Pregenerated sensors for CYP4A31 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028712Ensembl transcript IDs: ENSMUST00000030480.4, ENSMUST00000030486.15, ENSMUST00000126645.8, ENSMUST00000141033.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGGGAACAAATAGGTGTGAAGAAAGATGTACAGAGAGGAAGATaGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAGAGTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: GREQIGVKKDVQRGR*WQDKMSGSMFIESV Trigger: GACAGACTCTATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCACACCTATTTGTTCCCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGTGGTGGCATTGAAGCAGGGGAATATTCCAGTGCCAAGGAATGATGATTTAGCTTTCTGCCAGTaGAACTCATCTCAGACATGG | + |
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Preference number: 2 (lower is better) Translates to: RRVVALKQGNIPVPRNDDLAFCQ*NSSQTW Trigger: CCATGTCTGAGATGAGTTTCACTGGCAGAAAGCTAA...ATCATCATTCCTTGGCACTGGAATATTCCCCTGCTTCAATGCCACCACCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| 3UTR-3UTR TCA 90 bp | CTGGAGTACTCTTCTGAAGAAGGTTGGTCACACCAACAACTTAGCTTTCTGCCAAAGACAAATGGGGAATaGGGAGCAAGGTGTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LEYSSEEGWSHQQLSFLPKTNGE*GARCVC Trigger: ACACACACACCTTGCTCCTCATTCCCCATTTGTCTT...TGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGAGTACTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTGTACAGAGAGGAAGATaGTGGCAGGACAAGATGTCA | + |
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Preference number: 2 (lower is better) Translates to: RKMYREEDGGRTRCQAVCVQRGR*WQDKMS Trigger: TGACATCTTGTCCTGCCACCATCTTCCTCTCTGTAC...ACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTACTCTTCTGAAGAAGGTTGGTCACACCAACAACTTAGCTTTCTGCCAGGGTAGATCCCATTTTTaGACTTCAGCACAAATCGGG | + |
|
Preference number: 2 (lower is better) Translates to: WSTLLKKVGHTNNLAFCQGRSHF*TSAQIG Trigger: CCCGATTTGTGCTGAAGTCCAAAAATGGGATCTACC...CTGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGAGTACTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030480.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTACTCTTCTGAAGAAGGTTGGTCACACCAACAACTTAGCTTTCTGCCATCTTCTGAAGAAGGTTaGTCACACCAACAACTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: LEYSSEEGWSHQQLSFLPSSEEG*SHQQLS Trigger: GCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGA...TGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGAGTACTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| 3UTR TCA 72 bp | AGATTAGAAGAGACAGGACGAGGAGGGTGGTGGCATTaGAGCAGGGGAATATTCCAGTGCCAAGGAATGATG | + |
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Preference number: 3 (lower is better) Translates to: RLEETGRGGWWH*SRGIFQCQGMM Trigger: CATCATTCCTTGGCACTGGAATATTCCCCTGCTTCAATGCCACCACCCTCCTCGTCCTGTCTCTTCTAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| 3UTR TCA 72 bp | AAGGTTGGTCACACCAACAACTTAGCTTTCTGCCAGTaGAACTCATCTCAGACATGGAGCTCCACAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KVGHTNNLAFCQ*NSSQTWSSTTV Trigger: TACAGTTGTGGAGCTCCATGTCTGAGATGAGTTTCACTGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTTCGGGGAGAGTCTGGTaGAAACCTCTGGGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSSGRVW*KPLGLA Trigger: GGCCAAACCCAGAGGTTTGCACCAGACTCTCCCCGA...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030480.4 |
