Pregenerated sensors for CYP4F13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024055Ensembl transcript IDs: ENSMUST00000075253.13, ENSMUST00000137222.8, ENSMUST00000139353.8, ENSMUST00000141325.2, ENSMUST00000145683.2, ENSMUST00000234083.2, ENSMUST00000234683.2, ENSMUST00000234946.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAACAGCAGCTGAGGCTTGGAGCAGGGGAGCAATGAAGTTCGGGTaGACGAGTCGCAGGATTGGGTACACAGGTCCAACCCAAGAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: ATAAEAWSRGAMKFG*TSRRIGYTGPTQER Trigger: CCTCTCTTGGGTTGGACCTGTGTACCCAATCCTGCGACTCGTCCACCCGAACTTCATTGCTCCCCTGCTCCAAGCCTCAGCTGCTGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| 3UTR GCA 90 bp | GGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTAAGTTCCAGGATTaGAGCAATGTATTTGCTGTCAGACTCTTGGCAGTTGCTGTCGAC | + |
|
Preference number: 1 (lower is better) Translates to: GLAVPFHYKGAKFQD*SNVFAVRLLAVAVD Trigger: GTCGACAGCAACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACGGCACCGCCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGAGGTCACTGTGCGCCGGCGCCGAAAGTCTGTCCTATaGAGTTCCTGGTCCCCGCTG | + |
|
Preference number: 2 (lower is better) Translates to: GAWVSWFQGSCEVTVRRRRKSVL*SSWSPL Trigger: CAGCGGGGACCAGGAACTGCATAGGACAGACTTTCG...GCGCCGGCGCACAGTGACCTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAGGTCCAGGTACAGGAAGGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTTGTCCAGACGGGAAGTaGCCTTGGAGGCCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: QEVQVQEGLAVPFHYKGACPDGK*PWRPGT Trigger: AGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACA...AGCTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCTGTACCTGGACCTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAGGTCCAGGTACAGGAAGGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTATGTCCAGACGGGAAGTaGCCTTGGAGGCCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: RRSRYRKGWRCRFTTRELCPDGK*PWRPGT Trigger: AGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACA...TAGCTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCTGTACCTGGACCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCTTGGAGGCCAGGCACTGCCACTTAGCATGCATGATGTTCACACTCTTGTTATGTCCAGACGGGAAGTaGCCTTGGAGGCCAGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: PLEARHCHLACMMFTLLLCPDGK*PWRPGT Trigger: AGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACA...TAACAAGAGTGTGAACATCATGCATGCTAAGTGGCAGTGCCTGGCCTCCAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234683.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAGGTCCAGGTACAGGAAGGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTGCTAAGTTCCAGGATTaGAGCAATGTATTTGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: QEVQVQEGLAVPFHYKGAAKFQD*SNVFAV Trigger: GACAGCAAATACATTGCTGCAATCCTGGAACTTAGC...AGCTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCTGTACCTGGACCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR CAA 90 bp | CGTTTCACTACAAGGGAGCTAAGTTCCAGGATTGCAGCAATGTATTaGCTGTCAGACTCTTGGCAGTTGCTGTCGACACTGAAGATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RFTTRELSSRIAAMY*LSDSWQLLSTLKMH Trigger: GTGCATCTTCAGTGTCGACAGCAACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGAGGTCACTGTGCGCCGGCGCAGACGGGAAGTGCCCTaGGAGGCCAGGCACTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GAWVSWFQGSCEVTVRRRRREVP*EARHCH Trigger: GTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCT...GCGCCGGCGCACAGTGACCTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCAGACGGGAAGTGCCCTTGGAGGCCAGGCACTGCCACTTAGCATGCATGATAGACGGGAAGTGCCCTaGGAGGCCAGGCACTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VQTGSALGGQALPLSMHDRREVP*EARHCH Trigger: GTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCT...ATCATGCATGCTAAGTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234683.2 |
