Pregenerated sensors for CYP4F39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061126Ensembl transcript IDs: ENSMUST00000003413.7, ENSMUST00000236307.2, ENSMUST00000237491.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTGGGCATAGGCAGAGGGAAAGCCAGAGGATACAACCCCAGTGGTaGGTCTTAGGTCCAAGTTTCTGTGAGCTGGGCCTAGGAATCAGA | + |
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Preference number: 1 (lower is better) Translates to: LGHRQRESQRIQPQW*VLGPSFCELGLGIR Trigger: TCTGATTCCTAGGCCCAGCTCACAGAAACTTGGACCTAAGACTCACCACTGGGGTTGTATCCTCTGGCTTTCCCTCTGCCTATGCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR TCA 90 bp | CGACCTCAGAGGGTGGAATCAAATCCCAAGGGTGGAGTCTTGTCCTaGGGGGCGAAGTCAGCACCAACAAGATACTCCTCTACAAACAAA | + |
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Preference number: 1 (lower is better) Translates to: RPQRVESNPKGGVLS*GAKSAPTRYSSTNK Trigger: TTTGTTTGTAGAGGAGTATCTTGTTGGTGCTGACTTCGCCCCTCAGGACAAGACTCCACCCTTGGGATTTGATTCCACCCTCTGAGGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR CAA 90 bp | TGTCCTCCAGTACTTTCGAGGAGCGTAGTCAACGCCCTCAATATCTaGGGGGCGGATCCATGCTATTGGAGGCGTGATCTAGGCCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: CPPVLSRSVVNALNI*GADPCYWRRDLGLS Trigger: GCTCAGGCCTAGATCACGCCTCCAATAGCATGGATCCGCCCCCAAGATATTGAGGGCGTTGACTACGCTCCTCGAAAGTACTGGAGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTGGTGGAGTCTTGTCCTaGGGGGCGAAGTCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: WVLGKDVEDSGLQPQTPAGGVLS*GAKSAP Trigger: TGGTGCTGACTTCGCCCCTCAGGACAAGACTCCACC...AGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR TCA 72 bp | GGCCTAGGAATCAGAATCCGCAGGGCCAGGGTAATCTaGCTGGGGCGTGGCCTAGGCCCGAGTGGGGCGTGG | + |
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Preference number: 3 (lower is better) Translates to: GLGIRIRRARVI*LGRGLGPSGAW Trigger: CCACGCCCCACTCGGGCCTAGGCCACGCCCCAGTCAGATTACCCTGGCCCTGCGGATTCTGATTCCTAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR GCA 72 bp | GTAGTCAACGCCCTCAATATCTTGGGGGCGGATCCATaGTATTGGAGGCGTGATCTAGGCCTGAGCGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: VVNALNILGADP*YWRRDLGLSGR Trigger: CCGCCCGCTCAGGCCTAGATCACGCCTCCAATAGCATGGATCCGCCCCCAAGATATTGAGGGCGTTGACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR CCA 72 bp | ATTTCGACCTCAGAGGGTGGAATCAAATCCCAAGGGTaGAGTCTTGTCCTGAGGGGCGAAGTCAGCACCAAC | + |
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Preference number: 3 (lower is better) Translates to: ISTSEGGIKSQG*SLVLRGEVSTN Trigger: GTTGGTGCTGACTTCGCCCCTCAGGACAAGACTCCACCCTTGGGATTTGATTCCACCCTCTGAGGTCGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR GCA 72 bp | TGTGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTaGAACCTCAGACTCCGGCTTCTAAATCCTCCATTT | + |
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Preference number: 3 (lower is better) Translates to: CGSWERMLKIQD*NLRLRLLNPPF Trigger: AAATGGAGGATTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR CCA 72 bp | AATCCTGAGAGCTTGAACTGTCCTTTCATGGAGCTGTaGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: NPESLNCPFMEL*VLGKDVEDSGL Trigger: CAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTCAGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAATCTACAAACAAAGCTTaGTCCTCCAGTACTTTCGAG | + |
