Pregenerated sensors for CYP4A14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028715Ensembl transcript IDs: ENSMUST00000030487.3
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGAACAGGCTGGGGGACAGGCTGCTGGCTGCAGGTTCAGTGGCTaGTCAGAGTTAAAGCGAGATGGGAAACAGGTACATGCACAGGTT | + |
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Preference number: 1 (lower is better) Translates to: GEQAGGQAAGCRFSG*SELKRDGKQVHAQV Trigger: AACCTGTGCATGTACCTGTTTCCCATCTCGCTTTAACTCTGACCAGCCACTGAACCTGCAGCCAGCAGCCTGTCCCCCAGCCTGTTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR CCA 90 bp | ACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACTGCTCTGGCTCCCCAAAGTGGGGGACAGGCTGCTaGCTGCAGGTTCAGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TRWQHASLDCQNCSGSPKWGTGC*LQVQWL Trigger: CAGCCACTGAACCTGCAGCCAGCAGCCTGTCCCCCA...CTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR GCA 90 bp | CCACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAAGACAAAAGCAGGTATTaGAGGCAGCAGACCTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PHSNSRDQMATCFPGLPKDKSRY*RQQTSG Trigger: TCCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTC...TTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR TCA 90 bp | TTCACAGTTTGGCCCAAAGTAGCAAAAACTATTCATTTCTCTCTACCTTTCTGTAATGGTTATGAGGGGTaGACAGGCTGGGGGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: FTVWPKVAKTIHFSLPFCNGYEG*TGWGTG Trigger: GCCTGTCCCCCAGCCTGTTCACCCCTCATAACCATT...ACAGAAAGGTAGAGAGAAATGAATAGTTTTTGCTACTTTGGGCCAAACTGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR TCA 90 bp | AGAAAGGTACAAGTGTCTCCCTCTAAAATATATCTTCCTCTGTCAGTGCAATGGGAAAAGCTACAGAAATaGGGGCAGAAAGATGAGATG | + |
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Preference number: 2 (lower is better) Translates to: RKVQVSPSKIYLPLSVQWEKLQK*GQKDEM Trigger: CATCTCATCTTTCTGCCCTCATTTCTGTAGCTTTTC...CCATTGCACTGACAGAGGAAGATATATTTTAGAGGGAGACACTTGTACCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCTCTGGCTGGTACCAGATTTTAGTGTTAATTTTCTCCCAGCATGTGATCAAGAGTCTAATAACTaGAGGGAGAGAAAGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: SFLWLVPDFSVNFLPACDQESNN*RERKVQ Trigger: TTGTACCTTTCTCTCCCTTCAGTTATTAGACTCTTG...ATCACATGCTGGGAGAAAATTAACACTAAAATCTGGTACCAGCCAGAGGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCCTCTGGCTGGTACCAGATTTTAGTGTTAATTTTCTCCCAGCATGTGATGAACGTTTTAATTCATaGTGTCCATTGTCCCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: SFLWLVPDFSVNFLPACDERFNS*CPLSQE Trigger: CTCTTGGGACAATGGACATCATGAATTAAAACGTTC...ATCACATGCTGGGAGAAAATTAACACTAAAATCTGGTACCAGCCAGAGGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR CCA 90 bp | AGAAAGGTACAAGTGTCTCCCTCTAAAATATATCTTCCTCTGTCAGTGCAATGGAGAGTTAAAGCGAGATaGGAAACAGGTACATGCACA | + |
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Preference number: 2 (lower is better) Translates to: RKVQVSPSKIYLPLSVQWRVKAR*ETGTCT Trigger: TGTGCATGTACCTGTTTCCCATCTCGCTTTAACTCT...CCATTGCACTGACAGAGGAAGATATATTTTAGAGGGAGACACTTGTACCTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGGTGAACAGGCTGGGGGACAGGCTGCTGGCTGCAGGTTCAGTGGCTGGTCAAGACAAAAGCAGGTATaGCAGGCAGCAGACCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: RGEQAGGQAAGCRFSGWSRQKQV*QAADLW Trigger: CCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTCT...TGACCAGCCACTGAACCTGCAGCCAGCAGCCTGTCCCCCAGCCTGTTCACCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR CCA 72 bp | ACAGGCTGGGGGACAGGCTGCTGGCTGCAGGTTCAGTaGCTGGTCAGAGTTAAAGCGAGATGGGAAACAGGT | + |
