Pregenerated sensors for CYP7A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028240Ensembl transcript IDs: ENSMUST00000029905.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCATCTCACACCAGGGTAAATGCCAGGAGGATGTGGCAACCTCCTaGAATTCAAGGGCACTGCGGCAAGTTGGCTATGCTAGCCTAAGC | + |
|
Preference number: 1 (lower is better) Translates to: LISHQGKCQEDVATS*NSRALRQVGYASLS Trigger: GCTTAGGCTAGCATAGCCAACTTGCCGCAGTGCCCTTGAATTGCAGGAGGTTGCCACATCCTCCTGGCATTTACCCTGGTGTGAGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR GCA 90 bp | GACAAAGCACTTGCCCTTCTGAAGCTCATCTCACACCAGGGTAAATaGCAGGAGGATGTGGCAACCTCCTGCAATTCAAGGGCACTGCGG | + |
|
Preference number: 1 (lower is better) Translates to: DKALALLKLISHQGK*QEDVATSCNSRALR Trigger: CCGCAGTGCCCTTGAATTGCAGGAGGTTGCCACATCCTCCTGGCATTTACCCTGGTGTGAGATGAGCTTCAGAAGGGCAAGTGCTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CCA 90 bp | AGGGCACTGCGGCAAGTTGGCTATGCTAGCCTAAGCATTGGACTCTaGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACA | + |
|
Preference number: 1 (lower is better) Translates to: RALRQVGYASLSIGL*LKGETLKGEQWRKT Trigger: TGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGTCCAATGCTTAGGCTAGCATAGCCAACTTGCCGCAGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR GCA 90 bp | GATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTaGTCCAGCCCTCGCAGACAAAAGCATGGTATTGAATTTACTGTC | + |
|
Preference number: 1 (lower is better) Translates to: DLALCWRTCTASTGP*SSPRRQKHGIEFTV Trigger: GACAGTAAATTCAATACCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR GCA 90 bp | CTTCCTATAACAAGGCAAAGCAGGAAGCACAGTGAGTTCCAAGCTTaGTTAAGCTACGCGGAATGTTCCAGCCTGGGATGCTATGGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: LPITRQSRKHSEFQA*LSYAECSSLGCYGP Trigger: AGGCCCATAGCATCCCAGGCTGGAACATTCCGCGTAGCTTAAGCAAGCTTGGAACTCACTGTGCTTCCTGCTTTGCCTTGTTATAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CCA 90 bp | CCAAGCTTGCTTAAGCTACGCGGAATGTTCCAGCCTGGGATGCTATaGGCCTCTGTCAAAATGAAAAAGGAAGGAAGCATAGCGTACCTA | + |
|
Preference number: 1 (lower is better) Translates to: PSLLKLRGMFQPGML*ASVKMKKEGSIAYL Trigger: TAGGTACGCTATGCTTCCTTCCTTTTTCATTTTGACAGAGGCCCATAGCATCCCAGGCTGGAACATTCCGCGTAGCTTAAGCAAGCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR TCA 90 bp | AAGAACAGAGTTCTTCTCACTAATACAGCTACTAGGGGGCTTCAGTaGGCACTAGTCCCAAAGGCCTGTTTACTGATAACGCTCAGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: KNRVLLTNTATRGLQ*ALVPKACLLITLSS Trigger: ACTGCTGAGCGTTATCAGTAAACAGGCCTTTGGGACTAGTGCTCACTGAAGCCCCCTAGTAGCTGTATTAGTGAGAAGAACTCTGTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR TCA 90 bp | GGTAATAACTCTGTGCCAGTATTCAGTGGTAAGGTTTTAAGATTTTaGGGAGTCTGTGGATTTAGCTCTCTGCTGGAGGACCTGCACAGC | + |
|
Preference number: 1 (lower is better) Translates to: GNNSVPVFSGKVLRF*GVCGFSSLLEDLHS Trigger: GCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCCACAGACTCCTCAAAATCTTAAAACCTTACCACTGAATACTGGCACAGAGTTATTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR TCA 90 bp | GACAGGCTATTGTTTGCTAGCCATCACTTCACAAGAATAAAAATATaGGAAGAAGGCACCACCAGGAGACCCATCATTCTGTATGAAAAA | + |
|
Preference number: 1 (lower is better) Translates to: DRLLFASHHFTRIKI*EEGTTRRPIILYEK Trigger: TTTTTCATACAGAATGATGGGTCTCCTGGTGGTGCCTTCTTCTCATATTTTTATTCTTGTGAAGTGATGGCTAGCAAACAATAGCCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGGCTTAAAAGACTCATaGTGTGGTTCTTGGAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GPAQHPLDPAPALADKSMGLKDS*CGSWRC Trigger: GCACCTCCAAGAACCACACCATGAGTCTTTTAAGCC...