Pregenerated sensors for CYP4F37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062464Ensembl transcript IDs: ENSMUST00000077639.7
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTTTGCCTCAAAGACACCAACCCATTCTCTTCAGAGACCACGGCTaGTTCTGTGGCCCTCTAGCGCCCCCTGCTGGCGTTCTGTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: TLPQRHQPILFRDHG*FCGPLAPPAGVLWS Trigger: GCTCCACAGAACGCCAGCAGGGGGCGCTAGAGGGCCACAGAATCAGCCGTGGTCTCTGAAGAGAATGGGTTGGTGTCTTTGAGGCAAAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR-3UTR GCA 90 bp | CGACTCCCTCTCCTAATCTGCTCCAAAATCTACAGTGACTTTAACAGGATGAAGCCCTCTAGCGCCCCCTaGTGGCGTTCTGTGGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RLPLLICSKIYSDFNRMKPSSAP*WRSVEP Trigger: TGGCTCCACAGAACGCCAGCAGGGGGCGCTAGAGGG...CTTCATCCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR-3UTR GCA 90 bp | ATAGTCTCCAACTCACGATCCCCCTGTCACAGGGACTGGATCTCAGGGTTGAGTGCCCACTGCTGTAAGTaGAGCTCTAAGAAGCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: IVSNSRSPCHRDWISGLSAHCCK*SSKKPK Trigger: TTTTGGCTTCTTAGAGCTGCACTTACAGCAGTGGGC...ACTCAACCCTGAGATCCAGTCCCTGTGACAGGGGGATCGTGAGTTGGAGACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAGCCCACTGCTGTAAGTGCAGCTCTAAGAAGCCAAAACACTGGAAGAGCAGCAAACAGGTACTTTaGCTCAAAGACACCAACCCA | + |
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Preference number: 2 (lower is better) Translates to: VAAHCCKCSSKKPKHWKSSKQVL*LKDTNP Trigger: TGGGTTGGTGTCTTTGAGGCAAAGTACCTGTTTGCT...GCTCTTCCAGTGTTTTGGCTTCTTAGAGCTGCACTTACAGCAGTGGGCTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CAA 90 bp | AGTGAACACGACCCAGGACATAAGTTAATGAAGGATTCTGGGACTTaGTTTACTTTAAGATGCCTTAGGACCTTGGGAATCACAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SEHDPGHKLMKDSGT*FTLRCLRTLGITSP Trigger: TGGGCTTGTGATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGAATCCTTCATTAACTTATGTCCTGGGTCGTGTTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CAA 90 bp | ATGAAGGATTCTGGGACTTTGTTTACTTTAAGATGCCTTAGGACCTaGGGAATCACAAGCCCAGAATGTCATTTAACATCCTTCTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: MKDSGTLFTLRCLRT*GITSPECHLTSFSK Trigger: CTTTGAGAAGGATGTTAAATGACATTCTGGGCTTGTGATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGAATCCTTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CCA 72 bp | CCAACCCATTCTCTTCAGAGACCACGGCTGATTCTGTaGCCCTCTAGCGCCCCCTGCTGGCGTTCTGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: PTHSLQRPRLIL*PSSAPCWRSVE Trigger: CTCCACAGAACGCCAGCAGGGGGCGCTAGAGGGCCACAGAATCAGCCGTGGTCTCTGAAGAGAATGGGTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR TCA 72 bp | CAAAGACACCAACCCATTCTCTTCAGAGACCACGGCTaGTTCTGTGGCCCTCTAGCGCCCCCTGCTGGCGTT | + |
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Preference number: 3 (lower is better) Translates to: QRHQPILFRDHG*FCGPLAPPAGV Trigger: AACGCCAGCAGGGGGCGCTAGAGGGCCACAGAATCAGCCGTGGTCTCTGAAGAGAATGGGTTGGTGTCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR GCA 72 bp | CCAAGCATGCCAGAAACTCGACTCCCTCTCCTAATCTaGTCCAAAATCTACAGTGACTTTAACAGGATGAAG | + |