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Preference number: 3 (lower is better) Translates to: TGWGTGCWLQVQ*LVRVKARWETG Trigger: ACCTGTTTCCCATCTCGCTTTAACTCTGACCAGCCACTGAACCTGCAGCCAGCAGCCTGTCCCCCAGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR CCA 72 bp | GCTGGGGGACAGGCTGCTGGCTGCAGGTTCAGTGGCTaGTCAGAGTTAAAGCGAGATGGGAAACAGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: AGGQAAGCRFSG*SELKRDGKQVH Trigger: ATGTACCTGTTTCCCATCTCGCTTTAACTCTGACCAGCCACTGAACCTGCAGCCAGCAGCCTGTCCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR GCA 72 bp | ACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTaGCAAAACTGCTCTGGCTCCCCAAAGTTCATGCTG | + |
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Preference number: 3 (lower is better) Translates to: TVGTRWQHASLD*QNCSGSPKFML Trigger: CAGCATGAACTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR CCA 72 bp | CTGCAGGTTCAGTGGCTGGTCAGAGTTAAAGCGAGATaGGAAACAGGTACATGCACAGGTTGGGAAGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: LQVQWLVRVKAR*ETGTCTGWEGV Trigger: GACACCTTCCCAACCTGTGCATGTACCTGTTTCCCATCTCGCTTTAACTCTGACCAGCCACTGAACCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR GCA 72 bp | ACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACTaGTCTGGCTCCCCAAAGTTCATGCTGAGTAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: TRWQHASLDCQN*SGSPKFMLSSF Trigger: AAAACTACTCAGCATGAACTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR TCA 72 bp | AGGTTGGGAAGGTGTCTAGAGGAAAAGCTACAGAAATaGGGGCAGAAAGATGAGATGACAGGACACATTGCA | + |
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Preference number: 3 (lower is better) Translates to: RLGRCLEEKLQK*GQKDEMTGHIA Trigger: TGCAATGTGTCCTGTCATCTCATCTTTCTGCCCTCATTTCTGTAGCTTTTCCTCTAGACACCTTCCCAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | ACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACTGCTCTGGCTCCCCAAAGGCCAGTGGGAAGGCATaGATGGGAAATGCTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TRWQHASLDCQNCSGSPKASGKA*MGNAGG Trigger: CCCTCCAGCATTTCCCATGCATGCCTTCCCACTGGC...CTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | AAGTACAGAAAAGCCAGAGACAAAAGCAGGTATTGCAGGCAGCAGACCTCTGGACCATCTGTGTGCTCGTaGGCAATCTGGCAGGCATGG | + |
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Preference number: 4 (lower is better) Translates to: KYRKARDKSRYCRQQTSGPSVCS*AIWQAW Trigger: CCATGCCTGCCAGATTGCTCACGAGCACACAGATGG...TCCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTCTCTGGCTTTTCTGTACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | GCACAGGTTGGGAAGGTGTCTAGAGGAAAAGCTACAGAAATGAGGGCAGAAAGACTGCATCTCTGTTGGTaGTCAGGGTGGGTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQVGKVSRGKATEMRAERLHLCW*SGWVAR Trigger: TCTGGCCACCCACCCTGAGCACCAACAGAGATGCAG...TCTTTCTGCCCTCATTTCTGTAGCTTTTCCTCTAGACACCTTCCCAACCTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | AAGTACAGAAAAGCCAGAGACAAAAGCAGGTATTGCAGGCAGCAGACCTCTGGAGGCATGCATGGGAAATaGTGGAGGGTCTTGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KYRKARDKSRYCRQQTSGGMHGK*WRVLSS Trigger: GCTGCTCAAGACCCTCCAGCATTTCCCATGCATGCC...TCCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTCTCTGGCTTTTCTGTACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | AGTACAGAAAAGCCAGAGACAAAAGCAGGTATTGCAGGCAGCAGACCTCTGGAGTCACCCAGAATGCTCTaGACCTCCTCTCTGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: STEKPETKAGIAGSRPLESPRML*TSSLHL Trigger: GAGATGCAGAGAGGAGGTGCAGAGCATTCTGGGTGA...CTCCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTCTCTGGCTTTTCTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| 3UTR CAA 72 bp | AACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATaGCCAAAACTGCTCTGGCTCCCCAAAGTTCATGCT | + |