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAATCATGGTGTGGTTCTTaGAGGTGCCTTTATAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: LEDLHSIHWTLLQPSQTKSWCGS*RCLYNF Trigger: GAAATTATAAAGGCACCTCCAAGAACCACACCATGA...TTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAAAGATTTGCCTGGCTTTaGCTCATGGGAGCTGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: TLAQGRDPQGRTVEENTQRFAWL*LMGAGI Trigger: AATTCCAGCTCCCATGAGGCAAAGCCAGGCAAATCT...TTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTACAAGAATAAAAATATaGGAAGAAGGCACCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RPSRENSGGKHSTSPPASTRIKI*EEGTTR Trigger: CCTGGTGGTGCCTTCTTCTCATATTTTTATTCTTGT...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATTGGACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAATTCTTTCTTTCTCCGTaGCTTTCTACAACAAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: ALDSGSRERPSRENSGGKFFLSP*LSTTNH Trigger: ATGGTTTGTTGTAGAAAGGCACGGAGAAAGAAAGAA...TTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGTCCAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR TCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTAAGGTTTTAAGATTTTaGGGAGTCTGTGGATTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RPSRENSGGKHSTSPPASKVLRF*GVCGFS Trigger: GCTAAATCCACAGACTCCTCAAAATCTTAAAACCTT...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR GCA 72 bp | GAGGAGTCTGTGGATTTAGCTCTCTGCTGGAGGACCTaGACAGCATCCACTGGACCCTGCTCCAGCCCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: EESVDLALCWRT*TASTGPCSSPR Trigger: GCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCCACAGACTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CCA 72 bp | TTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTaGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: FSSLLEDLHSIH*TLLQPSQTKAW Trigger: CCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR GCA 72 bp | CTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTaGTCCAGCCCTCGCAGACAAAAGCATGGTATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCWRTCTASTGP*SSPRRQKHGIE Trigger: TTCAATACCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGTTCTGTAGTCCTGGCTaGTCTAGAGCTGATGTAGAC | + |
|
Preference number: 3 (lower is better) Translates to: GPAQHPLDPAPALADKSMFCSPG*SRADVD Trigger: GTCTACATCAGCTCTAGACAAGCCAGGACTACAGAA...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CCA 72 bp | CGGCAAGTTGGCTATGCTAGCCTAAGCATTGGACTCTaGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RQVGYASLSIGL*LKGETLKGEQW Trigger: CCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGTCCAATGCTTAGGCTAGCATAGCCAACTTGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CCA 72 bp | AGCTCATCTCACACCAGGGTAAATGCCAGGAGGATGTaGCAACCTCCTGCAATTCAAGGGCACTGCGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSSHTRVNARRM*QPPAIQGHCGK Trigger: CTTGCCGCAGTGCCCTTGAATTGCAGGAGGTTGCCACATCCTCCTGGCATTTACCCTGGTGTGAGATGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CCA 72 bp | CTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTaGAGGAAAACACTCAACATCACCTCCAGCCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LWLKGETLKGEQ*RKTLNITSSLY Trigger: GTAGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR GCA 72 bp | ACAAGGCAAAGCAGGAAGCACAGTGAGTTCCAAGCTTaGTTAAGCTACGCGGAATGTTCCAGCCTGGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: TRQSRKHSEFQA*LSYAECSSLGC Trigger: GCATCCCAGGCTGGAACATTCCGCGTAGCTTAAGCAAGCTTGGAACTCACTGTGCTTCCTGCTTTGCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTGAGATTTGCCTGGCTTaGCCTCATGGGAGCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPSRENSGGKHSTSPPASEICLA*PHGSWN Trigger: ATTCCAGCTCCCATGAGGCAAAGCCAGGCAAATCTC...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTCAGACTCATAGAGATTaGCCTGGCTTTGCCTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: RPSRENSGGKHSTSPPASQTHRD*PGFASW Trigger: CCATGAGGCAAAGCCAGGCAAATCTCTATGAGTCTG...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR-3UTR CAA 90 bp | GGATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCTCAGCCTTTCATTATaGTTCTTCATCTTTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFSSLLEDLHSIHWTLLQLSLSL*FFIFKA Trigger: TGCCTTAAAGATGAAGAACAATAATGAAAGGCTGAG...CTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR TCA 72 bp | AAACTCAGGCCCCAGCTACACGAATCCCCAGGAACGTaGGCAGTAAGAACAGAGTTCTTCTCACTAATACAG | + |
