Pregenerated sensors for CYP4X1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047155Ensembl transcript IDs: ENSMUST00000051400.8, ENSMUST00000106545.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTCTTGTGAGACTATGCTGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCCCCGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: VSCETMLGPSKHRSG*SQSAIGWITGPPME Trigger: CTCCATCGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGTCTCACAAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 90 bp | GGGGAAGGAAGATGGTTAATAGGACAAGGAGGACATGGACCTAGTTaGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCA | + |
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Preference number: 1 (lower is better) Translates to: GEGRWLIGQGGHGPS*MDLEGIILSEVTPP Trigger: TGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGGTCCATGTCCTCCTTGTCCTATTAACCATCTTCCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 90 bp | CCCATGCCCTTTCACCAGGCAGCTTCCAGAAGAACACCATGTGTCTaGTTCAGCAAAACATCCTCCCATGTGTCTTCTTCAGCAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: PMPFHQAASRRTPCV*FSKTSSHVSSSAKQ Trigger: TTGTTTTGCTGAAGAAGACACATGGGAGGATGTTTTGCTGAAGCAGACACATGGTGTTCTTCTGGAAGCTGCCTGGTGAAAGGGCATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 90 bp | AGCTTCCAAACGCTGACACCATTGCACACAGTAGCAAGATTTTGCTaGAAGGACCCTGATATAGCTGTCTCTTGTGAGACTATGCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SFQTLTPLHTVARFC*KDPDIAVSCETMLG Trigger: CCCCAGCATAGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTACTGTGTGCAATGGTGTCAGCGTTTGGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 90 bp | CAAAACACCCATGGAAAGGAGTTACAGAGACAATGTTTGGAGCTGTaGCGAAAGGATGGACCATCTAGAGACTGCCATATCTGGGGATCC | + |
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Preference number: 1 (lower is better) Translates to: QNTHGKELQRQCLEL*RKDGPSRDCHIWGS Trigger: GGATCCCCAGATATGGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCTTTCCATGGGTGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 90 bp | AACATCATGTATCCTCTTAAGCATCACTTTCAGCGAAACACCCCATaGCCTTTCACCAGGCAGCTTCCAGAAGAACACCATGTGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: NIMYPLKHHFQRNTP*PFTRQLPEEHHVSA Trigger: AGCAGACACATGGTGTTCTTCTGGAAGCTGCCTGGTGAAAGGGCATGGGGTGTTTCGCTGAAAGTGATGCTTAAGAGGATACATGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 90 bp | ACACCAAACATGAACAAGCAGCAGCTTGATCCAGAAGAAACTGAATaGAGTCCCCTGAAGCAGCAAGAAGCAGCTGGAACACCTCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: TPNMNKQQLDPEETE*SPLKQQEAAGTPLE Trigger: TTCAAGAGGTGTTCCAGCTGCTTCTTGCTGCTTCAGGGGACTCCATTCAGTTTCTTCTGGATCAAGCTGCTGCTTGTTCATGTTTGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 90 bp | GAACACCTCTTGAAGCTCTTGGCTGAGTTTCTCTCTACGGAGTCCTaGCAAATAAAGATCAGTGAGGAAAGCAAGGTGAACCAATGCCAG | + |
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Preference number: 1 (lower is better) Translates to: EHLLKLLAEFLSTES*QIKISEESKVNQCQ Trigger: CTGGCATTGGTTCACCTTGCTTTCCTCACTGATCTTTATTTGTCAGGACTCCGTAGAGAGAAACTCAGCCAAGAGCTTCAAGAGGTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 90 bp | TTAGAGAAAGCAGTAGACTCTGTCAGGGCAGTAGCCCTGGTGAGGTaGGATTTTATGAACACCTCCTATTGCTGGAAATGTTTTTCATCC | + |
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Preference number: 1 (lower is better) Translates to: LEKAVDSVRAVALVR*DFMNTSYCWKCFSS Trigger: GGATGAAAAACATTTCCAGCAATAGGAGGTGTTCATAAAATCCCACCTCACCAGGGCTACTGCCCTGACAGAGTCTACTGCTTTCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 90 bp | ATTGGGAACAAAACACCCATGGAAAGGAGTTACAGAGACAATGTTTaGAGCTGTGACGAAAGGATGGACCATCTAGAGACTGCCATATCT | + |
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Preference number: 1 (lower is better) Translates to: IGNKTPMERSYRDNV*SCDERMDHLETAIS Trigger: AGATATGGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCTTTCCATGGGTGTTTTGTTCCCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 90 bp | AGACAGCTTCCAGAAGAACATCACATGGCACAACTGAGTCTCCAGTaGACTCAGAAATTCCCACTTCAGATAAGATTGGTAATAACCATT | + |
|
Preference number: 1 (lower is better) Translates to: RQLPEEHHMAQLSLQ*TQKFPLQIRLVITI Trigger: AATGGTTATTACCAATCTTATCTGAAGTGGGAATTTCTGAGTTCACTGGAGACTCAGTTGTGCCATGTGATGTTCTTCTGGAAGCTGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 90 bp | CAAATAAAGATCAGTGAGGAAAGCAAGGTGAACCAATGCCAGAGTTaGTCACTGTCTGTTGGGTTATACGTACACTCTTTTCAAACATCA | + |
