Pregenerated sensors for CYP4F40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090700Ensembl transcript IDs: ENSMUST00000165061.2, ENSMUST00000235086.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGACTCCATAACTCTGACCACTGGGAGGATCCTTAGCAGCCCCTaGTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGA | + |
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Preference number: 1 (lower is better) Translates to: LDSITLTTGRILSSP*LPGDSTVCALQSSR Trigger: TCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCTGCTAAGGATCCTCCCAGTGGTCAGAGTTATGGAGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| 3UTR CAA 90 bp | GACTCCATAACTCTGACCACTGGGAGGATCCTTAGCAGCCCCTGCTaGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DSITLTTGRILSSPC*PGDSTVCALQSSRA Trigger: TGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCTGCTAAGGATCCTCCCAGTGGTCAGAGTTATGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCAAAGAGCATGAAAGAACCATGTGTCATAAATTAGGAGCTGTTGGGCCTGAAGTCAGGGATCTTTaGTTCAAATCAACTAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: GGKEHERTMCHKLGAVGPEVRDL*FKSTSW Trigger: CCAGCTAGTTGATTTGAACCAAAGATCCCTGACTTC...AGGCCCAACAGCTCCTAATTTATGACACATGGTTCTTTCATGCTCTTTGCCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235086.2 |
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| 3UTR-3UTR GCA 90 bp | TTTGGTGGCAAAGAGCATGAAAGAACCATGTGTCATAAATTAGGAGCTGTTGGGGCACTGTTTGTGCTTTaGAATCTTCAAGAGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: FGGKEHERTMCHKLGAVGALFVL*NLQEQS Trigger: ACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGC...CCCAACAGCTCCTAATTTATGACACATGGTTCTTTCATGCTCTTTGCCACCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235086.2 |
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| 3UTR GCA 72 bp | ATAACTCTGACCACTGGGAGGATCCTTAGCAGCCCCTaGTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: ITLTTGRILSSP*LPGDSTVCALQ Trigger: TTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCTGCTAAGGATCCTCCCAGTGGTCAGAGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| 3UTR-3UTR CAA 90 bp | GACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATCAACTAGCTGGACTCCATAGCACTGTTTGTGCTTaGCAATCTTCAAGAGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: DHPEKSGIFGSNQLAGLHSTVCA*QSSRAE Trigger: CTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCT...ATGGAGTCCAGCTAGTTGATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | CTGGACTCCATAACTCTGACCACTGGGAGGATCCTTAGCAGCCCCTGCTTGCCGCTCTGGCTTCCGGCGTaGCTCCTTGTCATCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LDSITLTTGRILSSPCLPLWLPA*LLVIWQ Trigger: CTGCCAGATGACAAGGAGCCACGCCGGAAGCCAGAG...CGGCAAGCAGGGGCTGCTAAGGATCCTCCCAGTGGTCAGAGTTATGGAGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCTGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGGAGACCATTGTGACTaGGGGATGCAGCCGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: SPCLPGDSTVCALQSSRAGDHCD*GMQPQT Trigger: AGTCTGCGGCTGCATCCCCCAGTCACAATGGTCTCC...TGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | CCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCACGCCTACTCTGGCTTCCGGCGTaGCTCCTTGTCATCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PGDSTVCALQSSRAESRLLWLPA*LLVIWQ Trigger: CTGCCAGATGACAAGGAGCCACGCCGGAAGCCAGAG...TAGGCGTGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | TGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCAGCGCAGGATCAGCTCTaGCTTCCGGCGTGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CLPGDSTVCALQSSRAESAQDQL*LPAWLL Trigger: AAGGAGCCACGCCGGAAGCCAGAGCTGATCCTGCGC...TGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | ATCTTCAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGCAAAGTGGGGCAACCGCAGCTaGGGCGCTGAGGACAGATCG | + |
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Preference number: 4 (lower is better) Translates to: IFKSRVTPIYLLRKARAKWGNRS*GAEDRS Trigger: CGATCTGTCCTCAGCGCCTCAGCTGCGGTTGCCCCA...CTTTGCCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTGAAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | AAATCTGAACAAAGGAAAATATCTCACGTCTGCATATTTCCAGGGGGTGACGGGTGGGGCAACCGCAGCTaGGGCGCTGAGGACAGATCG | + |
