Pregenerated sensors for CYP51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001467Ensembl transcript IDs: ENSMUST00000001507.5
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCAACCCAGTACAGCACGAGAGCTTCTCAGAGGCTTCATTCTTTaGCAGCTGCGGCTTGCGGTCCTCTCTCCACACTGGCTTCTTGTT | + |
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Preference number: 1 (lower is better) Translates to: LQPSTARELLRGFIL*QLRLAVLSPHWLLV Trigger: AACAAGAAGCCAGTGTGGAGAGAGGACCGCAAGCCGCAGCTGGCAAAGAATGAAGCCTCTGAGAAGCTCTCGTGCTGTACTGGGTTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CCA 90 bp | TCAGCCTTTCATAGGATCACTAGCGTAGGGATGGAACCACCACAGTaGGCTGGAGCCTCTCCCATTGATCACTTATTAAGAAAATGCCTT | + |
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Preference number: 1 (lower is better) Translates to: SAFHRITSVGMEPPQ*AGASPIDHLLRKCL Trigger: AAGGCATTTTCTTAATAAGTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCTAGTGATCCTATGAAAGGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR TCA 90 bp | AAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACTaGGGCTTCCTTTTCTCTCTGATGACCCTAGCTTGTGTCAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: KKMPYSWISWRHFLN*GFLFSLMTLACVKC Trigger: GCACTTGACACAAGCTAGGGTCATCAGAGAGAAAAGGAAGCCTCAGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGGCATTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 90 bp | TCTTCAACCCAGTACAGCACGAGAGCTTCTCAGAGGCTTCATTCTTaGCCAGCTGCGGCTTGCGGTCCTCTCTCCACACTGGCTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: SSTQYSTRASQRLHS*PAAACGPLSTLASC Trigger: ACAAGAAGCCAGTGTGGAGAGAGGACCGCAAGCCGCAGCTGGCAAAGAATGAAGCCTCTGAGAAGCTCTCGTGCTGTACTGGGTTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR GCA 90 bp | AACTGTAACGGAGTTTCAGTTCCTCTTGCTACAAGGAAACACCATGACCAAAAATTGCCAGCTGCGGCTTaGGGTCCTCTCTCCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: NCNGVSVPLATRKHHDQKLPAAA*GPLSTL Trigger: CAGTGTGGAGAGAGGACCGCAAGCCGCAGCTGGCAA...TTTTTGGTCATGGTGTTTCCTTGTAGCAAGAGGAACTGAAACTCCGTTACAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR CCA 90 bp | AACTGTAACGGAGTTTCAGTTCCTCTTGCTACAAGGAAACACCATGACCAAAAAATGGAACCACCACAGTaGGCTGGAGCCTCTCCCATT | + |
|
Preference number: 2 (lower is better) Translates to: NCNGVSVPLATRKHHDQKMEPPQ*AGASPI Trigger: AATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCAT...TTTTTGGTCATGGTGTTTCCTTGTAGCAAGAGGAACTGAAACTCCGTTACAGTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 90 bp | GCCCAACTACACGACCCCATTACCTTTGTAGCATTTGACAAGGCTTaGAAACTTCAAACACCAGTTCCAAATCTCCCTGTGGCAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AQLHDPITFVAFDKA*KLQTPVPNLPVAMC Trigger: ACACATTGCCACAGGGAGATTTGGAACTGGTGTTTGAAGTTTCAAAGCCTTGTCAAATGCTACAAAGGTAATGGGGTCGTGTAGTTGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR TCA 90 bp | AACTGTAACGGAGTTTCAGTTCCTCTTGCTACAAGGAAACACCATGACCAAAAATCCTGCCGCAGGTCCTaGATAACAGCATTACAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NCNGVSVPLATRKHHDQKSCRRS*ITALQV Trigger: CACCTGTAATGCTGTTATTCAGGACCTGCGGCAGGA...TTTTTGGTCATGGTGTTTCCTTGTAGCAAGAGGAACTGAAACTCCGTTACAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGATCGCTGCCATCTTCCAGGAGCGGTGCTCCAGTTAACATTTCAAAGGACATTCCAAATCTCCCTGTaGCAATGTGTGGAGTTAATT | + |
