Pregenerated sensors for CYP4F16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048440Ensembl transcript IDs: ENSMUST00000003416.15, ENSMUST00000165515.8, ENSMUST00000169252.8, ENSMUST00000169591.8, ENSMUST00000237245.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTaGGCTACCCAGAAAGGCCCTTGGACTCAGAAAGCAGCCCCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LELGCMQLFISLQAL*ATQKGPWTQKAAPD Trigger: GTCTGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR CCA 90 bp | CTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTaGACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: LFISLQALWATQKGP*TQKAAPDFSQPGFQ Trigger: CTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR TCA 90 bp | CTCAGCCAGGCTTCCAGACAGTCTCTGTTATCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTCCGCTTATTCTGGGATTGGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: LSQASRQSLLSCSAL*WLWVKLRLFWDWQR Trigger: CCTTTGCCAATCCCAGAATAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGATAACAGAGACTGTCTGGAAGCCTGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR CCA 90 bp | AGAGTCTTAGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTTaGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACAGCATCTGTG | + |
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Preference number: 1 (lower is better) Translates to: RVLDLVLDFKNSSWF*LERVCRLSLMTASV Trigger: CACAGATGCTGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | CGCAGCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTGGCTTCCGGCGCGGCTCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: RSHNPPSARRIISGFRRGSCSAL*WLWVKL Trigger: GAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGA...GCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | CCCGCAGCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTGGCTTCCGGCGCGGAGGAACAGGGAAAATaGCTGAACACTAGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: PAATTRPPPAGLSLASGAEEQGK*LNTRVI Trigger: GATTACTCTAGTGTTCAGCCATTTTCCCTGTTCCTC...CGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGCTGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCATCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: TLHQSAGPVGYPERPLDSSCSAL*WLWVKL Trigger: GAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGA...TGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTGGCTTCCGGCGCGGCTCTCAAACATCTATGGTaGCTCCCTATCGCTAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: AATTRPPPAGLSLASGAALKHLW*LPIAKR Trigger: TCTTTTAGCGATAGGGAGGCACCATAGATGTTTGAG...AGCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGGAGCCTGGAGCCAGCTaGAGGCATAGTCTCCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: ELGCMQLFISLQALWATQEPGAS*RHSLLN Trigger: ATTCAGGAGACTATGCCTGCAGCTGGCTCCAGGCTC...CTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCCGAAAGTCTGTCCTATaGAGTTCCTGGGCCCGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSWGACNSSSVCRPCGLPRKSVL*SSWARQ Trigger: CTGCCGGGCCCAGGAACTGCATAGGACAGACTTTCG...GGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTGGCTTCCGGCGCGGCTCCTAAACTCCGCTTATTCTaGGATTGGCAAAGGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: ATTRPPPAGLSLASGAAPKLRLF*DWQRKV Trigger: CACTTTCCTTTGCCAATCCCAGAATAAGCGGAGTTT...AGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGAAAGCAGCCCCAGAGGGTCTGGCCAGACTaGTGGATTGTGATGAATACC | + |
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Preference number: 2 (lower is better) Translates to: CRPCGLPRKALGLRKQPQRVWPD*WIVMNT Trigger: GGTATTCATCACAATCCATCAGTCTGGCCAGACCCT...CTGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCAGGATTATCTCTGGCTTCCGGCGCGGCTCCTTGTCATCAGGCAGGATGCGTTGAGCTGGGGTGCATaGAACTCTTCATCAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PQDYLWLPARLLVIRQDALSWGA*NSSSVC Trigger: GCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAA...CGCATCCTGCCTGATGACAAGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCAGGATTATCTCTGGCTTCCGGCGCGGCTCCTTGTCATCAGGCAGGATGCGAGCAAAGTCAAGGTCTaGCTCAGCCTGCTTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: PQDYLWLPARLLVIRQDASKVKV*LSLLQT Trigger: AGTCTGAAGCAGGCTGAGCCAGACCTTGACTTTGCT...CGCATCCTGCCTGATGACAAGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGACCCAGAAAGGCCCTTaGACTCAGAAAGCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: WGACNSSSVCRPCGLPRKTQKGP*TQKAAP Trigger: TGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGT...CTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTTGTAACTTCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: GSACFRLVGGYMPVNLVTSCSAL*WLWVKL