||
| 3UTR CCA 72 bp | GGGAGCAATGAAGTTCGGGTGGACGAGTCGCAGGATTaGGTACACAGGTCCAACCCAAGAGAGGTGGACATC | + |
|
Preference number: 3 (lower is better) Translates to: GSNEVRVDESQD*VHRSNPREVDI Trigger: GATGTCCACCTCTCTTGGGTTGGACCTGTGTACCCAATCCTGCGACTCGTCCACCCGAACTTCATTGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGAAGGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTAAGTTCCAGGATTGCTTTGCTGTCAGACTCTaGGCAGTTGCTGTCGACACT | + |
|
Preference number: 3 (lower is better) Translates to: QEGLAVPFHYKGAKFQDCFAVRL*AVAVDT Trigger: AGTGTCGACAGCAACTGCCAAGAGTCTGACAGCAAA...GCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR CCA 72 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTaGTTCCAAGGCAGCTGTGAGGTCACTGTGCGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: IQRFKEVGAWVS*FQGSCEVTVRR Trigger: CCGGCGCACAGTGACCTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTACAAGGGAGCTAAGTTCCAGGATTGCAGCAATGTATTTGCTGTCAGACTCTAGACGGGAAGTGCCCTaGGAGGCCAGGCACTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TTRELSSRIAAMYLLSDSRREVP*EARHCH Trigger: GTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCT...AGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGTCAGCGCCAGCGCTACCTTTATCTCGCTCATGGCGAAAGTCTGTCCTATTCAGACTCTTGGCAGTaGCTGTCGACACTGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: QGQRQRYLYLAHGESLSYSDSWQ*LSTLKM Trigger: CATCTTCAGTGTCGACAGCAACTGCCAAGAGTCTGA...ATAGGACAGACTTTCGCCATGAGCGAGATAAAGGTAGCGCTGGCGCTGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| 3UTR GCA 72 bp | ATGTCCAGACGGGAAGTGCCCTTGGAGGCCAGGCACTaGCACTTAGCATGCATGATGTTCACACTCTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: MSRREVPLEARH*HLACMMFTLLL Trigger: TAACAAGAGTGTGAACATCATGCATGCTAAGTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234683.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGTGCCGTTTCACTACAAGGGAGCTAAGTTCCAGGATTGCAGCAATGTATTTGTCAGACTCTTGGCAGTaGCTGTCGACACTGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: RCRFTTRELSSRIAAMYLSDSWQ*LSTLKM Trigger: CATCTTCAGTGTCGACAGCAACTGCCAAGAGTCTGA...CAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACGGCACCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR GCA 72 bp | GTGCCGTTTCACTACAAGGGAGCTAAGTTCCAGGATTaGAGCAATGTATTTGCTGTCAGACTCTTGGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: VPFHYKGAKFQD*SNVFAVRLLAV Trigger: AACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCCTCATTCGATAGTCCCTTACCATGTTCATCCTCAGCCATCAAGAGAACAGTTTTGGTCTTAGCCTaGGCCTTTAGGAATTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: MSSFDSPLPCSSSAIKRTVLVLA*AFRNST Trigger: TGTTGAATTCCTAAAGGCCAAGGCTAAGACCAAAAC...TGTTCTCTTGATGGCTGAGGATGAACATGGTAAGGGACTATCGAATGAGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| CDS-3UTR TCA 90 bp | GGCTTGGAGCAGGGGAGCAATGAAGTTCGGGTGGACGAGTCGCAGGATTGGGTACTCGGTTTAGGGGGCTaGGGGAAGCAACGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLEQGSNEVRVDESQDWVLGLGG*GKQRRR Trigger: TCGCCTTCGTTGCTTCCCTCAGCCCCCTAAACCGAG...TACCCAATCCTGCGACTCGTCCACCCGAACTTCATTGCTCCCCTGCTCCAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCAGCGCCAGCGCTACCTTTATCTCGCTCATGGCGAAAGTCTGTCCTATCTCGGTTTAGGGGGCTaGGGGAAGCAACGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QGQRQRYLYLAHGESLSYLGLGG*GKQRRR Trigger: TCGCCTTCGTTGCTTCCCTCAGCCCCCTAAACCGAG...ATAGGACAGACTTTCGCCATGAGCGAGATAAAGGTAGCGCTGGCGCTGACCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| CDS-3UTR TCA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGCTCGGTTTAGGGGGCTaGGGGAAGCAACGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: HFLGCNSSSDRGETLCPQLGLGG*GKQRRR Trigger: TCGCCTTCGTTGCTTCCCTCAGCCCCCTAAACCGAG...