Pregenerated sensors for CYP4F17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091586Ensembl transcript IDs: ENSMUST00000165999.2, ENSMUST00000235238.2, ENSMUST00000237003.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTaGACTCAGACAGCAGCCCCAGTCTCTTCTCAGCCAAGCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: TLISLQALWATQKGP*TQTAAPVSSQPSFQ Trigger: CTGGAAGCTTGGCTGAGAAGAGACTGGGGCTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 90 bp | GACACCACCACACAGGAAGCCTGCCAGCGTGAGGTCATTTTAAATTaGAGCTGCCTCAGTGGCCTTAGCCATCACAAGCCGTGGACATCA | + |
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Preference number: 1 (lower is better) Translates to: DTTTQEACQREVILN*SCLSGLSHHKPWTS Trigger: TGATGTCCACGGCTTGTGATGGCTAAGGCCACTGAGGCAGCTTCAATTTAAAATGACCTCACGCTGGCAGGCTTCCTGTGTGGTGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR GCA 90 bp | AGGGTATCAGATCCCATAAGAGATGGCTGTGAGCCACCCTGTGGTTaGTGGGAATTGAACTCAGGACCTCTGAAAGAGCAGGCAATGCTC | + |
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Preference number: 1 (lower is better) Translates to: RVSDPIRDGCEPPCG*WELNSGPLKEQAML Trigger: GAGCATTGCCTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAGCCATCTCTTATGGGATCTGATACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR CCA 90 bp | GTATCAGATCCCATAAGAGATGGCTGTGAGCCACCCTGTGGTTGCTaGGAATTGAACTCAGGACCTCTGAAAGAGCAGGCAATGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: VSDPIRDGCEPPCGC*ELNSGPLKEQAMLL Trigger: TAAGAGCATTGCCTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAGCCATCTCTTATGGGATCTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR GCA 90 bp | TTTAATATCATTTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTaGCCTTCATTTCTAATAAACAGCCCTTCAGATATGACAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: FNIIWRGSQASPLGS*PSFLINSPSDMTGT Trigger: TGTGCCTGTCATATCTGAAGGGCTGTTTATTAGAAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 90 bp | GAGGAAGAAAATCAAATCCTAGAACAGTCAGAAAAGTTAAGTGTGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: EEENQILEQSEKLSV*VCVCVCVCVCVCVC Trigger: GCACACACACACACACACACACACACACACACACACACACACTCACACACTTAACTTTTCTGACTGTTCTAGGATTTGATTTTCTTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGGATCTGCCTGTCTCTCCATGGAGCCACCCCACCACCACCACCCAGCCCCAGTTCTTGAGCTGGGGTaGATGGAACTCTCATCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LGSACLSMEPPHHHHPAPVLELG*MELSSV Trigger: GACTGATGAGAGTTCCATGCACCCCAGCTCAAGAAC...TGGGGCTGGGTGGTGGTGGTGGGGTGGCTCCATGGAGAGACAGGCAGATCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGGGATCTGCCTGTCTCTCCATGGAGCCACCCCACCACCACCACCCAGCCCCTGGCCCATTTCTAATTaGACCGCTCTGGTGGTTAGG | + |
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Preference number: 2 (lower is better) Translates to: TGICLSLHGATPPPPPSPWPISN*TALVVR Trigger: CCTAACCACCAGAGCGGTGCAATTAGAAATGGGCCA...GGGGCTGGGTGGTGGTGGTGGGGTGGCTCCATGGAGAGACAGGCAGATCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR CAA 90 bp | AACTCTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTaGGACTCAGACAGCAGCCCCAGTCTCTTCTCAGCCAAGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: NSHQSAGPVGYPERP*DSDSSPSLFSAKLP Trigger: TGGAAGCTTGGCTGAGAAGAGACTGGGGCTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGACAGCAGCGCTTACTCTGGGATTaGCAGAGGAAAGTGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SVCRPCGLPRKALGLRQQRLLWD*QRKVTG Trigger: CCCAGTCACTTTCCTCTGCCAATCCCAGAGTAAGCG...CTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGACAGCAGAAACTCCGCTTACTCTaGGATTGGCAGAGGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: SVCRPCGLPRKALGLRQQKLRLL*DWQRKV Trigger: CACTTTCCTCTGCCAATCCCAGAGTAAGCGGAGTTT...CTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCCGTGGACATCATTTAATATCATTTGGAGGGGCTCCCAGGCTTCTCCCCTGGTTAGGACAGAGATTTaGTACAAGTTAAAGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KPWTSFNIIWRGSQASPLVRTEI*YKLKAS Trigger: GCTGGCCTTTAACTTGTAGCAAATCTCTGTCCTAAC...CAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATTAAATGATGTCCACGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGATCCCATAAGAGATGGCTGTGAGCCACCCTGTGGTTGCTGGGAATTGAACAGCCATCACAAGCCGTaGACATCATTTAATATCATT | + |
