Pregenerated sensors for CYP4B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028713Ensembl transcript IDs: ENSMUST00000102707.10, ENSMUST00000135569.8, ENSMUST00000145841.4
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTGCAGGTAGAGAGCGGCCATCCACAAAGGTTACTGGCTTGCTaGGCTGGCGGTACACTTGGGGTACAGGTGGGTAGAGGCGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: CLQVESGHPQRLLAC*AGGTLGVQVGRGGS Trigger: GCTTCCGCCTCTACCCACCTGTACCCCAAGTGTACCGCCAGCTCAGCAAGCCAGTAACCTTTGTGGATGGCCGCTCTCTACCTGCAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR GCA 90 bp | ATGCAATTCCTGGGCCCTGCAGAAAAAGGCATGAAGGCAAAGGGATaGCGTCCTGTCATATTCTCAGGAGAAAAGCGCAGTGGGTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: MQFLGPAEKGMKAKG*RPVIFSGEKRSGSK Trigger: CTTTGACCCACTGCGCTTTTCTCCTGAGAATATGACAGGACGGCATCCCTTTGCCTTCATGCCTTTTTCTGCAGGGCCCAGGAATTGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR-3UTR GCA 90 bp | GGTAGAGAGCGGCCATCCACAAAGGTTACTGGCTTGCTGAGCTGGCGGTACACTTTTCTCAGTTGTCTCTaGTCTATCCAGAAACCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GRERPSTKVTGLLSWRYTFLSCL*SIQKPS Trigger: ACTGGGTTTCTGGATAGAGCAGAGACAACTGAGAAA...AGTGTACCGCCAGCTCAGCAAGCCAGTAACCTTTGTGGATGGCCGCTCTCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTGGCAGGGATCCACAATaGCTCCATATCCTTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FESPGIESFHTHVYKRMSGRDPQ*LHILAL Trigger: GAGAGCAAGGATATGGAGTCATTGTGGATCCCTGCC...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGATCCACAAAGGTTACTaGCTTGCTGAGCTGGCGGTA | + |
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Preference number: 2 (lower is better) Translates to: EFESPGIESFHTHVYKRMIHKGY*LAELAV Trigger: TACCGCCAGCTCAGCAAGCCAGTAACCTTTGTGGAT...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTACTCTCAATGTGCATaGTTTTATCTCACAAACCCC | + |
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Preference number: 2 (lower is better) Translates to: EFESPGIESFHTHVYKRMYSQCA*FYLTNP Trigger: GGGGTTTGTGAGATAAAAGCATGCACATTGAGAGTA...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGATGACTCCATATCCTTaGTCTCCTAAGACCTACTTT | + |
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Preference number: 2 (lower is better) Translates to: EFESPGIESFHTHVYKRMMTPYP*SPKTYF Trigger: AAAGTAGGTCTTAGGAGAGCAAGGATATGGAGTCAT...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTAGGATACTCTCAATGTaGATGCTTTTATCTCACAAA | + |
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Preference number: 2 (lower is better) Translates to: FESPGIESFHTHVYKRMSRILSM*MLLSHK Trigger: TTTGTGAGATAAAAGCATGCACATTGAGAGTATCCT...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| 3UTR-3UTR CAA 90 bp | TCCGATGGAGGGCATAGATGTGCAGAGAGATCAGGCTGCCTGCAGGTAGAGAGCGAGCTGGCGGTACACTaGGGGTACAGGTGGGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SDGGHRCAERSGCLQVESELAVH*GYRWVE Trigger: CTCTACCCACCTGTACCCCAAGTGTACCGCCAGCTC...GCTCTCTACCTGCAGGCAGCCTGATCTCTCTGCACATCTATGCCCTCCATCGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR TCA 72 bp | GTAGAGAGCGGCCATCCACAAAGGTTACTGGCTTGCTaGGCTGGCGGTACACTTGGGGTACAGGTGGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: VESGHPQRLLAC*AGGTLGVQVGR Trigger: TCTACCCACCTGTACCCCAAGTGTACCGCCAGCTCAGCAAGCCAGTAACCTTTGTGGATGGCCGCTCTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTCCTGTCATATTCTCAGGAGAAAAGCGCAGTGGGTCAAAGACCTCTGGGTCACAAAGGTTACTGGCTaGCTGAGCTGGCGGTACACT | + |