|
Preference number: 2 (lower is better) Translates to: QDRCHLPGAVLQLTFQRTFQISL*QCVELI Trigger: AATTAACTCCACACATTGCCACAGGGAGATTTGGAA...TGTCCTTTGAAATGTTAACTGGAGCACCGCTCCTGGAAGATGGCAGCGATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR TCA 90 bp | ACAGCATTACAGGTGTGCAGCACCACTCCAGCAACAGAGCTATTCTTACTCCTATACCTTTGTAGCATTTaGCAAGGCTTTGAAACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: TALQVCSTTPATELFLLLYLCSI*QGFETS Trigger: TGAAGTTTCAAAGCCTTGTCAAATGCTACAAAGGTA...TAGGAGTAAGAATAGCTCTGTTGCTGGAGTGGTGCTGCACACCTGTAATGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAACACCATGACCAAAAAGCAAATCCCGAGGGTGAAGGTGGGTTATTTGATTAAAATCATAAACTaGCTCTCAGAACCACACTCT | + |
|
Preference number: 2 (lower is better) Translates to: QGNTMTKKQIPRVKVGYLIKIIN*LSEPHS Trigger: AGAGTGTGGTTCTGAGAGCCAGTTTATGATTTTAAT...CAAATAACCCACCTTCACCCTCGGGATTTGCTTTTTGGTCATGGTGTTTCCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAGGTGGGTTATTTGGCTTACACTTCCATATCACTGTTTATCATCAAGTGTTTTTCACAAAACTGTaGCCATTTGGGACCAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GEGGLFGLHFHITVYHQVFFTKL*PFGTSN Trigger: GTTACTGGTCCCAAATGGTCACAGTTTTGTGAAAAA...CACTTGATGATAAACAGTGATATGGAAGTGTAAGCCAAATAACCCACCTTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR GCA 72 bp | GCTTCTCAGAGGCTTCATTCTTTGCCAGCTGCGGCTTaGGGTCCTCTCTCCACACTGGCTTCTTGTTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASQRLHSLPAAA*GPLSTLASCSS Trigger: AGAGGAACAAGAAGCCAGTGTGGAGAGAGGACCGCAAGCCGCAGCTGGCAAAGAATGAAGCCTCTGAGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR GCA 72 bp | GAGGCAGGAGCTGATGCAGAGGCCATAAATGAGTGCTaGTTACTGTTTTGCTCCTCATGTCACGGTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAGADAEAINEC*LLFCSSCHGQP Trigger: AGGCTGACCGTGACATGAGGAGCAAAACAGTAAGCAGCACTCATTTATGGCCTCTGCATCAGCTCCTGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR GCA 72 bp | CTGGAGGCAGGAGCTGATGCAGAGGCCATAAATGAGTaGTGCTTACTGTTTTGCTCCTCATGTCACGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LEAGADAEAINE*CLLFCSSCHGQ Trigger: CTGACCGTGACATGAGGAGCAAAACAGTAAGCAGCACTCATTTATGGCCTCTGCATCAGCTCCTGCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR TCA 72 bp | AGGTTGGCCTCAAATTCTCAATCCTGCCGCAGGTCCTaGATAACAGCATTACAGGTGTGCAGCACCACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLASNSQSCRRS*ITALQVCSTTP Trigger: TGGAGTGGTGCTGCACACCTGTAATGCTGTTATTCAGGACCTGCGGCAGGATTGAGAATTTGAGGCCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR CAA 90 bp | ACTAGCGTAGGGATGGAACCACCACAGTGGGCTGGAGCCTCTCCCATTGATCACTTACAATCTGTTAGGTaGTCTCCTGAGCACAGAATA | + |
|