|
Preference number: 3 (lower is better) Translates to: KLRPQLHESPGT*AVRTEFFSLIQ Trigger: CTGTATTAGTGAGAAGAACTCTGTTCTTACTGCTCACGTTCCTGGGGATTCGTGTAGCTGGGGCCTGAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGAAGCCTGCCCGGGACTaGTCTAGAGGGGGACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSLLEDLHSIHWTLLQKPARD*SRGGHL Trigger: CAAGTGTCCCCCTCTAGATCAGTCCCGGGCAGGCTT...CTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCATACATCCCTTCCGTaGCCCAGACAGCGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFSSLLEDLHSIHWTLLQHTSLP*PRQRSL Trigger: CAAAGAGCGCTGTCTGGGTCACGGAAGGGATGTATG...CTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGGAATGGTGTTTGCTTaGGATGCCCAGAGGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: LEDLHSIHWTLLQPSQTKGMVFA*DAQRIT Trigger: CGTGATCCTCTGGGCATCTCAAGCAAACACCATTCC...TTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR GCA 90 bp | GGATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCGGATATTCAAGGATaGACTGGAGAGCCGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GFSSLLEDLHSIHWTLLQPDIQG*TGEPQS Trigger: GCTCTGCGGCTCTCCAGTGCATCCTTGAATATCCGG...CTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGCCAGAGCTGAGCTCTTaGCCAGCACTCTGTAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPAQHPLDPAPALADKSMPELSS*PALCNA Trigger: AGCATTACAGAGTGCTGGCCAAGAGCTCAGCTCTGG...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR GCA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGTGCAGGAATGGTGTTTaGTTGAGATGCCCAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPAQHPLDPAPALADKSMCRNGV*LRCPED Trigger: ATCCTCTGGGCATCTCAAGCAAACACCATTCCTGCA...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAACACTTCTTCAGAGGCTaGTTTCATTGCTTCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEDLHSIHWTLLQPSQTKHFFRG*FHCFRA Trigger: AGCCCTGAAGCAATGAAAGCAGCCTCTGAAGAAGTG...TTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTCATTCCCTCCAGAGCTaGGCTCTTGGCCAGCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPSRENSGGKHSTSPPASHSLQS*ALGQHS Trigger: AGAGTGCTGGCCAAGAGCTCAGCTCTGGAGGGAATG...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGGTATTTCCATCACTTaGGTCTATGCTTCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPAQHPLDPAPALADKSMGISIT*VYASVS Trigger: GGACACAGAAGCATAGACCCAAGTGATGGAAATACC...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGCACAGAGCATCTCCCTaGAGGGTTTTGTTAAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPAQHPLDPAPALADKSMHRASP*RVLLKV Trigger: GACTTTTAACAAAACCCTCCAGGGAGATGCTCTGTG...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | ACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATGGCTTCAGAGAGTaGACACAGAGCATCTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLAQGRDPQGRTVEENTQHGFRE*TQSISL Trigger: CAGGGAGATGCTCTGTGTTCACTCTCTGAAGCCATG...TTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGTGGGTAAAGAGCTATaGTGTCATCTTTTCGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LEDLHSIHWTLLQPSQTKVGKEL*CHLFEC Trigger: ACATTCGAAAAGATGACATCATAGCTCTTTACCCAC...TTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | GGATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGACATATTGTAGCTCCTaGTCCAAAGGGCATGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GFSSLLEDLHSIHWTLLQTYCSS*SKGHVE Trigger: TTCTACATGCCCTTTGGATCAGGAGCTACAATATGT...CTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGCTTGGTCAAATTGTTTaGAGCTGTCAAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GPAQHPLDPAPALADKSMLGQIV*SCQGCF Trigger: AAAACAACCTTGACAGCTTCAAACAATTTGACCAAG...