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Preference number: 3 (lower is better) Translates to: PSCHILRRKAQWVKDLWVTKVTG*LSWRYT Trigger: AGTGTACCGCCAGCTCAGCAAGCCAGTAACCTTTGT...GACCCAGAGGTCTTTGACCCACTGCGCTTTTCTCCTGAGAATATGACAGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR GCA 72 bp | GGTAGGTCATCTGGGCCAGATCATCCCTTCATCTCCTaGTTCCCCCTCTTTCTCAGTTGTCTCTGCTCTATC | + |
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Preference number: 3 (lower is better) Translates to: GRSSGPDHPFIS*FPLFLSCLCSI Trigger: GATAGAGCAGAGACAACTGAGAAAGAGGGGGAAGCAGGAGATGAAGGGATGATCTGGCCCAGATGACCTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR GCA 72 bp | CTGGGCCCTGCAGAAAAAGGCATGAAGGCAAAGGGATaGCGTCCTGTCATATTCTCAGGAGAAAAGCGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LGPAEKGMKAKG*RPVIFSGEKRS Trigger: ACTGCGCTTTTCTCCTGAGAATATGACAGGACGGCATCCCTTTGCCTTCATGCCTTTTTCTGCAGGGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTCCTGTCATATTCTCAGGAGAAAAGCGCAGTGGGTCAAAGACCTCTGGGTCCCCCCTCTTTCTCAGTaGTCTCTGCTCTATCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PSCHILRRKAQWVKDLWVPPLSQ*SLLYPE Trigger: TTCTGGATAGAGCAGAGACAACTGAGAAAGAGGGGG...GACCCAGAGGTCTTTGACCCACTGCGCTTTTCTCCTGAGAATATGACAGGACGG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| 3UTR CAA 72 bp | GCAGGTAGAGAGCGGCCATCCACAAAGGTTACTGGCTaGCTGAGCTGGCGGTACACTTGGGGTACAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGRERPSTKVTG*LSWRYTWGTGG Trigger: CCCACCTGTACCCCAAGTGTACCGCCAGCTCAGCAAGCCAGTAACCTTTGTGGATGGCCGCTCTCTACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| CDS-3UTR TCA 90 bp | TCCGATGGAGGGCATAGATGTGCAGAGAGATCAGGCTGCCTGCAGGTAGAGAGCCAAAGGTGCACTTCATaGGGGTGTCCAGTGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SDGGHRCAERSGCLQVESQRCTS*GCPVPC Trigger: ACATGGCACTGGACACCCTCATGAAGTGCACCTTTG...GCTCTCTACCTGCAGGCAGCCTGATCTCTCTGCACATCTATGCCCTCCATCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| CDS-3UTR GCA 90 bp | CAGCACTGTTCCGATGGAGGGCATAGATGTGCAGAGAGATCAGGCTGCCTGCAGTGTGAGGTCACTAACTaGCAGGTAGTAGCTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: QHCSDGGHRCAERSGCLQCEVTN*QVVAVV Trigger: GACAACAGCTACTACCTGGCAGTTAGTGACCTCACA...CTGCAGGCAGCCTGATCTCTCTGCACATCTATGCCCTCCATCGGAACAGTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| CDS-3UTR GCA 90 bp | GCTTCCCCCTCTTTCTCAGTTGTCTCTGCTCTATCCAGAAACCCAGTGTGGATTGTGAGCAGCTTGCGGTaGTGGAACCATTTTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ASPSFSVVSALSRNPVWIVSSLR*WNHFGP Trigger: AGGGCCAAAATGGTTCCAGCACCGCAAGCTGCTCAC...AATCCACACTGGGTTTCTGGATAGAGCAGAGACAACTGAGAAAGAGGGGGAAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | CCGTCCTGTCATATTCTCAGGAGAAAAGCGCAGTGGGTCAAAGACCTCTGGGTCGAAACGGCGGCCATGTaGTGTGAGCCAGTAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: PSCHILRRKAQWVKDLWVETAAM*CEPVNE Trigger: TTCATTTACTGGCTCACACCACATGGCCGCCGTTTC...GACCCAGAGGTCTTTGACCCACTGCGCTTTTCTCCTGAGAATATGACAGGACGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135569.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCAGCAGAGAGATCAGGCTaGCTGCAGGTAGAGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KAQALNHSTHMFTRECLPAERSG*LQVESG Trigger: GCCGCTCTCTACCTGCAGGCAGCCTGATCTCTCTGC...TGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGCATGAGGGTGTCCAGTaGCATGTGGCCCACGTCACA | + |
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Preference number: 4 (lower is better) Translates to: EFESPGIESFHTHVYKRMHEGVQ*HVAHVT Trigger: TGTGACGTGGGCCACATGGCACTGGACACCCTCATG...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCATGCTCCTTCTCATCCTaGAGAGCTGCCTTCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KAQALNHSTHMFTRECLPCSFSS*RAAFRC Trigger: GCAGCGGAAGGCAGCTCTGCAGGATGAGAAGGAGCA...TGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | GAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCTTGTCCAAGCCAGAGTaGGTGGGCATAGGGGAACTG | + |