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| CDS-3UTR GCA 90 bp | GGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAGAGTCTGTCCTTGGCGGTGATGGGAACTaGTGGAGAGCCTTGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRWWQDKMSGSMFIESVLGGDGN*WRALSS Trigger: GCTACTCAAGGCTCTCCAGCAGTTCCCATCACCGCC...AAGGACAGACTCTATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTCTGCATCTCTGTTGGTaGTCAGGGTGTGTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSLHLCW*SGCVAR Trigger: TCTGGCCACACACCCTGAGCACCAACAGAGATGCAG...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGCAGGAGGCAGGGAACAAATAGGTGTGAAGAAAGATGTACAGAGAGGCTGCATCTCTGTTGGTaGTCAGGGTGTGTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RESRRQGTNRCEERCTERLHLCW*SGCVAR Trigger: TCTGGCCACACACCCTGAGCACCAACAGAGATGCAG...CCTCTCTGTACATCTTTCTTCACACCTATTTGTTCCCTGCCTCCTGCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAGGCGGTGATGGGAACTaGTGGAGAGCCTTGAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: DVQRGRWWQDKMSGSMFIGGDGN*WRALSS Trigger: GCTACTCAAGGCTCTCCAGCAGTTCCCATCACCGCC...TATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTTCGGGGAGAGTCTGGTaGAAACCTGGAAGGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSSGRVW*KPGRVK Trigger: TTTGACCCTTCCAGGTTTGCACCAGACTCTCCCCGA...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | GGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAGAGTCTGTCCTTAGACTCCACTGGCTGTaGTGTCATGGCCCTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRWWQDKMSGSMFIESVLRLHWL*CHGPRS Trigger: TGATCGAGGGCCATGACACCACAGCCAGTGGAGTCT...AAGGACAGACTCTATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | CTGGAGTACTCTTCTGAAGAAGGTTGGTCACACCAACAACTTAGCTTTCTGCCATCTGGTGCAAACCTCTaGGTTTGGCCACACCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LEYSSEEGWSHQQLSFLPSGANL*VWPHLR Trigger: CCGAAGGTGTGGCCAAACCCAGAGGTTTGCACCAGA...TGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGAGTACTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030480.4 |
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| CDS-3UTR TCA 90 bp | CAAATGGGGAATGAGGAGCAAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTGGTCACCTTTaGACTGCTCATGCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QMGNEEQGVCVCVCVCVCVLGHL*TAHAQR Trigger: TCTTTGGGCATGAGCAGTTCAAAGGTGACCAAGAAC...ACACACACACACACACACACACACACACACACCTTGCTCCTCATTCCCCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | AGGAGGGTGGTGGCATTGAAGCAGGGGAATATTCCAGTGCCAAGGAATGATGATCAAATTGTTTCCCAATaGAGTTCCTGGCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRVVALKQGNIPVPRNDDQIVSQ*SSWLLL Trigger: CAGGAGGAGCCAGGAACTGCATTGGGAAACAATTTG...ATCATCATTCCTTGGCACTGGAATATTCCCCTGCTTCAATGCCACCACCCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | GATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAAGACTCCACTGGCTGTaGTGTCATGGCCCTCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: DVQRGRWWQDKMSGSMFIRLHWL*CHGPRS Trigger: TGATCGAGGGCCATGACACCACAGCCAGTGGAGTCT...TATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR TCA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTGTTCTTGGTCACCTTTaGACTGCTCATGCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSVLGHL*TAHAQR Trigger: TCTTTGGGCATGAGCAGTTCAAAGGTGACCAAGAAC...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GAGAGAGCAGGAGGCAGGGAACAAATAGGTGTGAAGAAAGATGTACAGAGAGGATGGTCACCTTTGAACTaGTCATGCCCAAAGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERAGGREQIGVKKDVQRGWSPLN*SCPKNQ Trigger: CTGGTTCTTTGGGCATGAGCAGTTCAAAGGTGACCA...TCCTCTCTGTACATCTTTCTTCACACCTATTTGTTCCCTGCCTCCTGCTCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GAGAGAGCAGGAGGCAGGGAACAAATAGGTGTGAAGAAAGATGTACAGAGAGGACAAATTGTTTCCCAATaGAGTTCCTGGCTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: ERAGGREQIGVKKDVQRGQIVSQ*SSWLLL Trigger: CAGGAGGAGCCAGGAACTGCATTGGGAAACAATTTG...TCCTCTCTGTACATCTTTCTTCACACCTATTTGTTCCCTGCCTCCTGCTCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | TGGAGTACTCTTCTGAAGAAGGTTGGTCACACCAACAACTTAGCTTTCTGCCAGGTTGACAAGCTTGGTTaGACAAGCGGCCATTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSTLLKKVGHTNNLAFCQVDKLG*TSGHWK Trigger: CTTCCAATGGCCGCTTGTCCAACCAAGCTTGTCAAC...CTGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGAGTACTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGAGAGCAGGAGGCAGGGAACAAATAGGTGTGAAGAAAGATGTACATCTGAACTTCCTCTCTaGATCTCTGTTGGTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: RERESRRQGTNRCEERCTSELPL*ISVGAQ Trigger: CTGAGCACCAACAGAGATGCAGAGAGGAAGTTCAGA...TGTACATCTTTCTTCACACCTATTTGTTCCCTGCCTCCTGCTCTCTCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | GATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATATCTGAACTTCCTCTCTaGATCTCTGTTGGTGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DVQRGRWWQDKMSGSMFISELPL*ISVGAQ Trigger: CTGAGCACCAACAGAGATGCAGAGAGGAAGTTCAGA...TATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGGAGAGTGTGACCTaGACACCTTTAGGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSMESVT*TPLGKE Trigger: TTCTTTACCTAAAGGTGTCCAGGTCACACTCTCCAT...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | AGGAGGGTGGTGGCATTGAAGCAGGGGAATATTCCAGTGCCAAGGAATGATGATTTGGGAAGTTCTCTATaGATGACACAATTTCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RRVVALKQGNIPVPRNDDLGSSL*MTQFPV Trigger: TACAGGAAATTGTGTCATGCATAGAGAACTTCCCAA...ATCATCATTCCTTGGCACTGGAATATTCCCCTGCTTCAATGCCACCACCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGAGAGCAGGAGGCAGGGAACAAATAGGTGTGAAGAAAGATGTACAATGGAGAGTGTGACCTaGACACCTTTAGGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: RERESRRQGTNRCEERCTMESVT*TPLGKE Trigger: TTCTTTACCTAAAGGTGTCCAGGTCACACTCTCCAT...TGTACATCTTTCTTCACACCTATTTGTTCCCTGCCTCCTGCTCTCTCTCTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | GATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAGGTAGATCCCATTTTTaGACTTCAGCACAAATCGGG | + |
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Preference number: 4 (lower is better) Translates to: DVQRGRWWQDKMSGSMFIGRSHF*TSAQIG Trigger: CCCGATTTGTGCTGAAGTCCAAAAATGGGATCTACC...TATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | CTGGAGTACTCTTCTGAAGAAGGTTGGTCACACCAACAACTTAGCTTTCTGCCAATTTCCTGTAGTTCTTaGTCACCTTTGAACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LEYSSEEGWSHQQLSFLPISCSS*SPLNCS Trigger: TGAGCAGTTCAAAGGTGACCAAGAACTACAGGAAAT...TGGCAGAAAGCTAAGTTGTTGGTGTGACCAACCTTCTTCAGAAGAGTACTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | ATGGAGCTCCACAACTGTAAGATAACAACTTTCAATTATTTCAGACCACCAAGGGTTGACAAGCTTGGTTaGACAAGCGGCCATTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: MELHNCKITTFNYFRPPRVDKLG*TSGHWK Trigger: CTTCCAATGGCCGCTTGTCCAACCAAGCTTGTCAAC...CCTTGGTGGTCTGAAATAATTGAAAGTTGTTATCTTACAGTTGTGGAGCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | AGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTCCTCATTCTCCATTCTaGCAAATAAGAGGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: RKMYREEDGGRTRCQAVCPHSPF*QIRGYP Trigger: TGGATATCCTCTTATTTGCCAGAATGGAGAATGAGG...ACATACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR GCA 90 bp | ATGGAGCTCCACAACTGTAAGATAACAACTTTCAATTATTTCAGACCACCAAGGTGGTCACCTTTGAACTaGTCATGCCCAAAGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: MELHNCKITTFNYFRPPRWSPLN*SCPKNQ Trigger: CTGGTTCTTTGGGCATGAGCAGTTCAAAGGTGACCA...CCTTGGTGGTCTGAAATAATTGAAAGTTGTTATCTTACAGTTGTGGAGCTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CCA 90 bp | TGTGAAAATGATACTAGGCTGAATAATGGCTTCACAATGACATTCAGGCCTTGGATTTCCTGTAGTTCTTaGTCACCTTTGAACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: CENDTRLNNGFTMTFRPWISCSS*SPLNCS Trigger: TGAGCAGTTCAAAGGTGACCAAGAACTACAGGAAAT...CCAAGGCCTGAATGTCATTGTGAAGCCATTATTCAGCCTAGTATCATTTTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CAA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTCAAACACCTCTGGGTTaGGCCACACCTTCGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSQTPLG*ATPSGC Trigger: ACAACCCGAAGGTGTGGCCAAACCCAGAGGTGTTTG...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030486.15 |
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| CDS TCA 90 bp | TATTTTCCAGCTCTCCCTCATCCTGCAGCTGATCCTTTCTCATCTTaGTCACTCCATCTGTGTGATCATGGGCAAGTTGACAAGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: YFPALPHPAADPFSS*SLHLCDHGQVDKLG Trigger: ACCAAGCTTGTCAACTTGCCCATGATCACACAGATGGAGTGATCAAGATGAGAAAGGATCAGCTGCAGGATGAGGGAGAGCTGGAAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000126645.8 |