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGTATTGAATTTACTGTCGGTGTTTGCTTGAGATaGCCAGAGGATCACGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TGPCSSPRRQKHGIEFTVGVCLR*PEDHEV Trigger: CACCTCGTGATCCTCTGGGCATCTCAAGCAAACACC...GACAGTAAATTCAATACCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAAAGCACAGCCCAGGTATaGAATCAACCCGTTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLAQGRDPQGRTVEENTQSTAQV*NQPVVQ Trigger: TTGGACAACGGGTTGATTCCATACCTGGGCTGTGCT...TTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAATGTTTATGTTTTCCGTaGTATTTCCATCACTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LEDLHSIHWTLLQPSQTKCLCFP*YFHHLG Trigger: ACCCAAGTGATGGAAATACCACGGAAAACATAAACA...TTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | GCATTGGACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAAGGAATTCAAGAGGATTaGATCCGAACTTCAGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDSGSRERPSRENSGGKGIQED*IRTSEH Trigger: GTGCTCTGAAGTTCGGATCCAATCCTCTTGAATTCC...TTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGTCCAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAAAGAAGGTTGCAGGAATaGTGTTTGCTTGAGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLAQGRDPQGRTVEENTQRRLQE*CLLEMP Trigger: GGGCATCTCAAGCAAACACCATTCCTGCAACCTTCT...TTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTGGGCTCCTGATCATTTaGAATAAGCTCCAGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPSRENSGGKHSTSPPASGLLII*NKLQKV Trigger: AACCTTCTGGAGCTTATTTCAAATGATCAGGAGCCC...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR GCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTATAGAAGGTGGTCTTTaGTTTCCCACTTTCATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RPSRENSGGKHSTSPPASIEGGL*FPTFIK Trigger: CTTGATGAAAGTGGGAAAGCAAAGACCACCTTCTAT...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTGAGTTTGTGATGAAGTaGACATATTTCCCCATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPSRENSGGKHSTSPPASEFVMK*TYFPIS Trigger: ACTGATGGGGAAATATGTCCACTTCATCACAAACTC...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | AGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAACATCACCTCCAGCCTCTTTGCAGGTAAAAACATaGCCATGTTTCCTTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RPSRENSGGKHSTSPPASLQVKT*PCFLCF Trigger: AAAGCAAAGGAAACATGGCCATGTTTTTACCTGCAA...AGAGGCTGGAGGTGATGTTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGTATTGAATTTACTGTCCTGTCAAGGTTGTTTTaGATAAATGCTCTTTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGPCSSPRRQKHGIEFTVLSRLF*INALCE Trigger: CTCACAAAGAGCATTTATTCAAAACAACCTTGACAG...GACAGTAAATTCAATACCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CCA 90 bp | ACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGTATTGAATTTACTGTCAATTGCTTGATTTCTTaGACAGCAAATAGTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGPCSSPRRQKHGIEFTVNCLIS*TANSLP Trigger: TGGAAGACTATTTGCTGTCCAAGAAATCAAGCAATT...GACAGTAAATTCAATACCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CAA 72 bp | TTTCTTTTTAGACAAGGTCCTTTCTGTAGTCCTGGCTaGTCTAGAGCTGATGTAGACCAGAATAACCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLFRQGPFCSPG*SRADVDQNNLR Trigger: TCTGAGGTTATTCTGGTCTACATCAGCTCTAGACAAGCCAGGACTACAGAAAGGACCTTGTCTAAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| 3UTR CAA 72 bp | ACAGAAACGGGAAGAGTAACTTTGGTTGACAGGCTATaGTTTGCTAGCCATCACTTCACAAGAATAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: TETGRVTLVDRL*FASHHFTRIKI Trigger: TATTTTTATTCTTGTGAAGTGATGGCTAGCAAACAATAGCCTGTCAACCAAAGTTACTCTTCCCGTTTCTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGACAGATTGGAGGTTTaGCATCATGGCTTCAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GPAQHPLDPAPALADKSMDRLEV*HHGFRE Trigger: CTCTCTGAAGCCATGATGCAAAACCTCCAATCTGTC...