Pregenerated sensors for CYP4V3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079057Ensembl transcript IDs: ENSMUST00000095328.6
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACTAAAGCACTCAGGCCAAACACTGCCCTTGGTGTCCAAGGTGTaGTTGAGAGTAGGTGGGAACCCAGCATCATTCAGGGTTCATCCT | + |
|
Preference number: 1 (lower is better) Translates to: SLKHSGQTLPLVSKV*LRVGGNPASFRVHP Trigger: AGGATGAACCCTGAATGATGCTGGGTTCCCACCTACTCTCAACCACACCTTGGACACCAAGGGCAGTGTTTGGCCTGAGTGCTTTAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR TCA 90 bp | TTTCTGTGGCCACTTGAACTTCAAAAGCCACTAACTAAGCTTCTGTaGGAGGTTAGATGTGCTGGAGAGGGATATCTTCCAGTAATAAGA | + |
|
Preference number: 1 (lower is better) Translates to: FLWPLELQKPLTKLL*EVRCAGEGYLPVIR Trigger: TCTTATTACTGGAAGATATCCCTCTCCAGCACATCTAACCTCTCACAGAAGCTTAGTTAGTGGCTTTTGAAGTTCAAGTGGCCACAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR TCA 90 bp | AGAGGAATTACAAGAAAGACATGGCCACATCAAGGACATAAATCCTaGGTTCTAACTCATCCAATCACGGTCTTGACTTCCACAACACCA | + |
|
Preference number: 1 (lower is better) Translates to: RGITRKTWPHQGHKS*VLTHPITVLTSTTP Trigger: TGGTGTTGTGGAAGTCAAGACCGTGATTGGATGAGTTAGAACTCAGGATTTATGTCCTTGATGTGGCCATGTCTTTCTTGTAATTCCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR CAA 90 bp | CTAAAGCACTCAGGCCAAACACTGCCCTTGGTGTCCAAGGTGTGGTaGAGAGTAGGTGGGAACCCAGCATCATTCAGGGTTCATCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LKHSGQTLPLVSKVW*RVGGNPASFRVHPS Trigger: AGAAGGATGAACCCTGAATGATGCTGGGTTCCCACCTACTCTCAACCACACCTTGGACACCAAGGGCAGTGTTTGGCCTGAGTGCTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATGTTTCTGTGGCCACTTaGACTTCAAAAGCCACTAAC | + |
|
Preference number: 2 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHVSVAT*TSKATN Trigger: GTTAGTGGCTTTTGAAGTTCAAGTGGCCACAGAAAC...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATGAGAGTAAATCAGAATaGAAGTGGAGAGGCCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LSSVPWGSLESLTALFGNESKSE*KWRGLS Trigger: ACTGAGGCCTCTCCACTTCCATTCTGATTTACTCTC...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATACCAGGAAGTTTCTGTaGCCACTTGAACTTCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSSVPWGSLESLTALFGNTRKFL*PLELQK Trigger: CTTTTGAAGTTCAAGTGGCCACAGAAACTTCCTGGT...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATCGTTATTGTGTCGACTaGGAACAGAAAGAAGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHRYCVD*EQKEDS Trigger: AGAATCTTCTTTCTGTTCTCAGTCGACACAATAACG...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATCACATTGTTTTCCTTTaGATGCTGATTCATGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: LSSVPWGSLESLTALFGNHIVFL*MLIHGY Trigger: GTATCCATGAATCAGCATCCAAAGGAAAACAATGTG...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCCCCAGGGAAGACCTCTaGCTTTACCCTGCTTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SRGSISDLKFLLKINVSFPREDL*LYPAWV Trigger: GACCCAAGCAGGGTAAAGCCAGAGGTCTTCCCTGGG...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCTTGAGTTCTGTGCCCTaGGGCTCTCTGGAGAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: SRGSISDLKFLLKINVSFLSSVP*GSLESL Trigger: TAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | AAATATATTGTGGGAGAGAGTAAATCAGAATGGAAGTGGAGAGGCCTCAGTGTAGCCATGGCAGAAATTTaGTGTCTCCTCTACTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: KYIVGESKSEWKWRGLSVAMAEI*CLLYSI Trigger: TATGGAGTAGAGGAGACATCAAATTTCTGCCATGGC...TACACTGAGGCCTCTCCACTTCCATTCTGATTTACTCTCTCCCACAATATATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCATTCAGTTGACAGCTTaGGGAGAATACTCCATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: SRGSISDLKFLLKINVSFIQLTA*GEYSMG Trigger: CCCCATGGAGTATTCTCCCCAAGCTGTCAACTGAAT...