Trigger: GAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGA...AGTTACAAGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGAAAGCAGCCCCAAAACTCCGCTTATTCTaGGATTGGCAAAGGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: LQALWATQKGPWTQKAAPKLRLF*DWQRKV Trigger: CACTTTCCTTTGCCAATCCCAGAATAAGCGGAGTTT...TGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTTGTAACTGCAGGCATAGTCTCCTaGATAGCTCTGGGGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: GSACFRLVGGYMPVNLVTAGIVS*IALGPL Trigger: GAGAGGCCCCAGAGCTATTCAGGAGACTATGCCTGC...AGTTACAAGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCCTCTCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTC | + |
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Preference number: 2 (lower is better) Translates to: GYMPVNLVTLLLKHLWCLSCSAL*WLWVKL Trigger: GAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGA...GAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTCATCATGGTTTTGGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACAGCTTTCCAGACGTGCACTaGCTTCCGAGGATAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ELIMVLAGESVPSLPNDSFPDVH*LPRIGA Trigger: AGCACCTATCCTCGGAAGGCAGTGCACGTCTGGAAA...GCTGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTATCTGGCTGGAGAGAGTGTaGCGTCTCTCCCTAATGACA | + |
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Preference number: 2 (lower is better) Translates to: QKAAPDFSQPGFQTVSVIWLERV*RLSLMT Trigger: TGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCA...GATAACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGGGAAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGCTGCTCAAACATCTATaGTGCCTCCCTATCGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: RRGSPFPPIQFGAWSQLQLLKHL*CLPIAK Trigger: TTTAGCGATAGGGAGGCACCATAGATGTTTGAGCAG...CTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTTCCCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGCCTGGAGCCAGCTGCAGGCATAGTCTCCTGAATAGCTCTGGGGCCTCTGAGGAACAGGGAAAATaGCTGAACACTAGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: LEPGASCRHSLLNSSGASEEQGK*LNTRVI Trigger: GATTACTCTAGTGTTCAGCCATTTTCCCTGTTCCTC...AGAGGCCCCAGAGCTATTCAGGAGACTATGCCTGCAGCTGGCTCCAGGCTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTCTGGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTTTGAGCTGGGGTGCATaGAACTCTTCATCAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KVWLSLLQTCGRLHASKPLSWGA*NSSSVC Trigger: GCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAA...AGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCCAGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTAGCAAAGTCAAGGTCTaGCTCAGCCTGCTTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: TQKAAPDFSQPGFQTVSVSKVKV*LSLLQT Trigger: AGTCTGAAGCAGGCTGAGCCAGACCTTGACTTTGCT...AACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCTTCCATGTTCATCCTTaGCCAACAAGAGAACATCAA | + |
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Preference number: 2 (lower is better) Translates to: LSWGACNSSSVCRPCGLPFHVHP*PTREHQ Trigger: TTGATGTTCTCTTGTTGGCCAAGGATGAACATGGAA...GGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | CAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCCATTCCCACCGCAGGCATAGTCTCCTaGATAGCTCTGGGGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QMFNGECAYKKEGKPIPTAGIVS*IALGPL Trigger: GAGAGGCCCCAGAGCTATTCAGGAGACTATGCCTGC...GGTGGGAATGGGCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTTGTAACTTTGAGCTGGGGTGCATaGAACTCTTCATCAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: GSACFRLVGGYMPVNLVTLSWGA*NSSSVC Trigger: GCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAA...AGTTACAAGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | AATACCAAAGATGCTGATGACACAGATGTTCCCTTTAGGGATGACCCGGCCATCTTTCCAGACGTGCACTaGCTTCCGAGGATAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: NTKDADDTDVPFRDDPAIFPDVH*LPRIGA Trigger: AGCACCTATCCTCGGAAGGCAGTGCACGTCTGGAAA...GATGGCCGGGTCATCCCTAAAGGGAACATCTGTGTCATCAGCATCTTTGGTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | TCATCATGGTTTTGGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACAGCATCTGAGACTCCTGACAGTTaGTGTCAAAGCCAAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSWFWLERVCRLSLMTASETPDS*CQSQRG Trigger: GCCTCTTTGGCTTTGACAGCAACTGTCAGGAGTCTC...AGATGCTGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGGCATAGAGGAACAGGGAAAATaGCTGAACACTAGAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: GKPIPTNSIWSLEPAAGIEEQGK*LNTRVI Trigger: GATTACTCTAGTGTTCAGCCATTTTCCCTGTTCCTC...TATGCCTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGACGAACAAGAAGAGCTaGAGTGACCTTTTTATTATG | + |