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Preference number: 2 (lower is better) Translates to: SDPIRDGCEPPCGCWELNSHHKP*TSFNII Trigger: AATGATATTAAATGATGTCCACGGCTTGTGATGGCT...GTTCAATTCCCAGCAACCACAGGGTGGCTCACAGCCATCTCTTATGGGATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR TCA 90 bp | TCTATATATGGGTACACTGTAATTGTCTTCAAACACACTAGAAGAGGGTATCAGACAGCCCTTCAGATATaGCAGGCACAGTGGCCCATT | + |
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Preference number: 2 (lower is better) Translates to: SIYGYTVIVFKHTRRGYQTALQI*QAQWPI Trigger: AATGGGCCACTGTGCCTGTCATATCTGAAGGGCTGT...CTGATACCCTCTTCTAGTGTGTTTGAAGACAATTACAGTGTACCCATATATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCGTTCTTGAGCTGGGGTGCATGGAACTCTCATCAGTCTGCAGGCCCTGTTACCCAGAAAGGCCCTaGGACTCAGACAGCAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: KAVLELGCMELSSVCRPCYPERP*DSDSSP Trigger: GGGGCTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTA...ACAGGGCCTGCAGACTGATGAGAGTTCCATGCACCCCAGCTCAAGAACGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | GCTTCCAGACAGCCTCTGTTGTCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTCCGCTTACTCTGGGAT | + |
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Preference number: 3 (lower is better) Translates to: ASRQPLLSCSAL*WLWVKLRLLWD Trigger: ATCCCAGAGTAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGACAACAGAGGCTGTCTGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR GCA 72 bp | GTTCTTGAGCTGGGGTGCATGGAACTCTCATCAGTCTaGAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: VLELGCMELSSV*RPCGLPRKALG Trigger: TCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAGAGTTCCATGCACCCCAGCTCAAGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCGTTCTTGAGCTGGGGTGCATGGAACTCTCATCAGTCTGCAGGCCCTGTCCGCTTACTCTGGGATaGGCAGAGGAAAGTGACTGG | + |
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Preference number: 3 (lower is better) Translates to: KAVLELGCMELSSVCRPCPLTLG*AEESDW Trigger: CCAGTCACTTTCCTCTGCCAATCCCAGAGTAAGCGG...ACAGGGCCTGCAGACTGATGAGAGTTCCATGCACCCCAGCTCAAGAACGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | CTCTGTTGTCCTGCAGCGCCCTCTGATGGCTCTGGGTaGAACTCCGCTTACTCTGGGATTGGCAGAGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LCCPAAPSDGSG*NSAYSGIGRGK Trigger: CTTTCCTCTGCCAATCCCAGAGTAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGACAACAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR GCA 72 bp | ATCGCCAAAAGAATAAAGGCCGTTCTTGAGCTGGGGTaGATGGAACTCTCATCAGTCTGCAGGCCCTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: IAKRIKAVLELG*MELSSVCRPCG Trigger: CCCACAGGGCCTGCAGACTGATGAGAGTTCCATGCACCCCAGCTCAAGAACGGCCTTTATTCTTTTGGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR CCA 72 bp | AGCCATCACAAGCCGTGGACATCATTTAATATCATTTaGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SHHKPWTSFNII*RGSQASPLGSC Trigger: GCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATTAAATGATGTCCACGGCTTGTGATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | ACACAGGAAGCCTGCCAGCGTGAGGTCATTTTAAATTaGAGCTGCCTCAGTGGCCTTAGCCATCACAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: TQEACQREVILN*SCLSGLSHHKP Trigger: CGGCTTGTGATGGCTAAGGCCACTGAGGCAGCTTCAATTTAAAATGACCTCACGCTGGCAGGCTTCCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | CTGAAAGGACACCACCACACAGGAAGCCTGCCAGCGTaGGGTCATTTTAAATTGAAGCTGCCTCAGTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: LKGHHHTGSLPA*GHFKLKLPQWP Trigger: AGGCCACTGAGGCAGCTTCAATTTAAAATGACCTCACGCTGGCAGGCTTCCTGTGTGGTGGTGTCCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | TTCCTGAGACAGAATCTCTTACTGAACCTGCAGCTCTaGTTCAGCAAGTCAGGCTGGCCAGTGAGGCACTGG | + |