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Preference number: 3 (lower is better) Translates to: LGKDVEDSGLQPQTPASKSTNKA*SSSTFE Trigger: CTCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGA...TTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR CCA 72 bp | GCTCCAAATCTAGGACCGGATGAGATGGACGGTGTTTaGATCCTCTTGCTTTTACTCTCACTCTTAAAATTG | + |
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Preference number: 3 (lower is better) Translates to: APNLGPDEMDGV*ILLLLLSLLKL Trigger: CAATTTTAAGAGTGAGAGTAAAAGCAAGAGGATCCAAACACCGTCCATCTCATCCGGTCCTAGATTTGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR TCA 72 bp | AGGTTTACAAAACAACAAAGCAAACAGCCTAAATCCTaGGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: RFTKQQSKQPKS*ELELSFHGAVG Trigger: ACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTCAGGATTTAGGCTGTTTGCTTTGTTGTTTTGTAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | GCTAACTTGGGCATAGGCAGAGGGAAAGCCAGAGGATACAACCCCAGTGGTGAGGCGGCCTGGAGGCTCTaGGAAGCAGCTCAGCTTGCG | + |
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Preference number: 4 (lower is better) Translates to: ANLGIGRGKARGYNPSGEAAWRL*EAAQLA Trigger: CGCAAGCTGAGCTGCTTCCCAGAGCCTCCAGGCCGC...CTCACCACTGGGGTTGTATCCTCTGGCTTTCCCTCTGCCTATGCCCAAGTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | GCTAACTTGGGCATAGGCAGAGGGAAAGCCAGAGGATACAACCCCAGTGGTGAGCAGCCAGTGGCGGCCTaGAGGCTCTGGGAAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ANLGIGRGKARGYNPSGEQPVAA*RLWEAA Trigger: AGCTGCTTCCCAGAGCCTCCAGGCCGCCACTGGCTG...CTCACCACTGGGGTTGTATCCTCTGGCTTTCCCTCTGCCTATGCCCAAGTTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | GCTAACTTGGGCATAGGCAGAGGGAAAGCCAGAGGATACAACCCCAGTGGTGAGGTCCATCTGGCAGCTTaGTGTCCTCTGTGCAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: ANLGIGRGKARGYNPSGEVHLAA*CPLCSD Trigger: GTCGCTGCACAGAGGACATCAAGCTGCCAGATGGAC...CTCACCACTGGGGTTGTATCCTCTGGCTTTCCCTCTGCCTATGCCCAAGTTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | CAAGAAGGAAGGGGCTTGCAAGGGCCCAGGTTTACAAAACAACAAAGCAAACAGGTGAGCAGGCGGCGGTaGCGGCTCCATTTGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: QEGRGLQGPRFTKQQSKQVSRRR*RLHLFP Trigger: AGGGAACAAATGGAGCCGGCACCGCCGCCTGCTCAC...CTGTTTGCTTTGTTGTTTTGTAAACCTGGGCCCTTGCAAGCCCCTTCCTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | TTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAAGCCAGTGGAGAGCGCTaGTGTGGGGTGTCCGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LGKDVEDSGLQPQTPASKASGER*CGVSGS Trigger: TGACCCGGACACCCCACAGCAGCGCTCTCCACTGGC...TTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | AGCTGTGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCAGGTCTTGCCCTGCTTaGCTTTCAGCCATGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SCGSWERMLKIQDCNLRLRSCPA*LSAMPR Trigger: CCGAGGCATGGCTGAAAGCCAAGCAGGGCAAGACCT...GAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | GGCGAAGTCAGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGTGGAGAGCGCTGCTGTaGGGTGTCCGGGTCAAAACG | + |
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Preference number: 4 (lower is better) Translates to: GEVSTNKILLYKQSFVLQWRALL*GVRVKT Trigger: CGTTTTGACCCGGACACCCCACAGCAGCGCTCTCCA...CTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCTGACTTCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | TGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAATGGGTGCAATGGCAGCTaGGGCACCCAACACAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: WERMLKIQDCNLRLRLLNGCNGS*GTQHRL Trigger: AAGCCTGTGTTGGGTGCCTCAGCTGCCATTGCACCC...ATTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | CCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAAGTCAAAGGAGGTCACTaGGCCCTCTGCCAGATGTCG | + |