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTTTAAGCCCATTATCCTaGGGGCTTAGTGACCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: TKTSHATNAVKNDLLREVLSPLS*GLSDPT Trigger: TGTTGGGTCACTAAGCCCTCAGGATAATGGGCTTAA...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CCA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTTTAAATGATGATCTTTaGGCAGGCCGATGGTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TKTSHATNAVKNDLLREVLNDDL*AGRWSL Trigger: GAGGGACCATCGGCCTGCCCAAAGATCATCATTTAA...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTGGAATGGAATTCAGTTaGCAGCTTGGGGAGAATACT | + |
|
Preference number: 2 (lower is better) Translates to: TKTSHATNAVKNDLLREVGMEFS*QLGENT Trigger: AGTATTCTCCCCAAGCTGTCAACTGAATTCCATTCC...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCCTAAAAGTCATTGTGTaGGGAATAGTAGCCTTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SRGSISDLKFLLKINVSFLKVIV*GIVALC Trigger: ACACAAGGCTACTATTCCTCACACAATGACTTTTAG...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR GCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCAGATTCTACCCTTTCTaGTTCCTGCTTCTAATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: SRGSISDLKFLLKINVSFRFYPF*FLLLIA Trigger: AGCAATTAGAAGCAGGAAGCAGAAAGGGTAGAATCT...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCTTTTCCTTTGGATGCTaGTTCATGGATACAGATTCT | + |
|
Preference number: 2 (lower is better) Translates to: SRGSISDLKFLLKINVSFFSFGC*FMDTDS Trigger: AGAATCTGTATCCATGAATCAGCATCCAAAGGAAAA...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR TCA 72 bp | GAACAGAAAGAAGATTCTAGCACACAGTCCACGAGGTaGCTGTACCTTGACAGGGGCATGCAAGGGGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EQKEDSSTQSTR*LYLDRGMQGAC Trigger: GCAGGCCCCTTGCATGCCCCTGTCAAGGTACAGTCACCTCGTGGACTGTGTGCTAGAATCTTCTTTCTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR CCA 72 bp | ACTGCCCTTGGTGTCCAAGGTGTGGTTGAGAGTAGGTaGGAACCCAGCATCATTCAGGGTTCATCCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TALGVQGVVESR*EPSIIQGSSFS Trigger: AGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCACCTACTCTCAACCACACCTTGGACACCAAGGGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CAA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATAGCCATGGCAGAAATTaGATGTCTCCTCTACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHSHGRN*MSPLLH Trigger: ATGGAGTAGAGGAGACATCAAATTTCTGCCATGGCT...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR GCA 72 bp | TGGGCAGGCCGATGGTCCCTCTGTTATAATTTTTCCTaGATGTTTATGTCAGTGCTGCTCCAGCTAGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: WAGRWSLCYNFS*MFMSVLLQLAN Trigger: GTTAGCTAGCTGGAGCAGCACTGACATAAACATGCAGGAAAAATTATAACAGAGGGACCATCGGCCTGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTGATGTGGCACCCATGTaGGTAAGAAACACACCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSVPWGSLESLTALFGNIDVAPM*VRNTPK Trigger: TTTTGGTGTGTTTCTTACCAACATGGGTGCCACATC...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTAGGAATGGAATTCAGTaGACAGCTTGGGGAGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: SSVPWGSLESLTALFGNIRNGIQ*TAWGEY Trigger: GTATTCTCCCCAAGCTGTCAACTGAATTCCATTCCT...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR GCA 72 bp | TCCCCACGCATCCCTTTCTTTCCATCTCCTCGAAGTTaGTCCAGAGGATCAATCAGTGATCTAAAGTTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SPRIPFFPSPRS*SRGSISDLKFL Trigger: AAGAAACTTTAGATCACTGATTGATCCTCTGGAGCAACTTCGAGGAGATGGAAAGAAAGGGATGCGTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTTCACATTGTTTTCCTTaGGATGCTGATTCATGGATA | + |
|