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Preference number: 3 (lower is better) Translates to: FLRQNLLLNLQL*FSKSGWPVRHW Trigger: CCAGTGCCTCACTGGCCAGCCTGACTTGCTGAATCAGAGCTGCAGGTTCAGTAAGAGATTCTGTCTCAGGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR GCA 72 bp | GATCCCATAAGAGATGGCTGTGAGCCACCCTGTGGTTaGTGGGAATTGAACTCAGGACCTCTGAAAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: DPIRDGCEPPCG*WELNSGPLKEQ Trigger: CTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAGCCATCTCTTATGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | GTGCCTCCTTATCGCCAAAAGAATAAAGGCCGTTCTTaGGCTGGGGTGCATGGAACTCTCATCAGTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: VPPYRQKNKGRS*AGVHGTLISLQ Trigger: CTGCAGACTGATGAGAGTTCCATGCACCCCAGCTCAAGAACGGCCTTTATTCTTTTGGCGATAAGGAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | CTAGAAGAGGGTATCAGATCCCATAAGAGATGGCTGTaGGCCACCCTGTGGTTGCTGGGAATTGAACTCAGG | + |
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Preference number: 3 (lower is better) Translates to: LEEGIRSHKRWL*ATLWLLGIELR Trigger: CCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAGCCATCTCTTATGGGATCTGATACCCTCTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR TCA 72 bp | AGGACCTCTGAAAGAGCAGGCAATGCTCTTAACGGATaGGCCATCTCTCCAGCCCATCTAAAGTCATTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RTSERAGNALNG*AISPAHLKSFL Trigger: GAGAAATGACTTTAGATGGGCTGGAGAGATGGCTCATCCGTTAAGAGCATTGCCTGCTCTTTCAGAGGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | ACTGGGATCTGCCTGTCTCTCCATGGAGCCACCCCACCACCACCACCCAGCCCCGGAAATGACCGTAACTaGGGGGTGCAGCCGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: TGICLSLHGATPPPPPSPGNDRN*GVQPQT Trigger: AGTCTGCGGCTGCACCCCCCAGTTACGGTCATTTCC...GGGGCTGGGTGGTGGTGGTGGGGTGGCTCCATGGAGAGACAGGCAGATCCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR CAA 72 bp | CAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTaGGACTCAGACAGCAGCCCCAGTCTCTTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QSAGPVGYPERP*DSDSSPSLFSA Trigger: GGCTGAGAAGAGACTGGGGCTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | GGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTCTAATAAACAGCCCTGCGCAGGATCAGCTCTaGCTTCCGGCGAGGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GSQASPLGSCPSFLINSPAQDQL*LPARLL Trigger: AAGGAGCCTCGCCGGAAGCCAGAGCTGATCCTGCGC...AGGGCTGTTTATTAGAAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | TTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTCTAATAAAGCAGGTGTCAGCAGGTaGCGGTGGCGGCTCCATTTC | + |
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Preference number: 4 (lower is better) Translates to: LEGLPGFSPGKLPFISNKAGVSR*RWRLHF Trigger: GAAATGGAGCCGCCACCGCCACCTGCTGACACCTGC...TTTATTAGAAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | AATATCATTTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTAGGCTCCTTGTCACCTaGCAGGACGCGGAAGCGCAG | + |