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Preference number: 4 (lower is better) Translates to: PFMELWVLGKDVEDSGLQVKGGH*ALCQMS Trigger: CGACATCTGGCAGAGGGCTCAGTGACCTCCTTTGAC...TTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | TGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTGCTCTCTGCCTTTCATaGCTTCTTGGATCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: WVLGKDVEDSGLQPQTPAALCLS*LLGSPP Trigger: GGGAGGAGATCCAAGAAGTCATGAAAGGCAGAGAGC...AGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | GAGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGACTACACGCATCTCTaGCATGGCGAAGCTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: ESLNCPFMELWVLGKDVEDYTHL*HGEALP Trigger: GGGCAGAGCTTCGCCATGGCAGAGATGCGTGTAGTC...TTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | AGCTGTGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCATGCCAGGATGATGTaGTGCATGGTGTCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SCGSWERMLKIQDCNLRLHARMM*CMVSST Trigger: GGTGCTGGACACCATGCACCACATCATCCTGGCATG...GAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | GGCGAAGTCAGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGGATGAGGGTCACAGGTaGGAACTGGCGAAGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: GEVSTNKILLYKQSFVLQDEGHR*ELAKAL Trigger: GAGAGCCTTCGCCAGTTCCCACCTGTGACCCTCATC...CTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCTGACTTCGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAAGTCAGGCCACACTATaGGGTTGTGGTGGGTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: ESLNCPFMELWVLGKDVESQATL*GCGGSR Trigger: ACGGGACCCACCACAACCCCATAGTGTGGCCTGACT...TTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAATTTCCTCCGCACCTTGTaGGTTCGGTCCACGCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: WERMLKIQDCNLRLRLLNFLRTL*VRSTLR Trigger: CCTGAGCGTGGACCGAACCCACAAGGTGCGGAGGAA...ATTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | TCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGAGGAGCGTAGTCAACGCCCTCAACCCATGCCAGGATaGTGTGGTGCATGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: STNKALSSSTFEERSQRPQPMPG*CGAWCP Trigger: TGGACACCATGCACCACATCATCCTGGCATGGGTTG...AGGGCGTTGACTACGCTCCTCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | CCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAAGATACTTTGCCAGGTTaGACAGTGCCCAGGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: PFMELWVLGKDVEDSGLQDTLPG*TVPRTA Trigger: GGCTGTCCTGGGCACTGTTCAACCTGGCAAAGTATC...TTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACATCCTTGGGTGCAATaGCAGCTGAGGCACCCAACA | + |
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Preference number: 4 (lower is better) Translates to: PFMELWVLGKDVEDSGLQHPWVQ*QLRHPT Trigger: TGTTGGGTGCCTCAGCTGCCATTGCACCCAAGGATG...TTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR CAA 72 bp | GTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTaGAAGATTCAGGACTGCAACCTCAGACTCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VLSWSCGSWERM*KIQDCNLRLRL Trigger: AAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | TGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAATGCCAGGATGATGTGGTaGATGGTGTCCAGCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: WERMLKIQDCNLRLRLLNARMMW*MVSSTF Trigger: GAAGGTGCTGGACACCATGCACCACATCATCCTGGC...ATTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | GAGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAATCCCGGCACTTCTCCTaGTACTCTGGATACTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: ESLNCPFMELWVLGKDVESRHFS*YSGYFA Trigger: GGCAAAGTATCCAGAGTACCAGGAGAAGTGCCGGGA...TTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | AGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGAAGATACATGCTCATGTaGCCCAGCAGCCAGTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: STNKILLYKQSFVLQYFRRYMLM*PSSQWR Trigger: CCGCCACTGGCTGCTGGGTCACATGAGCATGTATCT...TCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | TGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTGTTCGTGCACTGGTTaGAAATCTTCATGTAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: WVLGKDVEDSGLQPQTPACSCTG*KSSCRA Trigger: AGCCCTACATGAAGATTTTCAACCAGTGCACGAACA...AGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | TCCTCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGAGGAGCGTAGTCAACGCGCAACAGCACATCTATaGAGTCCAAGGTCTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SSTNKALSSSTFEERSQRATAHL*SPRSCP Trigger: AGGGCAAGACCTTGGACTTCATAGATGTGCTGTTGC...GCGTTGACTACGCTCCTCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | TCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGAGGAGCGTAGTCAACGCCCTGAAAGGTCCAACCCATaGCAGGATGATGTGGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: STNKALSSSTFEERSQRPERSNP*QDDVVH Trigger: ATGCACCACATCATCCTGGCATGGGTTGGACCTTTC...AGGGCGTTGACTACGCTCCTCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | TCCTCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGAGGAGCGTAGTCAACGCTCCCCTCTTCATCCTTaGCCAGCAACAGCACATCTA | + |
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Preference number: 4 (lower is better) Translates to: SSTNKALSSSTFEERSQRSPLHP*PATAHL Trigger: TAGATGTGCTGTTGCTGGCCAAGGATGAAGAGGGGA...GCGTTGACTACGCTCCTCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | CAAGAAGGAAGGGGCTTGCAAGGGCCCAGGTTTACAAAACAACAAAGCAAACAGGATGACACGTCCATCTaGCAGCTTGATGTCCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: QEGRGLQGPRFTKQQSKQDDTSI*QLDVLC Trigger: ACAGAGGACATCAAGCTGCCAGATGGACGTGTCATC...CTGTTTGCTTTGTTGTTTTGTAAACCTGGGCCCTTGCAAGCCCCTTCCTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | TGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAATGCCCGATGCAATTCCTaGGACCTGCTGAGAAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: WERMLKIQDCNLRLRLLNARCNS*DLLRKV Trigger: TACCTTTCTCAGCAGGTCCCAGGAATTGCATCGGGC...ATTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | ACTCTCACTCTTAAAATTGAGAAAACTCAGCAAAGGGACGGTGACCAAGAAGGATCCAAGGTCTTGCCCTaGTTGGCTTTCAGCCATGCC | + |
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Preference number: 4 (lower is better) Translates to: TLTLKIEKTQQRDGDQEGSKVLP*LAFSHA Trigger: GGCATGGCTGAAAGCCAAGCAGGGCAAGACCTTGGA...TCCTTCTTGGTCACCGTCCCTTTGCTGAGTTTTCTCAATTTTAAGAGTGAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR GCA 90 bp | GAGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGTACTCTGGATACTTTaGCAGGTTGAACAGTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: ESLNCPFMELWVLGKDVEVLWIL*QVEQCP Trigger: TGGGCACTGTTCAACCTGGCAAAGTATCCAGAGTAC...TTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | TTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAACCTTTCATGACTTCTTaGATCTCCTCCCGGCACTTC | + |