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Preference number: 4 (lower is better) Translates to: ESPGIESFHTHVYKRMSSLSKPE*VGIGEL Trigger: CAGTTCCCCTATGCCCACCCACTCTGGCTTGGACAA...GGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTGGTCATGGGCTATCTaGCAGGCCCGCAAGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLWSWAI*QARKKR Trigger: CCGTTTCTTGCGGGCCTGCCAGATAGCCCATGACCA...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCATGGTCATGGGCTATCTaGCAGGCCCGCAAGAAACGG | + |
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Preference number: 4 (lower is better) Translates to: KAQALNHSTHMFTRECLPWSWAI*QARKKR Trigger: CCGTTTCTTGCGGGCCTGCCAGATAGCCCATGACCA...TGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTCACTTGGGGTACAGGTaGGTAGAGGCGGAAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLHLGYR*VEAEAL Trigger: GAGTGCTTCCGCCTCTACCCACCTGTACCCCAAGTG...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGAGACCCAGGGCCCAGTaGCTTCAGGTAGAGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: EFESPGIESFHTHVYKRMRPRAQ*LQVEVD Trigger: ATCCACCTCTACCTGAAGCCACTGGGCCCTGGGTCT...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR TCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTCGTGGCCTTCGAACATaGATGTGTCCACTTCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLRGLRT*MCPLQP Trigger: GGGCTGAAGTGGACACATTCATGTTCGAAGGCCACG...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTAGGTTACTGGCTTGCTaGGCTGGCGGTACACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: FESPGIESFHTHVYKRMSRLLAC*AGGTLG Trigger: CCCAAGTGTACCGCCAGCTCAGCAAGCCAGTAACCT...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | ATCATTCCACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGTGCTCCTTCTCATCCTaGAGAGCTGCCTTCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IIPHTCLQENVFQDTLNVCSFSS*RAAFRC Trigger: GCAGCGGAAGGCAGCTCTGCAGGATGAGAAGGAGCA...CACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTAGCTGTCCAAAGCCCTaGCCAGCTTCTGCCTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: HTCLQENVFQDTLNVHAFSCPKP*PASASE Trigger: TTCGGAGGCAGAAGCTGGCCAGGGCTTTGGACAGCT...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTCAAAAAGCCAGTGCTTaGGGGGCCCTGGGAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HTCLQENVFQDTLNVHAFQKASA*GALGSC Trigger: ACAGCTTCCCAGGGCCCCCCAAGCACTGGCTTTTTG...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCATGGGTCAAAGACCTCTaGGTCAGGCCACACAGCACT | + |
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Preference number: 4 (lower is better) Translates to: KAQALNHSTHMFTRECLPWVKDL*VRPHST Trigger: AGTGCTGTGTGGCCTGACCCAGAGGTCTTTGACCCA...TGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | GAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCAGGAGAAAAGCGCAGTaGGTCAAAGACCTCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: ESPGIESFHTHVYKRMSSRRKAQ*VKDLWV Trigger: GACCCAGAGGTCTTTGACCCACTGCGCTTTTCTCCT...GGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR TCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCGAAACAGCAGGCTaGGGAGCTTCAGGACGGTTA | + |
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Preference number: 4 (lower is better) Translates to: FESPGIESFHTHVYKRMSSETAG*GASGRL Trigger: TAACCGTCCTGAAGCTCCTCAGCCTGCTGTTTCGGA...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTGAAGTCATACACATATaGAGCCTTCGGGTCCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLEVIHI*SLRVPS Trigger: CGAGGGGACCCGAAGGCTGCATATGTGTATGACTTC...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | TTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTCACAACATGAGGGTGTCCAGTaGCATGTGGCCCACGTCACA | + |