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| CDS CCA 90 bp | ACATATTCCTCACACGAGAGTGAACTAGGTTATTCAAGTCCCCAATaGCCTGGAGGTAGGTCTTGTAATTTCCATCTACCTGAACACTGC | + |
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Preference number: 5 (lower is better) Translates to: TYSSHESELGYSSPQ*PGGRSCNFHLPEHC Trigger: GCAGTGTTCAGGTAGATGGAAATTACAAGACCTACCTCCAGGCCATTGGGGACTTGAATAACCTAGTTCACTCTCGTGTGAGGAATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000126645.8 |
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| CDS-3UTR CAA 90 bp | GTGAAGAAAGATGTACAGAGAGGAAGATGGTGGCAGGACAAGATGTCAGGCAGTAAACGTCTCTTCTTCTaGATATTTTCCAGCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: VKKDVQRGRWWQDKMSGSKRLFF*IFSSSP Trigger: GGGAGAGCTGGAAAATATCAAGAAGAAGAGACGTTT...ACTGCCTGACATCTTGTCCTGCCACCATCTTCCTCTCTGTACATCTTTCTTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS-3UTR CAA 90 bp | ATGGAGCTCCACAACTGTAAGATAACAACTTTCAATTATTTCAGACCACCAAGGTGCAAACCTCTGGGTTaGGCCACACCTTCGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: MELHNCKITTFNYFRPPRCKPLG*ATPSGC Trigger: ACAACCCGAAGGTGTGGCCAAACCCAGAGGTTTGCA...CCTTGGTGGTCTGAAATAATTGAAAGTTGTTATCTTACAGTTGTGGAGCTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030480.4 |
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| CDS-3UTR CAA 90 bp | GGAAGATGGTGGCAGGACAAGATGTCAGGCAGTATGTTTATAGAGTCTGTCCTTAAACGTCTCTTCTTCTaGATATTTTCCAGCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: GRWWQDKMSGSMFIESVLKRLFF*IFSSSP Trigger: GGGAGAGCTGGAAAATATCAAGAAGAAGAGACGTTT...AAGGACAGACTCTATAAACATACTGCCTGACATCTTGTCCTGCCACCATCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 |
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| CDS GCA 72 bp | TCATGTAGTCAGGGTCATAGACAGTTAAGTAGGCCTTaGTCCCCCAGAACCATCGAGGAAAGGCACTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SCSQGHRQLSRP*SPRTIEERHLG Trigger: TCCCAAGTGCCTTTCCTCGATGGTTCTGGGGGAGCAAGGCCTACTTAACTGTCTATGACCCTGACTACATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000126645.8 ENSMUST00000141033.8 |
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| CDS TCA 72 bp | GCTCTCCCTCATCCTGCAGCTGATCCTTTCTCATCTTaGTCACTCCATCTGTGTGATCATGGGCAAGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: ALPHPAADPFSS*SLHLCDHGQVD Trigger: GTCAACTTGCCCATGATCACACAGATGGAGTGATCAAGATGAGAAAGGATCAGCTGCAGGATGAGGGAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000126645.8 |
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| CDS CAA 72 bp | CATCTTGATCACTCCATCTGTGTGATCATGGGCAAGTaGACAAGCTTGGTTGGACAAGCGGCCATTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HLDHSICVIMGK*TSLVGQAAIGR Trigger: TCTTCCAATGGCCGCTTGTCCAACCAAGCTTGTCAACTTGCCCATGATCACACAGATGGAGTGATCAAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000126645.8 |
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| CDS CCA 72 bp | TCACACGAGAGTGAACTAGGTTATTCAAGTCCCCAATaGCCTGGAGGTAGGTCTTGTAATTTCCATCTACCT | + |
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Preference number: 6 (lower is better) Translates to: SHESELGYSSPQ*PGGRSCNFHLP Trigger: AGGTAGATGGAAATTACAAGACCTACCTCCAGGCCATTGGGGACTTGAATAACCTAGTTCACTCTCGTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000126645.8 |
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| CDS CCA 72 bp | AAGTTCTCTATGCATGACACAATTTCCTGTAGTTCTTaGTCACCTTTGAACTGCTCATGCCCAAAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: KFSMHDTISCSS*SPLNCSCPKNQ Trigger: CTGGTTCTTTGGGCATGAGCAGTTCAAAGGTGACCAAGAACTACAGGAAATTGTGTCATGCATAGAGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030480.4 ENSMUST00000030486.15 ENSMUST00000141033.8 |
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