Preference number: 3 (lower is better) Translates to: TSVGMEPPQWAGASPIDHLQSVR*SPEHRI Trigger: TATTCTGTGCTCAGGAGACAACCTAACAGATTGTAA...GTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CCA 72 bp | CATAGGATCACTAGCGTAGGGATGGAACCACCACAGTaGGCTGGAGCCTCTCCCATTGATCACTTATTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HRITSVGMEPPQ*AGASPIDHLLR Trigger: TCTTAATAAGTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCTAGTGATCCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR TCA 72 bp | CCTTACAGCTGGATCTCATGGAGGCATTTCCTCAACTaGGGCTTCCTTTTCTCTCTGATGACCCTAGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PYSWISWRHFLN*GFLFSLMTLAC Trigger: ACAAGCTAGGGTCATCAGAGAGAAAAGGAAGCCTCAGTTGAGGAAATGCCTCCATGAGATCCAGCTGTAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGTTAATTACCTGGATGCTGCATTCTATATCTTCTTAATTCCAAGACACACCCAGAGGCTTCATTCTTaGCCAGCTGCGGCTTGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: GVNYLDAAFYIFLIPRHTQRLHS*PAAACG Trigger: ACCGCAAGCCGCAGCTGGCAAAGAATGAAGCCTCTG...GGTGTGTCTTGGAATTAAGAAGATATAGAATGCAGCATCCAGGTAATTAACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR GCA 72 bp | GATGCAGAGGCCATAAATGAGTGCTGCTTACTGTTTTaGTCCTCATGTCACGGTCAGCCTTTCATAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: DAEAINECCLLF*SSCHGQPFIGS Trigger: TGATCCTATGAAAGGCTGACCGTGACATGAGGAGCAAAACAGTAAGCAGCACTCATTTATGGCCTCTGCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR TCA 72 bp | TTGGCTTACACTTCCATATCACTGTTTATCATCAAGTaGGGACAGGAACTCAAGCAGGTCAGGAACCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LAYTSISLFIIK*GQELKQVRNLE Trigger: CTCCAGGTTCCTGACCTGCTTGAGTTCCTGTCCTCACTTGATGATAAACAGTGATATGGAAGTGTAAGCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR TCA 72 bp | GGCCCAACTACACGACCCCATTACCTTTGTAGCATTTaGCAAGGCTTTGAAACTTCAAACACCAGTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPTTRPHYLCSI*QGFETSNTSSK Trigger: TTTGGAACTGGTGTTTGAAGTTTCAAAGCCTTGTCAAATGCTACAAAGGTAATGGGGTCGTGTAGTTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR GCA 72 bp | TTCCTTTTCTCTCTGATGACCCTAGCTTGTGTCAAGTaGCTAAGACCAGCCAGTACACATACTTTTAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: FLFSLMTLACVK*LRPASTHTFRE Trigger: TTCTCTAAAAGTATGTGTACTGGCTGGTCTTAGGCACTTGACACAAGCTAGGGTCATCAGAGAGAAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTTCGCAGTAAACTTAACCTTTATCCTTTCATATCTTTACGCACAGAAGGCATTTGACAAGGCTTaGAAACTTCAAACACCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSFAVNLTFILSYLYAQKAFDKA*KLQTPV Trigger: AACTGGTGTTTGAAGTTTCAAAGCCTTGTCAAATGC...CTTCTGTGCGTAAAGATATGAAAGGATAAAGGTTAAGTTTACTGCGAAGCTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR TCA 72 bp | CAAATAGGATGTAAGCTTCCATATGCCCAGATTTCATaGACTGTACTTACTGAAGCACAAGTTCAAATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QIGCKLPYAQIS*TVLTEAQVQIH Trigger: ATGAATTTGAACTTGTGCTTCAGTAAGTACAGTTCATGAAATCTGGGCATATGGAAGCTTACATCCTATTTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR TCA 90 bp | ACTAGCGTAGGGATGGAACCACCACAGTGGGCTGGAGCCTCTCCCATTGATCACGAGCACCCAGCCGCCTaGCTGCAGCAAGCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TSVGMEPPQWAGASPIDHEHPAA*LQQAQK