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Preference number: 4 (lower is better) Translates to: LQENVFQDTLNVHAFISQHEGVQ*HVAHVT Trigger: TGTGACGTGGGCCACATGGCACTGGACACCCTCATG...TTGTGAGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR GCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTCAAACTGCTGCCCAATaGAATTCCTGGGCCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FESPGIESFHTHVYKRMSQTAAQ*NSWALQ Trigger: CTGCAGGGCCCAGGAATTGCATTGGGCAGCAGTTTG...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTAGCAGCTTGCGGTGCTaGAACCATTTTGGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HTCLQENVFQDTLNVHAFSSLRC*NHFGPS Trigger: GGAAGGGCCAAAATGGTTCCAGCACCGCAAGCTGCT...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | AAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCACCAGCATCACCCGTGTaGACTCAGCAAATATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KAQALNHSTHMFTRECLPPASPV*TQQIWP Trigger: TGGCCATATTTGCTGAGTCCACACGGGTGATGCTGG...TGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTACTGGCTTGCTGAGCTaGCGGTACACTTGGGGTACA | + |
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Preference number: 4 (lower is better) Translates to: FESPGIESFHTHVYKRMSTGLLS*RYTWGT Trigger: TGTACCCCAAGTGTACCGCCAGCTCAGCAAGCCAGT...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR TCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTGGATCTCAAGGGCATaGCCAAAAAGCCAGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLWISRA*PKSQCL Trigger: CAAGCACTGGCTTTTTGGTCATGCCCTTGAGATCCA...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | TTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTCACAGTGAGCAGCTTGCGGTaGTGGAACCATTTTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FTRECLPGYSQCACFYLTVSSLR*WNHFGP Trigger: AGGGCCAAAATGGTTCCAGCACCGCAAGCTGCTCAC...TGTGAGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | TTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTCACAAGCAGCTTGCGGTGCTaGAACCATTTTGGCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FTRECLPGYSQCACFYLTSSLRC*NHFGPS Trigger: GGAAGGGCCAAAATGGTTCCAGCACCGCAAGCTGCT...TGTGAGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | TTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTCCAGCATCACCCGTGTaGACTCAGCAAATATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FESPGIESFHTHVYKRMSPASPV*TQQIWP Trigger: TGGCCATATTTGCTGAGTCCACACGGGTGATGCTGG...AGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGGAAACGGCGGCCATGTaGTGTGAGCCAGTAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: EFESPGIESFHTHVYKRMETAAM*CEPVNE Trigger: TTCATTTACTGGCTCACACCACATGGCCGCCGTTTC...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTCTAGTGGTGGTGTCGTaGCCTTCGAACATGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLLVVVS*PSNMNV Trigger: CACATTCATGTTCGAAGGCCACGACACCACCACTAG...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR TCA 90 bp | TTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTCACACAAAGGTGCACTTCATaGGGGTGTCCAGTGCCATGT | + |
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Preference number: 4 (lower is better) Translates to: FTRECLPGYSQCACFYLTQRCTS*GCPVPC Trigger: ACATGGCACTGGACACCCTCATGAAGTGCACCTTTG...TGTGAGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR TCA 90 bp | GAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCCTTAATGGGGATCTTTaGGGGATCTGGAGAGAATTC | + |