Preference number: 3 (lower is better) Translates to: SSVPWGSLESLTALFGNISHCFP*DADSWI Trigger: TATCCATGAATCAGCATCCAAAGGAAAACAATGTGA...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR GCA 72 bp | TGGATGCTGATTCATGGATACAGATTCTACCCTTTCTaGTTCCTGCTTCTAATTGCTAGGCCATGGAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: WMLIHGYRFYPF*FLLLIARPWKT Trigger: GGTTTTCCATGGCCTAGCAATTAGAAGCAGGAAGCAGAAAGGGTAGAATCTGTATCCATGAATCAGCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR CCA 72 bp | AAAAATCCCAGGGAAGACCTCTGGCTTTACCCTGCTTaGGTCAATAAACTCAAACAGAGAAAGCAGCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: KNPREDLWLYPA*VNKLKQRKQLI Trigger: TATGAGCTGCTTTCTCTGTTTGAGTTTATTGACCCAAGCAGGGTAAAGCCAGAGGTCTTCCCTGGGATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR TCA 72 bp | ACAAGAAAGACATGGCCACATCAAGGACATAAATCCTaGGTTCTAACTCATCCAATCACGGTCTTGACTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TRKTWPHQGHKS*VLTHPITVLTS Trigger: GGAAGTCAAGACCGTGATTGGATGAGTTAGAACTCAGGATTTATGTCCTTGATGTGGCCATGTCTTTCTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR CCA 72 bp | GCCTTTTCACATTGTTTTCCTTTGGATGCTGATTCATaGATACAGATTCTACCCTTTCTGCTTCCTGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: AFSHCFPLDADS*IQILPFLLPAS Trigger: AGAAGCAGGAAGCAGAAAGGGTAGAATCTGTATCCATGAATCAGCATCCAAAGGAAAACAATGTGAAAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR CCA 72 bp | ATAGTAGCCTTGTGTGCCAAATTAAAATGCAAGGAATaGAATTCAGTTGACAGCTTGGGGAGAATACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: IVALCAKLKCKE*NSVDSLGRILH Trigger: ATGGAGTATTCTCCCCAAGCTGTCAACTGAATTCCATTCCTTGCATTTTAATTTGGCACACAAGGCTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| 3UTR CCA 72 bp | AAATATATTGTGGGAGAGAGTAAATCAGAATGGAAGTaGAGAGGCCTCAGTGTAGACATTTTAGCTACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: KYIVGESKSEWK*RGLSVDILATF Trigger: AAAAGTAGCTAAAATGTCTACACTGAGGCCTCTCCACTTCCATTCTGATTTACTCTCTCCCACAATATATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATCGTCCAGTCTTCCTCTaGCTTCCTTTCTTTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPWGSLESLTALFGNRPVFL*LPFFDS Trigger: CGAGTCAAAGAAAGGAAGGCAGAGGAAGACTGGACG...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATCACCTCCACATTCTCTaGCTTATAAAGTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPWGSLESLTALFGNHLHIL*LIKCHQ Trigger: CTGGTGGCACTTTATAAGGCAGAGAATGTGGAGGTG...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATGAATCATTATTGCTTTaGGCTCCGATGTTCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHESLLL*APMFFP Trigger: GGGGAAGAACATCGGAGCTCAAAGCAATAATGATTC...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATGGTATAAGGACCAGTTaGTTGCAGCAGCAGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHGIRTS*LQQQLY Trigger: ATACAACTGCTGCTGCAATCAACTGGTCCTTATACC...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATTCTCGGATGTCTTCCTaGCTTAATCTGTTTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHSRMSS*LNLFPS Trigger: GGAAGGAAACAGATTAAGCCAGGAAGACATCCGAGA...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATCTTCTCTCTTCTGGTTaGATTCTACCCAAAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPWGSLESLTALFGNLLSSG*ILPKTA Trigger: GGCAGTTTTGGGTAGAATCCAACCAGAAGAGAGAAG...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTGATTCTACCCAAAACTaGCTCAGGATACAGGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWGSLESLTALFGNIDSTQN*LRIQAR Trigger: TCTTGCCTGTATCCTGAGGCAGTTTTGGGTAGAATC...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATTCCAGAATGGTAAAATaGAAAGTGGGCGTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPWGSLESLTALFGNSRMVK*KVGVSI Trigger: GATGCTAACGCCCACTTTCCATTTTACCATTCTGGA...