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Preference number: 4 (lower is better) Translates to: NSRDQMATCFPG*PKLLWLPKVHA Trigger: AGCATGAACTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | TACCACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAATTGTCCTTCAGATGGTaGCCCCAAAGCCAGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: YHILTVGTRWQHASLDCQLSFRW*PQSQWE Trigger: TTCCCACTGGCTTTGGGGGCACCATCTGAAGGACAA...TTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | GCACAGGTTGGGAAGGTGTCTAGAGGAAAAGCTACAGAAATGAGGGCAGAAAGAGAATGTGTCCACCTCTaGACGCAGGTCCTCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: AQVGKVSRGKATEMRAERECVHL*TQVLIR Trigger: TCTGATGAGGACCTGCGTGCAGAGGTGGACACATTC...TCTTTCTGCCCTCATTTCTGTAGCTTTTCCTCTAGACACCTTCCCAACCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | CCACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAAGTGGGAAGGCATGCATaGGAAATGCTGGAGGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: PHSNSRDQMATCFPGLPKVGRHA*EMLEGL Trigger: AAGACCCTCCAGCATTTCCCATGCATGCCTTCCCAC...TTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | ACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACTGCTCTGGCTCCCCAAAGATCAATGAAACACAGTaGAAGATCTCCAGAGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TRWQHASLDCQNCSGSPKINETQ*KISRGW Trigger: CCACCCTCTGGAGATCTTCCACTGTGTTTCATTGAT...CTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | CACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACGCACCAGAAATAGACTaGGCAAGAAGGCCCATTGGA | + |
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Preference number: 4 (lower is better) Translates to: HILTVGTRWQHASLDCQNAPEID*ARRPIG Trigger: TCCAATGGGCCTTCTTGCTCAGTCTATTTCTGGTGC...GTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | CACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACTTCTTCCTGGCCTTCTaGAGCTCTTCCTCATTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HILTVGTRWQHASLDCQNFFLAF*SSSSFC Trigger: GCAGAATGAGGAAGAGCTGCAGAAGGCCAGGAAGAA...GTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | GTTCCTTCCTCTGGCTGGTACCAGATTTTAGTGTTAATTTTCTCCCAGCATGTGTCCAGAGGGTGGTCCTaGCCATCAAGCTTCTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VPSSGWYQILVLIFSQHVSRGWS*PSSFSH Trigger: ATGGGAGAAGCTTGATGGCCAGGACCACCCTCTGGA...CACATGCTGGGAGAAAATTAACACTAAAATCTGGTACCAGCCAGAGGAAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | TACCACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAACACAGATATTACTGGTaGATAGAGCCTCAGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: YHILTVGTRWQHASLDCQHRYYW*IEPQGL Trigger: GAGGCCCTGAGGCTCTATCCACCAGTAATATCTGTG...TTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | GTCCATTGTCCCAAGAGTCTAATAACTGAAGGGAGAGAAAGGTACAAGTGTCTCAGAAGCCTTTGGATCTaGTCTCCCCAGAACCACCTT | + |