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Preference number: 4 (lower is better) Translates to: ESPGIESFHTHVYKRMSSLNGDL*GIWREF Trigger: GAATTCTCTCCAGATCCCTCAAAGATCCCCATTAAG...GGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | CACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTAAGTCATTATGGTACTaGAAGGAGTCGATGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HTHVYKRMSSRILSMCMLKSLWY*KESMRC Trigger: GCAGCGCATCGACTCCTTCCAGTACCATAATGACTT...AAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | GAGTTTGAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGAAGTCATTATGGTACTaGAAGGAGTCGATGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: EFESPGIESFHTHVYKRMKSLWY*KESMRC Trigger: GCAGCGCATCGACTCCTTCCAGTACCATAATGACTT...CATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CCA 90 bp | TTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTCACAGGTGGATGCCATTTTTaGAGCGCAAGATCAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FTRECLPGYSQCACFYLTGGCHF*SARSAG Trigger: CCCAGCTGATCTTGCGCTCCAAAAATGGCATCCACC...TGTGAGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTTGTGAGGTCACTAACTaGCAGGTAGTAGCTGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: HTCLQENVFQDTLNVHAFCEVTN*QVVAVV Trigger: GACAACAGCTACTACCTGGCAGTTAGTGACCTCACA...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR GCA 90 bp | CATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTGGAAGCACTCCTTCATaGACATGGTCAGGTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: HVYKRMSSRILSMCMLLSGSTPS*TWSGRS Trigger: TGACCTACCTGACCATGTGCATGAAGGAGTGCTTCC...AGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR GCA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTTCAGGTAGAGGTGGATaGCATTTTTGGAGCGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: HTCLQENVFQDTLNVHAFSGRGG*HFWSAR Trigger: TCTTGCGCTCCAAAAATGGCATCCACCTCTACCTGA...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CCA 90 bp | TTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTATCTCACACTAGTGGTGGTGTCGTaGCCTTCGAACATGAATGTG | + |
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Preference number: 4 (lower is better) Translates to: FTRECLPGYSQCACFYLTLVVVS*PSNMNV Trigger: CACATTCATGTTCGAAGGCCACGACACCACCACTAG...TGTGAGATAAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| 3UTR CAA 72 bp | TTGTGGAGTGAAGGAATGAGTTTGAAAGCCCAGGCATaGAATCATTCCACACACATGTTTACAAGAGAATGT | + |
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Preference number: 4 (lower is better) Translates to: LWSEGMSLKAQA*NHSTHMFTREC Trigger: ACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTCAAACTCATTCCTTCACTCCACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS TCA 90 bp | CACTGTGGCTTAGGCCGCTGTCTCCTTTGCCAAAGGTGCACTTCATaGGGGTGTCCAGTGCCATGTGGCCCACGTCACAGAAGATGTCAA | + |
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Preference number: 5 (lower is better) Translates to: HCGLGRCLLCQRCTS*GCPVPCGPRHRRCQ Trigger: TTGACATCTTCTGTGACGTGGGCCACATGGCACTGGACACCCTCATGAAGTGCACCTTTGGCAAAGGAGACAGCGGCCTAAGCCACAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS TCA 90 bp | GCCTTCGAACATGAATGTGTCCACTTCAGCCCGGAGGTCTGCATCTaGCAACTTGATCCCACTTTCATCCCGGGCACCCAGGAGAATGTC | + |
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Preference number: 5 (lower is better) Translates to: AFEHECVHFSPEVCI*QLDPTFIPGTQENV Trigger: GACATTCTCCTGGGTGCCCGGGATGAAAGTGGGATCAAGTTGTCAGATGCAGACCTCCGGGCTGAAGTGGACACATTCATGTTCGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS GCA 90 bp | GCCGCTGTCTCCTTTGCCAAAGGTGCACTTCATGAGGGTGTCCAGTaGCATGTGGCCCACGTCACAGAAGATGTCAAAGCTCTTATTCTC | + |
