Pregenerated sensors for CYP4F15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073424Ensembl transcript IDs: ENSMUST00000008801.7, ENSMUST00000168171.8
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTGCTGGTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTaGGAGCCTCTGGCACAGGTGACAACCGTAGAGGTAAGCGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NCWFPVVLQRPLLVF*EPLAQVTTVEVSGW Trigger: CCACCCGCTTACCTCTACGGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAACCAGCAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| 3UTR CAA 90 bp | AATTTAGTTTTCACAGAAACACTAAAGAATCCTAGAATTGGAGTTTaGAGATTAGAATGGAGGTCAAGGCGATGGAAGTTTACCTCAACT | + |
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Preference number: 2 (lower is better) Translates to: NLVFTETLKNPRIGV*RLEWRSRRWKFTST Trigger: AGTTGAGGTAAACTTCCATCGCCTTGACCTCCATTCTAATCTCAAAACTCCAATTCTAGGATTCTTTAGTGTTTCTGTGAAAACTAAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| 3UTR GCA 72 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTaGGAGCCTCTGGCACAGGTGACAACCGTAGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: FPVVLQRPLLVF*EPLAQVTTVEV Trigger: TACCTCTACGGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | CAGGTGACAACCGTAGAGGTAAGCGGGTGGGTGGGACCCGTCCAGGTGCAGGGACAAAAGCAGCCATGGTaGGGATGCCTCCAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QVTTVEVSGWVGPVQVQGQKQPW*GCLQPQ Trigger: CTGAGGCTGGAGGCATCCTCACCATGGCTGCTTTTG...TCCCTGCACCTGGACGGGTCCCACCCACCCGCTTACCTCTACGGTTGTCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | GAGCCTCTGGCACAGGTGACAACCGTAGAGGTAAGCGGGTGGGTGGGACCCGTCCAAACGTCTGTCCTATaGAGTTCCTGGGCCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: EPLAQVTTVEVSGWVGPVQTSVL*SSWAQR Trigger: CCGCTGGGCCCAGGAACTGCATAGGACAGACGTTTG...GACGGGTCCCACCCACCCGCTTACCTCTACGGTTGTCACCTGTGCCAGAGGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | GGTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACCAAACGTCTGTCCTATaGAGTTCCTGGGCCCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GSLSSSSAPYWYSASLWHQTSVL*SSWAQR Trigger: CCGCTGGGCCCAGGAACTGCATAGGACAGACGTTTG...GTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGCAAAAGCAGCCATGGTaGGGATGCCTCCAGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQQKQPW*GCLQPQ Trigger: CTGAGGCTGGAGGCATCCTCACCATGGCTGCTTTTG...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | GTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACACCACCTGAGGCCAGGTaGTGCCACTTGGCATGCATT | + |
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Preference number: 4 (lower is better) Translates to: VPCRPPAPPTGILRASGTPPEAR*CHLACI Trigger: AATGCATGCCAAGTGGCAGCACCTGGCCTCAGGTGG...TGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | CTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCGTACCACCTGAGGCCAGGTaGTGCCACTTGGCATGCATT | + |
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Preference number: 4 (lower is better) Translates to: LQRPLLVFCEPLAQVTTVPPEAR*CHLACI Trigger: AATGCATGCCAAGTGGCAGCACCTGGCCTCAGGTGG...TACGGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | CCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGTGGTCACTAAGGCACTaGGCTCCAAGATGGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: PVVLQRPLLVFCEPLAQVWSLRH*APRWQK Trigger: TTTCTGCCATCTTGGAGCTCAGTGCCTTAGTGACCA...CACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CCA 90 bp | GGTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGACAGGTCCAACTGTaGCATCCTGAAAAACCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GSLSSSSAPYWYSASLWHRQVQL*HPEKPH Trigger: ATGGGGTTTTTCAGGATGCCACAGTTGGACCTGTCT...GTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CCA 90 bp | GTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCCATCCTCATGCTTACTaGGGAGAGTACGTCGTCGAT | + |