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Preference number: 4 (lower is better) Translates to: LGKDVEDSGLQPQTPASKPFMTS*ISSRHF Trigger: GAAGTGCCGGGAGGAGATCCAAGAAGTCATGAAAGG...TTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR TCA 90 bp | AAGCGTAATTTCGACCTCAGAGGGTGGAATCAAATCCCAAGGGTGGAGTCTTGTAGTCACTGTTGTAACTaGACACACATTTCTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: KRNFDLRGWNQIPRVESCSHCCN*THISEG Trigger: GCCTTCAGAAATGTGTGTTCAGTTACAACAGTGACT...ACAAGACTCCACCCTTGGGATTTGATTCCACCCTCTGAGGTCGAAATTACGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| 3UTR CAA 72 bp | CAAAACAACAAAGCAAACAGCCTAAATCCTGAGAGCTaGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: QNNKANSLNPES*NCPFMELWVLG Trigger: TCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTCAGGATTTAGGCTGTTTGCTTTGTTGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CCA 90 bp | AGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGACTTCTCCTGGTACTCTaGATACTTTGCCAGGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: STNKILLYKQSFVLQYFRLLLVL*ILCQVE Trigger: TTCAACCTGGCAAAGTATCCAGAGTACCAGGAGAAG...TCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS GCA 90 bp | TCCAAGGTCTTGCCCTGCTTGGCTTTCAGCCATGCCTCGGCGCCCTaGTGGCGCAGCGCCTGCCGCCGCTCCTGTATGACTTCAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SKVLPCLAFSHASAP*WRSACRRSCMTSVV Trigger: CACCACTGAAGTCATACAGGAGCGGCGGCAGGCGCTGCGCCAGCAGGGCGCCGAGGCATGGCTGAAAGCCAAGCAGGGCAAGACCTTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CCA 90 bp | ATTGGGAAGATACATGCTCATGTGACCCAGCAGCCAGTGGCGGCCTaGAGGCTCTGGGAAGCAGCTCAGCTTGCGACAGGTAATGCGGAA | + |
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Preference number: 5 (lower is better) Translates to: IGKIHAHVTQQPVAA*RLWEAAQLATGNAE Trigger: TTCCGCATTACCTGTCGCAAGCTGAGCTGCTTCCCAGAGCCTCCAGGCCGCCACTGGCTGCTGGGTCACATGAGCATGTATCTTCCCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | TGGGTCTTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTGGCTTCCTCCGCACCTaGTGGGTTCGGTCCACGCTC | + |
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Preference number: 5 (lower is better) Translates to: WVLGKDVEDSGLQPQTPAGFLRT*WVRSTL Trigger: GAGCGTGGACCGAACCCACAAGGTGCGGAGGAAGCC...AGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAAGACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS CCA 90 bp | ATACATGCTCATGTGACCCAGCAGCCAGTGGCGGCCTGGAGGCTCTaGGAAGCAGCTCAGCTTGCGACAGGTAATGCGGAAGTCACTAAA | + |
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Preference number: 5 (lower is better) Translates to: IHAHVTQQPVAAWRL*EAAQLATGNAEVTK Trigger: TTTAGTGACTTCCGCATTACCTGTCGCAAGCTGAGCTGCTTCCCAGAGCCTCCAGGCCGCCACTGGCTGCTGGGTCACATGAGCATGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS CCA 90 bp | GCATGGTGTCCAGCACCTTCTTCTCGTTTTGAAGGCCCTTCTCATTaGGAAGATACATGCTCATGTGACCCAGCAGCCAGTGGCGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AWCPAPSSRFEGPSH*EDTCSCDPAASGGL Trigger: CAGGCCGCCACTGGCTGCTGGGTCACATGAGCATGTATCTTCCCAATGAGAAGGGCCTTCAAAACGAGAAGAAGGTGCTGGACACCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS TCA 90 bp | ACTCATCCTTGGGTGCAATGGCAGCTGAGGCACCCAACACAGGCTTaGTGTAATCAGGATGAACAAGCACCAGGAGAGGCAAGAAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: THPWVQWQLRHPTQA*CNQDEQAPGEARKV Trigger: GACCTTTCTTGCCTCTCCTGGTGCTTGTTCATCCTGATTACATCAAGCCTGTGTTGGGTGCCTCAGCTGCCATTGCACCCAAGGATGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | GAGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGGGAAGCAGCTCAGCTaGCGACAGGTAATGCGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ESLNCPFMELWVLGKDVEGKQLS*RQVMRK