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Preference number: 1 (lower is better) Translates to: QIKISEESKVNQCQS*SLSVGLYVHSFQTS Trigger: TGATGTTTGAAAAGAGTGTACGTATAACCCAACAGACAGTGAGCAACTCTGGCATTGGTTCACCTTGCTTTCCTCACTGATCTTTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 90 bp | AGGGCAGTAGCCCTGGTGAGGTGGGATTTTATGAACACCTCCTATTaGTGGAAATGTTTTTCATCCAATACAAATCCTGTTATTTGTATA | + |
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Preference number: 1 (lower is better) Translates to: RAVALVRWDFMNTSY*WKCFSSNTNPVICI Trigger: TATACAAATAACAGGATTTGTATTGGATGAAAAACATTTCCAGCAATAGGAGGTGTTCATAAAATCCCACCTCACCAGGGCTACTGCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAGCCAAAAAGTGGGAGTaGGTGGTAGGGTATGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PSWMDLEGIILSEVTPPQAKKWE*VVGYGG Trigger: TCCCCCATACCCTACCACCCACTCCCACTTTTTGGC...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR GCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGCAAGGTGAACCAATaGCAGAGTTGCTCACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PSWMDLEGIILSEVTPPQSKVNQ*QSCSLS Trigger: AGACAGTGAGCAACTCTGGCATTGGTTCACCTTGCT...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR TCA 90 bp | TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGAACCTCTCTACGGAGTCCTaGCAAATAAAGATCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: WMDLEGIILSEVTPPQRNLSTES*QIKISE Trigger: CTCACTGATCTTTATTTGTCAGGACTCCGTAGAGAG...GTTCCTTTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR GCA 90 bp | TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGAACAACCAATGCCAGAGTTaGTCACTGTCTGTTGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: WMDLEGIILSEVTPPQRNNQCQS*SLSVGL Trigger: TAACCCAACAGACAGTGAGCAACTCTGGCATTGGTT...GTTCCTTTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR TCA 90 bp | AAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCATGTGTCTTCTTCATCACATGGCACAACTaGGTCTCCAGTGAACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: KHPLMCLLQQNNLSCVFFITWHN*VSSELR Trigger: TCTGAGTTCACTGGAGACTCAGTTGTGCCATGTGAT...GAAGAAGACACATGAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAATTTTATATGCCCCAGTAACAAATAAAGATCAGTaGGGAAAGCAAGGTGAACCA | + |
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Preference number: 2 (lower is better) Translates to: AITGKRGPLDLQILYAPVTNKDQ*GKQGEP Trigger: TGGTTCACCTTGCTTTCCTCACTGATCTTTATTTGT...TACTGGGGCATATAAAATTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR TCA 90 bp | AAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCATGTGTCTTCTTCCAACTGAGTCTCCAGTaGACTCAGAAATTCCCACTT | + |
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Preference number: 2 (lower is better) Translates to: KHPLMCLLQQNNLSCVFFQLSLQ*TQKFPL Trigger: AAGTGGGAATTTCTGAGTTCACTGGAGACTCAGTTG...GAAGAAGACACATGAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CAA 90 bp | CAGGGCAGTAGCCCTGGTGAGGTGGGATTTTATGAACACCTCCTATaGCTGGAAATGTTTTTCATCCAATACAAATCCTGTTATTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: QGSSPGEVGFYEHLL*LEMFFIQYKSCYLY Trigger: ATACAAATAACAGGATTTGTATTGGATGAAAAACATTTCCAGCAATAGGAGGTGTTCATAAAATCCCACCTCACCAGGGCTACTGCCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | GAGACTATGCTGGGGCCTAGCAAACACAGAAGTGGATaGTCACAGTCAGCTATTGGATGGATCACAGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: ETMLGPSKHRSG*SQSAIGWITGP Trigger: GGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 72 bp | TCCCCTGAAGCAGCAAGAAGCAGCTGGAACACCTCTTaGAGCTCTTGGCTGAGTTTCTCTCTACGGAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SPEAARSSWNTS*SSWLSFSLRSP Trigger: AGGACTCCGTAGAGAGAAACTCAGCCAAGAGCTTCAAGAGGTGTTCCAGCTGCTTCTTGCTGCTTCAGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | GATCTCATTTCGGGTGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTCGGAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DLISGGCEPPCG*WDLNSGPSEEQ Trigger: CTGCTCTTCCGAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCACCCGAAATGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR CAA 90 bp | TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGAACAGTACCCCTGAGCTCTaGACTCTAGCTGCATATGTA | + |
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Preference number: 3 (lower is better) Translates to: WMDLEGIILSEVTPPQRNSTPEL*TLAAYV Trigger: TACATATGCAGCTAGAGTCAAGAGCTCAGGGGTACT...GTTCCTTTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 72 bp | AGATGGTTAATAGGACAAGGAGGACATGGACCTAGTTaGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: RWLIGQGGHGPS*MDLEGIILSEV Trigger: TACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGGTCCATGTCCTCCTTGTCCTATTAACCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 72 bp | GCAGTAGACTCTGTCAGGGCAGTAGCCCTGGTGAGGTaGGATTTTATGAACACCTCCTATTGCTGGAAATGT | + |