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Preference number: 2 (lower is better) Translates to: WGACNSSSVCRPCGLPRKTNKKS*SDLFIM Trigger: CATAATAAAAAGGTCACTTCAGCTCTTCTTGTTCGT...CTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAACTCATCATGGTTTTGGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACATGCTTCCACTTGGCGTaGATGATGTTCACACTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KNSSWFWLERVCRLSLMTCFHLA*MMFTLW Trigger: CCAGAGTGTGAACATCATGCACGCCAAGTGGAAGCA...TGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCCTCTTTCCAGACGTGCACTaGCTTCCGAGGATAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: GYMPVNLVTLLLKHLWCLFPDVH*LPRIGA Trigger: AGCACCTATCCTCGGAAGGCAGTGCACGTCTGGAAA...GAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAACTCATCATGGTTTTGGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACAGAGACTCCTGACAGTTaGTGTCAAAGCCAAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: KNSSWFWLERVCRLSLMTETPDS*CQSQRG Trigger: GCCTCTTTGGCTTTGACAGCAACTGTCAGGAGTCTC...TGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGATGCTGATGACACAGATGTTCCCTTTAGGGATGACCCGGCCATCAGGTCTGCTCAAACATCTATaGTGCCTCCCTATCGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: PKMLMTQMFPLGMTRPSGLLKHL*CLPIAK Trigger: TTTAGCGATAGGGAGGCACCATAGATGTTTGAGCAG...ACCTGATGGCCGGGTCATCCCTAAAGGGAACATCTGTGTCATCAGCATCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTCTGGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTCTCAAACATCTATGGTaGCTCCCTATCGCTAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: KVWLSLLQTCGRLHASKPLKHLW*LPIAKR Trigger: TCTTTTAGCGATAGGGAGGCACCATAGATGTTTGAG...AGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCCAGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCCATTCCCACCAATTGAGCCTGGAGCCAGCTaGAGGCATAGTCTCCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: CLMENALIKRRGSPFPPIEPGAS*RHSLLN Trigger: ATTCAGGAGACTATGCCTGCAGCTGGCTCCAGGCTC...AATTGGTGGGAATGGGCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCCTCAGCAAAGTCAAGGTCTaGCTCAGCCTGCTTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: GYMPVNLVTLLLKHLWCLSKVKV*LSLLQT Trigger: AGTCTGAAGCAGGCTGAGCCAGACCTTGACTTTGCT...GAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR CAA 90 bp | CAGAGTCTTAGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTaGGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACAGCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: QSLRLSLGLQELIMV*AGESVPSLPNDSIC Trigger: ACAGATGCTGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAGACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTATAAACTCCGCTTATTCTaGGATTGGCAAAGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: SESSPRLFSARLPDSLCYKLRLF*DWQRKV Trigger: CACTTTCCTTTGCCAATCCCAGAATAAGCGGAGTTT...ATAACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTATGTTTAATGGAGAATaGGCTTATAAAAAGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: TQKAAPDFSQPGFQTVSVMFNGE*AYKKEG Trigger: CCCCTCCTTTTTATAAGCGCATTCTCCATTAAACAT...AACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGTCTTAGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTTGGCTGGAGGTTCTTGAGCTGGGGTaGATGCAACTCTTCATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: RVLDLVLDFKNSSWFWLEVLELG*MQLFIS Trigger: ACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAAC...CTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCCTCCTCAAACATCTATGGTaGCTCCCTATCGCTAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GYMPVNLVTLLLKHLWCLLKHLW*LPIAKR Trigger: TCTTTTAGCGATAGGGAGGCACCATAGATGTTTGAG...GAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGAGGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGAAACTCCGCTTATTCTaGGATTGGCAAAGGAAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: GRLHASKPCNSPAQTSMVKLRLF*DWQRKV Trigger: CACTTTCCTTTGCCAATCCCAGAATAAGCGGAGTTT...CACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACCTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCCATTCCCACCAATTAACTCATCATGGTTTTaGCTGGAGAGAGTGTGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: CLMENALIKRRGSPFPPINSSWF*LERVCR Trigger: ACGGCACACTCTCTCCAGCCAAAACCATGATGAGTT...AATTGGTGGGAATGGGCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCAAGGTTCAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCGTTCTTGAGCTGGGGTaGATGCAACTCTTCATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: CSRFKCLMENALIKRRGSVLELG*MQLFIS Trigger: ACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAAC...GCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTGAACCTTGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCAAGGTTCAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCACCGTAGCAGTATCTTaGAGAGGAACAGGGAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: CSRFKCLMENALIKRRGSTVAVS*RGTGKM Trigger: CATTTTCCCTGTTCCTCTTCAAGATACTGCTACGGT...GCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTGAACCTTGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR TCA 90 bp | AGAGTCTTAGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTTGGCTGGAGCAAGAAGAGCTGAAGTaGCCTTTTTATTATGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RVLDLVLDFKNSSWFWLEQEELK*PFYYEG Trigger: TCCCTCATAATAAAAAGGTCACTTCAGCTCTTCTTG...CTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAGACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCAAGGTTCAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCTCAAACATCTATGGTaGCTCCCTATCGCTAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CSRFKCLMENALIKRRGSLKHLW*LPIAKR Trigger: TCTTTTAGCGATAGGGAGGCACCATAGATGTTTGAG...GCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTGAACCTTGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTGGCTTCCGGCGCGGCACCAGGTCACAGGCCTaGCGGAAGCGCCGCCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: RSHNPPSARRIISGFRRGTRSQA*RKRRPS Trigger: TGATGGGCGGCGCTTCCGCAAGGCCTGTGACCTGGT...GCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGCTGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
||
| 3UTR CCA 72 bp | CAGCCACAACCCGCCCTCCGCCCGCAGGATTATCTCTaGCTTCCGGCGCGGCTCCTTGTCATCAGGCAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QPQPALRPQDYL*LPARLLVIRQD Trigger: ATCCTGCCTGATGACAAGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGGGCGGAGGGCGGGTTGTGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGAAAGCAGCCCCAGTACCCAGAAAGGCCCTaGGACTCAGAAAGCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CRPCGLPRKALGLRKQPQYPERP*DSESSP Trigger: GGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTA...CTGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGCAGGATTATCTCTGGCTTCCGGCGCGGCTCCTTGTCATCAGGCAGGATGCGGATAGGTGCTTCCACTaGGCGTGCATGATGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: PQDYLWLPARLLVIRQDADRCFH*ACMMFT Trigger: TGTGAACATCATGCACGCCAAGTGGAAGCACCTATC...CGCATCCTGCCTGATGACAAGGAGCCGCGCCGGAAGCCAGAGATAATCCTGCGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
||
| 3UTR CCA 72 bp | AGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTaGACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SLQALWATQKGP*TQKAAPDFSQP Trigger: TGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR TCA 72 bp | ATTTGGAGCCTGGAGCCAGCTGCAGGCATAGTCTCCTaGATAGCTCTGGGGCCTCTCAGCACCGTAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: IWSLEPAAGIVS*IALGPLSTVAV Trigger: TACTGCTACGGTGCTGAGAGGCCCCAGAGCTATTCAGGAGACTATGCCTGCAGCTGGCTCCAGGCTCCAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR TCA 72 bp | GCTTCCAGACAGTCTCTGTTATCCTGCAGCGCCCTCTaGTGGCTCTGGGTGAAACTCCGCTTATTCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: ASRQSLLSCSAL*WLWVKLRLFWD Trigger: ATCCCAGAATAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGATAACAGAGACTGTCTGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTATCTCCCACCAATTCAATTaGGAGCCTGGAGCCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QKAAPDFSQPGFQTVSVISHQFN*EPGASC Trigger: GCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGA...GATAACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR TCA 72 bp | CTCTGTTATCCTGCAGCGCCCTCTGATGGCTCTGGGTaGAACTCCGCTTATTCTGGGATTGGCAAAGGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LCYPAAPSDGSG*NSAYSGIGKGK Trigger: CTTTCCTTTGCCAATCCCAGAATAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGATAACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR GCA 72 bp | AACATTTCCAGACGTGCACTGCCTTCCGAGGATAGGTaGTTCCACTTGGCGTGCATGATGTTCACACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NISRRALPSEDR*FHLACMMFTLW Trigger: CCAGAGTGTGAACATCATGCACGCCAAGTGGAAGCACCTATCCTCGGAAGGCAGTGCACGTCTGGAAATGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGCACCGTAGCAGTATCTaGAAGAGGAACAGGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: WGACNSSSVCRPCGLPRKHRSSI*KRNREN Trigger: ATTTTCCCTGTTCCTCTTCAAGATACTGCTACGGTG...CTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGGCATAGTCGATAGGTGCTTCCACTaGGCGTGCATGATGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: KPIPTNSIWSLEPAAGIVDRCFH*ACMMFT Trigger: TGTGAACATCATGCACGCCAAGTGGAAGCACCTATC...GACTATGCCTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165515.8 ENSMUST00000237245.2 |