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTTGGGTGCAACAGCAGCTGAGGCTTGGAGCAGGGGAGCAATGAAGTTCCTCACCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLGATAAEAWSRGAMKFLTKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGGTGAG...GAACTTCATTGCTCCCCTGCTCCAAGCCTCAGCTGCTGTTGCACCCAAGGAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGTCCAGGTACAGGAAGGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTCCAACCCAAGAGAGGTaGACATCATGGAAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QEVQVQEGLAVPFHYKGAPTQER*TSWKSW Trigger: CCATGACTTCCATGATGTCCACCTCTCTTGGGTTGG...AGCTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCTGTACCTGGACCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTGGAGGCCAGGCACTGCCACTTAGCATGCATGATGTTCACACTCTTGTTAAGCAGCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLEARHCHLACMMFTLLLSSKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGCTGCT...TAACAAGAGTGTGAACATCATGCATGCTAAGTGGCAGTGCCTGGCCTCCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234683.2 |
||
| CDS-3UTR GCA 90 bp | CAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGAGTGTCCAGACGGGAAGTaGCCTTGGAGGCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QRFKEVGAWVSWFQGSCECPDGK*PWRPGT Trigger: AGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACA...CTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR TCA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGTTCATCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLGCNSSSDRGETLCPQFIKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGATGAA...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR TCA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGTCAATAGAGGAATCCTaGGGCTTGGAGCAGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLGCNSSSDRGETLCPQSIEES*GLEQGS Trigger: GCTCCCCTGCTCCAAGCCTCAGGATTCCTCTATTGA...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGGGCTGGCGGTGCCGTTTCACTACAAGGGAGCTAAGTTCCAGGATTGCGAGAGGTGGACATCATaGAAGTCATGGCCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QEGLAVPFHYKGAKFQDCERWTS*KSWPRC Trigger: ACATCTGGGCCATGACTTCCATGATGTCCACCTCTC...GCAATCCTGGAACTTAGCTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGACGGGAAGTGCCCTTaGAGGCCAGGCACTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCDGKCP*RPGTAT Trigger: AGTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTC...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | CTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCGCGCAGGATCAGCTCTaGCTTCCGGCGCGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRFKEVGAWVSWFQGAQDQL*LPARLL Trigger: AAGGAGCCGCGCCGGAAGCCAGAGCTGATCCTGCGC...GCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTCTCGGTTTAGGGGGCTaGGGGAAGCAACGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCLGLGG*GKQRRR Trigger: TCGCCTTCGTTGCTTCCCTCAGCCCCCTAAACCGAG...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGAGCAGGGGAGCAATGAAGTTCGGGTGGACGAGTCGCAGGATTGGGTACTTGTTCTTCATCTACTaGCACACTCACCAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AWSRGAMKFGWTSRRIGYLFFIY*HTHQGQ Trigger: TTGGCCTTGGTGAGTGTGGCAGTAGATGAAGAACAA...GTACCCAATCCTGCGACTCGTCCACCCGAACTTCATTGCTCCCCTGCTCCAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGAGGAATCCTGAGGCTTaGAGCAGGGGAGCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HFLGCNSSSDRGETLCPQRNPEA*SRGAMK Trigger: CTTCATTGCTCCCCTGCTCCAAGCCTCAGGATTCCT...