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Preference number: 4 (lower is better) Translates to: VLQRPLLVFCEPLAQVTTHPHAY*GEYVVD Trigger: ATCGACGACGTACTCTCCCCAGTAAGCATGAGGATG...GGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGATCATGCCTAGGTaGCCCAAGAACCAATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQVIMPR*PKNQFH Trigger: ATGGAATTGGTTCTTGGGTCACCTAGGCATGATCAC...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | GTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGTGATCATGCCTAGGTaGCCCAAGAACCAATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: VPCRPPAPPTGILRASGTVIMPR*PKNQFH Trigger: ATGGAATTGGTTCTTGGGTCACCTAGGCATGATCAC...TGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCGTATGGTCACTAAGGCACTaGGCTCCAAGATGGCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: LQRPLLVFCEPLAQVTTVWSLRH*APRWQK Trigger: TTTCTGCCATCTTGGAGCTCAGTGCCTTAGTGACCA...TACGGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGAGGACATCATCCTCATaGTTACTGGGGAGAGTACGT | + |
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Preference number: 4 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQRTSSS*LLGRVR Trigger: ACGTACTCTCCCCAGTAAGCATGAGGATGATGTCCT...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | GTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCAGGACATCATCCTCATaGTTACTGGGGAGAGTACGT | + |
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Preference number: 4 (lower is better) Translates to: VLQRPLLVFCEPLAQVTTRTSSS*LLGRVR Trigger: ACGTACTCTCCCCAGTAAGCATGAGGATGATGTCCT...GGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CCA 90 bp | TGCTGGTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGAGACAGGTCCAACTGTaGCATCCTGAAAAACCCCAT | + |
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Preference number: 4 (lower is better) Translates to: CWFPVVLQRPLLVFCEPLRQVQL*HPEKPH Trigger: ATGGGGTTTTTCAGGATGCCACAGTTGGACCTGTCT...CAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAACCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CCA 90 bp | CCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTTCACTGGGATTCTCCTaGCAGTTGCTATCAAAACTG | + |
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Preference number: 4 (lower is better) Translates to: PCRPPAPPTGILRASGTGSLGFS*QLLSKL Trigger: CAGTTTTGATAGCAACTGCCAGGAGAATCCCAGTGA...ACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR GCA 90 bp | GTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCTTCCATCTTCATCCTTaGTCAGCAGCAGCACATCAA | + |
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Preference number: 4 (lower is better) Translates to: VLQRPLLVFCEPLAQVTTFHLHP*SAAAHQ Trigger: TTGATGTGCTGCTGCTGAGCAAGGATGAAGATGGAA...GGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CCA 90 bp | TGCTGGTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGAGAACCAATTCCATTTaGGGGGTTGAGGGAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: CWFPVVLQRPLLVFCEPLRTNSI*GVEGNH Trigger: GTGATTTCCCTCAACCCCCCAAATGGAATTGGTTCT...CAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAACCAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGAGGGTTTTAGGATGTTaGAATGGAAAGCAGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQRVLGC*NGKQVS Trigger: TGACACCTGCTTTCCATTTCAACATCCTAAAACCCT...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | CAGGTGACAACCGTAGAGGTAAGCGGGTGGGTGGGACCCGTCCAGGTGCAGGGATGTTGGTGCTGTCATTaGAAATCTTCACATAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: QVTTVEVSGWVGPVQVQGCWCCH*KSSHRV Trigger: AACCCTATGTGAAGATTTTCAATGACAGCACCAACA...TCCCTGCACCTGGACGGGTCCCACCCACCCGCTTACCTCTACGGTTGTCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCGTAAGAACCAATTCCATTTaGGGGGTTGAGGGAAATCAC | + |
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Preference number: 4 (lower is better) Translates to: LQRPLLVFCEPLAQVTTVRTNSI*GVEGNH Trigger: GTGATTTCCCTCAACCCCCCAAATGGAATTGGTTCT...TACGGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCGTATGTTGGTGCTGTCATTaGAAATCTTCACATAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LQRPLLVFCEPLAQVTTVCWCCH*KSSHRV Trigger: AACCCTATGTGAAGATTTTCAATGACAGCACCAACA...TACGGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | CCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTCGGTGGCTGCTCCACTaGTCACCATCACTCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PCRPPAPPTGILRASGTGRWLLH*SPSLSK Trigger: CTTGCTGAGTGATGGTGACAAGTGGAGCAGCCACCG...ACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | GTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACACGGTGGCTGCTCCACTaGTCACCATCACTCAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: VPCRPPAPPTGILRASGTRWLLH*SPSLSK Trigger: CTTGCTGAGTGATGGTGACAAGTGGAGCAGCCACCG...TGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGACTTAGCCTTGGCCTaGAGGACATCATCCTCATGC | + |