||
| 3UTR GCA 72 bp | ATCGCTAAAAGAATAAAGGCCGTTCTTGAGCTGGGGTaGATGCAACTCTTCATCAGTCTGCAGGCCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IAKRIKAVLELG*MQLFISLQALW Trigger: CCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAACGGCCTTTATTCTTTTAGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CAA 90 bp | CAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCCATTCCCACCTACCCAGAAAGGCCCTaGGACTCAGAAAGCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QMFNGECAYKKEGKPIPTYPERP*DSESSP Trigger: GGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTA...GGTGGGAATGGGCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CAA 90 bp | GGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCCTCTCCCACCAATTCAATTaGGAGCCTGGAGCCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GYMPVNLVTLLLKHLWCLSHQFN*EPGASC Trigger: GCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGA...GAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTTGTAACTCACCGTAGCAGTATCTaGAAGAGGAACAGGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GSACFRLVGGYMPVNLVTHRSSI*KRNREN Trigger: ATTTTCCCTGTTCCTCTTCAAGATACTGCTACGGTG...AGTTACAAGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCAAGGTTCAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCTACCCAGAAAGGCCCTaGGACTCAGAAAGCAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSRFKCLMENALIKRRGSYPERP*DSESSP Trigger: GGGGCTGCTTTCTGAGTCCAAGGGCCTTTCTGGGTA...GCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTGAACCTTGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
||
| 3UTR CCA 72 bp | GACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTTaGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGACA | + |
|
Preference number: 3 (lower is better) Translates to: DLVLDFKNSSWF*LERVCRLSLMT Trigger: TGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| 3UTR-3UTR CAA 90 bp | CTTAGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTTGGCTGGAGAGAGTGATAGGTGCTTCCACTaGGCGTGCATGATGTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LRLSLGLQELIMVLAGESDRCFH*ACMMFT Trigger: TGTGAACATCATGCACGCCAAGTGGAAGCACCTATC...ACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| CDS-3UTR GCA 90 bp | TTCTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCAGGTCACAGGCCTTaGGGAAGCGCCGCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSWGACNSSSVCRPCGLPGHRP*GSAAHQ Trigger: CTGATGGGCGGCGCTTCCGCAAGGCCTGTGACCTGG...TAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTGCACAATGTCCCGGGTaGAGCGGCGGAGGAGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VLELGCMQLFISLQALWAAQCPG*SGGGGL Trigger: TAGACCTCCTCCGCCGCTGCACCCGGGACATTGTGC...AGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTCCAGGTCACAGGCCTTaGGGAAGCGCCGCCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQKAAPDFSQPGFQTVSVPGHRP*GSAAHQ Trigger: CTGATGGGCGGCGCTTCCGCAAGGCCTGTGACCTGG...AACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCCTGGAGCCAGCTGCAGGCATAGTCTCCTGAATAGCTCTGGGGCCTCTTGGCTGGAGAGAGTGTaGCGTCTCTCCCTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LEPGASCRHSLLNSSGASWLERV*RLSLMT Trigger: TGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCA...AGAGGCCCCAGAGCTATTCAGGAGACTATGCCTGCAGCTGGCTCCAGGCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTGCACAATGTCCCGGGTaGAGCGGCGGAGGAGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TQKAAPDFSQPGFQTVSVAQCPG*SGGGGL Trigger: TAGACCTCCTCCGCCGCTGCACCCGGGACATTGTGC...AACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | GGACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGCGAAAGTCTGTCCTATaGAGTTCCTGGGCCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLRKQPQTFLSQASRQSLRKSVL*SSWARQ Trigger: CTGCCGGGCCCAGGAACTGCATAGGACAGACTTTCG...CAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTTGGCTGGAGAGAGTGTaGCGTCTCTCCCTAATGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLELGCMQLFISLQALWAWLERV*RLSLMT Trigger: TGTCATTAGGGAGAGACGGCACACTCTCTCCAGCCA...AGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCGCCCTCTGATGGCTCTGGGTGAAACTCCGCTTATTCTGGGATTGGCACAGCACAGGGATCACTaGTCCCAGCCAAAAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LQRPLMALGETPLILGLAQHRDH*SQPKEM Trigger: CATCTCTTTTGGCTGGGACCAGTGATCCCTGTGCTG...TGCCAATCCCAGAATAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAGCGCCCTCTGATGGCTCTGGGTGAAACTCCGCTTATTCTGGGATTGGCAGAGACTCCTGACAGTTaGTGTCAAAGCCAAAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQRPLMALGETPLILGLAETPDS*CQSQRG