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Preference number: 5 (lower is better) Translates to: AAVSFAKGALHEGVQ*HVAHVTEDVKALIL Trigger: GAGAATAAGAGCTTTGACATCTTCTGTGACGTGGGCCACATGGCACTGGACACCCTCATGAAGTGCACCTTTGGCAAAGGAGACAGCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS GCA 90 bp | TCTCCGCTCCTGAAGCTTTTTCTGCTCCTTCTCATCCTGCAGAGCTaGCTTCCGCTGCCTGATGACATGATCTGTATGGTCATGGGCTAT | + |
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Preference number: 5 (lower is better) Translates to: SPLLKLFLLLLILQS*LPLPDDMICMVMGY Trigger: ATAGCCCATGACCATACAGATCATGTCATCAGGCAGCGGAAGGCAGCTCTGCAGGATGAGAAGGAGCAGAAAAAGCTTCAGGAGCGGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CAA 90 bp | GAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCGAGCTGGCGGTACACTaGGGGTACAGGTGGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: ESPGIESFHTHVYKRMSSELAVH*GYRWVE Trigger: CTCTACCCACCTGTACCCCAAGTGTACCGCCAGCTC...GGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS CCA 90 bp | AGGCTCATAGATGTTCAGGAAAACAATAAATTGTCCAAGCCAGAGTaGGTGGGCATAGGGGAACTGTTCGGTCCAAGTTACCACCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: RLIDVQENNKLSKPE*VGIGELFGPSYHLV Trigger: GACAAGGTGGTAACTTGGACCGAACAGTTCCCCTATGCCCACCCACTCTGGCTTGGACAATTTATTGTTTTCCTGAACATCTATGAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CAA 90 bp | GAAAGCCCAGGCATTGAATCATTCCACACACATGTTTACAAGAGAATGTCTTCCAGGCCGCTGTCTCCTTaGCCAAAGGTGCACTTCATG | + |
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Preference number: 5 (lower is better) Translates to: ESPGIESFHTHVYKRMSSRPLSP*PKVHFM Trigger: CATGAAGTGCACCTTTGGCAAAGGAGACAGCGGCCT...GGAAGACATTCTCTTGTAAACATGTGTGTGGAATGATTCAATGCCTGGGCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CAA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTAGGCCGCTGTCTCCTTaGCCAAAGGTGCACTTCATG | + |
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Preference number: 5 (lower is better) Translates to: HTCLQENVFQDTLNVHAFRPLSP*PKVHFM Trigger: CATGAAGTGCACCTTTGGCAAAGGAGACAGCGGCCT...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS-3UTR CAA 90 bp | ATCATTCCACACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGACAAAGGTTACTGGCTaGCTGAGCTGGCGGTACACT | + |
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Preference number: 5 (lower is better) Translates to: IIPHTCLQENVFQDTLNVTKVTG*LSWRYT Trigger: AGTGTACCGCCAGCTCAGCAAGCCAGTAACCTTTGT...CACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTGTGGAATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS-3UTR CAA 90 bp | CACACATGTTTACAAGAGAATGTCTTCCAGGATACTCTCAATGTGCATGCTTTTCAGGAAAACAATAAATaGTCCAAGCCAGAGTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: HTCLQENVFQDTLNVHAFQENNK*SKPEWV Trigger: CACCCACTCTGGCTTGGACAATTTATTGTTTTCCTG...AAAAGCATGCACATTGAGAGTATCCTGGAAGACATTCTCTTGTAAACATGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS CCA 72 bp | TCAGGGAAAGGCCTACCTGTATGGTCATGGGCTATCTaGCAGGCCCGCAAGAAACGGCGGCCATGTGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SGKGLPVWSWAI*QARKKRRPCGV Trigger: CACACCACATGGCCGCCGTTTCTTGCGGGCCTGCCAGATAGCCCATGACCATACAGGTAGGCCTTTCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145841.4 |
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| CDS CCA 72 bp | AGGAAGGCTTCAGGGAAAGGCCTACCTGTATGGTCATaGGCTATCTGGCAGGCCCGCAAGAAACGGCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RKASGKGLPVWS*AIWQARKKRRP Trigger: TGGCCGCCGTTTCTTGCGGGCCTGCCAGATAGCCCATGACCATACAGGTAGGCCTTTCCCTGAAGCCTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145841.4 |