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCGGCCACCGACGGGATTaGCCGCATCTGCTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSISDLKFLLKINVSFGHRRD*PHLLPF Trigger: AAATGGCAGCAGATGCGGTCAATCCCGTCGGTGGCC...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATATGACAGCAAACTTTTaGCCAATACAGTTTCGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHMTANF*PIQFRG Trigger: ACCTCGAAACTGTATTGGTCAAAAGTTTGCTGTCAT...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTGTAGGGAATGATGATTaGTTCCGTTCCTTTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWGSLESLTALFGNIVGNDD*FRSFCD Trigger: GTCACAAAAGGAACGGAAGCAATCATCATTCCCTAC...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTACTCGGAATCATTATTaGTTTGAGCTCCGATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWGSLESLTALFGNITRNHY*FELRCS Trigger: AGAACATCGGAGCTCAAAGCAATAATGATTCCGAGT...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTAGTTCTTCTCTCTTCTaGTTGGATTCTACCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVPWGSLESLTALFGNISSSLF*LDSTQN Trigger: GTTTTGGGTAGAATCCAACCAGAAGAGAGAAGAACT...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATACCAATATATTTGCTTaGTCATTCATGACATCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHTNIFA*SFMTSK Trigger: CTTGGATGTCATGAATGAGCAAGCAAATATATTGGT...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | AAATATATTGTGGGAGAGAGTAAATCAGAATGGAAGTGGAGAGGCCTCAGTGTAAAGTATGTAGGCATTTaGGTCCCCTTTTGTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KYIVGESKSEWKWRGLSVKYVGI*VPFCGP Trigger: GGGACCACAAAAGGGGACTCAAATGCCTACATACTT...TACACTGAGGCCTCTCCACTTCCATTCTGATTTACTCTCTCCCACAATATATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTACTTCATCCAGCTCCTaGTCCACTTTCCTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: TKTSHATNAVKNDLLREVTSSSS*STFLWT Trigger: AGTCCAGAGGAAAGTGGATCAGGAGCTGGATGAAGT...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCCTTCCGTTCCTTTTGTaGCTTTGTAACCGCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSISDLKFLLKINVSFLPFLL*LCNRPL Trigger: AAGTGGGCGGTTACAAAGTCACAAAAGGAACGGAAG...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCGGACTTCTGGATTCGTaGCCAATAGGTATAAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSISDLKFLLKINVSFGLLDS*PIGIRT Trigger: GGTCCTTATACCTATTGGGCACGAATCCAGAAGTCC...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCAAGGTGACAGGACGATaGGATCTTCCAAACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGSISDLKFLLKINVSFKVTGR*DLPNTS Trigger: TGAAGTGTTTGGAAGATCCCATCGTCCTGTCACCTT...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTAGGTCCAGCAGAAAATaGCACATAGGCATAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TKTSHATNAVKNDLLREVRSSRK*HIGIGM Trigger: CATCCCTATGCCTATGTGCCATTTTCTGCTGGACCT...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR TCA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTGTCTCCTCTTCAGCTTaGTCCAGATGCCATTATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKTSHATNAVKNDLLREVVSSSA*SRCHYL Trigger: CAAATAATGGCATCTGGATCAAGCTGAAGAGGAGAC...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCAAAATTCTGCGTTGTTaGGCTTCATATAAAGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSISDLKFLLKINVSFKILRC*ASYKAR Trigger: ACGCGCTTTATATGAAGCCCAACAACGCAGAATTTT...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCCCAGATGCCATTATTTaGCCTAAGAATCAAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSISDLKFLLKINVSFPDAII*PKNQIS Trigger: GGAGATTTGATTCTTAGGCCAAATAATGGCATCTGG...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 90 bp | AAGCGCGTGTCCCACCAAGGGGTAGGCGCGGGCCACCGACGGGATTaGCCGCATCTGCTGCCATTTCCGCGCGTAGCTTACCAGCATCGG | + |
|