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Preference number: 3 (lower is better) Translates to: AVDSVRAVALVR*DFMNTSYCWKC Trigger: ACATTTCCAGCAATAGGAGGTGTTCATAAAATCCCACCTCACCAGGGCTACTGCCCTGACAGAGTCTACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | TATCCTCTTAAGCATCACTTTCAGCGAAACACCCCATaGCCTTTCACCAGGCAGCTTCCAGAAGAACACCAT | + |
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Preference number: 3 (lower is better) Translates to: YPLKHHFQRNTP*PFTRQLPEEHH Trigger: ATGGTGTTCTTCTGGAAGCTGCCTGGTGAAAGGGCATGGGGTGTTTCGCTGAAAGTGATGCTTAAGAGGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 72 bp | GACTCTAGCTGCATATGTATCAGAAGATGGCTTAGTTaGCCATCACTGGAAAGAGAGGCCCATTGGACTTGC | + |
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Preference number: 3 (lower is better) Translates to: DSSCICIRRWLS*PSLEREAHWTC Trigger: GCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCAACTAAGCCATCTTCTGATACATATGCAGCTAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 72 bp | CTTTATACCCCACAGACCAAAGGTGGGGAAGGAAGATaGTTAATAGGACAAGGAGGACATGGACCTAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LYTPQTKGGEGR*LIGQGGHGPSW Trigger: CCAACTAGGTCCATGTCCTCCTTGTCCTATTAACCATCTTCCTTCCCCACCTTTGGTCTGTGGGGTATAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | TTTCACCAGGCAGCTTCCAGAAGAACACCATGTGTCTaGTTCAGCAAAACATCCTCCCATGTGTCTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: FHQAASRRTPCV*FSKTSSHVSSS Trigger: TGAAGAAGACACATGGGAGGATGTTTTGCTGAAGCAGACACATGGTGTTCTTCTGGAAGCTGCCTGGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 72 bp | ATGCTTCAACCTCCTTTATACCCCACAGACCAAAGGTaGGGAAGGAAGATGGTTAATAGGACAAGGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: MLQPPLYPTDQR*GRKMVNRTRRT Trigger: TGTCCTCCTTGTCCTATTAACCATCTTCCTTCCCCACCTTTGGTCTGTGGGGTATAAAGGAGGTTGAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR CAA 90 bp | AGAATTGGGAACAAAACACCCATGGAAAGGAGTTACAGAGACAATGTTTGGAGCGAACCAATGCCAGAGTaGCTCACTGTCTGTTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: RIGNKTPMERSYRDNVWSEPMPE*LTVCWV Trigger: AACCCAACAGACAGTGAGCAACTCTGGCATTGGTTC...GCTCCAAACATTGTCTCTGTAACTCCTTTCCATGGGTGTTTTGTTCCCAATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTTACAGAGACAATGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGAGAGGCCCATTGGACTaGCAAATTTTATATGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: RSYRDNVWSCDERMDHLERGPLD*QILYAP Trigger: TGGGGCATATAAAATTTGCAAGTCCAATGGGCCTCT...CTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 72 bp | GTTTCTCTCTACGGAGTCCTGACAAATAAAGATCAGTaGGGAAAGCAAGGTGAACCAATGCCAGAGTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: VSLYGVLTNKDQ*GKQGEPMPELL Trigger: GAGCAACTCTGGCATTGGTTCACCTTGCTTTCCTCACTGATCTTTATTTGTCAGGACTCCGTAGAGAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 72 bp | CAAGAAGCAGCTGGAACACCTCTTGAAGCTCTTGGCTaGGTTTCTCTCTACGGAGTCCTGACAAATAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: QEAAGTPLEALG*VSLYGVLTNKD Trigger: ATCTTTATTTGTCAGGACTCCGTAGAGAGAAACTCAGCCAAGAGCTTCAAGAGGTGTTCCAGCTGCTTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 72 bp | ACGCTGACACCATTGCACACAGTAGCAAGATTTTGCTaGAAGGACCCTGATATAGCTGTCTCTTGTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: TLTPLHTVARFC*KDPDIAVSCET Trigger: AGTCTCACAAGAGACAGCTATATCAGGGTCCTTTCAGCAAAATCTTGCTACTGTGTGCAATGGTGTCAGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 72 bp | CATGGAAAGGAGTTACAGAGACAATGTTTGGAGCTGTaGCGAAAGGATGGACCATCTAGAGACTGCCATATC | + |
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Preference number: 3 (lower is better) Translates to: HGKELQRQCLEL*RKDGPSRDCHI Trigger: GATATGGCAGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCTTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | ATCAGTGAGGAAAGCAAGGTGAACCAATGCCAGAGTTaGTCACTGTCTGTTGGGTTATACGTACACTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: ISEESKVNQCQS*SLSVGLYVHSF Trigger: AAAAGAGTGTACGTATAACCCAACAGACAGTGAGCAACTCTGGCATTGGTTCACCTTGCTTTCCTCACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR CCA 72 bp | AAAACACCCATGGAAAGGAGTTACAGAGACAATGTTTaGAGCTGTGACGAAAGGATGGACCATCTAGAGACT | + |
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Preference number: 3 (lower is better) Translates to: KTPMERSYRDNV*SCDERMDHLET Trigger: AGTCTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCTTTCCATGGGTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR TCA 72 bp | CCAGAAGAACATCACATGGCACAACTGAGTCTCCAGTaGACTCAGAAATTCCCACTTCAGATAAGATTGGTA | + |