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Preference number: 4 (lower is better) Translates to: KSEQRKISHVCIFPGGDGWGNRS*GAEDRS Trigger: CGATCTGTCCTCAGCGCCTCAGCTGCGGTTGCCCCA...CCCGTCACCCCCTGGAAATATGCAGACGTGAGATATTTTCCTTTGTTCAGATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | AGCAGCCCCTGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGATGGCTAGGCTTCTCCTaGCAGTTGCTGTTGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SSPCLPGDSTVCALQSSRWLGFS*QLLLKL Trigger: CAGCTTCAACAGCAACTGTCAGGAGAAGCCTAGCCA...TCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | GCCCCTGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGGATGATCCTTCCATCTaGGAGGGAAATGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: APACRVTALFVLCNLQEQDDPSI*EGNVLG Trigger: ACCCAGGACATTTCCCTCCCAGATGGAAGGATCATC...CTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | AGAACCATGTGTCATAAATTAGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTGCGCAGGATCAGCTCTaGCTTCCGGCGTGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RTMCHKLGAVGPVTIQRSAQDQL*LPAWLL Trigger: AAGGAGCCACGCCGGAAGCCAGAGCTGATCCTGCGC...ACTTCTCTGGATGGTCACAGGCCCAACAGCTCCTAATTTATGACACATGGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | TGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATCAACTAGCTGGACTCGGCCTAACCAGGTCATaGAGCCCTGGGGATAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CDHPEKSGIFGSNQLAGLGLTRS*SPGDRW Trigger: CCACCTATCCCCAGGGCTTCATGACCTGGTTAGGCC...GAGTCCAGCTAGTTGATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR GCA 90 bp | AGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATTGTCATCTGGCAGGATaGGGAAGCGCAGCAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RSCWACDHPEKSGIFGSNCHLAG*GSAAES Trigger: TGACTCTGCTGCGCTTCCGCATCCTGCCAGATGACA...ATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACAGGCCCAACAGCTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | AGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGCAAAGTAGATGGGGAGACCATTGTGACTaGGGGATGCAGCCGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: RAESRLFTYYGKPGQSRWGDHCD*GMQPQT Trigger: AGTCTGCGGCTGCATCCCCCAGTCACAATGGTCTCC...CCATCTACTTTGCCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCTGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGATGATCCTTCCATCTaGGAGGGAAATGTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SPCLPGDSTVCALQSSRADDPSI*EGNVLG Trigger: ACCCAGGACATTTCCCTCCCAGATGGAAGGATCATC...TGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | CTGGACTCCATAACTCTGACCACTGGGAGGATCCTTAGCAGCCCCTGCTTGCCGAGAGGTGATCTAGCCTaGATGTTCTCTGGATCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LDSITLTTGRILSSPCLPRGDLA*MFSGSK Trigger: TTTTGATCCAGAGAACATCCAGGCTAGATCACCTCT...CGGCAAGCAGGGGCTGCTAAGGATCCTCCCAGTGGTCAGAGTTATGGAGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | TGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCATTCTTCTTGGGTGGCTaGGGGAAACCACAGAGACGT | + |
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Preference number: 4 (lower is better) Translates to: CLPGDSTVCALQSSRAESFFLGG*GKPQRR Trigger: ACGTCTCTGTGGTTTCCCTCAGCCACCCAAGAAGAA...TGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | GCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATCAACTGGCTAGGCTTCTCCTaGCAGTTGCTGTTGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AVGPVTIQRSQGSLVQINWLGFS*QLLLKL Trigger: CAGCTTCAACAGCAACTGTCAGGAGAAGCCTAGCCA...GTTGATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACAGGCCCAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | ATCTTCAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGCAAAGAGCCCTGGGGATAGGTaGTCACCAGCTCAGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: IFKSRVTPIYLLRKARAKSPGDR*SPAQSP Trigger: AGGTGACTGAGCTGGTGACCACCTATCCCCAGGGCT...CTTTGCCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | GCCCCTGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAAACCACAGAGACGTTaGCACTTTGCATACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: APACRVTALFVLCNLQEQKPQRR*HFAYKV Trigger: CACTTTGTATGCAAAGTGTCAACGTCTCTGTGGTTT...CTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | AGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGCAAAGTAGATGGTTCTTCTTGGGTGGCTaGGGGAAACCACAGAGACGT | + |
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Preference number: 4 (lower is better) Translates to: RAESRLFTYYGKPGQSRWFFLGG*GKPQRR Trigger: ACGTCTCTGTGGTTTCCCTCAGCCACCCAAGAAGAA...CCATCTACTTTGCCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR GCA 90 bp | TTGCAATCTTCAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGGGGAAATGTCCTGGGTaGAGCATCGGGAGACCATTG | + |
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Preference number: 4 (lower is better) Translates to: LQSSRAESRLFTYYGKPGGKCPG*SIGRPL Trigger: CAATGGTCTCCCGATGCTGCACCCAGGACATTTCCC...CCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTGAAGATTGCAA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR GCA 90 bp | GACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATCAACTAGCTGGACTCCATGGGAAATGTCCTGGGTaGAGCATCGGGAGACCATTG | + |