Trigger: CTTCTGGGCTTGCTGCAGTCAGGCGGCTGGGTGCTC...GTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCTAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 72 bp | CAGTACAGCACGAGAGCTTCTCAGAGGCTTCATTCTTaGCCAGCTGCGGCTTGCGGTCCTCTCTCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: QYSTRASQRLHS*PAAACGPLSTL Trigger: CAGTGTGGAGAGAGGACCGCAAGCCGCAGCTGGCAAAGAATGAAGCCTCTGAGAAGCTCTCGTGCTGTACTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR TCA 90 bp | CTGCCATCTTCCAGGAGCGGTGCTCCAGTTAACATTTCAAAGGACACACCACACCTCTATCCCTGCGCCTaGAACTTGGCAGAGGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPSSRSGAPVNISKDTPHLYPCA*NLAEAA Trigger: GGCTGCCTCTGCCAAGTTTCAGGCGCAGGGATAGAG...GTGTGGTGTGTCCTTTGAAATGTTAACTGGAGCACCGCTCCTGGAAGATGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CCA 90 bp | CTGCCATCTTCCAGGAGCGGTGCTCCAGTTAACATTTCAAAGGACACACCACACTCCAGGCACTGGTGGTaGAGGATGTGTGCTGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPSSRSGAPVNISKDTPHSRHWW*RMCAVQ Trigger: CTGGACAGCACACATCCTCCACCACCAGTGCCTGGA...GTGTGGTGTGTCCTTTGAAATGTTAACTGGAGCACCGCTCCTGGAAGATGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR GCA 90 bp | AGCGTAGGGATGGAACCACCACAGTGGGCTGGAGCCTCTCCCATTGATCACTTAGTTCTTTTGACAGCCTaGGCTTCTGGATGGCCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SVGMEPPQWAGASPIDHLVLLTA*ASGWPY Trigger: ATAAGGCCATCCAGAAGCGCAGGCTGTCAAAAGAAC...TAAGTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR GCA 90 bp | ACAGCATTACAGGTGTGCAGCACCACTCCAGCAACAGAGCTATTCTTACTCCTAGCGTGGAAAGCAAGTTaGCTCCTGTCACCTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TALQVCSTTPATELFLLLAWKAS*LLSPAP Trigger: TGGAGCAGGTGACAGGAGGCAACTTGCTTTCCACGC...TAGGAGTAAGAATAGCTCTGTTGCTGGAGTGGTGCTGCACACCTGTAATGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR GCA 90 bp | ACTAGCGTAGGGATGGAACCACCACAGTGGGCTGGAGCCTCTCCCATTGATCACCTGTTCCAAGAAAATTaGATTTGGCACATCATATGC | + |
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Preference number: 4 (lower is better) Translates to: TSVGMEPPQWAGASPIDHLFQEN*IWHIIC Trigger: GCATATGATGTGCCAAATGCAATTTTCTTGGAACAG...GTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 72 bp | CAACTGAGGCTTCCTTTTCTCTCTGATGACCCTAGCTaGTGTCAAGTGCCTAAGACCAGCCAGTACACATAC | + |
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Preference number: 4 (lower is better) Translates to: QLRLPFLSDDPS*CQVPKTSQYTY Trigger: GTATGTGTACTGGCTGGTCTTAGGCACTTGACACAAGCTAGGGTCATCAGAGAGAAAAGGAAGCCTCAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR GCA 90 bp | AACTGTAACGGAGTTTCAGTTCCTCTTGCTACAAGGAAACACCATGACCAAAAAGTGGTGGAGGATGTGTaGTGTCCAGCCAGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: NCNGVSVPLATRKHHDQKVVEDV*CPASSS Trigger: ACTGCTGCTGGCTGGACAGCACACATCCTCCACCAC...TTTTTGGTCATGGTGTTTCCTTGTAGCAAGAGGAACTGAAACTCCGTTACAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CCA 90 bp | GGAGTTAATTACCTGGATGCTGCATTCTATATCTTCTTAATTCCAAGACACACCCCTGCGCCTGAAACTTaGCAGAGGCAGCCAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GVNYLDAAFYIFLIPRHTPAPET*QRQPSW Trigger: CCAGCTTGGCTGCCTCTGCCAAGTTTCAGGCGCAGG...GGTGTGTCTTGGAATTAAGAAGATATAGAATGCAGCATCCAGGTAATTAACTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR TCA 90 bp | GGTGAAGGTGGGTTATTTGGCTTACACTTCCATATCACTGTTTATCATCAAGTGCCAGCAGCAGTCCGATaGGCATCCCTGATATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GEGGLFGLHFHITVYHQVPAAVR*ASLISP Trigger: AGGAGATATCAGGGATGCTCATCGGACTGCTGCTGG...CACTTGATGATAAACAGTGATATGGAAGTGTAAGCCAAATAACCCACCTTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR TCA 90 bp | AACTGTAACGGAGTTTCAGTTCCTCTTGCTACAAGGAAACACCATGACCAAAAATCTCCAACACAACGATaGCGCCCAGCTCCAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: NCNGVSVPLATRKHHDQKSPTQR*RPAPNG Trigger: GCCATTTGGAGCTGGGCGTCATCGTTGTGTTGGAGA...TTTTTGGTCATGGTGTTTCCTTGTAGCAAGAGGAACTGAAACTCCGTTACAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR GCA 90 bp | GGAGTTAATTACCTGGATGCTGCATTCTATATCTTCTTAATTCCAAGACACACCACCTCCATCCAGGTCTaGGTACAGCTGAGCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: GVNYLDAAFYIFLIPRHTTSIQV*VQLSHL Trigger: AAGGTGGCTCAGCTGTACGCAGACCTGGATGGAGGT...GGTGTGTCTTGGAATTAAGAAGATATAGAATGCAGCATCCAGGTAATTAACTCC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CCA 90 bp | TCAAGCTTCGCAGTAAACTTAACCTTTATCCTTTCATATCTTTACGCACAGAAGCCATCCAGGCACTGGTaGTGGAGGATGTGTGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: SSFAVNLTFILSYLYAQKPSRHW*WRMCAV Trigger: GACAGCACACATCCTCCACCACCAGTGCCTGGATGG...CTTCTGTGCGTAAAGATATGAAAGGATAAAGGTTAAGTTTACTGCGAAGCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR TCA 90 bp | CAAGGAAACACCATGACCAAAAAGCAAATCCCGAGGGTGAAGGTGGGTTATTTGGAGTCTTTCAGTCTTTaGTTGACAGTAGGAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: QGNTMTKKQIPRVKVGYLESFSL*LTVGET Trigger: TGTCTCTCCTACTGTCAATCAAAGACTGAAAGACTC...CAAATAACCCACCTTCACCCTCGGGATTTGCTTTTTGGTCATGGTGTTTCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 72 bp | CACGACCCCATTACCTTTGTAGCATTTGACAAGGCTTaGAAACTTCAAACACCAGTTCCAAATCTCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HDPITFVAFDKA*KLQTPVPNLPV Trigger: CACAGGGAGATTTGGAACTGGTGTTTGAAGTTTCAAAGCCTTGTCAAATGCTACAAAGGTAATGGGGTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CCA 90 bp | GGAGTTAATTACCTGGATGCTGCATTCTATATCTTCTTAATTCCAAGACACACCAGAGTAAATATGTGGTaGACTTTTCGCTCCAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GVNYLDAAFYIFLIPRHTRVNMW*TFRSSG Trigger: CCCGCTGGAGCGAAAAGTCCACCACATATTTACTCT...GGTGTGTCTTGGAATTAAGAAGATATAGAATGCAGCATCCAGGTAATTAACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 72 bp | ACCAAAAAGCAAATCCCGAGGGTGAAGGTGGGTTATTaGGCTTACACTTCCATATCACTGTTTATCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: TKKQIPRVKVGY*AYTSISLFIIK Trigger: CTTGATGATAAACAGTGATATGGAAGTGTAAGCCAAATAACCCACCTTCACCCTCGGGATTTGCTTTTTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| 3UTR CAA 72 bp | AAGCCTCTTAAAACTGTAACGGAGTTTCAGTTCCTCTaGCTACAAGGAAACACCATGACCAAAAAGCAAATC | + |