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Preference number: 3 (lower is better) Translates to: PEEHHMAQLSLQ*TQKFPLQIRLV Trigger: TACCAATCTTATCTGAAGTGGGAATTTCTGAGTTCACTGGAGACTCAGTTGTGCCATGTGATGTTCTTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | CAAATAAAGATCAGTGAGGAAAGCAAGGTGAACCAATaGCAGAGTTGCTCACTGTCTGTTGGGTTATACGTA | + |
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Preference number: 3 (lower is better) Translates to: QIKISEESKVNQ*QSCSLSVGLYV Trigger: TACGTATAACCCAACAGACAGTGAGCAACTCTGGCATTGGTTCACCTTGCTTTCCTCACTGATCTTTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| 3UTR GCA 72 bp | GCCCTGGTGAGGTGGGATTTTATGAACACCTCCTATTaGTGGAAATGTTTTTCATCCAATACAAATCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: ALVRWDFMNTSY*WKCFSSNTNPV Trigger: AACAGGATTTGTATTGGATGAAAAACATTTCCAGCAATAGGAGGTGTTCATAAAATCCCACCTCACCAGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| CDS-3UTR CCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGCCTGGTGAGGTCTaGAGCTACTTGAAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PSWMDLEGIILSEVTPPQRPGEV*SYLKVE Trigger: CTCCACTTTCAAGTAGCTCCAGACCTCACCAGGCCT...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| CDS-3UTR TCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAATCGATGGTTGTTTCCTaGGTGGTCCACATCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSWMDLEGIILSEVTPPQSMVVS*VVHIFS Trigger: GGAGAAGATGTGGACCACTCAGGAAACAACCATCGA...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| CDS-3UTR TCA 90 bp | TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGAACGCACAGGGGTGTCTCTaGTCAGAATTCTCCTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: WMDLEGIILSEVTPPQRNAQGCL*SEFSLV Trigger: CACTAAGGAGAATTCTGATCAGAGACACCCCTGTGC...GTTCCTTTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| CDS-3UTR CCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAGCAGAATCAAGGCAATaGCCACCTTTAGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PSWMDLEGIILSEVTPPQAESRQ*PPLAPA Trigger: TGCTGGAGCTAAAGGTGGCCATTGCCTTGATTCTGC...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| CDS-3UTR CCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAACAGCAGGGTTGTGGTaGAGACCCCAAATACTAAGA | + |
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Preference number: 4 (lower is better) Translates to: PSWMDLEGIILSEVTPPQTAGLW*RPQILR Trigger: TCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGT...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
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| CDS-3UTR TCA 90 bp | AGGAGTTACAGAGACAATGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGAGGCAGGAGGCCTGGTaGGGTCTGGAGCTACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSYRDNVWSCDERMDHLERQEAW*GLELLE Trigger: TTCAAGTAGCTCCAGACCTCACCAGGCCTCCTGCCT...CTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CCA 90 bp | ATTGGATGGATCACAGGGCCCCCGATGGAGAAGCTAGAGAAAATACCCAAGGAGCGTTTATCTGGCAGTTaGTCTCCTGGCCAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IGWITGPPMEKLEKIPKERLSGS*SPGQKH Trigger: GTGCTTTTGGCCAGGAGACCAACTGCCAGATAAACG...CTCCTTGGGTATTTTCTCTAGCTTCTCCATCGGGGGCCCTGTGATCCATCCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | ATTGGATGGATCACAGGGCCCCCGATGGAGAAGCTAGAGAAAATACCCAAGGAGCACAAGGGTGCTTTTTaGCAATCTCATCAAGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGWITGPPMEKLEKIPKEHKGAF*QSHQAS Trigger: AGACGCTTGATGAGATTGTCAAAAAGCACCCTTGTG...CTCCTTGGGTATTTTCTCTAGCTTCTCCATCGGGGGCCCTGTGATCCATCCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGCAGTAGACTCTGTCAGGGCAGTAGCCCTGGTGAGGTGGGATTTTATGAAGGTTTTAGGATGTCCTaGTGGAATGCAGGAGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESSRLCQGSSPGEVGFYEGFRMS*WNAGVR Trigger: CCTAACTCCTGCATTCCATCAGGACATCCTAAAACC...TTCATAAAATCCCACCTCACCAGGGCTACTGCCCTGACAGAGTCTACTGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCCATGTGTCTTCTTCAGCAAAACAACCTCTTATGTGTCTTCTTCAGCAAACATACCTGCAGGCAGTaGGTGTCCATCTGGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPMCLLQQNNLLCVFFSKHTCRQ*VSIWEG Trigger: ACCCTCCCAGATGGACACTCACTGCCTGCAGGTATG...TTTGCTGAAGAAGACACATAAGAGGTTGTTTTGCTGAAGAAGACACATGGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAATTCATCTTCAGCCTGTaGAGAAAGAACAATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSWMDLEGIILSEVTPPQFIFSL*RKNNIQ Trigger: CTGGATATTGTTCTTTCTGCACAGGCTGAAGATGAA...