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCCTCGGTTTAGGGGGCTaGGGGAAGCAACGAAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRFKEVGAWVSWFQGLGLGG*GKQRRR Trigger: TCGCCTTCGTTGCTTCCCTCAGCCCCCTAAACCGAG...GCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR TCA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGGGCCCAGATGTGTTATaGACTGCATGCTTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLGCNSSSDRGETLCPQGPDVL*TACFPR Trigger: ACGAGGAAAGCATGCAGTTCATAACACATCTGGGCC...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCGCAGGATTGGGTACACAGGTCCAACCCAAGAGAGGTGGACATCATGGAAGGCCCAGATGTGTTATaGACTGCATGCTTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ESQDWVHRSNPREVDIMEGPDVL*TACFPR Trigger: ACGAGGAAAGCATGCAGTTCATAACACATCTGGGCC...TTCCATGATGTCCACCTCTCTTGGGTTGGACCTGTGTACCCAATCCTGCGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| CDS-3UTR TCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCAGGGTCTGGCCAGACTaGAGGGTTGTGGTGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSRVWPD*RVVVNP Trigger: GGGGTTCACCACAACCCTTCAGTCTGGCCAGACCCT...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR TCA 90 bp | CTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGGGTCTGGCCAGACTaGAGGGTTGTGGTGAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRFKEVGAWVSWFQGRVWPD*RVVVNP Trigger: GGGGTTCACCACAACCCTTCAGTCTGGCCAGACCCT...GCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTCCAGACGGGAAGTaGCCTTGGAGGCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSCPDGK*PWRPGT Trigger: AGTGCCTGGCCTCCAAGGGCACTTCCCGTCTGGACA...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTAGGAAGGGCTGGCGGTaGCGTTTCACTACAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCRKGWR*RFTTRE Trigger: CTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCT...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGGAGAGGTGGACATCATaGAAGTCATGGCCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: HFLGCNSSSDRGETLCPQERWTS*KSWPRC Trigger: ACATCTGGGCCATGACTTCCATGATGTCCACCTCTC...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCGACGGGAAGTGCCCTTaGAGGCCAGGCACTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AVLFIQRFKEVGAWVSWFDGKCP*RPGTAT Trigger: AGTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTC...GAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGCGCAGGATCAGCTCTaGCTTCCGGCGCGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLFIQRFKEVGAWVSWFQAQDQL*LPARLL Trigger: AAGGAGCCGCGCCGGAAGCCAGAGCTGATCCTGCGC...TTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCCAGGATTGCAGCAATGTATTTGCTGTCAGACTCTTGGCAGTTGCTGTCGTTCATCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSRIAAMYLLSDSWQLLSFIKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGATGAA...CGACAGCAACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| CDS-3UTR TCA 90 bp | ACTACAAGGGAGCTAAGTTCCAGGATTGCAGCAATGTATTTGCTGTCAGACTCTAGCAGCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTRELSSRIAAMYLLSDSSSKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGCTGCT...AGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234946.2 |
||
| CDS-3UTR GCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCAGGAAGGGCTGGCGGTaGCGTTTCACTACAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSRKGWR*RFTTRE Trigger: CTCCCTTGTAGTGAAACGGCACCGCCAGCCCTTCCT...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTCATCTGGCAGGATaGGGAAGCGCAGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSCHLAG*GSAAGS Trigger: TGACCCTGCTGCGCTTCCGCATCCTGCCAGATGACA...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGAGGAGAGGTGGACATCATaGAAGTCATGGCCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QRFKEVGAWVSWFQGSCEERWTS*KSWPRC Trigger: ACATCTGGGCCATGACTTCCATGATGTCCACCTCTC...CTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGAGCCAACCCAAGAGAGGTaGACATCATGGAAGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QRFKEVGAWVSWFQGSCEPTQER*TSWKSW Trigger: CCATGACTTCCATGATGTCCACCTCTCTTGGGTTGG...CTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTTCATCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSFIKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGATGAA...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCCGAAAGTCTGTCCTATaGAGTTCCTGGTCCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSRKSVL*SSWSPL Trigger: CAGCGGGGACCAGGAACTGCATAGGACAGACTTTCG...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCCGAAAGTCTGTCCTATaGAGTTCCTGGTCCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRFKEVGAWVSWFQGRKSVL*SSWSPL Trigger: CAGCGGGGACCAGGAACTGCATAGGACAGACTTTCG...GCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTCTGGTGGTGGTGTCATaGCCTCCAAACATGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCLVVVS*PPNMKV Trigger: CACCTTCATGTTTGGAGGCCATGACACCACCACCAG...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGGCCCAGATGTGTTATaGACTGCATGCTTTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCGPDVL*TACFPR Trigger: ACGAGGAAAGCATGCAGTTCATAACACATCTGGGCC...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 |
||
| CDS-3UTR TCA 90 bp | GTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAATTAGCCAAGGCCAAGTaGCCCCAGAACCAGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLFIQRFKEVGAWVSWFQLAKAK*PQNQLG Trigger: ACCGAGCTGGTTCTGGGGTCACTTGGCCTTGGCTAA...TTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139353.8 |
||
| 3UTR CAA 72 bp | ACAAGGGAGCTAAGTTCCAGGATTGCAGCAATGTATTaGCTGTCAGACTCTTGGCAGTTGCTGTCGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: TRELSSRIAAMY*LSDSWQLLSTL Trigger: CAGTGTCGACAGCAACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137222.8 ENSMUST00000234946.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCACTGAAGGGTTGTGGTaGACCCCGAAAATGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFIQRFKEVGAWVSWFQGTEGLW*TPKMLM Trigger: CATCAGCATTTTCGGGGTTCACCACAACCCTTCAGT...GCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | GTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAACAGCAGCTGAGGCTTaGAGCAGGGGAGCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLFIQRFKEVGAWVSWFQTAAEA*SRGAMK Trigger: CTTCATTGCTCCCCTGCTCCAAGCCTCAGCTGCTGT...TTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075253.13 |
||
| CDS-3UTR CCA 90 bp | GCAGTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCTGGTGGTGGTGTCATaGCCTCCAAACATGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVLFIQRFKEVGAWVSWFLVVVS*PPNMKV Trigger: CACCTTCATGTTTGGAGGCCATGACACCACCACCAG...GAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGAGTTTCTGTGGGTTTTCTaGGTCAAATCTAAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QRFKEVGAWVSWFQGSCEFLWVF*VKSKGV Trigger: AACCCCTTTAGATTTGACCCAGAAAACCCACAGAAA...CTCACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTTGCAGCAATGTATTTaGTGTCAGACTCTTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSLQQCI*CQTLGS Trigger: ACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAA...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTTTTCTGTGGGTTTTCTaGGTCAAATCTAAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCFLWVF*VKSKGV Trigger: AACCCCTTTAGATTTGACCCAGAAAACCCACAGAAA...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAATTGCAGCAATGTATTTaGTGTCAGACTCTTGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLFIQRFKEVGAWVSWFQLQQCI*CQTLGS Trigger: ACTGCCAAGAGTCTGACAGCAAATACATTGCTGCAA...TTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGCTAAGTTCCAGGATTaGAGCAATGTATTTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLFIQRFKEVGAWVSWFQAKFQD*SNVFAV Trigger: GACAGCAAATACATTGCTGCAATCCTGGAACTTAGC...TTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTAGACGGGAAGTGCCCTaGGAGGCCAGGCACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCRREVP*EARHCH Trigger: GTGGCAGTGCCTGGCCTCCAAGGGCACTTCCCGTCT...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGCTGAGGCTTGGAGCAGGGGAGCAATGAAGTTCGGGTGGACGAGTCGCTGCATGCTTTCCTCGTaGTTCTTCATCTACTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TAAEAWSRGAMKFGWTSRCMLSS*FFIYCH Trigger: GTGGCAGTAGATGAAGAACAACGAGGAAAGCATGCA...GCGACTCGTCCACCCGAACTTCATTGCTCCCCTGCTCCAAGCCTCAGCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145683.2 |