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Preference number: 4 (lower is better) Translates to: KPLKTVTEFQFL*LQGNTMTKKQI Trigger: GATTTGCTTTTTGGTCATGGTGTTTCCTTGTAGCAAGAGGAACTGAAACTCCGTTACAGTTTTAAGAGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CCA 90 bp | GGAGTTAATTACCTGGATGCTGCATTCTATATCTTCTTAATTCCAAGACACACCTGCATGGCCAAGGAATaGAATTGGAGAGTAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: GVNYLDAAFYIFLIPRHTCMAKE*NWRVNM Trigger: CATATTTACTCTCCAATTCCATTCCTTGGCCATGCA...GGTGTGTCTTGGAATTAAGAAGATATAGAATGCAGCATCCAGGTAATTAACTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CCA 90 bp | AAGCTTCGCAGTAAACTTAACCTTTATCCTTTCATATCTTTACGCACAGAAGTGTTTGTAACGGATTACTaGGTTTTCTGGGGTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: KLRSKLNLYPFISLRTEVFVTDY*VFWGVD Trigger: ATCCACACCCCAGAAAACCCAGTAATCCGTTACAAA...CACTTCTGTGCGTAAAGATATGAAAGGATAAAGGTTAAGTTTACTGCGAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS TCA 90 bp | CACTGGTGGTGGAGGATGTGTGCTGTCCAGCCAGCAGCAGTCCGATaGGCATCCCTGATATCTCCTCATCTGTTAGAGGACGCCCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: HWWWRMCAVQPAAVR*ASLISPHLLEDARP Trigger: AGGACGGGCGTCCTCTAACAGATGAGGAGATATCAGGGATGCTCATCGGACTGCTGCTGGCTGGACAGCACACATCCTCCACCACCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CAA 90 bp | AGCGTAGGGATGGAACCACCACAGTGGGCTGGAGCCTCTCCCATTGATCACTTAGGAGTCTTTCAGTCTTaGATTGACAGTAGGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: SVGMEPPQWAGASPIDHLGVFQS*IDSRRD Trigger: GTCTCTCCTACTGTCAATCAAAGACTGAAAGACTCC...TAAGTGATCAATGGGAGAGGCTCCAGCCCACTGTGGTGGTTCCATCCCTACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CAA 90 bp | CGCACAGAAGTGGCCCAACTACACGACCCCATTACCTTTGTAGCATTTGACAAGTCTTCGTTTTTACTATaGAAGAGCAGCGCAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RTEVAQLHDPITFVAFDKSSFLL*KSSAAA Trigger: TGCAGCTGCGCTGCTCTTCAATAGTAAAAACGAAGA...CTTGTCAAATGCTACAAAGGTAATGGGGTCGTGTAGTTGGGCCACTTCTGTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS-3UTR CAA 90 bp | CAAGGAAACACCATGACCAAAAAGCAAATCCCGAGGGTGAAGGTGGGTTATTTGTCTGTTCCAAGAAAATaGCATTTGGCACATCATATG | + |
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Preference number: 5 (lower is better) Translates to: QGNTMTKKQIPRVKVGYLSVPRK*HLAHHM Trigger: CATATGATGTGCCAAATGCAATTTTCTTGGAACAGA...CAAATAACCCACCTTCACCCTCGGGATTTGCTTTTTGGTCATGGTGTTTCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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| CDS TCA 72 bp | TGGAGGATGTGTGCTGTCCAGCCAGCAGCAGTCCGATaGGCATCCCTGATATCTCCTCATCTGTTAGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: WRMCAVQPAAVR*ASLISPHLLED Trigger: GTCCTCTAACAGATGAGGAGATATCAGGGATGCTCATCGGACTGCTGCTGGCTGGACAGCACACATCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001507.5 |
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