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| CDS TCA 72 bp | AAGCCCTGGCCAGCTTCTGCCTCCGAAACAGCAGGCTaGGGAGCTTCAGGACGGTTACCATCAGGATCACTA | + |
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Preference number: 6 (lower is better) Translates to: KPWPASASETAG*GASGRLPSGSL Trigger: TAGTGATCCTGATGGTAACCGTCCTGAAGCTCCTCAGCCTGCTGTTTCGGAGGCAGAAGCTGGCCAGGGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102707.10 |
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| CDS TCA 72 bp | TTAGGCCGCTGTCTCCTTTGCCAAAGGTGCACTTCATaGGGGTGTCCAGTGCCATGTGGCCCACGTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: LGRCLLCQRCTS*GCPVPCGPRHR Trigger: TCTGTGACGTGGGCCACATGGCACTGGACACCCTCATGAAGTGCACCTTTGGCAAAGGAGACAGCGGCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS TCA 72 bp | TGTCCACTTCAGCCCGGAGGTCTGCATCTGACAACTTaGTCCCACTTTCATCCCGGGCACCCAGGAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: CPLQPGGLHLTT*SHFHPGHPGEC Trigger: ACATTCTCCTGGGTGCCCGGGATGAAAGTGGGATCAAGTTGTCAGATGCAGACCTCCGGGCTGAAGTGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS TCA 72 bp | CATGAATGTGTCCACTTCAGCCCGGAGGTCTGCATCTaGCAACTTGATCCCACTTTCATCCCGGGCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: HECVHFSPEVCI*QLDPTFIPGTQ Trigger: CTGGGTGCCCGGGATGAAAGTGGGATCAAGTTGTCAGATGCAGACCTCCGGGCTGAAGTGGACACATTCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS CCA 72 bp | GGCTATCTGGCAGGCCCGCAAGAAACGGCGGCCATGTaGTGTGAGCCAGTAAATGAAGTCATTATGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: GYLAGPQETAAM*CEPVNEVIMVL Trigger: CAGTACCATAATGACTTCATTTACTGGCTCACACCACATGGCCGCCGTTTCTTGCGGGCCTGCCAGATAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS GCA 72 bp | TCCTTTGCCAAAGGTGCACTTCATGAGGGTGTCCAGTaGCATGTGGCCCACGTCACAGAAGATGTCAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SFAKGALHEGVQ*HVAHVTEDVKA Trigger: AGCTTTGACATCTTCTGTGACGTGGGCCACATGGCACTGGACACCCTCATGAAGTGCACCTTTGGCAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS GCA 72 bp | CTGAAGCTTTTTCTGCTCCTTCTCATCCTGCAGAGCTaGCTTCCGCTGCCTGATGACATGATCTGGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: LKLFLLLLILQS*LPLPDDMIWSG Trigger: TCCACTCCAGATCATGTCATCAGGCAGCGGAAGGCAGCTCTGCAGGATGAGAAGGAGCAGAAAAAGCTTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145841.4 |
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| CDS GCA 72 bp | ATGAAGTCATTATGGTACTGGAAGGAGTCGATGCGCTaGTGCATCAGCAGTGTGAGGTCACTAACTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MKSLWYWKESMR*CISSVRSLTAR Trigger: CCTGGCAGTTAGTGACCTCACACTGCTGATGCAGCAGCGCATCGACTCCTTCCAGTACCATAATGACTTCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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| CDS GCA 72 bp | CTGAAGCTTTTTCTGCTCCTTCTCATCCTGCAGAGCTaGCTTCCGCTGCCTGATGACATGATCTGTATGGTC | + |
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Preference number: 6 (lower is better) Translates to: LKLFLLLLILQS*LPLPDDMICMV Trigger: GACCATACAGATCATGTCATCAGGCAGCGGAAGGCAGCTCTGCAGGATGAGAAGGAGCAGAAAAAGCTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 |
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| CDS CAA 72 bp | TCAAAGCTCTTATTCTCACTAGCCTTTTTCTCCCACTaGTCCAGCATCACCCGTGTGGACTCAGCAAATATG | + |
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Preference number: 6 (lower is better) Translates to: SKLLFSLAFFSH*SSITRVDSANM Trigger: CATATTTGCTGAGTCCACACGGGTGATGCTGGACAAGTGGGAGAAAAAGGCTAGTGAGAATAAGAGCTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102707.10 ENSMUST00000135569.8 ENSMUST00000145841.4 |
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