Trigger: CTTCCGCATTACCTGTCGCAAGCTGAGCTGCTTCCC...TTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | GGCGAAGTCAGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGGGATACTTTGCCAGGTaGAACAGTGCCCAGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: GEVSTNKILLYKQSFVLQGYFAR*NSAQDS Trigger: GCTGTCCTGGGCACTGTTCAACCTGGCAAAGTATCC...CTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCTGACTTCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | TTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAACGTCCATCTGGCAGCTaGATGTCCTCTGTGCAGCGA | + |
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Preference number: 5 (lower is better) Translates to: LGKDVEDSGLQPQTPASKRPSGS*MSSVQR Trigger: TCGCTGCACAGAGGACATCAAGCTGCCAGATGGACG...TTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | TGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAATCGGTGCCGGCTCCATTaGTTCCCTTTGCTGATCAGA | + |
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Preference number: 5 (lower is better) Translates to: WERMLKIQDCNLRLRLLNRCRLH*FPLLIR Trigger: TCTGATCAGCAAAGGGAACAAATGGAGCCGGCACCG...ATTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | GGCGAAGTCAGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGATGAAGTCCAAGGTCTaGCCCTGCTTGGCTTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GEVSTNKILLYKQSFVLQMKSKV*PCLAFS Trigger: GCTGAAAGCCAAGCAGGGCAAGACCTTGGACTTCAT...CTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCTGACTTCGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGGAAGGGGCTTGCAAGGGCCCAGGTTTACAAAACAACAAAGCAAACAGTTCCCCTCTTCATCCTaGGCCAGCAACAGCACATCT | + |
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Preference number: 5 (lower is better) Translates to: QEGRGLQGPRFTKQQSKQFPSSS*ASNSTS Trigger: AGATGTGCTGTTGCTGGCCAAGGATGAAGAGGGGAA...CTGTTTGCTTTGTTGTTTTGTAAACCTGGGCCCTTGCAAGCCCCTTCCTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | GAGAGCTTGAACTGTCCTTTCATGGAGCTGTGGGTCTTGGGAAAGGATGTTGAAGCCTTTCATGACTTCTaGGATCTCCTCCCGGCACTT | + |
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Preference number: 5 (lower is better) Translates to: ESLNCPFMELWVLGKDVEAFHDF*DLLPAL Trigger: AAGTGCCGGGAGGAGATCCAAGAAGTCATGAAAGGC...TTCAACATCCTTTCCCAAGACCCACAGCTCCATGAAAGGACAGTTCAAGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGGAAGGGGCTTGCAAGGGCCCAGGTTTACAAAACAACAAAGCAAACAGCACCTTCTTCTCGTTTaGAAGGCCCTTCTCATTGGG | + |
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Preference number: 5 (lower is better) Translates to: QEGRGLQGPRFTKQQSKQHLLLV*KALLIG Trigger: CCCAATGAGAAGGGCCTTCAAAACGAGAAGAAGGTG...CTGTTTGCTTTGTTGTTTTGTAAACCTGGGCCCTTGCAAGCCCCTTCCTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | AGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGAACTTCAGTGGTGAAGTaGTGCACCGTGTCGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: STNKILLYKQSFVLQYFRTSVVK*CTVSQA Trigger: GGCCTGCGACACGGTGCACAACTTCACCACTGAAGT...TCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | TTGGGAAAGGATGTTGAAGATTCAGGACTGCAACCTCAGACTCCGGCTTCTAAACTCCATTTGTTCCCTTaGCTGATCAGAAGTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: LGKDVEDSGLQPQTPASKLHLFP*LIRSPS Trigger: GGATGGACTTCTGATCAGCAAAGGGAACAAATGGAG...TTTAGAAGCCGGAGTCTGAGGTTGCAGTCCTGAATCTTCAACATCCTTTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | AGCACCAACAAGATACTCCTCTACAAACAAAGCTTTGTCCTCCAGTACTTTCGATGGCGAAGGCTCTCCTaGATACACATGGTGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: STNKILLYKQSFVLQYFRWRRLS*IHMVVK Trigger: CTTCACCACCATGTGTATCAAGGAGAGCCTTCGCCA...TCGAAAGTACTGGAGGACAAAGCTTTGTTTGTAGAGGAGTATCTTGTTGGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS-3UTR CAA 90 bp | AAGCGTAATTTCGACCTCAGAGGGTGGAATCAAATCCCAAGGGTGGAGTCTTGTAAGCAGATAATTCCTTaGGGGATGACACGTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: KRNFDLRGWNQIPRVESCKQIIP*GMTRPS Trigger: AGATGGACGTGTCATCCCCAAAGGAATTATCTGCTT...ACAAGACTCCACCCTTGGGATTTGATTCCACCCTCTGAGGTCGAAATTACGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237491.2 |
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| CDS GCA 72 bp | TTGCCCTGCTTGGCTTTCAGCCATGCCTCGGCGCCCTaGTGGCGCAGCGCCTGCCGCCGCTCCTGTATGACT | + |
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Preference number: 6 (lower is better) Translates to: LPCLAFSHASAP*WRSACRRSCMT Trigger: AGTCATACAGGAGCGGCGGCAGGCGCTGCGCCAGCAGGGCGCCGAGGCATGGCTGAAAGCCAAGCAGGGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS GCA 72 bp | TTCAGCCATGCCTCGGCGCCCTGCTGGCGCAGCGCCTaGCGCCGCTCCTGTATGACTTCAGTGGTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FSHASAPCWRSA*RRSCMTSVVKL Trigger: CAACTTCACCACTGAAGTCATACAGGAGCGGCGGCAGGCGCTGCGCCAGCAGGGCGCCGAGGCATGGCTGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CAA 72 bp | TCCGTGCGTAGAATAAGCTCCGGCTTCCTCCGCACCTaGTGGGTTCGGTCCACGCTCAGGCGGAAGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVRRISSGFLRT*WVRSTLRRKRS Trigger: GCTGCGCTTCCGCCTGAGCGTGGACCGAACCCACAAGGTGCGGAGGAAGCCGGAGCTTATTCTACGCACGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CAA 90 bp | AGGCCGTTCTCCGTGCGTAGAATAAGCTCCGGCTTCCTCCGCACCTaGTGGGTTCGGTCCACGCTCAGGCGGAAGCGCAGCAGTGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: RPFSVRRISSGFLRT*WVRSTLRRKRSSVS Trigger: GCTGACACTGCTGCGCTTCCGCCTGAGCGTGGACCGAACCCACAAGGTGCGGAGGAAGCCGGAGCTTATTCTACGCACGGAGAACGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CCA 72 bp | GTGCGTAGAATAAGCTCCGGCTTCCTCCGCACCTTGTaGGTTCGGTCCACGCTCAGGCGGAAGCGCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: VRRISSGFLRTL*VRSTLRRKRSS Trigger: ACTGCTGCGCTTCCGCCTGAGCGTGGACCGAACCCACAAGGTGCGGAGGAAGCCGGAGCTTATTCTACGCAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CCA 72 bp | ATACATGCTCATGTGACCCAGCAGCCAGTGGCGGCCTaGAGGCTCTGGGAAGCAGCTCAGCTTGCGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: IHAHVTQQPVAA*RLWEAAQLATG Trigger: ACCTGTCGCAAGCTGAGCTGCTTCCCAGAGCCTCCAGGCCGCCACTGGCTGCTGGGTCACATGAGCATGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS CAA 90 bp | CCCAGCAGCCAGTGGCGGCCTGGAGGCTCTGGGAAGCAGCTCAGCTaGCGACAGGTAATGCGGAAGTCACTAAATAATTTGAATGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSSQWRPGGSGKQLS*RQVMRKSLNNLNAR Trigger: GCGGGCATTCAAATTATTTAGTGACTTCCGCATTACCTGTCGCAAGCTGAGCTGCTTCCCAGAGCCTCCAGGCCGCCACTGGCTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS TCA 72 bp | GCAGGCGGCGGTGCCGGCTCCATTTGTTCCCTTTGCTaGTCAGAAGTCCATCCCCTAACCAAGGCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AGGGAGSICSLC*SEVHPLTKASG Trigger: TCCTGAAGCCTTGGTTAGGGGATGGACTTCTGATCAGCAAAGGGAACAAATGGAGCCGGCACCGCCGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS GCA 72 bp | CTCCTCCCGGCACTTCTCCTGGTACTCTGGATACTTTaGCAGGTTGAACAGTGCCCAGGACAGCCCACTAGA | + |