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Preference number: 4 (lower is better) Translates to: VHCPKSLITEGRERYKCLRSLWI*SPQNHL Trigger: AAGGTGGTTCTGGGGAGATCAGATCCAAAGGCTTCT...GAGACACTTGTACCTTTCTCTCCCTTCAGTTATTAGACTCTTGGGACAATGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | AAGTACAGAAAAGCCAGAGACAAAAGCAGGTATTGCAGGCAGCAGACCTCTGGAGTCCAGTGTCATCAATaGAACACAGTGGAAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: KYRKARDKSRYCRQQTSGVQCHQ*NTVEDL Trigger: GAGATCTTCCACTGTGTTTCATTGATGACACTGGAC...TCCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTCTCTGGCTTTTCTGTACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR GCA 90 bp | AGTACAGAAAAGCCAGAGACAAAAGCAGGTATTGCAGGCAGCAGACCTCTGGAGGTGAGAAGAATCTGGTaGAAATCTAGAGGGGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: STEKPETKAGIAGSRPLEVRRIW*KSRGVK Trigger: TTTGACCCCTCTAGATTTGCACCAGATTCTTCTCAC...CTCCAGAGGTCTGCTGCCTGCAATACCTGCTTTTGTCTCTGGCTTTTCTGTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | GTCCATTGTCCCAAGAGTCTAATAACTGAAGGGAGAGAAAGGTACAAGTGTCTCATCATAGTGGAAGGCTaGAGTCAACATCCGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: VHCPKSLITEGRERYKCLIIVEG*SQHPPM Trigger: CATCGGCGGATGTTGACTCCAGCCTTCCACTATGAT...GAGACACTTGTACCTTTCTCTCCCTTCAGTTATTAGACTCTTGGGACAATGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | CCACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAAAAACACCTTTGGGTTTaGCCAGAAACGTGGGTTATG | + |
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Preference number: 4 (lower is better) Translates to: PHSNSRDQMATCFPGLPKKHLWV*PETWVM Trigger: CATAACCCACGTTTCTGGCCAAACCCAAAGGTGTTT...TTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTGG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | AAGGTACAAGTGTCTCCCTCTAAAATATATCTTCCTCTGTCAGTGCAATGGTTACCAGATGGTCCCATGTaGCAGAGGTTCCATCACCCA | + |
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Preference number: 4 (lower is better) Translates to: KVQVSPSKIYLPLSVQWLPDGPM*QRFHHP Trigger: TGGGTGATGGAACCTCTGTCACATGGGACCATCTGG...TAACCATTGCACTGACAGAGGAAGATATATTTTAGAGGGAGACACTTGTACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | AGAAAGGTACAAGTGTCTCCCTCTAAAATATATCTTCCTCTGTCAGTGCAATGGAAGATCTCCAGAGGGTaGTCCTGGCCATCAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RKVQVSPSKIYLPLSVQWKISRG*SWPSSF Trigger: GAAGCTTGATGGCCAGGACCACCCTCTGGAGATCTT...CCATTGCACTGACAGAGGAAGATATATTTTAGAGGGAGACACTTGTACCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | TCCTTCCTCTGGCTGGTACCAGATTTTAGTGTTAATTTTCTCCCAGCATGTGATAGTGTCTCTTCTTCCTaGCCTTCTGCAGCTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SFLWLVPDFSVNFLPACDSVSSS*PSAALP Trigger: AGGAAGAGCTGCAGAAGGCCAGGAAGAAGAGACACT...ATCACATGCTGGGAGAAAATTAACACTAAAATCTGGTACCAGCCAGAGGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | TTTCTGTATCAGTATTACTACTTCATAGAAAAGATGAGGCATATGCCAGAAAGCTGGGAAGGTGACAGGTaGGCTGAGCTCTCGACTCAC | + |
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Preference number: 4 (lower is better) Translates to: FLYQYYYFIEKMRHMPESWEGDR*AELSTH Trigger: GTGAGTCGAGAGCTCAGCTCACCTGTCACCTTCCCA...GCTTTCTGGCATATGCCTCATCTTTTCTATGAAGTAGTAATACTGATACAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | TTTCTGTATCAGTATTACTACTTCATAGAAAAGATGAGGCATATGCCAGAAAGCTGCCCCCAAAGCCAGTaGGAAGGCATGCATGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: FLYQYYYFIEKMRHMPESCPQSQ*EGMHGK Trigger: TTTCCCATGCATGCCTTCCCACTGGCTTTGGGGGCA...GCTTTCTGGCATATGCCTCATCTTTTCTATGAAGTAGTAATACTGATACAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | TTCACAGTTTGGCCCAAAGTAGCAAAAACTATTCATTTCTCTCTACCTTTCTGTAACATCCGCCGATGCTaGAACCACTTCTTCCCATTC | + |
