Pregenerated sensors for CYP4A12B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078597Ensembl transcript IDs: ENSMUST00000094887.4
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAAGGTGGGTGGAGGTGAACAAGGTGAGAAGAAAGAATGAGATGTaGGCAGAAGGATTGGGGAAAAGAGTGAGTGACAGAAAGACAGAA | + |
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Preference number: 1 (lower is better) Translates to: RRWVEVNKVRRKNEM*AEGLGKRVSDRKTE Trigger: TTCTGTCTTTCTGTCACTCACTCTTTTCCCCAATCCTTCTGCTCACATCTCATTCTTTCTTCTCACCTTGTTCACCTCCACCCACCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 90 bp | GGTAAAAAGAGGCACAGCGATACCCAAGGAGTGATGGCATTGCAATaGACTCAGCTTCATTCCAGTGAAATCATCAAAAACACTCGATAT | + |
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Preference number: 1 (lower is better) Translates to: GKKRHSDTQGVMALQ*TQLHSSEIIKNTRY Trigger: ATATCGAGTGTTTTTGATGATTTCACTGGAATGAAGCTGAGTTCATTGCAATGCCATCACTCCTTGGGTATCGCTGTGCCTCTTTTTACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 90 bp | TACCCAAGGAGTGATGGCATTGCAATGAACTCAGCTTCATTCCAGTaGAATCATCAAAAACACTCGATATCTAGAATCATAAGAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: YPRSDGIAMNSASFQ*NHQKHSISRIIRAH Trigger: GTGTGCTCTTATGATTCTAGATATCGAGTGTTTTTGATGATTTCACTGGAATGAAGCTGAGTTCATTGCAATGCCATCACTCCTTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 90 bp | ATGAACTTTATTGTGGGGAAGATGGCAAGACTCTTAAATGTAAGCTaGAAGGTGGAGAGTTTGAAGGGGAGATTTATATGGATAGATGAG | + |
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Preference number: 1 (lower is better) Translates to: MNFIVGKMARLLNVS*KVESLKGRFIWIDE Trigger: CTCATCTATCCATATAAATCTCCCCTTCAAACTCTCCACCTTTCAGCTTACATTTAAGAGTCTTGCCATCTTCCCCACAATAAAGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGCAAGTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTAGGCAGCAGGCCATTTaGGCTGTCTTGTTCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RVQVREIIKVKGQTCSLVRQQAI*AVLFCE Trigger: TTCACAGAACAAGACAGCTCAAATGGCCTGCTGCCT...AACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAACTTGCACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAAAGGTCAAACATGCAGTCTGGTTAGGGACAGGTAGAGAGAAAAGCAAGGGGGAAAAGAGTGAGTaGCAGAAAGACAGAATGGCA | + |
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Preference number: 2 (lower is better) Translates to: KSKVKHAVWLGTGREKSKGEKSE*QKDRMA Trigger: TGCCATTCTGTCTTTCTGTCACTCACTCTTTTCCCC...CTTGCTTTTCTCTCTACCTGTCCCTAACCAGACTGCATGTTTGACCTTTGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR TCA 90 bp | AAGTCAAAGGTCAAACATGCAGTCTGGTTAGGGACAGGTAGAGAGAAAAGCAAGAGAAAGAATGAGATGTaGGCAGAAGGATTGGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KSKVKHAVWLGTGREKSKRKNEM*AEGLGK Trigger: TTTCCCCAATCCTTCTGCTCACATCTCATTCTTTCT...CTTGCTTTTCTCTCTACCTGTCCCTAACCAGACTGCATGTTTGACCTTTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR GCA 90 bp | GGCAAGACTCTTAAATGTAAGCTGAAAGGTGGAGAGTTTGAAGGGGAGATTTATGTCAAAGGTCAAACATaGAGTCTGGTTAGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: GKTLKCKLKGGEFEGEIYVKGQT*SLVRDR Trigger: CCTGTCCCTAACCAGACTGCATGTTTGACCTTTGAC...ATAAATCTCCCCTTCAAACTCTCCACCTTTCAGCTTACATTTAAGAGTCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR CAA 90 bp | AACAGGACCAGTATTACCCTTTTAGGCACAAAACAAGCATACACATaGGAAAGATGGAGAAATGATCTGGAGACAGAAGAGATGCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: NRTSITLLGTKQAYT*ERWRNDLETEEMLN Trigger: GTTAAGCATCTCTTCTGTCTCCAGATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACTGGTCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR TCA 90 bp | TATGAACTTTATTGTGGGGAAGATGGCAAGACTCTTAAATGTAAGCTGAAAGGTGATCTCAGAAGAAGTTaGAAAAGACTGACAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: YELYCGEDGKTLKCKLKGDLRRS*KRLTGK Trigger: CTTGCCTGTCAGTCTTTTTCAACTTCTTCTGAGATC...ACCTTTCAGCTTACATTTAAGAGTCTTGCCATCTTCCCCACAATAAAGTTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR CCA 90 bp | GGCAAGACTCTTAAATGTAAGCTGAAAGGTGGAGAGTTTGAAGGGGAGATTTATTACACATTGGAAAGATaGAGAAATGATCTGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GKTLKCKLKGGEFEGEIYYTLER*RNDLET Trigger: TGTCTCCAGATCATTTCTCCATCTTTCCAATGTGTA...ATAAATCTCCCCTTCAAACTCTCCACCTTTCAGCTTACATTTAAGAGTCTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR-3UTR TCA 90 bp | TATGAACTTTATTGTGGGGAAGATGGCAAGACTCTTAAATGTAAGCTGAAAGGTTCAGCTTCATTCCAGTaGAATCATCAAAAACACTCG | + |
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Preference number: 2 (lower is better) Translates to: YELYCGEDGKTLKCKLKGSASFQ*NHQKHS Trigger: CGAGTGTTTTTGATGATTTCACTGGAATGAAGCTGA...ACCTTTCAGCTTACATTTAAGAGTCTTGCCATCTTCCCCACAATAAAGTTCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR CCA 72 bp | CAGAAGAAGTTGAAAAAGACTGACAGGCAAGGAGACTaGAAGCCCAGCAGAAGGTGGGTGGAGGTGAACAAG | + |
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Preference number: 3 (lower is better) Translates to: QKKLKKTDRQGD*KPSRRWVEVNK Trigger: CTTGTTCACCTCCACCCACCTTCTGCTGGGCTTCCAGTCTCCTTGCCTGTCAGTCTTTTTCAACTTCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 72 bp | AGGAGGGCTCTTGAAACCAAGGAATGCAGCTATAGGTaGCGGAAAGGTAAAAAGAGGCACAGCGATACCCAA | + |
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Preference number: 3 (lower is better) Translates to: RRALETKECSYR*RKGKKRHSDTQ Trigger: TTGGGTATCGCTGTGCCTCTTTTTACCTTTCCGTCACCTATAGCTGCATTCCTTGGTTTCAAGAGCCCTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 72 bp | GGTGGAGAGTTTGAAGGGGAGATTTATATGGATAGATaGGGTGACAGTCAGGGAAGGTCTCAGTTAGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GGEFEGEIYMDR*GDSQGRSQLGW Trigger: CCAACCTAACTGAGACCTTCCCTGACTGTCACCTCATCTATCCATATAAATCTCCCCTTCAAACTCTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 72 bp | GTGGAGGTGAACAAGGTGAGAAGAAAGAATGAGATGTaGGCAGAAGGATTGGGGAAAAGAGTGAGTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: VEVNKVRRKNEM*AEGLGKRVSDR Trigger: TCTGTCACTCACTCTTTTCCCCAATCCTTCTGCTCACATCTCATTCTTTCTTCTCACCTTGTTCACCTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| 3UTR TCA 72 bp | AGGCACAGCGATACCCAAGGAGTGATGGCATTGCAATaGACTCAGCTTCATTCCAGTGAAATCATCAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: RHSDTQGVMALQ*TQLHSSEIIKN Trigger: GTTTTTGATGATTTCACTGGAATGAAGCTGAGTTCATTGCAATGCCATCACTCCTTGGGTATCGCTGTGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR TCA 90 bp | CAGAAAGACAGAATGGCAGGCAGCAGGCCATTTGAGCTGTCTTGTTCTGTGAAGGAACAGAGTCTGCCATaGTTTCCGTGTAAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QKDRMAGSRPFELSCSVKEQSLP*FPCKAS Trigger: TGAAGCCTTACACGGAAATCATGGCAGACTCTGTTC...CTTCACAGAACAAGACAGCTCAAATGGCCTGCTGCCTGCCATTCTGTCTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CCA 90 bp | GGAAGGTCTCAGTTAGGTTGGTTGAAAATTGGCTCTTTCAGATATGCATGTCCTGGAAGATCTCCAGGGTaGAATCCTGGCCAACAATCT | + |