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | GGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGTATTTCCCCATCAGTTaGCAGGTAAAAACATGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPAQHPLDPAPALADKSMYFPIS*QVKTWP Trigger: TGGCCATGTTTTTACCTGCAAACTGATGGGGAAATA...CATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | GGATTTAGCTCTCTGCTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGTGGTATTTCCATCACTaGGGTCTATGCTTCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GFSSLLEDLHSIHWTLLQWYFHH*GLCFCV Trigger: GACACAGAAGCATAGACCCAAGTGATGGAAATACCA...CTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAGCAGAGAGCTAAATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 90 bp | GTAGCAGAAGGCATACATCCCTTCCGTGACCCAGACAGCGCTCTTTaGTTTAGGAAGGCCCGGAGGTCTCATGACAGATTGGAGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VAEGIHPFRDPDSAL*FRKARRSHDRLEVL Trigger: CAAAACCTCCAATCTGTCATGAGACCTCCGGGCCTTCCTAAATCAAAGAGCGCTGTCTGGGTCACGGAAGGGATGTATGCCTTCTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGACCTGCACAGCATCCACTGGACCCTGCTCCAGCCCTCGCAGACAAAATCTCCCTGGAGGGTTTaGTTAAAAGTCTTGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: LEDLHSIHWTLLQPSQTKSPWRV*LKVLFM Trigger: CATAAACAAGACTTTTAACAAAACCCTCCAGGGAGA...TTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGTGGATGCTGTGCAGGTCCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 90 bp | TCAATATCATTTAGTGGTGGCAAAATTCCCAAGCCTGCCCGGGACTaGTCTAGAGGGGGACACTTGGTGTGGCTCTCTACAAGCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SISFSGGKIPKPARD*SRGGHLVWLSTSSS Trigger: ACTGGAGCTTGTAGAGAGCCACACCAAGTGTCCCCCTCTAGATCAGTCCCGGGCAGGCTTGGGAATTTTGCCACCACTAAATGATATTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAATTGCAGGAATGGTGTTaGCTTGAGATGCCCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLAQGRDPQGRTVEENTQLQEWC*LEMPRG Trigger: TCCTCTGGGCATCTCAAGCAAACACCATTCCTGCAA...TTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 90 bp | TTTGATTTAGGAAGGCCCGGAGGTCTCATGACAGATTGGAGGTTTTaGATCATGGCTTCAGAGAGTGAACACAGAGCATCTCCCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FDLGRPGGLMTDWRF*IMASESEHRASPWR Trigger: CCTCCAGGGAGATGCTCTGTGTTCACTCTCTGAAGCCATGATGCAAAACCTCCAATCTGTCATGAGACCTCCGGGCCTTCCTAAATCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 90 bp | AGTGTATCGTTGAGAAACATGCGTAGACGGATCAGTTCAGAGACCTaGTCCCTCATGTACAGGTTCTTGTGCTTCAAGCTCTCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVSLRNMRRRISSET*SLMYRFLCFKLSAS Trigger: GCTGGCTGAGAGCTTGAAGCACAAGAACCTGTACATGAGGGACCAGGTCTCTGAACTGATCCGTCTACGCATGTTTCTCAACGATACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAACACTCAAAGGTCTCATGACAGATaGGAGGTTTTGCATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLAQGRDPQGRTVEENTQRSHDR*EVLHHG Trigger: GCCATGATGCAAAACCTCCAATCTGTCATGAGACCT...TTGAGTGTTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | GCATTGGACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAAATAAGCTCCAGAAGGTaGCAGGAATGGTGTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALDSGSRERPSRENSGGKISSRR*QEWCLL Trigger: AAGCAAACACCATTCCTGCAACCTTCTGGAGCTTAT...TTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGTCCAATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 90 bp | ACAGCGCTCTTTGATTTAGGAAGGCCCGGAGGTCTCATGACAGATTaGAGGTTTTGCATCATGGCTTCAGAGAGTGAACACAGAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TALFDLGRPGGLMTD*RFCIMASESEHRAS Trigger: AGATGCTCTGTGTTCACTCTCTGAAGCCATGATGCAAAACCTCCAATCTGTCATGAGACCTCCGGGCCTTCCTAAATCAAAGAGCGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 90 bp | GAATTCAAGAGGATTGGATCCGAACTTCAGAGCACAGCCCAGGTATaGAATCAACCCGTTGTCCAAAGGAGGTTCACCTACTTTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EFKRIGSELQSTAQV*NQPVVQRRFTYFPS Trigger: AGAAGGAAAGTAGGTGAACCTCCTTTGGACAACGGGTTGATTCCATACCTGGGCTGTGCTCTGAAGTTCGGATCCAATCCTCTTGAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 90 bp | CATGGCCATGTTTCCTTTGCTTTGCTCTTAGGAATTCAAGAGGATTaGATCCGAACTTCAGAGCACAGCCCAGGTATGGAATCAACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HGHVSFALLLGIQED*IRTSEHSPGMESTR