Preference number: 5 (lower is better) Translates to: KRVSHQGVGAGHRRD*PHLLPFPRVAYQHR Trigger: CCGATGCTGGTAAGCTACGCGCGGAAATGGCAGCAGATGCGGTCAATCCCGTCGGTGGCCCGCGCCTACCCCTTGGTGGGACACGCGCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 90 bp | GGCATAGGGATGGCGTCCTTGGGAATTTTCAGGAAAGAACCGCTCTaGTCGGAATTCCTCTGGATCTGGGAAGTATCTGGGGTCTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GIGMASLGIFRKEPL*SEFLWIWEVSGVSV Trigger: CACCGAGACCCCAGATACTTCCCAGATCCAGAGGAATTCCGACCAGAGCGGTTCTTTCCTGAAAATTCCCAAGGACGCCATCCCTATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS GCA 90 bp | TTTGGAGGGGATAGGACCCCTGCCAGCACCCGTCCAGTCTTCCTCTaGCTTCCTTTCTTTGACTCGTTCAGCAATGACATTGTTGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FGGDRTPASTRPVFL*LPFFDSFSNDIVGE Trigger: TTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAAGACTGGACGGGTGCTGGCAGGGGTCCTATCCCCTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | AAATATATTGTGGGAGAGAGTAAATCAGAATGGAAGTGGAGAGGCCTCAGTGTAGGGCCACCGACGGGATaGACCGCATCTGCTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KYIVGESKSEWKWRGLSVGPPTG*TASAAI Trigger: AATGGCAGCAGATGCGGTCAATCCCGTCGGTGGCCC...TACACTGAGGCCTCTCCACTTCCATTCTGATTTACTCTCTCCCACAATATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 90 bp | GGCCTAAGAATCAAATCTCCAGCCAGGCCGAGTTCTTCTCTCTTCTaGTTGGATTCTACCCAAAACTGCCTCAGGATACAGGCAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: GLRIKSPARPSSSLF*LDSTQNCLRIQARM Trigger: CATTCTTGCCTGTATCCTGAGGCAGTTTTGGGTAGAATCCAACCAGAAGAGAGAAGAACTCGGCCTGGCTGGAGATTTGATTCTTAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATAAAGTATGTAGGCATTaGAGTCCCCTTTTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSVPWGSLESLTALFGNKVCRH*SPLLWS Trigger: GGACCACAAAAGGGGACTCAAATGCCTACATACTTT...ATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATAGGTATAAGGACCAGTaGATTGCAGCAGCAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHRYKDQ*IAAAVV Trigger: TACAACTGCTGCTGCAATCAACTGGTCCTTATACCT...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS GCA 90 bp | CTTAGAACTGGTCAAAATCACCTCCACATTCTCTGCCTTATAAAGTaGCACCAGGGGCACGGGTCCAATCCAAAGTTTAATGATCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRTGQNHLHILCLIK*HQGHGSNPKFNDRQ Trigger: CTGCCGATCATTAAACTTTGGATTGGACCCGTGCCCCTGGTGGCACTTTATAAGGCAGAGAATGTGGAGGTGATTTTGACCAGTTCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | TGGGAACCCAGCATCATTCAGGGTTCATCCTTCTCTCCTTTCTTCCCCACGCATTGTCTCCTCTTCAGCTaGATCCAGATGCCATTATTT | + |
|
Preference number: 5 (lower is better) Translates to: WEPSIIQGSSFSPFFPTHCLLFS*IQMPLF Trigger: AAATAATGGCATCTGGATCAAGCTGAAGAGGAGACA...ATGCGTGGGGAAGAAAGGAGAGAAGGATGAACCCTGAATGATGCTGGGTTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 90 bp | CCCAAAACTGCCTCAGGATACAGGCAAGAATGGTCTTCTCCTCCATaGCAGCAAACTTTTGACCAATACAGTTTCGAGGTCCAGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PKTASGYRQEWSSPP*QQTFDQYSFEVQQK Trigger: TTTCTGCTGGACCTCGAAACTGTATTGGTCAAAAGTTTGCTGTCATGGAGGAGAAGACCATTCTTGCCTGTATCCTGAGGCAGTTTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 90 bp | GTCATCTTCATGTCTCCTCTTCAGCTTGATCCAGATGCCATTATTTaGCCTAAGAATCAAATCTCCAGCCAGGCCGAGTTCTTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VIFMSPLQLDPDAII*PKNQISSQAEFFSL Trigger: AAGAGAGAAGAACTCGGCCTGGCTGGAGATTTGATTCTTAGGCCAAATAATGGCATCTGGATCAAGCTGAAGAGGAGACATGAAGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTGCCCTGGGGCTCTCTGGAGAGTCTAACAGCCCTGTTTGGTAATATTACAATTAAAGGCTTCTaGGTTGACGTGTTTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVPWGSLESLTALFGNITIKGF*VDVFFK Trigger: CTTGAAAAACACGTCAACCAAGAAGCCTTTAATTGT...AATATTACCAAACAGGGCTGTTAGACTCTCCAGAGAGCCCCAGGGCACAGAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 