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Preference number: 3 (lower is better) Translates to: PSMPETRLPLLI*SKIYSDFNRMK Trigger: CTTCATCCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCGAGTTTCTGGCATGCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CCA 72 bp | CACTGCTGTAAGTGCAGCTCTAAGAAGCCAAAACACTaGAAGAGCGCTTCAAATATAACGAAGAGGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: HCCKCSSKKPKH*KSASNITKRKR Trigger: TCTCTTCCTCTTCGTTATATTTGAAGCGCTCTTCCAGTGTTTTGGCTTCTTAGAGCTGCACTTACAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR GCA 72 bp | TTAATGAAGGATTCTGGGACTTTGTTTACTTTAAGATaGCTTAGGACCTTGGGAATCACAAGCCCAGAATGT | + |
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Preference number: 3 (lower is better) Translates to: LMKDSGTLFTLR*LRTLGITSPEC Trigger: ACATTCTGGGCTTGTGATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGAATCCTTCATTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR TCA 72 bp | TTAGACATGCTAATTAGAGGAAACAAAGAGGGCTTTTaGTTGCTGTACTTCAATAGTGTGATAGCTGCACTT | + |
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Preference number: 3 (lower is better) Translates to: LDMLIRGNKEGF*LLYFNSVIAAL Trigger: AAGTGCAGCTATCACACTATTGAAGTACAGCAATCAAAAGCCCTCTTTGTTTCCTCTAATTAGCATGTCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CAA 72 bp | TCACGATCCCCCTGTCACAGGGACTGGATCTCAGGGTaGAGTCACAGCGTCCACCTGACACTGTTTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: SRSPCHRDWISG*SHSVHLTLFLM Trigger: CATTAAAAACAGTGTCAGGTGGACGCTGTGACTCAACCCTGAGATCCAGTCCCTGTGACAGGGGGATCGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR TCA 90 bp | AAGCCTTGCTGGGCTAAATCAGCAAACAGGTACTTTGCCTCAAAGACACCAACCGCTGAGGGAAACATCTaGGGCGGGAGCAGTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: KPCWAKSANRYFASKTPTAEGNI*GGSSSH Trigger: GTGAGAACTGCTCCCGCCTCAGATGTTTCCCTCAGC...GGTTGGTGTCTTTGAGGCAAAGTACCTGTTTGCTGATTTAGCCCAGCAAGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | CCCACTGCTGTAAGTGCAGCTCTAAGAAGCCAAAACACTGGAAGAGCGCTTCAACAGCACAGGGATCACTaGTCCCAGCCAACAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: PTAVSAALRSQNTGRALQQHRDH*SQPTEM Trigger: CATCTCTGTTGGCTGGGACCAGTGATCCCTGTGCTG...TTGAAGCGCTCTTCCAGTGTTTTGGCTTCTTAGAGCTGCACTTACAGCAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR GCA 90 bp | ATAGTCTCCAACTCACGATCCCCCTGTCACAGGGACTGGATCTCAGGGTTGAGTCAGTCATCAGCTGCATaGCTTCCTCATTGTGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: IVSNSRSPCHRDWISGLSQSSAA*LPHCAQ Trigger: TTGAGCACAATGAGGAAGGCATGCAGCTGATGACTG...ACTCAACCCTGAGATCCAGTCCCTGTGACAGGGGGATCGTGAGTTGGAGACTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR GCA 90 bp | CCCACTGCTGTAAGTGCAGCTCTAAGAAGCCAAAACACTGGAAGAGCGCTTCAAAGGAGGCCTCTTGTGTaGGTTTTCTGGGTCAAAGCG | + |
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Preference number: 4 (lower is better) Translates to: PTAVSAALRSQNTGRALQRRPLV*VFWVKA Trigger: CGCTTTGACCCAGAAAACGCACACAAGAGGCCTCCT...TTGAAGCGCTCTTCCAGTGTTTTGGCTTCTTAGAGCTGCACTTACAGCAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR GCA 90 bp | TCTGGGACTTTGTTTACTTTAAGATGCCTTAGGACCTTGGGAATCACAAGCCCAAGTCCTTCAGCACTGTaGTCAGCGGCTCCACCCGCA | + |