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Preference number: 4 (lower is better) Translates to: NIIWRGSQASPLGSCPSFRLLVT*QDAEAQ Trigger: CTGCGCTTCCGCGTCCTGCCAGGTGACAAGGAGCCT...AAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR TCA 90 bp | AAGGCCGTTCTTGAGCTGGGGTGCATGGAACTCTCATCAGTCTGCAGGCCCTGTTTGACCATGCTCATGTaGCCCCAAAACCAGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: KAVLELGCMELSSVCRPCLTMLM*PQNQCR Trigger: GCGGCACTGGTTTTGGGGTCACATGAGCATGGTCAA...ACAGGGCCTGCAGACTGATGAGAGTTCCATGCACCCCAGCTCAAGAACGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR TCA 90 bp | GCCAGTAAACGTTGCATTTCTCCTGCTCAAACATCTATAGTGCCTCCTTATCGCAGGGGCCACCGCAGCTaGGGCCTGGAGTATGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ASKRCISPAQTSIVPPYRRGHRS*GLEYGA Trigger: GGCCCCATACTCCAGGCCTCAGCTGCGGTGGCCCCT...GCGATAAGGAGGCACTATAGATGTTTGAGCAGGAGAAATGCAACGTTTACTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | AATATCATTTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTCTGCAGAAGTTGCCATaGGAAGGCAGCTCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NIIWRGSQASPLGSCPSFLQKLP*EGSSRP Trigger: GGGCCTGGAGCTGCCTTCCCATGGCAACTTCTGCAG...AAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | CTGATGGCTCTGGGTGAAACTCCGCTTACTCTGGGATTGGCAGAGGAAAGTGACGTCAGCAGGTGGCGGTaGCGGCTCCATTTCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: LMALGETPLTLGLAEESDVSRWR*RLHFSP Trigger: TGGTGAGAAATGGAGCCGCCACCGCCACCTGCTGAC...GTCACTTTCCTCTGCCAATCCCAGAGTAAGCGGAGTTTCACCCAGAGCCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | GGACTCAGACAGCAGCCCCAGTCTCTTCTCAGCCAAGCTTCCAGACAGCCTCTGATAGACCTCAGGGTCTaGCCAGACTTCAGGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: GLRQQPQSLLSQASRQPLIDLRV*PDFRVV Trigger: CACAACCCTGAAGTCTGGCCAGACCCTGAGGTCTAT...CAGAGGCTGTCTGGAAGCTTGGCTGAGAAGAGACTGGGGCTGCTGTCTGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGACAGCAGCCAATCCAACAGAGGTaGACATCATGGAATTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVCRPCGLPRKALGLRQQPIQQR*TSWNWW Trigger: CCACCAATTCCATGATGTCCACCTCTGTTGGATTGG...CTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGACAGCAGAACTCATCAAGATTTTaGCTGGAGAGAGTGCGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SVCRPCGLPRKALGLRQQNSSRF*LERVRR Trigger: ACGGCGCACTCTCTCCAGCCAAAATCTTGATGAGTT...CTGCTGTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | AATATCATTTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTACCGCAGCTGAGGCCTaGAGTATGGGGCCAATAAAC | + |
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Preference number: 4 (lower is better) Translates to: NIIWRGSQASPLGSCPSFTAAEA*SMGPIN Trigger: GTTTATTGGCCCCATACTCCAGGCCTCAGCTGCGGT...AAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | TTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTCTAATAAACTTCTGTGGGTTTTCTaGGTCGAAGCGGAAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LEGLPGFSPGKLPFISNKLLWVF*VEAEGV Trigger: GACCCCTTCCGCTTCGACCCAGAAAACCCACAGAAG...TTTATTAGAAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| 3UTR CAA 72 bp | AGAGATGGCTGTGAGCCACCCTGTGGTTGCTGGGAATaGAACTCAGGACCTCTGAAAGAGCAGGCAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: RDGCEPPCGCWE*NSGPLKEQAML Trigger: GAGCATTGCCTGCTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAGGGTGGCTCACAGCCATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | GGACTCAGACAGCAGCCCCAGTCTCTTCTCAGCCAAGCTTCCAGACAGCCTCTGACATCATGGAATTGGTaGCTCCTTTCAGTCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: GLRQQPQSLLSQASRQPLTSWNW*LLSVNN Trigger: GTTGTTGACTGAAAGGAGCCACCAATTCCATGATGT...CAGAGGCTGTCTGGAAGCTTGGCTGAGAAGAGACTGGGGCTGCTGTCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | TTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTCTAATAAACCAATAAACTTGGGGTaGATAAGCCTCAGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: LEGLPGFSPGKLPFISNKPINLG*ISLRMG Trigger: CCCCATCCTGAGGCTTATCCACCCCAAGTTTATTGG...TTTATTAGAAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | TTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTCTAATAAACCTTCATCTCCCTCATaGCGAAAGTCTGTCCTATGC | + |