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Preference number: 4 (lower is better) Translates to: DHPEKSGIFGSNQLAGLHGKCPG*SIGRPL Trigger: CAATGGTCTCCCGATGCTGCACCCAGGACATTTCCC...ATGGAGTCCAGCTAGTTGATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR GCA 90 bp | TGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATCAACTAGCTGGACTCTGTCATCTGGCAGGATaGGGAAGCGCAGCAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: CDHPEKSGIFGSNQLAGLCHLAG*GSAAES Trigger: TGACTCTGCTGCGCTTCCGCATCCTGCCAGATGACA...GAGTCCAGCTAGTTGATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | TGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCACCAATTCTTCTTGGGTaGCTGAGGGAAACCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: CLPGDSTVCALQSSRAESPILLG*LRETTE Trigger: CTCTGTGGTTTCCCTCAGCCACCCAAGAAGAATTGG...TGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | TGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCACGCCAAAACCAATTCTTCTTaGGTGGCTGAGGGAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: CRVTALFVLCNLQEQSHAKTNSS*VAEGNH Trigger: GTGGTTTCCCTCAGCCACCCAAGAAGAATTGGTTTT...GGCGTGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | GGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCACGCCTATTTCCAATTCTTCTTGGGTaGCTGAGGGAAACCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: GDSTVCALQSSRAESRLFPILLG*LRETTE Trigger: CTCTGTGGTTTCCCTCAGCCACCCAAGAAGAATTGG...AAATAGGCGTGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | TTAGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAAAAACCAATTCTTCTTaGGTGGCTGAGGGAAACCAC | + |
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Preference number: 4 (lower is better) Translates to: LGAVGPVTIQRSQGSLVQKTNSS*VAEGNH Trigger: GTGGTTTCCCTCAGCCACCCAAGAAGAATTGGTTTT...TTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACAGGCCCAACAGCTCCTAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | GACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATCAACTAGCTGGACTCCATCGGATGATATCAGGGTaGCACAGAGTGATGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: DHPEKSGIFGSNQLAGLHRMISG*HRVMRG Trigger: TCCTCTCATCACTCTGTGCCACCCTGATATCATCCG...ATGGAGTCCAGCTAGTTGATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | TTTGCAATCTTCAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGCGGATGATATCAGGGTaGCACAGAGTGATGAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: FAIFKSRVTPIYLLRKARRMISG*HRVMRG Trigger: TCCTCTCATCACTCTGTGCCACCCTGATATCATCCG...CCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTGAAGATTGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | AGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATTTCCATCTTCATCCTTaGTTAGCAGCAGTACATCAA | + |
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Preference number: 4 (lower is better) Translates to: RSCWACDHPEKSGIFGSNFHLHP*LAAVHQ Trigger: TTGATGTACTGCTGCTAACCAAGGATGAAGATGGAA...ATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACAGGCCCAACAGCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR TCA 90 bp | TTGCAATCTTCAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGAAACCACAGAGACGTTaGCACTTTGCATACAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: LQSSRAESRLFTYYGKPGKPQRR*HFAYKV Trigger: CACTTTGTATGCAAAGTGTCAACGTCTCTGTGGTTT...CCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTGAAGATTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | CAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGCAAAGTAGATAGAGGTGATCTAGCCTaGATGTTCTCTGGATCAAAA | + |
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Preference number: 4 (lower is better) Translates to: QEQSHAYLLTTESQGKVDRGDLA*MFSGSK Trigger: TTTTGATCCAGAGAACATCCAGGCTAGATCACCTCT...ATCTACTTTGCCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CCA 90 bp | GGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCACGCCTATTTTTCCATCTTCATCCTTaGTTAGCAGCAGTACATCAA | + |
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Preference number: 4 (lower is better) Translates to: GDSTVCALQSSRAESRLFFHLHP*LAAVHQ Trigger: TTGATGTACTGCTGCTAACCAAGGATGAAGATGGAA...AAATAGGCGTGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | AGCCCCTGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGCCAGGCGCAGCCACTaGGCATGCATGATGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SPCLPGDSTVCALQSSRAARRSH*ACMMLV Trigger: CACCAACATCATGCATGCCAAGTGGCTGCGCCTGGC...TGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCAGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS CCA 90 bp | GCAACCGCAGCTGAGGCGCTGAGGACAGATCGGATGATATCAGGGTaGCACAGAGTGATGAGAGGAACTATAGGGCCTAACCAGGTCATG | + |