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Preference number: 4 (lower is better) Translates to: SGTLFTLRCLRTLGITSPSPSAL*SAAPPA Trigger: TGCGGGTGGAGCCGCTGAGCACAGTGCTGAAGGACT...TGGGCTTGTGATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR TCA 90 bp | GAAGAGAAGGCAGAAGAAAGTGGAAAGAGTGCGATTAGGCTTTGTTTCAGTGACCAGCAGAAGATGCCATaGCAAGGTCACCACAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: EEKAEESGKSAIRLCFSDQQKMP*QGHHRA Trigger: GGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTG...GTCACTGAAACAAAGCCTAATCGCACTCTTTCCACTTTCTTCTGCCTTCTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | CCCACTGCTGTAAGTGCAGCTCTAAGAAGCCAAAACACTGGAAGAGCGCTTCAAAACTCATCATGGTTTTaGCTGGAGAGAGTGTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: PTAVSAALRSQNTGRALQNSSWF*LERVCR Trigger: ACGGCACACTCTCTCCAGCCAAAACCATGATGAGTT...TTGAAGCGCTCTTCCAGTGTTTTGGCTTCTTAGAGCTGCACTTACAGCAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | ATAGTCTCCAACTCACGATCCCCCTGTCACAGGGACTGGATCTCAGGGTTGAGTTTCCATGTTCATCCTTaGCCAACAAGAGAACGTCAA | + |
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Preference number: 4 (lower is better) Translates to: IVSNSRSPCHRDWISGLSFHVHP*PTRERQ Trigger: TTGACGTTCTCTTGTTGGCCAAGGATGAACATGGAA...ACTCAACCCTGAGATCCAGTCCCTGTGACAGGGGGATCGTGAGTTGGAGACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | TTTAACAGGATGAAGTCCAAGCTTCGACTGGAAAAGAACTCTCAGCGTGAAAGCGAGGAGATCTATGACTaGGGGATGCAGCCGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: FNRMKSKLRLEKNSQRESEEIYD*GMQPQT Trigger: AGTCTGCGGCTGCATCCCCCAGTCATAGATCTCCTC...GCTTTCACGCTGAGAGTTCTTTTCCAGTCGAAGCTTGGACTTCATCCTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR GCA 90 bp | GAAACTCGACTCCCTCTCCTAATCTGCTCCAAAATCTACAGTGACTTTAACAGGCCAAGCAGCAGAAGATaGCATGACAAGGTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: ETRLPLLICSKIYSDFNRPSSRR*HDKVTT Trigger: TGTGGTGACCTTGTCATGGCATCTTCTGCTGCTTGG...CCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCGAGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR GCA 90 bp | AAGCCTTGCTGGGCTAAATCAGCAAACAGGTACTTTGCCTCAAAGACACCAACCCATTGTGCTCAATCATaGCCAAGTGACCCAAAAACC | + |
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Preference number: 4 (lower is better) Translates to: KPCWAKSANRYFASKTPTHCAQS*PSDPKT Trigger: GGTTTTTGGGTCACTTGGGCATGATTGAGCACAATG...GGTTGGTGTCTTTGAGGCAAAGTACCTGTTTGCTGATTTAGCCCAGCAAGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR TCA 90 bp | TTTAACAGGATGAAGTCCAAGCTTCGACTGGAAAAGAACTCTCAGCGTGAAAGCGCAGTTCTCACAGAATaGGTAAGTCCAGGCAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FNRMKSKLRLEKNSQRESAVLTE*VSPGKD Trigger: ATCCTTGCCTGGACTTACTCATTCTGTGAGAACTGC...GCTTTCACGCTGAGAGTTCTTTTCCAGTCGAAGCTTGGACTTCATCCTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR TCA 90 bp | TACAGTGACTTTAACAGGATGAAGTCCAAGCTTCGACTGGAAAAGAACTCTCAGTTTCTTTTAGGAGGCTaGGGGAAACATCTGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: YSDFNRMKSKLRLEKNSQFLLGG*GKHLRR Trigger: CCGCCTCAGATGTTTCCCTCAGCCTCCTAAAAGAAA...CTGAGAGTTCTTTTCCAGTCGAAGCTTGGACTTCATCCTGTTAAAGTCACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR GCA 90 bp | TTTAACAGGATGAAGTCCAAGCTTCGACTGGAAAAGAACTCTCAGCGTGAAAGCCAGAGTCAACGCCAGTaGCACCATCATCTCATTCAT | + |