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCAGCAAAACATCCTCCCATGTGTCTTCTTCAGCAAAACAACCTCTTATGTTTCCATGCTTGGGTCTaGGGACAGTGTGGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASAKHPPMCLLQQNNLLCFHAWV*GQCGWR Trigger: TCTCCAGCCACACTGTCCTCAGACCCAAGCATGGAA...ACATAAGAGGTTGTTTTGCTGAAGAAGACACATGGGAGGATGTTTTGCTGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGAACACCAAGTTCAAATGTTaGCTTCACGTAAGACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: WMDLEGIILSEVTPPQRNTKFKC*LHVRLI Trigger: TATGAGTCTTACGTGAAGGCAACATTTGAACTTGGT...GTTCCTTTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | AGGAGTTACAGAGACAATGTTTGGAGCTGTGACGAAAGGATGGACCATCTAGAGAGAGGCATCATGTCCTaGCCACATGAAGGTGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSYRDNVWSCDERMDHLERGIMS*PHEGVH Trigger: GTGAACACCTTCATGTGGGCAGGACATGATGCCTCT...CTCTAGATGGTCCATCCTTTCGTCACAGCTCCAAACATTGTCTCTGTAACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CCA 90 bp | AGAATTGGGAACAAAACACCCATGGAAAGGAGTTACAGAGACAATGTTTGGAGCCCTTTAGCTCCAGCATaGCAAACTGCTGCCCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RIGNKTPMERSYRDNVWSPLAPA*QTAARC Trigger: GCATCGGGCAGCAGTTTGCCATGCTGGAGCTAAAGG...GCTCCAAACATTGTCTCTGTAACTCCTTTCCATGGGTGTTTTGTTCCCAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCCATCTCACCAGCCCCTAATAAAGATTCTTAATGCTTCAACCTCCTTTAGCGGAGTGTCTCCTTaGTGCACATTGTGGTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TEPSHQPLIKILNASTSFSGVSP*CTLWCM Trigger: CATACACCACAATGTGCATCAAGGAGACACTCCGCT...AAAGGAGGTTGAAGCATTAAGAATCTTTATTAGGGGCTGGTGAGATGGCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | AAAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCATGTGTCTTCTTGGAGTCCTCGTCCAATaGATGGAGTCAGGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTSSHVSSSAKQPLMCLLGVLVQ*MESGAG Trigger: ACCAGCTCCTGACTCCATGCATTGGACGAGGACTCC...AAGAAGACACATGAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAGCAAAACATCCTCTCATGTGTCTGCTTCAGCAAAACAACCTCTCATGAACTCCTGGAAGCAGTaGCCCTTAGGACTGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFSKTSSHVSASAKQPLMNSWKQ*PLGLSL Trigger: CAAACTCAGTCCTAAGGGCCACTGCTTCCAGGAGTT...CATGAGAGGTTGTTTTGCTGAAGCAGACACATGAGAGGATGTTTTGCTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCCATCTCACCAGCCCCTAATAAAGATTCTTAATGCTTCAACCTCCTTTAGGTCTGGAGCTACTTaGAAGTGGAGCAGAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TEPSHQPLIKILNASTSFRSGAT*KWSRIK Trigger: CTTGATTCTGCTCCACTTTCAAGTAGCTCCAGACCT...AAAGGAGGTTGAAGCATTAAGAATCTTTATTAGGGGCTGGTGAGATGGCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTCACTGTCTGTTGGGTTATACGTACACTCTTTTCAAACATCATGTATCCTGGAGTCAGGAGCTGGTaGAGATACTGCATCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLTVCWVIRTLFSNIMYPGVRSW*RYCIFG Trigger: CCCAAAGATGCAGTATCTGCACCAGCTCCTGACTCC...AGGATACATGATGTTTGAAAAGAGTGTACGTATAACCCAACAGACAGTGAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGCCATCTCACCAGCCCCTAATAAAGATTCTTAATGCTTCAACCTCCTTTCCAGGGTCATCAAGTTaGTGTGTTCAAAAACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: TEPSHQPLIKILNASTSFPGSSS*CVQKPR Trigger: TCGAGGTTTTTGAACACATCAACTTGATGACCCTGG...AAAGGAGGTTGAAGCATTAAGAATCTTTATTAGGGGCTGGTGAGATGGCTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAGCAAAACATCCTCTCATGTGTCTGCTTCAGCAAAACAACCTCTCATGATAGATGTAGAAAAATaGCTGGAAGGGCCCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFSKTSSHVSASAKQPLMIDVEK*LEGPYP Trigger: TGGGTAGGGCCCTTCCAGGCATTTTTCTACATCTAT...CATGAGAGGTTGTTTTGCTGAAGCAGACACATGAGAGGATGTTTTGCTGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CCA 90 bp | AAAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCATGTGTCTTCTTAGTTCCTTGGACCACTaGAGAATGGTAGGAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KTSSHVSSSAKQPLMCLLSSLDH*RMVGRH Trigger: GTGCCTTCCTACCATTCTCCAGTGGTCCAAGGAACT...AAGAAGACACATGAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCACTGTCTGTTGGGTTATACGTACACTCTTTTCAAACATCATGTATCCTGCACATTGTGGTGTATaGCATCTCATCCAGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLTVCWVIRTLFSNIMYPAHCGV*HLIQLF Trigger: GAACAGCTGGATGAGATGTCATACACCACAATGTGC...AGGATACATGATGTTTGAAAAGAGTGTACGTATAACCCAACAGACAGTGAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCACTGTCTGTTGGGTTATACGTACACTCTTTTCAAACATCATGTATCCTTCCATATTATCCTCCTaGAGAAACTTCTGGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTVCWVIRTLFSNIMYPSILSS*RNFWCP Trigger: GGGACACCAGAAGTTTCTTCAGGAGGATAATATGGA...AGGATACATGATGTTTGAAAAGAGTGTACGTATAACCCAACAGACAGTGAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR GCA 90 bp | AAAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCATGTGTCTTCTTATTGATGTATCACTTTaGCTAACTCCTGGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KTSSHVSSSAKQPLMCLLIDVSL*LTPGSS Trigger: ACTGCTTCCAGGAGTTAGGCAAAGTGATACATCAAT...AAGAAGACACATGAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS CCA 90 bp | GGCTCAGGTCGCGCAGCAGTCGCTGTCTCCGCAGGTAGAGCTTCATaGCCTGCATCAGCACCAGCGCCAGGCAGAACACCAAAGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GSGRAAVAVSAGRAS*PASAPAPGRTPKPG Trigger: ACCTGGCTTTGGTGTTCTGCCTGGCGCTGGTGCTGATGCAGGCCATGAAGCTCTACCTGCGGAGACAGCGACTGCTGCGCGACCTGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051400.8 |