90 bp | CTCATCCTATACACTGTACGGACATACTCGGAATCATTATTGCTTTaGGCTCCGATGTTCTTCCCCATAGCCGTTTCACAGATTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: LILYTVRTYSESLLL*APMFFPIAVSQIIS Trigger: GGATATAATCTGTGAAACGGCTATGGGGAAGAACATCGGAGCTCAAAGCAATAATGATTCCGAGTATGTCCGTACAGTGTATAGGATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 90 bp | ATGACATTGTTGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTTGTaGTCCCGTCCTTCTTTAAACACAAGGTACCAAAGGTCAAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: MTLLVKVCRHLSPLL*SRPSLNTRYQRSNQ Trigger: TTGGTTTGACCTTTGGTACCTTGTGTTTAAAGAAGGACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTCGTTCAGCAATGACATaGTTGGTGAAAGTATGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKTSHATNAVKNDLLREVRSAMT*LVKVCR Trigger: CCTACATACTTTCACCAACAATGTCATTGCTGAACG...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGGATCAATCAGTGATCTAAAGTTTCTTCTGAAGATTAACGTCTCTTTCTTAAAGGCTTCTTGGTaGACGTGTTTTTCAAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRGSISDLKFLLKINVSFLKASW*TCFSSL Trigger: TAAGCTTGAAAAACACGTCAACCAAGAAGCCTTTAA...GAAAGAGACGTTAATCTTCAGAAGAAACTTTAGATCACTGATTGATCCTCTGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS-3UTR CAA 90 bp | ACCAAAACCAGCCACGCAACCAATGCTGTTAAAAATGATTTATTAAGAGAAGTTTCAGCAATGACATTGTaGGTGAAAGTATGTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TKTSHATNAVKNDLLREVSAMTL*VKVCRH Trigger: ATGCCTACATACTTTCACCAACAATGTCATTGCTGA...AACTTCTCTTAATAAATCATTTTTAACAGCATTGGTTGCGTGGCTGGTTTTGGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS GCA 90 bp | TCTTGGTTGACGTGTTTTTCAAGCTTATTAACCAATATATTTGCTTaGTCATTCATGACATCCAAGAAGTTCTCCAGAATGGTAAAATGG | + |
|
Preference number: 5 (lower is better) Translates to: SWLTCFSSLLTNIFA*SFMTSKKFSRMVKW Trigger: CCATTTTACCATTCTGGAGAACTTCTTGGATGTCATGAATGAGCAAGCAAATATATTGGTTAATAAGCTTGAAAAACACGTCAACCAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 72 bp | TCCCACCAAGGGGTAGGCGCGGGCCACCGACGGGATTaGCCGCATCTGCTGCCATTTCCGCGCGTAGCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SHQGVGAGHRRD*PHLLPFPRVAY Trigger: GTAAGCTACGCGCGGAAATGGCAGCAGATGCGGTCAATCCCGTCGGTGGCCCGCGCCTACCCCTTGGTGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | GTCCCACCAAGGGGTAGGCGCGGGCCACCGACGGGATaGACCGCATCTGCTGCCATTTCCGCGCGTAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VPPRGRRGPPTG*TASAAISARSL Trigger: TAAGCTACGCGCGGAAATGGCAGCAGATGCGGTCAATCCCGTCGGTGGCCCGCGCCTACCCCTTGGTGGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | AAAGCGCGTGTCCCACCAAGGGGTAGGCGCGGGCCACCGACGGGATaGACCGCATCTGCTGCCATTTCCGCGCGTAGCTTACCAGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: KARVPPRGRRGPPTG*TASAAISARSLPAS Trigger: CGATGCTGGTAAGCTACGCGCGGAAATGGCAGCAGATGCGGTCAATCCCGTCGGTGGCCCGCGCCTACCCCTTGGTGGGACACGCGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS GCA 72 bp | GATAGGACCCCTGCCAGCACCCGTCCAGTCTTCCTCTaGCTTCCTTTCTTTGACTCGTTCAGCAATGACATT | + |
|
Preference number: 6 (lower is better) Translates to: DRTPASTRPVFL*LPFFDSFSNDI Trigger: AATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAAGACTGGACGGGTGCTGGCAGGGGTCCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | GGACCCCTGCCAGCACCCGTCCAGTCTTCCTCTGCCTTCCTTTCTTaGACTCGTTCAGCAATGACATTGTTGGTGAAAGTATGTAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GPLPAPVQSSSAFLS*TRSAMTLLVKVCRH Trigger: ATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAAGACTGGACGGGTGCTGGCAGGGGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 72 bp | AATCTCCAGCCAGGCCGAGTTCTTCTCTCTTCTGGTTaGATTCTACCCAAAACTGCCTCAGGATACAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NLQPGRVLLSSG*ILPKTASGYRQ Trigger: TTGCCTGTATCCTGAGGCAGTTTTGGGTAGAATCCAACCAGAAGAGAGAAGAACTCGGCCTGGCTGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | AAATCTCCAGCCAGGCCGAGTTCTTCTCTCTTCTGGTaGGATTCTACCCAAAACTGCCTCAGGATACAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: KSPARPSSSLFW*DSTQNCLRIQA Trigger: TGCCTGTATCCTGAGGCAGTTTTGGGTAGAATCCAACCAGAAGAGAGAAGAACTCGGCCTGGCTGGAGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS GCA 72 bp | TTGCTTAGAACTGGTCAAAATCACCTCCACATTCTCTaGCTTATAAAGTGCCACCAGGGGCACGGGTCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: LLRTGQNHLHIL*LIKCHQGHGSN Trigger: ATTGGACCCGTGCCCCTGGTGGCACTTTATAAGGCAGAGAATGTGGAGGTGATTTTGACCAGTTCTAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 72 bp | ATCAAATCTCCAGCCAGGCCGAGTTCTTCTCTCTTCTaGTTGGATTCTACCCAAAACTGCCTCAGGATACAG | + |
|
Preference number: 6 (lower is better) Translates to: IKSPARPSSSLF*LDSTQNCLRIQ Trigger: CTGTATCCTGAGGCAGTTTTGGGTAGAATCCAACCAGAAGAGAGAAGAACTCGGCCTGGCTGGAGATTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | CCAGCACCCGTCCAGTCTTCCTCTGCCTTCCTTTCTTaGACTCGTTCAGCAATGACATTGTTGGTGAAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PAPVQSSSAFLS*TRSAMTLLVKV Trigger: TACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAAGACTGGACGGGTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | CTAAGAATCAAATCTCCAGCCAGGCCGAGTTCTTCTCTCTTCTGGTaGGATTCTACCCAAAACTGCCTCAGGATACAGGCAAGAATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRIKSPARPSSSLFW*DSTQNCLRIQARMV Trigger: GACCATTCTTGCCTGTATCCTGAGGCAGTTTTGGGTAGAATCCAACCAGAAGAGAGAAGAACTCGGCCTGGCTGGAGATTTGATTCTTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | CAGGATACAGGCAAGAATGGTCTTCTCCTCCATGACAGCAAACTTTaGACCAATACAGTTTCGAGGTCCAGCAGAAAATGGCACATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QDTGKNGLLLHDSKL*TNTVSRSSRKWHIG Trigger: GCCTATGTGCCATTTTCTGCTGGACCTCGAAACTGTATTGGTCAAAAGTTTGCTGTCATGGAGGAGAAGACCATTCTTGCCTGTATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 72 bp | CTTCTGGATTCGTGCCCAATAGGTATAAGGACCAGTTaGTTGCAGCAGCAGTTGTATCGTGACCCTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LLDSCPIGIRTS*LQQQLYRDPQT Trigger: TGTTTGAGGGTCACGATACAACTGCTGCTGCAATCAACTGGTCCTTATACCTATTGGGCACGAATCCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 72 bp | GCCTCAGGATACAGGCAAGAATGGTCTTCTCCTCCATaGCAGCAAACTTTTGACCAATACAGTTTCGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASGYRQEWSSPP*QQTFDQYSFEV Trigger: GACCTCGAAACTGTATTGGTCAAAAGTTTGCTGTCATGGAGGAGAAGACCATTCTTGCCTGTATCCTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS GCA 72 bp | GGTCAAAATCACCTCCACATTCTCTGCCTTATAAAGTaGCACCAGGGGCACGGGTCCAATCCAAAGTTTAAT | + |
|
Preference number: 6 (lower is better) Translates to: GQNHLHILCLIK*HQGHGSNPKFN Trigger: ATTAAACTTTGGATTGGACCCGTGCCCCTGGTGGCACTTTATAAGGCAGAGAATGTGGAGGTGATTTTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 72 bp | ATGTCTCCTCTTCAGCTTGATCCAGATGCCATTATTTaGCCTAAGAATCAAATCTCCAGCCAGGCCGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: MSPLQLDPDAII*PKNQISSQAEF Trigger: GAACTCGGCCTGGCTGGAGATTTGATTCTTAGGCCAAATAATGGCATCTGGATCAAGCTGAAGAGGAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | TCTTCCTCTGCCTTCCTTTCTTTGACTCGTTCAGCAATGACATTGTaGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTTGTGGTCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSAFLSLTRSAMTL*VKVCRHLSPLLWSR Trigger: ACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | CAGTCTTCCTCTGCCTTCCTTTCTTTGACTCGTTCAGCAATGACATaGTTGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTTGTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSSAFLSLTRSAMT*LVKVCRHLSPLLWS