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Preference number: 6 (lower is better) Translates to: LLPALLLVLWIL*QVEQCPGQPTR Trigger: TCTAGTGGGCTGTCCTGGGCACTGTTCAACCTGGCAAAGTATCCAGAGTACCAGGAGAAGTGCCGGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS GCA 72 bp | TCTCGTTTTGAAGGCCCTTCTCATTGGGAAGATACATaGTCATGTGACCCAGCAGCCAGTGGCGGCCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SRFEGPSHWEDT*SCDPAASGGLE Trigger: CTCCAGGCCGCCACTGGCTGCTGGGTCACATGAGCATGTATCTTCCCAATGAGAAGGGCCTTCAAAACGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS TCA 72 bp | TGGGTGCAATGGCAGCTGAGGCACCCAACACAGGCTTaGTGTAATCAGGATGAACAAGCACCAGGAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WVQWQLRHPTQA*CNQDEQAPGEA Trigger: TGCCTCTCCTGGTGCTTGTTCATCCTGATTACATCAAGCCTGTGTTGGGTGCCTCAGCTGCCATTGCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS GCA 72 bp | CTCCTGGTACTCTGGATACTTTGCCAGGTTGAACAGTaGCCAGGACAGCCCACTAGATGTTGTGTCATGACC | + |
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Preference number: 6 (lower is better) Translates to: LLVLWILCQVEQ*PGQPTRCCVMT Trigger: GGTCATGACACAACATCTAGTGGGCTGTCCTGGGCACTGTTCAACCTGGCAAAGTATCCAGAGTACCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CAA 90 bp | GGCTGTGAGGTAGTACATGAAATCCAGGTAGTGATGCAAGCGGTATaGGCGCCGCACCACCAGAGCGCTCAGTTCGATAATGGAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: GCEVVHEIQVVMQAV*APHHQSAQFDNGRN Trigger: ATTTCTTCCATTATCGAACTGAGCGCTCTGGTGGTGCGGCGCCAATACCGCTTGCATCACTACCTGGATTTCATGTACTACCTCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CCA 72 bp | CCAGCACCTTCTTCTCGTTTTGAAGGCCCTTCTCATTaGGAAGATACATGCTCATGTGACCCAGCAGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PAPSSRFEGPSH*EDTCSCDPAAS Trigger: ACTGGCTGCTGGGTCACATGAGCATGTATCTTCCCAATGAGAAGGGCCTTCAAAACGAGAAGAAGGTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS CAA 72 bp | GTAGTACATGAAATCCAGGTAGTGATGCAAGCGGTATaGGCGCCGCACCACCAGAGCGCTCAGTTCGATAAT | + |
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Preference number: 6 (lower is better) Translates to: VVHEIQVVMQAV*APHHQSAQFDN Trigger: ATTATCGAACTGAGCGCTCTGGTGGTGCGGCGCCAATACCGCTTGCATCACTACCTGGATTTCATGTACTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003413.7 ENSMUST00000237491.2 |
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| CDS CAA 72 bp | GATGTGGTGCATGGTGTCCAGCACCTTCTTCTCGTTTaGAAGGCCCTTCTCATTGGGAAGATACATGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: DVVHGVQHLLLV*KALLIGKIHAH Trigger: ATGAGCATGTATCTTCCCAATGAGAAGGGCCTTCAAAACGAGAAGAAGGTGCTGGACACCATGCACCACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS CAA 90 bp | AAGCAGCTCAGCTTGCGACAGGTAATGCGGAAGTCACTAAATAATTaGAATGCCCGCACCAGCAGGCGGAAGAAGAAGAAAAGGACCAAT | + |
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Preference number: 6 (lower is better) Translates to: KQLSLRQVMRKSLNN*NARTSRRKKKKRTN Trigger: ATTGGTCCTTTTCTTCTTCTTCCGCCTGCTGGTGCGGGCATTCAAATTATTTAGTGACTTCCGCATTACCTGTCGCAAGCTGAGCTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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| CDS CAA 72 bp | AGCTTGCGACAGGTAATGCGGAAGTCACTAAATAATTaGAATGCCCGCACCAGCAGGCGGAAGAAGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SLRQVMRKSLNN*NARTSRRKKKK Trigger: TTTCTTCTTCTTCCGCCTGCTGGTGCGGGCATTCAAATTATTTAGTGACTTCCGCATTACCTGTCGCAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003413.7 ENSMUST00000236307.2 ENSMUST00000237491.2 |
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