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Preference number: 4 (lower is better) Translates to: FTVWPKVAKTIHFSLPFCNIRRC*NHFFPF Trigger: GAATGGGAAGAAGTGGTTCCAGCATCGGCGGATGTT...ACAGAAAGGTAGAGAGAAATGAATAGTTTTTGCTACTTTGGGCCAAACTGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR TCA 90 bp | TTTCTGTATCAGTATTACTACTTCATAGAAAAGATGAGGCATATGCCAGAAAGCGAGACTTCCTCATCTTaGTCACTCCATCTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: FLYQYYYFIEKMRHMPESETSSS*SLHLCA Trigger: AGCACACAGATGGAGTGATCAAGATGAGGAAGTCTC...GCTTTCTGGCATATGCCTCATCTTTTCTATGAAGTAGTAATACTGATACAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CCA 90 bp | TTCACAGTTTGGCCCAAAGTAGCAAAAACTATTCATTTCTCTCTACCTTTCTGTTCCTATCCTCCATTCTaGCAAACAAGAGGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: FTVWPKVAKTIHFSLPFCSYPPF*QTRGCP Trigger: TGGACATCCTCTTGTTTGCCAGAATGGAGGATAGGA...ACAGAAAGGTAGAGAGAAATGAATAGTTTTTGCTACTTTGGGCCAAACTGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 90 bp | TTCTCTACCCATATAAGAATCTGCTGGAGCTCCTTGTCCTTCAGATaGTGCCCCCAAAGCCAGTGGGAAGGCATGCATGGGAAATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: FSTHIRICWSSLSFR*CPQSQWEGMHGKCW Trigger: CCAGCATTTCCCATGCATGCCTTCCCACTGGCTTTGGGGGCACCATCTGAAGGACAAGGAGCTCCAGCAGATTCTTATATGGGTAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS GCA 90 bp | CACTGTAAGCAGGCACTTGGGAATTTCTCTACCCATATAAGAATCTaGTGGAGCTCCTTGTCCTTCAGATGGTGCCCCCAAAGCCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: HCKQALGNFSTHIRI*WSSLSFRWCPQSQW Trigger: CCACTGGCTTTGGGGGCACCATCTGAAGGACAAGGAGCTCCAGCAGATTCTTATATGGGTAGAGAAATTCCCAAGTGCCTGCTTACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 90 bp | TGTAAGCAGGCACTTGGGAATTTCTCTACCCATATAAGAATCTGCTaGAGCTCCTTGTCCTTCAGATGGTGCCCCCAAAGCCAGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: CKQALGNFSTHIRIC*SSLSFRWCPQSQWE Trigger: TTCCCACTGGCTTTGGGGGCACCATCTGAAGGACAAGGAGCTCCAGCAGATTCTTATATGGGTAGAGAAATTCCCAAGTGCCTGCTTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CAA 90 bp | TACCACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAGTGGCTGTGATACCTTaGGGTATGGAGCGTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: YHILTVGTRWQHASLDCQVAVIP*GMERPS Trigger: AGATGGACGCTCCATACCCAAAGGTATCACAGCCAC...TTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CAA 90 bp | TCCCTGGATTGCCAAAACTGCTCTGGCTCCCCAAAGTTCATGCTGAGTAGTTTTAGGGGTCAAACACCTTaGGGTTTGGCCAGAAACGTG | + |
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Preference number: 5 (lower is better) Translates to: SLDCQNCSGSPKFMLSSFRGQTP*GLARNV Trigger: CACGTTTCTGGCCAAACCCAAAGGTGTTTGACCCCT...AAAACTACTCAGCATGAACTTTGGGGAGCCAGAGCAGTTTTGGCAATCCAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CAA 90 bp | CACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACCAACTGAACACTGCCTaGGTAGCTGAAAGCACACTT | + |
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Preference number: 5 (lower is better) Translates to: HILTVGTRWQHASLDCQNQLNTA*VAESTL Trigger: AAGTGTGCTTTCAGCTACCAAGGCAGTGTTCAGTTG...GTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CAA 90 bp | CACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACACTGTAAGCAGGCACTaGGGAATTTCTCTACCCATA | + |