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Preference number: 4 (lower is better) Translates to: GRSQLGWLKIGSFRYACPGRSPG*NPGQQS Trigger: AGATTGTTGGCCAGGATTCCACCCTGGAGATCTTCC...AGGACATGCATATCTGAAAGAGCCAATTTTCAACCAACCTAACTGAGACCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR TCA 90 bp | GGAAGGTCTCAGTTAGGTTGGTTGAAAATTGGCTCTTTCAGATATGCATGTCCTCCCATTTATCCAGCATaGCATGAACAGAGTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GRSQLGWLKIGSFRYACPPIYPA*HEQSLP Trigger: TGGCAGACTCTGTTCATGTCATGCTGGATAAATGGG...AGGACATGCATATCTGAAAGAGCCAATTTTCAACCAACCTAACTGAGACCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CCA 90 bp | AGGGTGCAAGTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTTATTTTCTGTCCAACTaGACACTGCCCTCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: RVQVREIIKVKGQTCSLVYFLSN*TLPSWL Trigger: CAGCCATGAGGGCAGTGTCCAGTTGGACAGAAAATA...AACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAACTTGCACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR TCA 90 bp | GTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTAGGGACAGGCATAAAAGGAGAGCATaGCATGGATACCTTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: VREIIKVKGQTCSLVRDRHKRRA*HGYLWV Trigger: TACCCAAAGGTATCCATGTCATGCTCTCCTTTTATG...CCTGTCCCTAACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR TCA 90 bp | AGGGTGCAAGTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTTTATCCAGCATGACATaGACAGAGTCTGCCATGATT | + |
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Preference number: 4 (lower is better) Translates to: RVQVREIIKVKGQTCSLVLSSMT*TESAMI Trigger: AATCATGGCAGACTCTGTTCATGTCATGCTGGATAA...AACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAACTTGCACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR TCA 90 bp | GGCAAGACTCTTAAATGTAAGCTGAAAGGTGGAGAGTTTGAAGGGGAGATTTATGACTCCTCCTTGATTTaGTCACTTGGTCTGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GKTLKCKLKGGEFEGEIYDSSLI*SLGLCD Trigger: ATCACACAGACCAAGTGATCAAATCAAGGAGGAGTC...ATAAATCTCCCCTTCAAACTCTCCACCTTTCAGCTTACATTTAAGAGTCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CCA 90 bp | GTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTAGGGACAGGAAGGAGAGCATGACATaGATACCTTTGGGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VREIIKVKGQTCSLVRDRKESMT*IPLGKE Trigger: TTCTTTACCCAAAGGTATCCATGTCATGCTCTCCTT...CCTGTCCCTAACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CAA 90 bp | CAGAAAGACAGAATGGCAGGCAGCAGGCCATTTGAGCTGTCTTGTTCTGTGAAGGATTTGGCCACACAGTaGGGTTGTGATGAAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: QKDRMAGSRPFELSCSVKDLATQ*GCDEGH Trigger: ATGGCCTTCATCACAACCCAACTGTGTGGCCAAATC...CTTCACAGAACAAGACAGCTCAAATGGCCTGCTGCCTGCCATTCTGTCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CAA 90 bp | AGGGTGCAAGTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTGAGCACAGAGGCTACTaGAAGGTACTCAGAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: RVQVREIIKVKGQTCSLVEHRGY*KVLRDA Trigger: AGCATCTCTGAGTACCTTCAAGTAGCCTCTGTGCTC...AACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAACTTGCACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CAA 90 bp | AGGGTGCAAGTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTAGGAACCATGAGCTTTaGGGTCTGATCTCCCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RVQVREIIKVKGQTCSLVRNHEL*GLISPE Trigger: TTCTGGGGAGATCAGACCCAAAAGCTCATGGTTCCT...AACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAACTTGCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CAA 90 bp | GTTAGGGAGATCATTAAAGTCAAAGGTCAAACATGCAGTCTGGTTAGGGACAGGATGACATGGATACCTTaGGGTAAAGAACGTCCATCA | + |
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Preference number: 5 (lower is better) Translates to: VREIIKVKGQTCSLVRDRMTWIP*GKERPS Trigger: TGATGGACGTTCTTTACCCAAAGGTATCCATGTCAT...CCTGTCCCTAACCAGACTGCATGTTTGACCTTTGACTTTAATGATCTCCCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CAA 90 bp | TATGAACTTTATTGTGGGGAAGATGGCAAGACTCTTAAATGTAAGCTGAAAGGTTTCTTGGTATGGGGATaGGGACTCTGGTGGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: YELYCGEDGKTLKCKLKGFLVWG*GLWWDL Trigger: CAGATCCCACCAGAGTCCCAATCCCCATACCAAGAA...ACCTTTCAGCTTACATTTAAGAGTCTTGCCATCTTCCCCACAATAAAGTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS-3UTR CAA 90 bp | GGCAAGACTCTTAAATGTAAGCTGAAAGGTGGAGAGTTTGAAGGGGAGATTTATAAGTGGATCCCATTCTaGGACTTCAACACAATTCTT | + |
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Preference number: 5 (lower is better) Translates to: GKTLKCKLKGGEFEGEIYKWIPF*DFNTIL Trigger: AAGAATTGTGTTGAAGTCCAAGAATGGGATCCACTT...ATAAATCTCCCCTTCAAACTCTCCACCTTTCAGCTTACATTTAAGAGTCTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS TCA 72 bp | ACTCTTCCTCATCCTGAAGTTGACTCCTCCTTGATTTaGTCACTTGGTCTGTGTGATCATGGGCAAGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: TLPHPEVDSSLI*SLGLCDHGQVG Trigger: GCCAACTTGCCCATGATCACACAGACCAAGTGATCAAATCAAGGAGGAGTCAACTTCAGGATGAGGAAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS GCA 72 bp | AAGCCCCATCTCCTAAGAGACTTTGGATCTCCTTCCTaGATCTCTGTTGATGTTCAGGATTTGTGGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KPHLLRDFGSPS*ISVDVQDLWPK Trigger: CTTTGGCCACAAATCCTGAACATCAACAGAGATGCAGGAAGGAGATCCAAAGTCTCTTAGGAGATGGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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| CDS CAA 72 bp | TATTGGAGCTTTTTGAGATGCAAGTGGATCCCATTCTaGGACTTCAACACAATTCTTGGTATGGGGATTGGG | + |
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Preference number: 6 (lower is better) Translates to: YWSFLRCKWIPF*DFNTILGMGIG Trigger: CCCAATCCCCATACCAAGAATTGTGTTGAAGTCCAAGAATGGGATCCACTTGCATCTCAAAAAGCTCCAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094887.4 |
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