Trigger: ACGGGTTGATTCCATACCTGGGCTGTGCTCTGAAGTTCGGATCCAATCCTCTTGAATTCCTAAGAGCAAAGCAAAGGAAACATGGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 90 bp | TGTTTAGTTGCTCTTGATCCAAGTAAATGGCATTCCCTCCAGAGCTaGGCTCTTGGCCAGCACTCTGTAATGCTCCATTCACTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLVALDPSKWHSLQS*ALGQHSVMLHSLLQ Trigger: CTGAAGAAGTGAATGGAGCATTACAGAGTGCTGGCCAAGAGCTCAGCTCTGGAGGGAATGCCATTTACTTGGATCAAGAGCAACTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | GCATTGGACTCTGGCTCAAGGGAGAGACCCTCAAGGGAGAACAGTGGAGGAAAAACTTGGTCAAATTGTTaGAAGCTGTCAAGGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALDSGSRERPSRENSGGKTWSNC*KLSRLF Trigger: AAACAACCTTGACAGCTTCAAACAATTTGACCAAGT...TTTTCCTCCACTGTTCTCCCTTGAGGGTCTCTCCCTTGAGCCAGAGTCCAATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS-3UTR CAA 90 bp | ACTGGACCCTGCTCCAGCCCTCGCAGACAAAAGCATGGTATTGAATTTACTGTCTATAGAAGGTGGTCTTaGCTTTCCCACTTTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGPCSSPRRQKHGIEFTVYRRWS*LSHFHQ Trigger: TTGATGAAAGTGGGAAAGCAAAGACCACCTTCTATA...GACAGTAAATTCAATACCATGCTTTTGTCTGCGAGGGCTGGAGCAGGGTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 90 bp | TATTTCCCCATCAGTTTGCAGGTAAAAACATGGCCATGTTTCCTTTaGTTTGCTCTTAGGAATTCAAGAGGATTGGATCCGAACTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YFPISLQVKTWPCFL*FALRNSRGLDPNFR Trigger: TCTGAAGTTCGGATCCAATCCTCTTGAATTCCTAAGAGCAAAGCAAAGGAAACATGGCCATGTTTTTACCTGCAAACTGATGGGGAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 90 bp | GTGATGAAGTGGACATATTTCCCCATCAGTTTGCAGGTAAAAACATaGCCATGTTTCCTTTGCTTTGCTCTTAGGAATTCAAGAGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: VMKWTYFPISLQVKT*PCFLCFALRNSRGL Trigger: CAATCCTCTTGAATTCCTAAGAGCAAAGCAAAGGAAACATGGCCATGTTTTTACCTGCAAACTGATGGGGAAATATGTCCACTTCATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 90 bp | GGTAGATTTCAGGATCCAAGTGCATTAACTGTGGGTAAAGAGCTATaGTGTCATCTTTTCGAATGTTATAGGAACCATCCTCAAGGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GRFQDPSALTVGKEL*CHLFECYRNHPQGV Trigger: TACACCTTGAGGATGGTTCCTATAACATTCGAAAAGATGACATCATAGCTCTTTACCCACAGTTAATGCACTTGGATCCTGAAATCTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 90 bp | TTTGTTAAAAGTCTTGTTTATGTTTTCCGTGGTATTTCCATCACTTaGGTCTATGCTTCTGTGTCCAAATGCCTTCGCAGAAGTAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FVKSLVYVFRGISIT*VYASVSKCLRRSSV Trigger: TACACTACTTCTGCGAAGGCATTTGGACACAGAAGCATAGACCCAAGTGATGGAAATACCACGGAAAACATAAACAAGACTTTTAACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 90 bp | GCCGGAAATACTTGGTCAAATTGTTTGAAGCTGTCAAGGTTGTTTTaGATAAATGCTCTTTGTGAGTCTGTCTTTGAAATATCTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AGNTWSNCLKLSRLF*INALCESVFEISLP Trigger: TGGCAAAGATATTTCAAAGACAGACTCACAAAGAGCATTTATTCAAAACAACCTTGACAGCTTCAAACAATTTGACCAAGTATTTCCGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 72 bp | CTTCAAGCTCTCAGCCAGCCTTTCCCGGGCTTTATGTaGGGTCTTGAACAAGTGAATAGGGACGCCCGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQALSQPFPGFM*GLEQVNRDARH Trigger: GTGGCGGGCGTCCCTATTCACTTGTTCAAGACCGCACATAAAGCCCGGGAAAGGCTGGCTGAGAGCTTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | GGCATACATCCCTTCCGTGACCCAGACAGCGCTCTTTaGTTTAGGAAGGCCCGGAGGTCTCATGACAGATTG | + |
|
Preference number: 6 (lower is better) Translates to: GIHPFRDPDSAL*FRKARRSHDRL Trigger: CAATCTGTCATGAGACCTCCGGGCCTTCCTAAATCAAAGAGCGCTGTCTGGGTCACGGAAGGGATGTATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | TTTAGTGGTGGCAAAATTCCCAAGCCTGCCCGGGACTaGTCTAGAGGGGGACACTTGGTGTGGCTCTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: FSGGKIPKPARD*SRGGHLVWLST Trigger: TGTAGAGAGCCACACCAAGTGTCCCCCTCTAGATCAGTCCCGGGCAGGCTTGGGAATTTTGCCACCACTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 72 bp | GCTCCAGAAGGTTGCAGGAATGGTGTTTGCTTGAGATaGCCAGAGGATCACGAGGTGCGTCTTAGCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: APEGCRNGVCLR*PEDHEVRLSLL Trigger: GAGAAGGCTAAGACGCACCTCGTGATCCTCTGGGCATCTCAAGCAAACACCATTCCTGCAACCTTCTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 72 bp | AGTTCAGAGACCTGGTCCCTCATGTACAGGTTCTTGTaGTTCAAGCTCTCAGCCAGCCTTTCCCGGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSETWSLMYRFL*FKLSASLSRAL Trigger: TAAAGCCCGGGAAAGGCTGGCTGAGAGCTTGAAGCACAAGAACCTGTACATGAGGGACCAGGTCTCTGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 72 bp | AGTGAAGTCCTCCTTAGCTGTCCGGATATTCAAGGATaGACTGGAGAGCCGCAGAGCCTCCTTGATGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SEVLLSCPDIQG*TGEPQSLLDDA Trigger: AGCATCATCAAGGAGGCTCTGCGGCTCTCCAGTGCATCCTTGAATATCCGGACAGCTAAGGAGGACTTCACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | AATAAGCTCCAGAAGGTTGCAGGAATGGTGTTTGCTTaGGATGCCCAGAGGATCACGAGGTGCGTCTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NKLQKVAGMVFA*DAQRITRCVLA Trigger: GGCTAAGACGCACCTCGTGATCCTCTGGGCATCTCAAGCAAACACCATTCCTGCAACCTTCTGGAGCTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS GCA 72 bp | GGAAGGCCCGGAGGTCTCATGACAGATTGGAGGTTTTaGATCATGGCTTCAGAGAGTGAACACAGAGCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GRPGGLMTDWRF*IMASESEHRAS Trigger: AGATGCTCTGTGTTCACTCTCTGAAGCCATGATGCAAAACCTCCAATCTGTCATGAGACCTCCGGGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | AGGATTGGATCCGAACTTCAGAGCACAGCCCAGGTATaGAATCAACCCGTTGTCCAAAGGAGGTTCACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: RIGSELQSTAQV*NQPVVQRRFTY Trigger: GTAGGTGAACCTCCTTTGGACAACGGGTTGATTCCATACCTGGGCTGTGCTCTGAAGTTCGGATCCAATCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 90 bp | TGCGTCTTAGCCTTCTCCATGTCATCAAAGGTGGAGAGTGTATCGTaGAGAAACATGCGTAGACGGATCAGTTCAGAGACCTGGTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CVLAFSMSSKVESVS*RNMRRRISSETWSL Trigger: GAGGGACCAGGTCTCTGAACTGATCCGTCTACGCATGTTTCTCAACGATACACTCTCCACCTTTGATGACATGGAGAAGGCTAAGACGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | GCTCTTGATCCAAGTAAATGGCATTCCCTCCAGAGCTaGGCTCTTGGCCAGCACTCTGTAATGCTCCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALDPSKWHSLQS*ALGQHSVMLHS Trigger: TGAATGGAGCATTACAGAGTGCTGGCCAAGAGCTCAGCTCTGGAGGGAATGCCATTTACTTGGATCAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | TTGAGAAACATGCGTAGACGGATCAGTTCAGAGACCTaGTCCCTCATGTACAGGTTCTTGTGCTTCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LRNMRRRISSET*SLMYRFLCFKL Trigger: GAGCTTGAAGCACAAGAACCTGTACATGAGGGACCAGGTCTCTGAACTGATCCGTCTACGCATGTTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 72 bp | GCCTTCTCCATGTCATCAAAGGTGGAGAGTGTATCGTaGAGAAACATGCGTAGACGGATCAGTTCAGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: AFSMSSKVESVS*RNMRRRISSET Trigger: GGTCTCTGAACTGATCCGTCTACGCATGTTTCTCAACGATACACTCTCCACCTTTGATGACATGGAGAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 72 bp | TTTGAAATAAGCTCCAGAAGGTTGCAGGAATGGTGTTaGCTTGAGATGCCCAGAGGATCACGAGGTGCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FEISSRRLQEWC*LEMPRGSRGAS Trigger: AGACGCACCTCGTGATCCTCTGGGCATCTCAAGCAAACACCATTCCTGCAACCTTCTGGAGCTTATTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 90 bp | TTGGATCCGAACTTCAGAGCACAGCCCAGGTATGGAATCAACCCGTaGTCCAAAGGAGGTTCACCTACTTTCCTTCTCCTTATTCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LDPNFRAQPRYGINP*SKGGSPTFLLLIPM Trigger: CATTGGAATAAGGAGAAGGAAAGTAGGTGAACCTCCTTTGGACAACGGGTTGATTCCATACCTGGGCTGTGCTCTGAAGTTCGGATCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 90 bp | ACATGGCCATGTTTCCTTTGCTTTGCTCTTAGGAATTCAAGAGGATaGGATCCGAACTTCAGAGCACAGCCCAGGTATGGAATCAACCCG | + |
|
