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Pregenerated sensors for CYP4A29 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000083138

Ensembl transcript IDs: ENSMUST00000118278.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TGCAGGTGGTCCCATGTGATGGGGGATCCATCCCCAAGAAGGCTCTaGACCTCTTCTCTGCATCTCTGCTGGTGGTCGGGATGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: CRWSHVMGDPSPRRL*TSSLHLCWWSGCVA
Trigger: GGCTACACATCCCGACCACCAGCAGAGATGCAGAGAAGAGGTCCAGAGCCTTCTTGGGGATGGATCCCCCATCACATGGGACCACCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS TCA 90 bp GCTTCTTCATTGATTTGTTGTCCTGTAGCTGAGCCTTCCTTAGCTTaGCAACTCGGTCTGTGTGTTCATGGGCAATCTGGCAGGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ASSLICCPVAEPSLA*QLGLCVHGQSGRQS
Trigger: ACTCTGCCTGCCAGATTGCCCATGAACACACAGACCGAGTTGTCAAGCTAAGGAAGGCTCAGCTACAGGACAACAAATCAATGAAGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS TCA 90 bp CATCTCTTTCCTCTGAGCTTCTTCATTGATTTGTTGTCCTGTAGCTaGGCCTTCCTTAGCTTGACAACTCGGTCTGTGTGTTCATGGGCA +
Preference number: 5 (lower is better)
Translates to: HLFPLSFFIDLLSCS*AFLSLTTRSVCSWA
Trigger: TGCCCATGAACACACAGACCGAGTTGTCAAGCTAAGGAAGGCTCAGCTACAGGACAACAAATCAATGAAGAAGCTCAGAGGAAAGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS TCA 90 bp ATTTCTCTAAATATCTTAGAATCCATCTCAGCTCCTCATCCACTTTaGACTGCAAGCAATGCCCAAAGAGCCAGTGGGAGGGTGGTGATG +
Preference number: 5 (lower is better)
Translates to: ISLNILESISAPHPL*TASNAQRASGRVVM
Trigger: CATCACCACCCTCCCACTGGCTCTTTGGGCATTGCTTGCAGTTCAAAGTGGATGAGGAGCTGAGATGGATTCTAAGATATTTAGAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS CCA 72 bp TCCCATGTGATGGGGGATCCATCCCCAAGAAGGCTCTaGACCTCTTCTCTGCATCTCTGCTGGTGGTCGGGA +
Preference number: 6 (lower is better)
Translates to: SHVMGDPSPRRL*TSSLHLCWWSG
Trigger: TCCCGACCACCAGCAGAGATGCAGAGAAGAGGTCCAGAGCCTTCTTGGGGATGGATCCCCCATCACATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS TCA 72 bp AGTGGGAGGGTGGTGATGGGAACTGGTAGAGGGCTCTaGGCAGCCATTGTCTGCGCAGATAGTGTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: SGRVVMGTGRGL*AAIVCADSVVL
Trigger: CAGCACAACACTATCTGCGCAGACAATGGCTGCTCAGAGCCCTCTACCAGTTCCCATCACCACCCTCCCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS GCA 72 bp CTTAGAATCCATCTCAGCTCCTCATCCACTTTGAACTaGAAGCAATGCCCAAAGAGCCAGTGGGAGGGTGGT +
Preference number: 6 (lower is better)
Translates to: LRIHLSSSSTLN*KQCPKSQWEGG
Trigger: ACCACCCTCCCACTGGCTCTTTGGGCATTGCTTGCAGTTCAAAGTGGATGAGGAGCTGAGATGGATTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS TCA 72 bp CCTCTGAGCTTCTTCATTGATTTGTTGTCCTGTAGCTaGGCCTTCCTTAGCTTGACAACTCGGTCTGTGTGT +
Preference number: 6 (lower is better)
Translates to: PLSFFIDLLSCS*AFLSLTTRSVC
Trigger: ACACACAGACCGAGTTGTCAAGCTAAGGAAGGCTCAGCTACAGGACAACAAATCAATGAAGAAGCTCAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS CAA 90 bp AATTTCTCTAAATATCTTAGAATCCATCTCAGCTCCTCATCCACTTaGAACTGCAAGCAATGCCCAAAGAGCCAGTGGGAGGGTGGTGAT +
Preference number: 6 (lower is better)
Translates to: NFSKYLRIHLSSSST*NCKQCPKSQWEGGD
Trigger: ATCACCACCCTCCCACTGGCTCTTTGGGCATTGCTTGCAGTTCAAAGTGGATGAGGAGCTGAGATGGATTCTAAGATATTTAGAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2
CDS CCA 72 bp ATGCTTTGTCAGACAAGCTGCTCCCATCATCCATTCTaGATAATAGAAGGATGTCCAGGAAATCCAAACATC +
Preference number: 6 (lower is better)
Translates to: MLCQTSCSHHPF*IIEGCPGNPNI
Trigger: GATGTTTGGATTTCCTGGACATCCTTCTATTATCCAGAATGGATGATGGGAGCAGCTTGTCTGACAAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118278.2