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Preference number: 4 (lower is better) Translates to: LEGLPGFSPGKLPFISNKPSSPS*RKSVLC Trigger: GCATAGGACAGACTTTCGCCATGAGGGAGATGAAGG...TTTATTAGAAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR GCA 90 bp | CTGATGGCTCTGGGTGAAACTCCGCTTACTCTGGGATTGGCAGAGGAAAGTGACCTTTCAGTCAACAACTaGAGGCCTTCCTCGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LMALGETPLTLGLAEESDLSVNN*RPSSLF Trigger: GAACAACGAGGAAGGCCTGCAGTTGTTGACTGAAAG...GTCACTTTCCTCTGCCAATCCCAGAGTAAGCGGAGTTTCACCCAGAGCCATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR GCA 90 bp | AGTGGCCTTAGCCATCACAAGCCGTGGACATCATTTAATATCATTTGGAGGGGCACCAACTGCAGAAGTTaGCATGGGAAGGCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SGLSHHKPWTSFNIIWRGTNCRS*HGKAAP Trigger: TGGAGCTGCCTTCCCATGGCAACTTCTGCAGTTGGT...GCCCCTCCAAATGATATTAAATGATGTCCACGGCTTGTGATGGCTAAGGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CCA 90 bp | AGTGGCCTTAGCCATCACAAGCCGTGGACATCATTTAATATCATTTGGAGGGGCTGGACATCATGGAATTaGTGGCTCCTTTCAGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: SGLSHHKPWTSFNIIWRGWTSWN*WLLSVN Trigger: GTTGACTGAAAGGAGCCACCAATTCCATGATGTCCA...GCCCCTCCAAATGATATTAAATGATGTCCACGGCTTGTGATGGCTAAGGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR TCA 90 bp | TCTATATATGGGTACACTGTAATTGTCTTCAAACACACTAGAAGAGGGTATCAGCCAAGGTCATCAGACTaGTGTGTTCCAACATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SIYGYTVIVFKHTRRGYQPRSSD*CVPTCP Trigger: TGGACATGTTGGAACACATCAGTCTGATGACCTTGG...CTGATACCCTCTTCTAGTGTGTTTGAAGACAATTACAGTGTACCCATATATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS GCA 90 bp | ATCCAGGTCAGAATTCGAGCCAGGAACAAGGAGGCCCCAACCAACTaGAGAAGTTGCCATGGGAAGGCAGCTCCAGGCCCCAGTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: IQVRIRARNKEAPTN*RSCHGKAAPGPSPS Trigger: GCTGGGACTGGGGCCTGGAGCTGCCTTCCCATGGCAACTTCTGCAGTTGGTTGGGGCCTCCTTGTTCCTGGCTCGAATTCTGACCTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165999.2 ENSMUST00000235238.2 ENSMUST00000237003.2 |
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| CDS-3UTR CAA 90 bp | AATATCATTTGGAGGGGCTCCCAGGCTTCTCCCCTGGGAAGCTGCCCTTCATTTAACCAACTGCAGAAGTaGCCATGGGAAGGCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: NIIWRGSQASPLGSCPSFNQLQK*PWEGSS Trigger: GGAGCTGCCTTCCCATGGCAACTTCTGCAGTTGGTT...AAATGAAGGGCAGCTTCCCAGGGGAGAAGCCTGGGAGCCCCTCCAAATGATATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCTGAGACACATACAGACATGGGGAAGCCAGAGGTTTATGTCAGGTGTGAACTCATCAAGATTTaGGCTGGAGAGAGTGCGCCG | + |
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Preference number: 5 (lower is better) Translates to: VCAETHTDMGKPEVYVRCELIKI*AGESAP Trigger: CGGCGCACTCTCTCCAGCCAAAATCTTGATGAGTTC...ACACCTGACATAAACCTCTGGCTTCCCCATGTCTGTATGTGTCTCAGCACACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS CCA 90 bp | AGGGTTTTAGACTTAGTCTTCGACTTCAGGAACTCATCAAGATTTTaGCTGGAGAGAGTGCGCCGTCTCTCCCTGATGACAGCATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RVLDLVFDFRNSSRF*LERVRRLSLMTASV Trigger: CACAGATGCTGTCATCAGGGAGAGACGGCGCACTCTCTCCAGCCAAAATCTTGATGAGTTCCTGAAGTCGAAGACTAAGTCTAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165999.2 ENSMUST00000237003.2 |
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| CDS-3UTR CAA 90 bp | GCCAGTAAACGTTGCATTTCTCCTGCTCAAACATCTATAGTGCCTCCTTATCGCTGCAGGCCTTCCTCGTaGTTCTTGACCATGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: ASKRCISPAQTSIVPPYRCRPSS*FLTMLM Trigger: CATGAGCATGGTCAAGAACAACGAGGAAGGCCTGCA...GCGATAAGGAGGCACTATAGATGTTTGAGCAGGAGAAATGCAACGTTTACTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237003.2 |