Preference number: 6 (lower is better) Translates to: TWPCFLCFALRNSRG*DPNFRAQPRYGINP Trigger: CGGGTTGATTCCATACCTGGGCTGTGCTCTGAAGTTCGGATCCAATCCTCTTGAATTCCTAAGAGCAAAGCAAAGGAAACATGGCCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | CCTTCTCCATGTCATCAAAGGTGGAGAGTGTATCGTTaGGAAACATGCGTAGACGGATCAGTTCAGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPCHQRWRVYR*ETCVDGSVQRP Trigger: AGGTCTCTGAACTGATCCGTCTACGCATGTTTCTCAACGATACACTCTCCACCTTTGATGACATGGAGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | TTTGATTTAGGAAGGCCCGGAGGTCTCATGACAGATTaGAGGTTTTGCATCATGGCTTCAGAGAGTGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: FDLGRPGGLMTD*RFCIMASESEH Trigger: GTGTTCACTCTCTGAAGCCATGATGCAAAACCTCCAATCTGTCATGAGACCTCCGGGCCTTCCTAAATCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | GACAGATTGGAGGTTTTGCATCATGGCTTCAGAGAGTaGACACAGAGCATCTCCCTGGAGGGTTTTGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: DRLEVLHHGFRE*TQSISLEGFVK Trigger: TTTAACAAAACCCTCCAGGGAGATGCTCTGTGTTCACTCTCTGAAGCCATGATGCAAAACCTCCAATCTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | GAGGCTGCTTTCATTGCTTCAGGGCTCCTGATCATTTaGAATAAGCTCCAGAAGGTTGCAGGAATGGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EAAFIASGLLII*NKLQKVAGMVF Trigger: AAACACCATTCCTGCAACCTTCTGGAGCTTATTTCAAATGATCAGGAGCCCTGAAGCAATGAAAGCAGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | GTTTCCTTTGCTTTGCTCTTAGGAATTCAAGAGGATTaGATCCGAACTTCAGAGCACAGCCCAGGTATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSFALLLGIQED*IRTSEHSPGME Trigger: TTCCATACCTGGGCTGTGCTCTGAAGTTCGGATCCAATCCTCTTGAATTCCTAAGAGCAAAGCAAAGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | AGTCTTGTTTATGTTTTCCGTGGTATTTCCATCACTTaGGTCTATGCTTCTGTGTCCAAATGCCTTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVYVFRGISIT*VYASVSKCLRR Trigger: TCTGCGAAGGCATTTGGACACAGAAGCATAGACCCAAGTGATGGAAATACCACGGAAAACATAAACAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 72 bp | AAGTCTTGTTTATGTTTTCCGTGGTATTTCCATCACTaGGGTCTATGCTTCTGTGTCCAAATGCCTTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KSCLCFPWYFHH*GLCFCVQMPSQ Trigger: CTGCGAAGGCATTTGGACACAGAAGCATAGACCCAAGTGATGGAAATACCACGGAAAACATAAACAAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 90 bp | TATGACAGGGAGTTTGTGATGAAGTGGACATATTTCCCCATCAGTTaGCAGGTAAAAACATGGCCATGTTTCCTTTGCTTTGCTCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: YDREFVMKWTYFPIS*QVKTWPCFLCFALR Trigger: CCTAAGAGCAAAGCAAAGGAAACATGGCCATGTTTTTACCTGCAAACTGATGGGGAAATATGTCCACTTCATCACAAACTCCCTGTCATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS TCA 72 bp | CAGGATCCAAGTGCATTAACTGTGGGTAAAGAGCTATaGTGTCATCTTTTCGAATGTTATAGGAACCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: QDPSALTVGKEL*CHLFECYRNHP Trigger: AGGATGGTTCCTATAACATTCGAAAAGATGACATCATAGCTCTTTACCCACAGTTAATGCACTTGGATCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | TGGACATATTTCCCCATCAGTTTGCAGGTAAAAACATaGCCATGTTTCCTTTGCTTTGCTCTTAGGAATTCA | + |
|
Preference number: 6 (lower is better) Translates to: WTYFPISLQVKT*PCFLCFALRNS Trigger: TGAATTCCTAAGAGCAAAGCAAAGGAAACATGGCCATGTTTTTACCTGCAAACTGATGGGGAAATATGTCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CCA 72 bp | AAGACTTTGTGGTATGACAGGGAGTTTGTGATGAAGTaGACATATTTCCCCATCAGTTTGCAGGTAAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: KTLWYDREFVMK*TYFPISLQVKT Trigger: TGTTTTTACCTGCAAACTGATGGGGAAATATGTCCACTTCATCACAAACTCCCTGTCATACCACAAAGTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 72 bp | GAGTTTGTGATGAAGTGGACATATTTCCCCATCAGTTaGCAGGTAAAAACATGGCCATGTTTCCTTTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EFVMKWTYFPIS*QVKTWPCFLCF Trigger: AAAGCAAAGGAAACATGGCCATGTTTTTACCTGCAAACTGATGGGGAAATATGTCCACTTCATCACAAACTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||
| CDS CAA 72 bp | ATAAATGCTCTTTGTGAGTCTGTCTTTGAAATATCTTaGCCAAACAGCGTTAGATATCCGGCTTCAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: INALCESVFEIS*PNSVRYPASNI Trigger: GATGTTTGAAGCCGGATATCTAACGCTGTTTGGCAAAGATATTTCAAAGACAGACTCACAAAGAGCATTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029905.2 |
||