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Preference number: 5 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQDLALA*RTSSSC Trigger: GCATGAGGATGATGTCCTCAAGGCCAAGGCTAAGTC...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | CAGGTGACAACCGTAGAGGTAAGCGGGTGGGTGGGACCCGTCCAGGTGCAGGGAGTTTTGGACTTAGCCTaGGCCTTGAGGACATCATCC | + |
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Preference number: 5 (lower is better) Translates to: QVTTVEVSGWVGPVQVQGVLDLA*ALRTSS Trigger: GGATGATGTCCTCAAGGCCAAGGCTAAGTCCAAAAC...TCCCTGCACCTGGACGGGTCCCACCCACCCGCTTACCTCTACGGTTGTCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGTGGGAGCACAATGTCTaGGGTACAACGACGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: PVVLQRPLLVFCEPLAQVWEHNV*GTTTGN Trigger: ATTTCCCGTCGTTGTACCCAAGACATTGTGCTCCCA...CACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTTTTGGACTTAGCCTaGGCCTTGAGGACATCATCC | + |
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Preference number: 5 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQVLDLA*ALRTSS Trigger: GGATGATGTCCTCAAGGCCAAGGCTAAGTCCAAAAC...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | TTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGTGGGAGCACAATGTCTaGGGTACAACGACGGGAAAT | + |
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Preference number: 5 (lower is better) Translates to: FPVVLQRPLLVFCEPLAQWEHNV*GTTTGN Trigger: ATTTCCCGTCGTTGTACCCAAGACATTGTGCTCCCA...CTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | GTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAATGAAATCCAGAGTTTaGGACTTAGCCTTGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VPCRPPAPPTGILRASGTMKSRV*DLALAL Trigger: CAAGGCCAAGGCTAAGTCCAAAACTCTGGATTTCAT...TGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | GTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGACAACCATGAAATCCAGAGTTTaGGACTTAGCCTTGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VLQRPLLVFCEPLAQVTTMKSRV*DLALAL Trigger: CAAGGCCAAGGCTAAGTCCAAAACTCTGGATTTCAT...GGTTGTCACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTGTGGGTCGCGAAAATATaGATGATGCAGATAACACCT | + |
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Preference number: 5 (lower is better) Translates to: PVVLQRPLLVFCEPLAQVWVAKI*MMQITP Trigger: AGGTGTTATCTGCATCATCAATATTTTCGCGACCCA...CACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | CCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACAGGTTGGGTCGCGAAAATATaGATGATGCAGATAACACCT | + |
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Preference number: 5 (lower is better) Translates to: PCRPPAPPTGILRASGTGWVAKI*MMQITP Trigger: AGGTGTTATCTGCATCATCAATATTTTCGCGACCCA...ACCTGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | GAGCCTCTGGCACAGGTGACAACCGTAGAGGTAAGCGGGTGGGTGGGACCCGTCTTGGCATGCATTATGTaGGTGCTGTCATTGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: EPLAQVTTVEVSGWVGPVLACIM*VLSLKI Trigger: GATTTTCAATGACAGCACCAACATAATGCATGCCAA...GACGGGTCCCACCCACCCGCTTACCTCTACGGTTGTCACCTGTGCCAGAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS-3UTR CAA 90 bp | GTTCCCTGTCGTCCTCCAGCGCCCCCTACTGGTATTCTGCGAGCCTCTGGCACATTGGCATGCATTATGTaGGTGCTGTCATTGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: VPCRPPAPPTGILRASGTLACIM*VLSLKI Trigger: GATTTTCAATGACAGCACCAACATAATGCATGCCAA...TGTGCCAGAGGCTCGCAGAATACCAGTAGGGGGCGCTGGAGGACGACAGGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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| CDS GCA 72 bp | TTGGACTTAGCCTTGGCCTTGAGGACATCATCCTCATaGTTACTGGGGAGAGTACGTCGTCGATCCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: LDLALALRTSSS*LLGRVRRRSWM Trigger: CATCCAGGATCGACGACGTACTCTCCCCAGTAAGCATGAGGATGATGTCCTCAAGGCCAAGGCTAAGTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008801.7 ENSMUST00000168171.8 |
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