||
| CDS-3UTR CAA 90 bp | TGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAAGGAACGGGAGGGTAAGGGGTTaGCTGAGCTCCCTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: WMDLEGIILSEVTPPQRNGRVRG*LSSLEM Trigger: CATCTCCAGGGAGCTCAGCAAACCCCTTACCCTCCC...GTTCCTTTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGTTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCCACCACAAGCCCGATGCAGTTCCTaGGACCACTGGAGAATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PSWMDLEGIILSEVTPPQARCSS*DHWRMV Trigger: TACCATTCTCCAGTGGTCCAAGGAACTGCATCGGGC...TTGTGGTGGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCAACTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS TCA 90 bp | TTCACAGAGTGGGCCATCGTGTCCACACATGGTTTTAGGATGTCCTaGTGGAATGCAGGAGTTAGGAGGCAGCGGTGTTGGAACCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FTEWAIVSTHGFRMS*WNAGVRRQRCWNHL Trigger: CAGGTGGTTCCAACACCGCTGCCTCCTAACTCCTGCATTCCATCAGGACATCCTAAAACCATGTGTGGACACGATGGCCCACTCTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS CCA 90 bp | CTCAAGGGGTCAAAGACCTTTGGGTCGTTCCAGACAGCAGGGTTGTaGTGGAGACCCCAAATACTAAGAACCACAGTCATACCTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKGSKTFGSFQTAGL*WRPQILRTTVIPAG Trigger: GCCTGCAGGTATGACTGTGGTTCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAACGACCCAAAGGTCTTTGACCCCTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS CCA 90 bp | AAGGGGTCAAAGACCTTTGGGTCGTTCCAGACAGCAGGGTTGTGGTaGAGACCCCAAATACTAAGAACCACAGTCATACCTGCAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGSKTFGSFQTAGLW*RPQILRTTVIPAGS Trigger: ACTGCCTGCAGGTATGACTGTGGTTCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAACGACCCAAAGGTCTTTGACCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS TCA 90 bp | CCTGGAAGGGCCCTACCCAGCAGGGGAAGGCACAAGGGTGCTTTTTaGCAATCTCATCAAGCGTCTCCATATTATCCTCCTGAAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: PGRALPSRGRHKGAF*QSHQASPYYPPEET Trigger: AGTTTCTTCAGGAGGATAATATGGAGACGCTTGATGAGATTGTCAAAAAGCACCCTTGTGCCTTCCCCTGCTGGGTAGGGCCCTTCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGCAGTAGACTCTGTCAGGGCAGTAGCCCTGGTGAGGTGGGATTTTATGAAGCACAAGGGTGCTTTTaGACAATCTCATCAAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSRLCQGSSPGEVGFYEAQGCF*TISSSV Trigger: GACGCTTGATGAGATTGTCAAAAAGCACCCTTGTGC...TTCATAAAATCCCACCTCACCAGGGCTACTGCCCTGACAGAGTCTACTGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS CCA 90 bp | CCATCTAAATTCAGGAGTCCTCGTCCAATGCATGGAGTCAGGAGCTaGTGCAGATACTGCATCTTTGGGTCTGTTCTGCTCAGAAATATC | + |
|
Preference number: 5 (lower is better) Translates to: PSKFRSPRPMHGVRS*CRYCIFGSVLLRNI Trigger: GATATTTCTGAGCAGAACAGACCCAAAGATGCAGTATCTGCACCAGCTCCTGACTCCATGCATTGGACGAGGACTCCTGAATTTAGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS GCA 90 bp | TCTAAATTCAGGAGTCCTCGTCCAATGCATGGAGTCAGGAGCTGGTaGAGATACTGCATCTTTGGGTCTGTTCTGCTCAGAAATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKFRSPRPMHGVRSW*RYCIFGSVLLRNIF Trigger: GAAGATATTTCTGAGCAGAACAGACCCAAAGATGCAGTATCTGCACCAGCTCCTGACTCCATGCATTGGACGAGGACTCCTGAATTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCATGTGTCTTCTTCAGCAAAACAACCTCTTATGTGTCTTCTTCAGCAAATTCCAGACAGCAGGGTaGTGGTGGAGACCCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: PPMCLLQQNNLLCVFFSKFQTAG*WWRPQI Trigger: TATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAA...TTTGCTGAAGAAGACACATAAGAGGTTGTTTTGCTGAAGAAGACACATGGGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGATGGATCACAGGGCCCCCGATGGAGAAGCTAGAGAAAATACCCAAGGAGAATATCCAGAAAAATTaGAGACGTCTGAGTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IGWITGPPMEKLEKIPKENIQKN*RRLSVI Trigger: GATGACACTCAGACGTCTCAAATTTTTCTGGATATT...CTCCTTGGGTATTTTCTCTAGCTTCTCCATCGGGGGCCCTGTGATCCATCCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS GCA 90 bp | ATGGAGTCAGGAGCTGGTGCAGATACTGCATCTTTGGGTCTGTTCTaGTCAGAAATATCTTCGCATAGTCTGGGTCATAGATGTAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: MESGAGADTASLGLF*SEISSHSLGHRCRK Trigger: TTTTCTACATCTATGACCCAGACTATGCGAAGATATTTCTGAGCAGAACAGACCCAAAGATGCAGTATCTGCACCAGCTCCTGACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | GTCTTCTTCAGCAAAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCGCAGATACTGCATCTTaGGGTCTGTTCTGCTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VFFSKTSSHVSSSAKQPLADTAS*GLFCSE Trigger: TTCTGAGCAGAACAGACCCAAAGATGCAGTATCTGC...GAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTTTGCTGAAGAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | AGAATTGGGAACAAAACACCCATGGAAAGGAGTTACAGAGACAATGTTTGGAGCCAAAAACCTCGATGGTaGTTTCCTGAGTGGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RIGNKTPMERSYRDNVWSQKPRW*FPEWST Trigger: TGTGGACCACTCAGGAAACAACCATCGAGGTTTTTG...GCTCCAAACATTGTCTCTGTAACTCCTTTCCATGGGTGTTTTGTTCCCAATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTCAGCAAAACATCCTCTCATGTGTCTGCTTCAGCAAAACAACCTCTCATGAAGCGGAGTGTCTCCTaGATGCACATTGTGGTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FFSKTSSHVSASAKQPLMKRSVS*MHIVVY Trigger: ATACACCACAATGTGCATCAAGGAGACACTCCGCTT...CATGAGAGGTTGTTTTGCTGAAGCAGACACATGAGAGGATGTTTTGCTGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS TCA 90 bp | AGGGTCATCAAGTTGATGTGTTCAAAAACCTCGATGGTTGTTTCCTaGGTGGTCCACATCTTCTCCCATTTATCCAGCATCACTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RVIKLMCSKTSMVVS*VVHIFSHLSSITFT Trigger: TGTGAAAGTGATGCTGGATAAATGGGAGAAGATGTGGACCACTCAGGAAACAACCATCGAGGTTTTTGAACACATCAACTTGATGACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | AAACATCCTCTCATGTGTCTTCTTCAGCAAAACAACCTCTCATGTGTCTTCTTCGAGGTCTGGAGCTACTaGAAAGTGGAGCAGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: KHPLMCLLQQNNLSCVFFEVWSY*KVEQNQ Trigger: TTGATTCTGCTCCACTTTCAAGTAGCTCCAGACCTC...GAAGAAGACACATGAGAGGTTGTTTTGCTGAAGAAGACACATGAGAGGATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGCCATCTCACCAGCCCCTAATAAAGATTCTTAATGCTTCAACCTCCTTTCACCAAGTTCAAATGTaGCCTTCACGTAAGACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TEPSHQPLIKILNASTSFHQVQM*PSRKTH Trigger: ATGAGTCTTACGTGAAGGCAACATTTGAACTTGGTG...AAAGGAGGTTGAAGCATTAAGAATCTTTATTAGGGGCTGGTGAGATGGCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCCATGTGTCTTCTTCAGCAAAACAACCTCTTATGTGTCTTCTTCAGCAAAGTCATCCTGCTTTACTaGATTCTTGAGGATTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPMCLLQQNNLLCVFFSKVILLY*ILEDFL Trigger: AAGAAAATCCTCAAGAATCAAGTAAAGCAGGATGAC...TTTGCTGAAGAAGACACATAAGAGGTTGTTTTGCTGAAGAAGACACATGGGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106545.8 |
||
| CDS TCA 90 bp | AAATTATGTCATGATGATGCCAGAAATTGTACAAGCGAGAAGATATaGTTTCACCAAGTTCAAATGTTGCCTTCACGTAAGACTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLCHDDARNCTSEKI*FHQVQMLPSRKTHR Trigger: CCTATGAGTCTTACGTGAAGGCAACATTTGAACTTGGTGAAATCATATCTTCTCGCTTGTACAATTTCTGGCATCATCATGACATAATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS GCA 72 bp | ATCAGCACCAGCGCCAGGCAGAACACCAAAGCCAGGTaGAAGGGCCGCGCCCAACGAGTCTCCAGCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISTSARQNTKAR*KGRAQRVSSQE Trigger: CTCCTGGCTGGAGACTCGTTGGGCGCGGCCCTTGCACCTGGCTTTGGTGTTCTGCCTGGCGCTGGTGCTGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051400.8 |
||
| CDS GCA 72 bp | GAGCCAGGAGATGCTAGCTGCAGAGGCATCATGTCCTaGCCACATGAAGGTGTTCACCTCAGCCCGAAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EPGDASCRGIMS*PHEGVHLSPKV Trigger: GACCTTCGGGCTGAGGTGAACACCTTCATGTGGGCAGGACATGATGCCTCTGCAGCTAGCATCTCCTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS TCA 72 bp | TGGGCCATCGTGTCCACACATGGTTTTAGGATGTCCTaGTGGAATGCAGGAGTTAGGAGGCAGCGGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: WAIVSTHGFRMS*WNAGVRRQRCW Trigger: CCAACACCGCTGCCTCCTAACTCCTGCATTCCATCAGGACATCCTAAAACCATGTGTGGACACGATGGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
||
| CDS TCA 72 bp | CATGAAGGTGTTCACCTCAGCCCGAAGGTCAGCATCTaGGAAGGCTCGTTCATCTTCAGCCTGTGCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: HEGVHLSPKVSI*EGSFIFSLCRK Trigger: CTTTCTGCACAGGCTGAAGATGAACGAGCCTTCTCAGATGCTGACCTTCGGGCTGAGGTGAACACCTTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS GCA 72 bp | AGGAGTCCTCGTCCAATGCATGGAGTCAGGAGCTGGTaGAGATACTGCATCTTTGGGTCTGTTCTGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: RSPRPMHGVRSW*RYCIFGSVLLR Trigger: TCTGAGCAGAACAGACCCAAAGATGCAGTATCTGCACCAGCTCCTGACTCCATGCATTGGACGAGGACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS GCA 72 bp | ACCTGGGCCCATCTAAATTCAGGAGTCCTCGTCCAATaGATGGAGTCAGGAGCTGGTGCAGATACTGCATCT | + |