||
| CDS-3UTR CAA 90 bp | CATTTCCTTGGGTGCAACAGCAGCTCAGATAGGGGTGAGACATTGTGCCCACAGTGCATGCTTTCCTCGTaGTTCTTCATCAAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HFLGCNSSSDRGETLCPQCMLSS*FFIKAK Trigger: CTTGGCCTTGATGAAGAACAACGAGGAAAGCATGCA...CTGTGGGCACAATGTCTCACCCCTATCTGAGCTGCTGTTGCACCCAAGGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141325.2 |
||
| CDS-3UTR CAA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTTGCATGCTTTCCTCGTaGTTCTTCATCAAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCCMLSS*FFIKAK Trigger: CTTGGCCTTGATGAAGAACAACGAGGAAAGCATGCA...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCTTTGCTGTCAGACTCTaGGCAGTTGCTGTCGACACT | + |
|
Preference number: 5 (lower is better) Translates to: LFIQRFKEVGAWVSWFQGFAVRL*AVAVDT Trigger: AGTGTCGACAGCAACTGCCAAGAGTCTGACAGCAAA...GCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CAA 90 bp | TTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTTTGCTGTCAGACTCTaGGCAGTTGCTGTCGACACT | + |
|
Preference number: 5 (lower is better) Translates to: FIQRFKEVGAWVSWFQGSFAVRL*AVAVDT Trigger: AGTGTCGACAGCAACTGCCAAGAGTCTGACAGCAAA...GCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCTCAGACTCTTGGCAGTaGCTGTCGACACTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: AVLFIQRFKEVGAWVSWFSDSWQ*LSTLKM Trigger: CATCTTCAGTGTCGACAGCAACTGCCAAGAGTCTGA...GAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CAA 90 bp | ACTACAAGGGAGCTAAGTTCCAGGATTGCAGCAATGTATTTGCTGTCAGACTCTTGCATGCTTTCCTCGTaGTTCTTCATCAAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTRELSSRIAAMYLLSDSCMLSS*FFIKAK Trigger: CTTGGCCTTGATGAAGAACAACGAGGAAAGCATGCA...AGAGTCTGACAGCAAATACATTGCTGCAATCCTGGAACTTAGCTCCCTTGTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137222.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGGCAGCTGTGTTTTGGTCTTAGCCTaGGCCTTTAGGAATTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: IQRFKEVGAWVSWFQGSCVLVLA*AFRNST Trigger: TGTTGAATTCCTAAAGGCCAAGGCTAAGACCAAAAC...ACAGCTGCCTTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS-3UTR CAA 90 bp | GTTCTGTTTATTCAGAGATTTAAAGAGGTAGGAGCATGGGTGAGCTGGTTCCAAGTTTTGGTCTTAGCCTaGGCCTTTAGGAATTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: VLFIQRFKEVGAWVSWFQVLVLA*AFRNST Trigger: TGTTGAATTCCTAAAGGCCAAGGCTAAGACCAAAAC...TTGGAACCAGCTCACCCATGCTCCTACCTCTTTAAATCTCTGAATAAACAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075253.13 ENSMUST00000139353.8 |
||
| CDS CCA 72 bp | GGGTACACAGGTCCAACCCAAGAGAGGTGGACATCATaGAAGTCATGGCCCAGATGTGTTATGAACTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GYTGPTQERWTS*KSWPRCVMNCM Trigger: CATGCAGTTCATAACACATCTGGGCCATGACTTCCATGATGTCCACCTCTCTTGGGTTGGACCTGTGTACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 ENSMUST00000141325.2 ENSMUST00000234083.2 |
||
| CDS GCA 72 bp | ACATCATGGAAGTCATGGCCCAGATGTGTTATGAACTaGATGCTTTCCTCGTTGTTCTTCATCAAGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TSWKSWPRCVMN*MLSSLFFIKAK Trigger: CTTGGCCTTGATGAAGAACAACGAGGAAAGCATGCAGTTCATAACACATCTGGGCCATGACTTCCATGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075253.13 ENSMUST00000137222.8 ENSMUST00000141325.2 |
||