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Preference number: 5 (lower is better) Translates to: HILTVGTRWQHASLDCQNTVSRH*GISLPI Trigger: TATGGGTAGAGAAATTCCCAAGTGCCTGCTTACAGT...GTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CAA 90 bp | CACATTCTAACAGTAGGGACCAGATGGCAACATGCTTCCCTGGATTGCCAAAACCCAGGGAGCAAAGAATaGATAAATTCCAGAAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: HILTVGTRWQHASLDCQNPGSKE*INSRSL Trigger: AAGGCTTCTGGAATTTATCAATTCTTTGCTCCCTGG...GTTTTGGCAATCCAGGGAAGCATGTTGCCATCTGGTCCCTACTGTTAGAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 90 bp | AGTGTCATCAATGAAACACAGTGGAAGATCTCCAGAGGGTGGTCCTaGCCATCAAGCTTCTCCCATTTATCTAGCATTATATTGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: SVINETQWKISRGWS*PSSFSHLSSIILTE Trigger: CTCTGTCAATATAATGCTAGATAAATGGGAGAAGCTTGATGGCCAGGACCACCCTCTGGAGATCTTCCACTGTGTTTCATTGATGACACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS-3UTR CAA 90 bp | TTTCTGTATCAGTATTACTACTTCATAGAAAAGATGAGGCATATGCCAGAAAGCGAGCAAGAAGGCCCATaGGAAGAACCCAGAGATACC | + |
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Preference number: 5 (lower is better) Translates to: FLYQYYYFIEKMRHMPESEQEGP*EEPRDT Trigger: GGTATCTCTGGGTTCTTCCAATGGGCCTTCTTGCTC...GCTTTCTGGCATATGCCTCATCTTTTCTATGAAGTAGTAATACTGATACAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS TCA 72 bp | GACTTCCTCATCTTGATCACTCCATCTGTGTGCTCGTaGGCAATCTGGCAGGCATGGTGGGACAAACGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DFLILITPSVCS*AIWQAWWDKRP Trigger: TGGACGTTTGTCCCACCATGCCTGCCAGATTGCTCACGAGCACACAGATGGAGTGATCAAGATGAGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS GCA 72 bp | ATAAGAATCTGCTGGAGCTCCTTGTCCTTCAGATGGTaGCCCCAAAGCCAGTGGGAAGGCATGCATGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: IRICWSSLSFRW*PQSQWEGMHGK Trigger: TTTCCCATGCATGCCTTCCCACTGGCTTTGGGGGCACCATCTGAAGGACAAGGAGCTCCAGCAGATTCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 72 bp | TTCATAACAGTGTCCAGTGTCATCAATGAAACACAGTaGAAGATCTCCAGAGGGTGGTCCTGGCCATCAAGC | + |
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Preference number: 6 (lower is better) Translates to: FITVSSVINETQ*KISRGWSWPSS Trigger: GCTTGATGGCCAGGACCACCCTCTGGAGATCTTCCACTGTGTTTCATTGATGACACTGGACACTGTTATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS TCA 72 bp | GGTTATGATGTAGGCCATAAATGGAAATTGTGGCTGTaGTACCTTTGGGTATGGAGCGTCCATCTGGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GYDVGHKWKLWL*YLWVWSVHLGR Trigger: CCTTCCCAGATGGACGCTCCATACCCAAAGGTATCACAGCCACAATTTCCATTTATGGCCTACATCATAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 72 bp | GGTCCTCATCAGACAAGCTGTTCCTATCCTCCATTCTaGCAAACAAGAGGATGTCCAAGAAATCCAAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GPHQTSCSYPPF*QTRGCPRNPSV Trigger: GACACTTGGATTTCTTGGACATCCTCTTGTTTGCCAGAATGGAGGATAGGAACAGCTTGTCTGATGAGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 72 bp | AACAGCACCAGAAATAGACTGAGCAAGAAGGCCCATTaGAAGAACCCAGAGATACCATCCAAGTACCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: NSTRNRLSKKAH*KNPEIPSKYLV Trigger: TACAAGGTACTTGGATGGTATCTCTGGGTTCTTCCAATGGGCCTTCTTGCTCAGTCTATTTCTGGTGCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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| CDS CCA 72 bp | AATGAAACACAGTGGAAGATCTCCAGAGGGTGGTCCTaGCCATCAAGCTTCTCCCATTTATCTAGCATTATA | + |
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Preference number: 6 (lower is better) Translates to: NETQWKISRGWS*PSSFSHLSSII Trigger: TATAATGCTAGATAAATGGGAGAAGCTTGATGGCCAGGACCACCCTCTGGAGATCTTCCACTGTGTTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030487.3 |
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