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Preference number: 5 (lower is better) Translates to: ATAAEALRTDRMISG*HRVMRGTIGPNQVM Trigger: CATGACCTGGTTAGGCCCTATAGTTCCTCTCATCACTCTGTGCCACCCTGATATCATCCGATCTGTCCTCAGCGCCTCAGCTGCGGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGGGATCTTTGGTTCAAATTTCCGGCGTGGCTCCTaGTCATCTGGCAGGATGCGG | + |
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Preference number: 5 (lower is better) Translates to: RSCWACDHPEKSGIFGSNFRRGS*SSGRMR Trigger: CCGCATCCTGCCAGATGACAAGGAGCCACGCCGGAA...ATTTGAACCAAAGATCCCTGACTTCTCTGGATGGTCACAGGCCCAACAGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | ACCATGTGTCATAAATTAGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGTTCCGGCGTGGCTCCTaGTCATCTGGCAGGATGCGG | + |
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Preference number: 5 (lower is better) Translates to: TMCHKLGAVGPVTIQRSQFRRGS*SSGRMR Trigger: CCGCATCCTGCCAGATGACAAGGAGCCACGCCGGAA...CTGACTTCTCTGGATGGTCACAGGCCCAACAGCTCCTAATTTATGACACATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | AGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGCAAAGTAGATGGGCCAGGCGCAGCCACTaGGCATGCATGATGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RAESRLFTYYGKPGQSRWARRSH*ACMMLV Trigger: CACCAACATCATGCATGCCAAGTGGCTGCGCCTGGC...CCATCTACTTTGCCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | TGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCACGCCGACTTGGCTTTGGCCTaGATGATATCATCACCACCA | + |
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Preference number: 5 (lower is better) Translates to: CRVTALFVLCNLQEQSHADLALA*MISSPP Trigger: TGGTGGTGATGATATCATCAAGGCCAAAGCCAAGTC...GGCGTGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | CTGGACTCCATAACTCTGACCACTGGGAGGATCCTTAGCAGCCCCTGCTTGCCGTGGGTTCCAAAAATATaGATGATGCAGATGACACCT | + |
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Preference number: 5 (lower is better) Translates to: LDSITLTTGRILSSPCLPWVPKI*MMQMTP Trigger: AGGTGTCATCTGCATCATCAATATTTTTGGAACCCA...CGGCAAGCAGGGGCTGCTAAGGATCCTCCCAGTGGTCAGAGTTATGGAGTCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | TGCTTGCCGGGTGACAGCACTGTTTGTGCTTTGCAATCTTCAAGAGCAGAGTCATTGGCATGCATGATGTaGGTGCTGTCATTGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: CLPGDSTVCALQSSRAESLACMM*VLSLKI Trigger: GATTTTCAATGACAGCACCAACATCATGCATGCCAA...TGACTCTGCTCTTGAAGATTGCAAAGCACAAACAGTGCTGTCACCCGGCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | ACCATGTGTCATAAATTAGGAGCTGTTGGGCCTGTGACCATCCAGAGAAGTCAGTTGGCATGCATGATGTaGGTGCTGTCATTGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: TMCHKLGAVGPVTIQRSQLACMM*VLSLKI Trigger: GATTTTCAATGACAGCACCAACATCATGCATGCCAA...CTGACTTCTCTGGATGGTCACAGGCCCAACAGCTCCTAATTTATGACACATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235086.2 |
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| CDS-3UTR CAA 90 bp | TTGCAATCTTCAAGAGCAGAGTCACGCCTATTTACTTACTACGGAAAGCCAGGGTGGGTTCCAAAAATATaGATGATGCAGATGACACCT | + |
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Preference number: 5 (lower is better) Translates to: LQSSRAESRLFTYYGKPGWVPKI*MMQMTP Trigger: AGGTGTCATCTGCATCATCAATATTTTTGGAACCCA...CCCTGGCTTTCCGTAGTAAGTAAATAGGCGTGACTCTGCTCTTGAAGATTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS CCA 72 bp | GCTGAGGCGCTGAGGACAGATCGGATGATATCAGGGTaGCACAGAGTGATGAGAGGAACTATAGGGCCTAAC | + |
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Preference number: 6 (lower is better) Translates to: AEALRTDRMISG*HRVMRGTIGPN Trigger: GTTAGGCCCTATAGTTCCTCTCATCACTCTGTGCCACCCTGATATCATCCGATCTGTCCTCAGCGCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS CCA 72 bp | CAACCAAGAAAAAGAGTAGCCACGGTGAGGCTGACATaGGCCCCAGTCCTAGCCAGGATAAGTCCAGATATC | + |
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Preference number: 6 (lower is better) Translates to: QPRKRVATVRLT*APVLARISPDI Trigger: GATATCTGGACTTATCCTGGCTAGGACTGGGGCCCATGTCAGCCTCACCGTGGCTACTCTTTTTCTTGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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| CDS TCA 72 bp | GACGTTGACACTTTGCATACAAAGTGTATAGCTGCGTaGGGAACCGGGCCAAGAACCAGGAAATCCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: DVDTLHTKCIAA*GTGPRTRKSQP Trigger: TGGTTGGGATTTCCTGGTTCTTGGCCCGGTTCCTCACGCAGCTATACACTTTGTATGCAAAGTGTCAACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165061.2 ENSMUST00000235086.2 |
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