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| CDS GCA 72 bp | AGAATTCGAGCCAGGAACAAGGAGGCCCCAACCAACTaGAGAAGTTGCCATGGGAAGGCAGCTCCAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RIRARNKEAPTN*RSCHGKAAPGP Trigger: GGGGCCTGGAGCTGCCTTCCCATGGCAACTTCTGCAGTTGGTTGGGGCCTCCTTGTTCCTGGCTCGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165999.2 ENSMUST00000235238.2 ENSMUST00000237003.2 |
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| CDS CCA 72 bp | GGCCCAATCCAACAGAGGTGGACATCATGGAATTGGTaGCTCCTTTCAGTCAACAACTGCAGGCCTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: GPIQQRWTSWNW*LLSVNNCRPSS Trigger: CGAGGAAGGCCTGCAGTTGTTGACTGAAAGGAGCCACCAATTCCATGATGTCCACCTCTGTTGGATTGGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165999.2 ENSMUST00000235238.2 ENSMUST00000237003.2 |
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| CDS TCA 72 bp | TTTCAGTCAACAACTGCAGGCCTTCCTCGTTGTTCTTaGCCATGCTCATGTGACCCCAAAACCAGTGCCGCG | + |
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Preference number: 6 (lower is better) Translates to: FQSTTAGLPRCS*PCSCDPKTSAA Trigger: CGCGGCACTGGTTTTGGGGTCACATGAGCATGGTCAAGAACAACGAGGAAGGCCTGCAGTTGTTGACTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165999.2 ENSMUST00000235238.2 ENSMUST00000237003.2 |
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| CDS CAA 72 bp | GAAGGGCCCAATCCAACAGAGGTGGACATCATGGAATaGGTGGCTCCTTTCAGTCAACAACTGCAGGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: EGPNPTEVDIME*VAPFSQQLQAF Trigger: GAAGGCCTGCAGTTGTTGACTGAAAGGAGCCACCAATTCCATGATGTCCACCTCTGTTGGATTGGGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165999.2 ENSMUST00000235238.2 ENSMUST00000237003.2 |
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| CDS CCA 72 bp | GACTTAGTCTTCGACTTCAGGAACTCATCAAGATTTTaGCTGGAGAGAGTGCGCCGTCTCTCCCTGATGACA | + |
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Preference number: 6 (lower is better) Translates to: DLVFDFRNSSRF*LERVRRLSLMT Trigger: TGTCATCAGGGAGAGACGGCGCACTCTCTCCAGCCAAAATCTTGATGAGTTCCTGAAGTCGAAGACTAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165999.2 ENSMUST00000237003.2 |
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| CDS CAA 72 bp | AGACTTAGTCTTCGACTTCAGGAACTCATCAAGATTTaGGCTGGAGAGAGTGCGCCGTCTCTCCCTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: RLSLRLQELIKI*AGESAPSLPDD Trigger: GTCATCAGGGAGAGACGGCGCACTCTCTCCAGCCAAAATCTTGATGAGTTCCTGAAGTCGAAGACTAAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165999.2 ENSMUST00000237003.2 |
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| CDS CAA 90 bp | CAGGGTTTTAGACTTAGTCTTCGACTTCAGGAACTCATCAAGATTTaGGCTGGAGAGAGTGCGCCGTCTCTCCCTGATGACAGCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: QGFRLSLRLQELIKI*AGESAPSLPDDSIC Trigger: ACAGATGCTGTCATCAGGGAGAGACGGCGCACTCTCTCCAGCCAAAATCTTGATGAGTTCCTGAAGTCGAAGACTAAGTCTAAAACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165999.2 ENSMUST00000237003.2 |
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| CDS GCA 72 bp | ACATCATGGAATTGGTGGCTCCTTTCAGTCAACAACTaGAGGCCTTCCTCGTTGTTCTTGACCATGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: TSWNWWLLSVNN*RPSSLFLTMLM Trigger: CATGAGCATGGTCAAGAACAACGAGGAAGGCCTGCAGTTGTTGACTGAAAGGAGCCACCAATTCCATGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165999.2 ENSMUST00000235238.2 ENSMUST00000237003.2 |
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| CDS GCA 72 bp | ATGTCCAGACAGGCAGTTCCTTTGGTGGTCAGACGCTaGCACTTGGCATGCATGATGTTCACACTCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: MSRQAVPLVVRR*HLACMMFTLLL Trigger: TAATAAGAGTGTGAACATCATGCATGCCAAGTGGCAGCGTCTGACCACCAAAGGAACTGCCTGTCTGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165999.2 ENSMUST00000237003.2 |
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