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Preference number: 4 (lower is better) Translates to: FNRMKSKLRLEKNSQRESQSQRQ*HHHLIH Trigger: ATGAATGAGATGATGGTGGCACTGGCGTTGACTCTG...GCTTTCACGCTGAGAGTTCTTTTCCAGTCGAAGCTTGGACTTCATCCTGTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | TACAGTGACTTTAACAGGATGAAGTCCAAGCTTCGACTGGAAAAGAACTCTCAGCATCATGGTTTTGGCTaGAGAGAGTGTGCCGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YSDFNRMKSKLRLEKNSQHHGFG*RECAVS Trigger: AGAGACGGCACACTCTCTCCAGCCAAAACCATGATG...CTGAGAGTTCTTTTCCAGTCGAAGCTTGGACTTCATCCTGTTAAAGTCACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | GAAACTCGACTCCCTCTCCTAATCTGCTCCAAAATCTACAGTGACTTTAACAGGAGAACAATTGGAGGGTaGGGTAAAGAAGCCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ETRLPLLICSKIYSDFNRRTIGG*GKEASR Trigger: CCTTGAGGCTTCTTTACCCCACCCTCCAATTGTTCT...CCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCGAGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CCA 90 bp | AAACACTGGAAGAGCGCTTCAAATATAACGAAGAGGAAGAGAAGGCAGAAGAAATCCAGGCAAGGATTCTaGCCAAAATCCAAGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: KHWKSASNITKRKRRQKKSRQGF*PKSKMP Trigger: CGGCATCTTGGATTTTGGCCAGAATCCTTGCCTGGA...TTTCTTCTGCCTTCTCTTCCTCTTCGTTATATTTGAAGCGCTCTTCCAGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR TCA 90 bp | CGACTCCCTCTCCTAATCTGCTCCAAAATCTACAGTGACTTTAACAGGATGAAGCAAGAAGAGCTGATGTaGCCTTTTTATTACGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RLPLLICSKIYSDFNRMKQEELM*PFYYEG Trigger: TCCCTCGTAATAAAAAGGTCACATCAGCTCTTCTTG...CTTCATCCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR TCA 90 bp | GAAACTCGACTCCCTCTCCTAATCTGCTCCAAAATCTACAGTGACTTTAACAGGACGAACAAGAAGAGCTaGTGTGACCTTTTTATTACG | + |
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Preference number: 4 (lower is better) Translates to: ETRLPLLICSKIYSDFNRTNKKS*CDLFIT Trigger: CGTAATAAAAAGGTCACATCAGCTCTTCTTGTTCGT...CCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCGAGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CAA 72 bp | TCTGGGACTTTGTTTACTTTAAGATGCCTTAGGACCTaGGGAATCACAAGCCCAGAATGTCATTTAACATCC | + |
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Preference number: 4 (lower is better) Translates to: SGTLFTLRCLRT*GITSPECHLTS Trigger: GGATGTTAAATGACATTCTGGGCTTGTGATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| 3UTR CAA 72 bp | GACCCAGGACATAAGTTAATGAAGGATTCTGGGACTTaGTTTACTTTAAGATGCCTTAGGACCTTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: DPGHKLMKDSGT*FTLRCLRTLGI Trigger: GATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGAATCCTTCATTAACTTATGTCCTGGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | ATAGTCTCCAACTCACGATCCCCCTGTCACAGGGACTGGATCTCAGGGTTGAGTACCAGGTCACAGGCCTaGCGGAAGCGCCGCCCATCA | + |
