCTGTCCAATTGTTCTCTGGTaGAGTGGACTGAAATTCCAGGTCCTTTCTTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: FPGRPSCPIVLW*SGLKFQVLSFD Trigger: GTCAAAAGAAAGGACCTGGAATTTCAGTCCACTTCACCAGAGAACAATTGGACAGCTTGGTCTGCCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS TCA 72 bp | CTGGTGAAGTGGACTGAAATTCCAGGTCCTTTCTTTTaGCCTGTTGACTGCAGGAAACTGTCAATTTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: LVKWTEIPGPFF*PVDCRKLSISS Trigger: TGACGAAATTGACAGTTTCCTGCAGTCAACAGGTCAAAAGAAAGGACCTGGAATTTCAGTCCACTTCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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| CDS CCA 72 bp | ACCATCTTCTATGAAGCGATCGAACCTAAATTCCTTTaGAGCATCGAAGATTTCCGGGTCATTGTGTATGAG | + |
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Preference number: 6 (lower is better) Translates to: TIFYEAIEPKFL*SIEDFRVIVYE Trigger: CTCATACACAATGACCCGGAAATCTTCGATGCTCCAAAGGAATTTAGGTTCGATCGCTTCATAGAAGATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035625.7 |
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