Trigger: GCCTCTTTGGCTTTGACAGCAACTGTCAGGAGTCTC...TGCCAATCCCAGAATAAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAGGTCTGGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACGAAAGTCTGTCCTATaGAGTTCCTGGGCCCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VKVWLSLLQTCGRLHASKRKSVL*SSWARQ Trigger: CTGCCGGGCCCAGGAACTGCATAGGACAGACTTTCG...TTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCCAGACCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR CCA 90 bp | TTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAGAAAAAATGTCATGTCCTTTaGGGCCACCAAAGCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FISLQALWATQKGPWTQKKCHVL*GHQSWG Trigger: GCCCCAGCTTTGGTGGCCCCAAAGGACATGACATTT...TTTCTGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGGCATAGTTTTCCAGACGTGCACTaGCTTCCGAGGATAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAHSHQFNLEPGASCRHSFPDVH*LPRIGA Trigger: AGCACCTATCCTCGGAAGGCAGTGCACGTCTGGAAA...ACTATGCCTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGGCATAGTAAGAGCCCATCCCCATaGCCAAGTGACCTGAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: EAHSHQFNLEPGASCRHSKSPSP*PSDLKT Trigger: GGTTTTCAGGTCACTTGGGCATGGGGATGGGCTCTT...ACTATGCCTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237245.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTCTCTGTTATCCTGCAGCGCCCTCTGATGGCTCTGGGTGAAACTCCGCTTTCCAGGCAAGGATTCTaGCCAAAATCCAGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVSVILQRPLMALGETPLSRQGF*PKSRKP Trigger: TGGCTTCCTGGATTTTGGCCAGAATCCTTGCCTGGA...AAGCGGAGTTTCACCCAGAGCCATCAGAGGGCGCTGCAGGATAACAGAGACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| CDS-3UTR CCA 90 bp | ACATTTCCAGACGTGCACTGCCTTCCGAGGATAGGTGCTTCCACTTGGCGTGCATCCAGGCAAGGATTCTaGCCAAAATCCAGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TFPDVHCLPRIGASTWRASRQGF*PKSRKP Trigger: TGGCTTCCTGGATTTTGGCCAGAATCCTTGCCTGGA...TGCACGCCAAGTGGAAGCACCTATCCTCGGAAGGCAGTGCACGTCTGGAAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGCCCTTGGACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCATCCAGGCAAGGATTCTaGCCAAAATCCAGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ERPLDSESSPRLFSARLPSRQGF*PKSRKP Trigger: TGGCTTCCTGGATTTTGGCCAGAATCCTTGCCTGGA...TGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGTCCAAGGGCCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| CDS-3UTR CCA 90 bp | AAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGGCATAGTCAAATGTCATGTCCTTTaGGGCCACCAAAGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: KPIPTNSIWSLEPAAGIVKCHVL*GHQSWG Trigger: GCCCCAGCTTTGGTGGCCCCAAAGGACATGACATTT...GACTATGCCTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR GCA 90 bp | GGACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGCATTGCTCTGGATCATaGCCAAGTGACCTGAAAACC | + |
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Preference number: 4 (lower is better) Translates to: GLRKQPQTFLSQASRQSLHCSGS*PSDLKT Trigger: GGTTTTCAGGTCACTTGGGCATGATCCAGAGCAATG...CAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CCA 90 bp | TTCTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGCCAAAAGAGATaGACATCTTGGAAAGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FLSWGACNSSSVCRPCGLPSQKR*TSWKVW Trigger: CCAGACTTTCCAAGATGTCCATCTCTTTTGGCTGGG...TAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR TCA 90 bp | ACTCAGAAAGCAGCCCCAGACTTTTCTCAGCCAGGCTTCCAGACAGTCTCTGTTAGGGTCTGGCCAGACTaGTGGATTGTGATGAATACC | + |
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Preference number: 4 (lower is better) Translates to: TQKAAPDFSQPGFQTVSVRVWPD*WIVMNT Trigger: GGTATTCATCACAATCCATCAGTCTGGCCAGACCCT...AACAGAGACTGTCTGGAAGCCTGGCTGAGAAAAGTCTGGGGCTGCTTTCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR GCA 90 bp | GTCAAGGTCTGGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAAGAGACTCCTGACAGTTaGTGTCAAAGCCAAAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VKVWLSLLQTCGRLHASKETPDS*CQSQRG Trigger: GCCTCTTTGGCTTTGACAGCAACTGTCAGGAGTCTC...TTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCCAGACCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR GCA 90 bp | CTTGGACTTCAAGAACTCATCATGGTTTTGGCTGGAGAGAGTGTGCCGTCTCTCAAGAGCCCATCCCCATaGCCAAGTGACCTGAAAACC | + |