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Preference number: 5 (lower is better) Translates to: IVSNSRSPCHRDWISGLSTRSQA*RKRRPS Trigger: TGATGGGCGGCGCTTCCGCAAGGCCTGTGACCTGGT...ACTCAACCCTGAGATCCAGTCCCTGTGACAGGGGGATCGTGAGTTGGAGACTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS CCA 90 bp | GGGGGCAACAAATGCAGGGTCAACAATCCTCAGCACAGGGATCACTaGTCCCAGCCAACAGAGATGGACATCTCGGTAAGTCTGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GGNKCRVNNPQHRDH*SQPTEMDISVSLAC Trigger: GCAGGCCAGACTTACCGAGATGTCCATCTCTGTTGGCTGGGACCAGTGATCCCTGTGCTGAGGATTGTTGACCCTGCATTTGTTGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS GCA 90 bp | AGGATTCTGGCCAAAATCCAAGATGCCGCTCCAAGCAGCAGAAGATaGCATGACAAGGTCACCACAGAGCCCAGGTCCAGCCCAGACACA | + |
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Preference number: 5 (lower is better) Translates to: RILAKIQDAAPSSRR*HDKVTTEPRSSPDT Trigger: TGTGTCTGGGCTGGACCTGGGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTGCTTGGAGCGGCATCTTGGATTTTGGCCAGAATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS GCA 90 bp | CACTGGTCCCAGCCAACAGAGATGGACATCTCGGTAAGTCTGGCCTaGTTCAGTCATCAGCTGCATGCCTTCCTCATTGTGCTCAATCAT | + |
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Preference number: 5 (lower is better) Translates to: HWSQPTEMDISVSLA*FSHQLHAFLIVLNH Trigger: ATGATTGAGCACAATGAGGAAGGCATGCAGCTGATGACTGAAGCAGGCCAGACTTACCGAGATGTCCATCTCTGTTGGCTGGGACCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | ATAGTCTCCAACTCACGATCCCCCTGTCACAGGGACTGGATCTCAGGGTTGAGTGATAGGTGCTTCCACTaGGCGTGCATGATGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: IVSNSRSPCHRDWISGLSDRCFH*ACMMFT Trigger: TGTGAACATCATGCACGCCAAGTGGAAGCACCTATC...ACTCAACCCTGAGATCCAGTCCCTGTGACAGGGGGATCGTGAGTTGGAGACTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | AAGCCTTGCTGGGCTAAATCAGCAAACAGGTACTTTGCCTCAAAGACACCAACCGCCAGAGGAGGCCTCTaGTGTGCGTTTTCTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KPCWAKSANRYFASKTPTARGGL*CAFSGS Trigger: TGACCCAGAAAACGCACACAAGAGGCCTCCTCTGGC...GGTTGGTGTCTTTGAGGCAAAGTACCTGTTTGCTGATTTAGCCCAGCAAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS GCA 90 bp | GATGGACATCTCGGTAAGTCTGGCCTGCTTCAGTCATCAGCTGCATaGCTTCCTCATTGTGCTCAATCATGCCCAAGTGACCCAAAAACC | + |
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Preference number: 5 (lower is better) Translates to: DGHLGKSGLLQSSAA*LPHCAQSCPSDPKT Trigger: GGTTTTTGGGTCACTTGGGCATGATTGAGCACAATGAGGAAGGCATGCAGCTGATGACTGAAGCAGGCCAGACTTACCGAGATGTCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | CGACTCCCTCTCCTAATCTGCTCCAAAATCTACAGTGACTTTAACAGGATGAAGCGATGGCGGCTCCACTaGTCACCTGAATTCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: RLPLLICSKIYSDFNRMKRWRLH*SPEFRK Trigger: CTTCCTGAATTCAGGTGACAAGTGGAGCCGCCATCG...CTTCATCCTGTTAAAGTCACTGTAGATTTTGGAGCAGATTAGGAGAGGGAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | TTTAACAGGATGAAGTCCAAGCTTCGACTGGAAAAGAACTCTCAGCGTGAAAGCGCCTCAAGGTCAGGTTaGGAGTCCTTCAGCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: FNRMKSKLRLEKNSQRESASRSG*ESFSTV Trigger: CACAGTGCTGAAGGACTCCAAACCTGACCTTGAGGC...GCTTTCACGCTGAGAGTTCTTTTCCAGTCGAAGCTTGGACTTCATCCTGTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | GAAGAGAAGGCAGAAGAAAGTGGAAAGAGTGCGATTAGGCTTTGTTTCAGTGACGAACTCATCATGGTTTaGGCTGGAGAGAGTGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: EEKAEESGKSAIRLCFSDELIMV*AGESVP Trigger: CGGCACACTCTCTCCAGCCAAAACCATGATGAGTTC...GTCACTGAAACAAAGCCTAATCGCACTCTTTCCACTTTCTTCTGCCTTCTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS-3UTR CAA 90 bp | TCTGGGACTTTGTTTACTTTAAGATGCCTTAGGACCTTGGGAATCACAAGCCCATGCATGCCTTCCTCATaGTGCTCAATCATGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SGTLFTLRCLRTLGITSPCMPSS*CSIMPK Trigger: CTTGGGCATGATTGAGCACAATGAGGAAGGCATGCA...TGGGCTTGTGATTCCCAAGGTCCTAAGGCATCTTAAAGTAAACAAAGTCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS CCA 72 bp | CAGCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTaGCTTCCGGCGCGGCTCCTTGTCATCCGGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: QPQPALRPQDYL*LPARLLVIRQD Trigger: ATCCTGCCGGATGACAAGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS TCA 72 bp | AATCCAAGATGCCGCTCCAAGCAGCAGAAGATGCCATaGCAAGGTCACCACAGAGCCCAGGTCCAGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NPRCRSKQQKMP*QGHHRAQVQPR Trigger: TCTGGGCTGGACCTGGGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTGCTTGGAGCGGCATCTTGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS GCA 72 bp | GCCAAAATCCAAGATGCCGCTCCAAGCAGCAGAAGATaGCATGACAAGGTCACCACAGAGCCCAGGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AKIQDAAPSSRR*HDKVTTEPRSS Trigger: GCTGGACCTGGGCTCTGTGGTGACCTTGTCATGGCATCTTCTGCTGCTTGGAGCGGCATCTTGGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS CAA 72 bp | ATTGGAGGGTGGGGTAAAGAAGCCTCAAGGTCAGGTTaGGAGTCCTTCAGCACTGTGCTCAGCGGCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: IGGWGKEASRSG*ESFSTVLSGST Trigger: GGTGGAGCCGCTGAGCACAGTGCTGAAGGACTCCAAACCTGACCTTGAGGCTTCTTTACCCCACCCTCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS GCA 72 bp | CTCGGTAAGTCTGGCCTGCTTCAGTCATCAGCTGCATaGCTTCCTCATTGTGCTCAATCATGCCCAAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LGKSGLLQSSAA*LPHCAQSCPSD Trigger: GTCACTTGGGCATGATTGAGCACAATGAGGAAGGCATGCAGCTGATGACTGAAGCAGGCCAGACTTACCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS CCA 72 bp | AAATGCAGGGTCAACAATCCTCAGCACAGGGATCACTaGTCCCAGCCAACAGAGATGGACATCTCGGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: KCRVNNPQHRDH*SQPTEMDISVS Trigger: ACTTACCGAGATGTCCATCTCTGTTGGCTGGGACCAGTGATCCCTGTGCTGAGGATTGTTGACCCTGCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS TCA 72 bp | AGGGAAACATCTGAGGCGGGAGCAGTTCTCACAGAATaGGTAAGTCCAGGCAAGGATTCTGGCCAAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: RETSEAGAVLTE*VSPGKDSGQNP Trigger: TGGATTTTGGCCAGAATCCTTGCCTGGACTTACTCATTCTGTGAGAACTGCTCCCGCCTCAGATGTTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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| CDS CCA 72 bp | AGTTCTCACAGAATGAGTAAGTCCAGGCAAGGATTCTaGCCAAAATCCAAGATGCCGCTCCAAGCAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSHRMSKSRQGF*PKSKMPLQAAE Trigger: TTCTGCTGCTTGGAGCGGCATCTTGGATTTTGGCCAGAATCCTTGCCTGGACTTACTCATTCTGTGAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077639.7 |
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