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Preference number: 6 (lower is better) Translates to: TWAHLNSGVLVQ*MESGAGADTAS Trigger: AGATGCAGTATCTGCACCAGCTCCTGACTCCATGCATTGGACGAGGACTCCTGAATTTAGATGGGCCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS CAA 72 bp | GGGTCAAAGACCTTTGGGTCGTTCCAGACAGCAGGGTaGTGGTGGAGACCCCAAATACTAAGAACCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: GSKTFGSFQTAG*WWRPQILRTTV Trigger: GACTGTGGTTCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAACGACCCAAAGGTCTTTGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS TCA 72 bp | GCCCTACCCAGCAGGGGAAGGCACAAGGGTGCTTTTTaGCAATCTCATCAAGCGTCTCCATATTATCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ALPSRGRHKGAF*QSHQASPYYPP Trigger: AGGAGGATAATATGGAGACGCTTGATGAGATTGTCAAAAAGCACCCTTGTGCCTTCCCCTGCTGGGTAGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS GCA 72 bp | TGGAAGGGCCCTACCCAGCAGGGGAAGGCACAAGGGTaGTTTTTGACAATCTCATCAAGCGTCTCCATATTA | + |
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Preference number: 6 (lower is better) Translates to: WKGPTQQGKAQG*FLTISSSVSIL Trigger: TAATATGGAGACGCTTGATGAGATTGTCAAAAAGCACCCTTGTGCCTTCCCCTGCTGGGTAGGGCCCTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS CAA 90 bp | AATCTCAAGGGGTCAAAGACCTTTGGGTCGTTCCAGACAGCAGGGTaGTGGTGGAGACCCCAAATACTAAGAACCACAGTCATACCTGCA | + |
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Preference number: 6 (lower is better) Translates to: NLKGSKTFGSFQTAG*WWRPQILRTTVIPA Trigger: TGCAGGTATGACTGTGGTTCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAACGACCCAAAGGTCTTTGACCCCTTGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS TCA 72 bp | TTGACAATCTCATCAAGCGTCTCCATATTATCCTCCTaGAGAAACTTCTGGTGTCCCAGGAGCCAGTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: LTISSSVSILSS*RNFWCPRSQWA Trigger: CGCCCACTGGCTCCTGGGACACCAGAAGTTTCTTCAGGAGGATAATATGGAGACGCTTGATGAGATTGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS TCA 72 bp | TGGATGGGACAGGAGGAATCAAGCGGAGTGTCTCCTTaGTGCACATTGTGGTGTATGACATCTCATCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WMGQEESSGVSP*CTLWCMTSHPA Trigger: AGCTGGATGAGATGTCATACACCACAATGTGCATCAAGGAGACACTCCGCTTGATTCCTCCTGTCCCATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS CCA 72 bp | AAGACCTTTGGGTCGTTCCAGACAGCAGGGTTGTGGTaGAGACCCCAAATACTAAGAACCACAGTCATACCT | + |
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Preference number: 6 (lower is better) Translates to: KTFGSFQTAGLW*RPQILRTTVIP Trigger: AGGTATGACTGTGGTTCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAACGACCCAAAGGTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS GCA 72 bp | CGTCCAATGCATGGAGTCAGGAGCTGGTGCAGATACTaGATCTTTGGGTCTGTTCTGCTCAGAAATATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RPMHGVRSWCRY*IFGSVLLRNIF Trigger: GAAGATATTTCTGAGCAGAACAGACCCAAAGATGCAGTATCTGCACCAGCTCCTGACTCCATGCATTGGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS CCA 72 bp | TCAAAGACCTTTGGGTCGTTCCAGACAGCAGGGTTGTaGTGGAGACCCCAAATACTAAGAACCACAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: SKTFGSFQTAGL*WRPQILRTTVI Trigger: TATGACTGTGGTTCTTAGTATTTGGGGTCTCCACCACAACCCTGCTGTCTGGAACGACCCAAAGGTCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS GCA 72 bp | CAAGTTCAAATGTTGCCTTCACGTAAGACTCATAGGTaGCGTTTATCTGGCAGTTGGTCTCCTGGCCAAAAG | + |
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Preference number: 6 (lower is better) Translates to: QVQMLPSRKTHR*RLSGSWSPGQK Trigger: CTTTTGGCCAGGAGACCAACTGCCAGATAAACGGCACCTATGAGTCTTACGTGAAGGCAACATTTGAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS CCA 72 bp | TGGGTCTGTTCTGCTCAGAAATATCTTCGCATAGTCTaGGTCATAGATGTAGAAAAATGCCTGGAAGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WVCSAQKYLRIV*VIDVEKCLEGP Trigger: GGGCCCTTCCAGGCATTTTTCTACATCTATGACCCAGACTATGCGAAGATATTTCTGAGCAGAACAGACCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS TCA 72 bp | AAGTTGATGTGTTCAAAAACCTCGATGGTTGTTTCCTaGGTGGTCCACATCTTCTCCCATTTATCCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: KLMCSKTSMVVS*VVHIFSHLSSI Trigger: GATGCTGGATAAATGGGAGAAGATGTGGACCACTCAGGAAACAACCATCGAGGTTTTTGAACACATCAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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| CDS TCA 72 bp | CATGATGATGCCAGAAATTGTACAAGCGAGAAGATATaGTTTCACCAAGTTCAAATGTTGCCTTCACGTAAG | + |
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Preference number: 6 (lower is better) Translates to: HDDARNCTSEKI*FHQVQMLPSRK Trigger: CTTACGTGAAGGCAACATTTGAACTTGGTGAAATCATATCTTCTCGCTTGTACAATTTCTGGCATCATCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051400.8 ENSMUST00000106545.8 |
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