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Preference number: 4 (lower is better) Translates to: LGLQELIMVLAGESVPSLKSPSP*PSDLKT Trigger: GGTTTTCAGGTCACTTGGGCATGGGGATGGGCTCTT...GAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| CDS-3UTR TCA 90 bp | AGGAGGGGAAGCCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGCAAGAAGAGCTGAAGTaGCCTTTTTATTATGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RRGSPFPPIQFGAWSQLQQEELK*PFYYEG Trigger: TCCCTCATAATAAAAAGGTCACTTCAGCTCTTCTTG...CTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGGCTTCCCCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR TCA 90 bp | TTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCACGAACAAGAAGAGCTaGAGTGACCTTTTTATTATG | + |
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Preference number: 4 (lower is better) Translates to: LSWGACNSSSVCRPCGLPTNKKS*SDLFIM Trigger: CATAATAAAAAGGTCACTTCAGCTCTTCTTGTTCGT...GGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CCA 90 bp | GTTCTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTTTCCATGTTCATCCTTaGCCAACAAGAGAACATCAA | + |
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Preference number: 4 (lower is better) Translates to: VLELGCMQLFISLQALWAFHVHP*PTREHQ Trigger: TTGATGTTCTCTTGTTGGCCAAGGATGAACATGGAA...AGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR TCA 90 bp | ACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCAACGAACAAGAAGAGCTaGAGTGACCTTTTTATTATG | + |
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Preference number: 4 (lower is better) Translates to: TLHQSAGPVGYPERPLDSTNKKS*SDLFIM Trigger: CATAATAAAAAGGTCACTTCAGCTCTTCTTGTTCGT...TGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CCA 90 bp | GGGAGGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCAGCACAGGGATCACTaGTCCCAGCCAAAAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GRLHASKPCNSPAQTSMVQHRDH*SQPKEM Trigger: CATCTCTTTTGGCTGGGACCAGTGATCCCTGTGCTG...CACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CCA 90 bp | CCCATTCCCACCAATTCAATTTGGAGCCTGGAGCCAGCTGCAGGCATAGTCTCCTTCCATGTTCATCCTTaGCCAACAAGAGAACATCAA | + |
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Preference number: 4 (lower is better) Translates to: PIPTNSIWSLEPAAGIVSFHVHP*PTREHQ Trigger: TTGATGTTCTCTTGTTGGCCAAGGATGAACATGGAA...GGAGACTATGCCTGCAGCTGGCTCCAGGCTCCAAATTGAATTGGTGGGAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR GCA 90 bp | GGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGCCTCTGCTTCCACTTGGCGTaGATGATGTTCACACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GYMPVNLVTLLLKHLWCLCFHLA*MMFTLW Trigger: CCAGAGTGTGAACATCATGCACGCCAAGTGGAAGCA...GAGGCACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR GCA 90 bp | CTTAGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTTGGCTGGAGAGAGTGGGGCCACCAAAGCATaGCCAAGTGACCTGAAAACC | + |
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Preference number: 4 (lower is better) Translates to: LRLSLGLQELIMVLAGESGATKA*PSDLKT Trigger: GGTTTTCAGGTCACTTGGGCATGCTTTGGTGGCCCC...ACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165515.8 |
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| CDS-3UTR TCA 90 bp | AAGGTCTGGCTCAGCCTGCTTCAGACTTGTGGGAGGTTACATGCCAGTAAACCTCAAGAAGAGCTGAAGTaGCCTTTTTATTATGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KVWLSLLQTCGRLHASKPQEELK*PFYYEG Trigger: TCCCTCATAATAAAAAGGTCACTTCAGCTCTTCTTG...AGGTTTACTGGCATGTAACCTCCCACAAGTCTGAAGCAGGCTGAGCCAGACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CCA 90 bp | CAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCCATTCCCACCTCCAGGCAAGGATTCTaGCCAAAATCCAGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: QMFNGECAYKKEGKPIPTSRQGF*PKSRKP Trigger: TGGCTTCCTGGATTTTGGCCAGAATCCTTGCCTGGA...GGTGGGAATGGGCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| 3UTR CAA 72 bp | AGACTTAGTCTTGGACTTCAAGAACTCATCATGGTTTaGGCTGGAGAGAGTGTGCCGTCTCTCCCTAATGAC | + |
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Preference number: 4 (lower is better) Translates to: RLSLGLQELIMV*AGESVPSLPND Trigger: GTCATTAGGGAGAGACGGCACACTCTCTCCAGCCAAAACCATGATGAGTTCTTGAAGTCCAAGACTAAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000237245.2 |
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| CDS-3UTR GCA 90 bp | TGTTCAAGGTTCAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCTGCTTCCACTTGGCGTaGATGATGTTCACACTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CSRFKCLMENALIKRRGSCFHLA*MMFTLW Trigger: CCAGAGTGTGAACATCATGCACGCCAAGTGGAAGCA...GCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTGAACCTTGAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR GCA 90 bp | TGTTCAAGGTTCAAATGTTTAATGGAGAATGCGCTTATAAAAAGGAGGGGAAGCCATTGCTCTGGATCATaGCCAAGTGACCTGAAAACC | + |