Trigger: GGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGAGGAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 72 bp | TACACTGTACGGACATACTCGGAATCATTATTGCTTTaGGCTCCGATGTTCTTCCCCATAGCCGTTTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: YTVRTYSESLLL*APMFFPIAVSQ Trigger: CTGTGAAACGGCTATGGGGAAGAACATCGGAGCTCAAAGCAATAATGATTCCGAGTATGTCCGTACAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS TCA 72 bp | GCAAGAATGGTCTTCTCCTCCATGACAGCAAACTTTTaGCCAATACAGTTTCGAGGTCCAGCAGAAAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARMVFSSMTANF*PIQFRGPAENG Trigger: GCCATTTTCTGCTGGACCTCGAAACTGTATTGGTCAAAAGTTTGCTGTCATGGAGGAGAAGACCATTCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | GGCAAGAATGGTCTTCTCCTCCATGACAGCAAACTTTaGACCAATACAGTTTCGAGGTCCAGCAGAAAATGG | + |
|
Preference number: 6 (lower is better) Translates to: GKNGLLLHDSKL*TNTVSRSSRKW Trigger: CCATTTTCTGCTGGACCTCGAAACTGTATTGGTCAAAAGTTTGCTGTCATGGAGGAGAAGACCATTCTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CCA 72 bp | TTGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTTGTaGTCCCGTCCTTCTTTAAACACAAGGTACCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LVKVCRHLSPLL*SRPSLNTRYQR Trigger: CCTTTGGTACCTTGTGTTTAAAGAAGGACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | GCAATGACATTGTTGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTaGTGGTCCCGTCCTTCTTTAAACACAAGGTACCAAAGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: AMTLLVKVCRHLSPL*WSRPSLNTRYQRSN Trigger: GTTTGACCTTTGGTACCTTGTGTTTAAAGAAGGACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | TTGACTCGTTCAGCAATGACATTGTTGGTGAAAGTATGTAGGCATTaGAGTCCCCTTTTGTGGTCCCGTCCTTCTTTAAACACAAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: LTRSAMTLLVKVCRH*SPLLWSRPSLNTRY Trigger: GTACCTTGTGTTTAAAGAAGGACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | TTGTTGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTaGTGGTCCCGTCCTTCTTTAAACACAAGGTACCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLVKVCRHLSPL*WSRPSLNTRYQ Trigger: TTGGTACCTTGTGTTTAAAGAAGGACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | TCAGCAATGACATTGTTGGTGAAAGTATGTAGGCATTaGAGTCCCCTTTTGTGGTCCCGTCCTTCTTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SAMTLLVKVCRH*SPLLWSRPSLN Trigger: GTTTAAAGAAGGACGGGACCACAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | GCCTTCCTTTCTTTGACTCGTTCAGCAATGACATTGTaGGTGAAAGTATGTAGGCATTTGAGTCCCCTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: AFLSLTRSAMTL*VKVCRHLSPLL Trigger: CAAAAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 72 bp | TCTGCCTTCCTTTCTTTGACTCGTTCAGCAATGACATaGTTGGTGAAAGTATGTAGGCATTTGAGTCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SAFLSLTRSAMT*LVKVCRHLSPL Trigger: AAGGGGACTCAAATGCCTACATACTTTCACCAACAATGTCATTGCTGAACGAGTCAAAGAAAGGAAGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | ACTCATCCTATACACTGTACGGACATACTCGGAATCATTATTGCTTaGAGCTCCGATGTTCTTCCCCATAGCCGTTTCACAGATTATATC | + |
|
Preference number: 6 (lower is better) Translates to: THPIHCTDILGIIIA*SSDVLPHSRFTDYI Trigger: GATATAATCTGTGAAACGGCTATGGGGAAGAACATCGGAGCTCAAAGCAATAATGATTCCGAGTATGTCCGTACAGTGTATAGGATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||
| CDS CAA 90 bp | CCCGTACTTGTAAGAAGTCCTAGTCCCAGCCATGGCTGTAGGAACTaGTACAAAAACGATTTATCAATTTGCTTAGAACTGGTCAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PVLVRSPSPSHGCRN*YKNDLSICLELVKI Trigger: GATTTTGACCAGTTCTAAGCAAATTGATAAATCGTTTTTGTACAAGTTCCTACAGCCATGGCTGGGACTAGGACTTCTTACAAGTACGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095328.6 |
||