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Preference number: 4 (lower is better) Translates to: CSRFKCLMENALIKRRGSHCSGS*PSDLKT Trigger: GGTTTTCAGGTCACTTGGGCATGATCCAGAGCAATG...GCTTCCCCTCCTTTTTATAAGCGCATTCTCCATTAAACATTTGAACCTTGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS GCA 90 bp | AGGATTCTGGCCAAAATCCAGGAAGCCACTCCAAGCAGCAGAAGATaGCATGACGAGGTCACCACAGAGCCCAGGTCCAGCCCAGACACA | + |
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Preference number: 5 (lower is better) Translates to: RILAKIQEATPSSRR*HDEVTTEPRSSPDT Trigger: TGTGTCTGGGCTGGACCTGGGCTCTGTGGTGACCTCGTCATGGCATCTTCTGCTGCTTGGAGTGGCTTCCTGGATTTTGGCCAGAATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| CDS-3UTR CAA 90 bp | ACTCTTCATCAGTCTGCAGGCCCTGTGGGCTACCCAGAAAGGCCCTTGGACTCATGCATGCCTTCCTCATaGCTCTGGATCATGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TLHQSAGPVGYPERPLDSCMPSS*LWIMPK Trigger: CTTGGGCATGATCCAGAGCAATGAGGAAGGCATGCA...TGAGTCCAAGGGCCTTTCTGGGTAGCCCACAGGGCCTGCAGACTGATGAAGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CAA 90 bp | CCAGGCTTCCAGACAGTCTCTGTTATCCTGCAGCGCCCTCTGATGGCTCTGGGTAAAGAGATGGACATCTaGGAAAGTCTGGCCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: PGFQTVSVILQRPLMALGKEMDI*ESLAHF Trigger: GAAATGGGCCAGACTTTCCAAGATGTCCATCTCTTT...ACCCAGAGCCATCAGAGGGCGCTGCAGGATAACAGAGACTGTCTGGAAGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CAA 90 bp | GTTCTTGAGCTGGGGTGCATGCAACTCTTCATCAGTCTGCAGGCCCTGTGGGCTAAAGAGATGGACATCTaGGAAAGTCTGGCCCATTTC | + |
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Preference number: 5 (lower is better) Translates to: VLELGCMQLFISLQALWAKEMDI*ESLAHF Trigger: GAAATGGGCCAGACTTTCCAAGATGTCCATCTCTTT...AGCCCACAGGGCCTGCAGACTGATGAAGAGTTGCATGCACCCCAGCTCAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS CCA 90 bp | TCAACAATCCTCAGCACAGGGATCACTGGTCCCAGCCAAAAGAGATaGACATCTTGGAAAGTCTGGCCCATTTCGGTAACCAGCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: STILSTGITGPSQKR*TSWKVWPISVTSCM Trigger: CATGCAGCTGGTTACCGAAATGGGCCAGACTTTCCAAGATGTCCATCTCTTTTGGCTGGGACCAGTGATCCCTGTGCTGAGGATTGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS-3UTR CAA 90 bp | GGGAGGTTACATGCCAGTAAACCTTGTAACTCTCCTGCTCAAACATCTATGGTGTGCATGCCTTCCTCATaGCTCTGGATCATGCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GRLHASKPCNSPAQTSMVCMPSS*LWIMPK Trigger: CTTGGGCATGATCCAGAGCAATGAGGAAGGCATGCA...CACCATAGATGTTTGAGCAGGAGAGTTACAAGGTTTACTGGCATGTAACCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS TCA 72 bp | AATCCAGGAAGCCACTCCAAGCAGCAGAAGATGCCATaGCGAGGTCACCACAGAGCCCAGGTCCAGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NPGSHSKQQKMP*RGHHRAQVQPR Trigger: TCTGGGCTGGACCTGGGCTCTGTGGTGACCTCGTCATGGCATCTTCTGCTGCTTGGAGTGGCTTCCTGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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| CDS CCA 72 bp | CTCAGCACAGGGATCACTGGTCCCAGCCAAAAGAGATaGACATCTTGGAAAGTCTGGCCCATTTCGGTAACC | + |
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Preference number: 6 (lower is better) Translates to: LSTGITGPSQKR*TSWKVWPISVT Trigger: GGTTACCGAAATGGGCCAGACTTTCCAAGATGTCCATCTCTTTTGGCTGGGACCAGTGATCCCTGTGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS GCA 72 bp | ACATCTTGGAAAGTCTGGCCCATTTCGGTAACCAGCTaGATGCCTTCCTCATTGCTCTGGATCATGCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSWKVWPISVTS*MPSSLLWIMPK Trigger: CTTGGGCATGATCCAGAGCAATGAGGAAGGCATGCAGCTGGTTACCGAAATGGGCCAGACTTTCCAAGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS CAA 72 bp | AGGGATCACTGGTCCCAGCCAAAAGAGATGGACATCTaGGAAAGTCTGGCCCATTTCGGTAACCAGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RDHWSQPKEMDI*ESLAHFGNQLH Trigger: ATGCAGCTGGTTACCGAAATGGGCCAGACTTTCCAAGATGTCCATCTCTTTTGGCTGGGACCAGTGATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS CCA 72 bp | AAATGCAGGGTCAACAATCCTCAGCACAGGGATCACTaGTCCCAGCCAAAAGAGATGGACATCTTGGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KCRVNNPQHRDH*SQPKEMDILES Trigger: ACTTTCCAAGATGTCCATCTCTTTTGGCTGGGACCAGTGATCCCTGTGCTGAGGATTGTTGACCCTGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003416.15 ENSMUST00000169591.8 |
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| CDS CCA 72 bp | AGTTCTCATAGAATGAGTAAGTCCAGGCAAGGATTCTaGCCAAAATCCAGGAAGCCACTCCAAGCAGCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSHRMSKSRQGF*PKSRKPLQAAE Trigger: TTCTGCTGCTTGGAGTGGCTTCCTGGATTTTGGCCAGAATCCTTGCCTGGACTTACTCATTCTATGAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003416.15 ENSMUST00000165515.8 ENSMUST00000169252.8 ENSMUST00000169591.8 ENSMUST00000237245.2 |
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