Pregenerated sensors for CYP4A12A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066071Ensembl transcript IDs: ENSMUST00000084343.4
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAAGCGGTAGAAGAGAAGGAAATACACAGAAGAGAAAGGCAGGGTaGAGGTTAGGGAGATCATTAAGGTCAAAGGTCAAACATGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: TSGRREGNTQKRKAG*RLGRSLRSKVKHAV Trigger: GACTGCATGTTTGACCTTTGACCTTAATGATCTCCCTAACCTGCACCCTGCCTTTCTCTTCTGTGTATTTCCTTCTCTTCTACCGCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR TCA 90 bp | TACCCAAGGAGTGATGGCACTGCAATGACCTCAGCTTCATTCCAGTaGAATCATGAAAAACACTCGATATCTAGAATCACAAGAGCACAC | + |
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Preference number: 1 (lower is better) Translates to: YPRSDGTAMTSASFQ*NHEKHSISRITRAH Trigger: GTGTGCTCTTGTGATTCTAGATATCGAGTGTTTTTCATGATTTCACTGGAATGAAGCTGAGGTCATTGCAGTGCCATCACTCCTTGGGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR CCA 90 bp | AGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATaGAGAAATGATCTGGAGACAGAAGAGATGCTTAACAATGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SITLLGTKQAYTLER*RNDLETEEMLNNGV Trigger: AACACCATTGTTAAGCATCTCTTCTGTCTCCAGATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR-3UTR GCA 90 bp | AAGCCCAGCAGAAGGTGGGTGGAGGTGAACAAGGTGAGAAGAAAGAATGAGATGGAATGGCAGGCAGCATaGCATTTGAGCTGTCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: KPSRRWVEVNKVRRKNEMEWQAA*HLSCLV Trigger: GACAAGACAGCTCAAATGGCATGCTGCCTGCCATTC...CATCTCATTCTTTCTTCTCACCTTGTTCACCTCCACCCACCTTCTGCTGGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGCAGGTTAGGGAGATCATTAAGGTCAAAGGTCAAACATGCAGTCAGGTTAGGCAGCATGCCATTTaGGCTGTCTTGTCCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: RVQVREIIKVKGQTCSQVRQHAI*AVLSCE Trigger: TTCACAGGACAAGACAGCTCAAATGGCATGCTGCCT...AACCTGACTGCATGTTTGACCTTTGACCTTAATGATCTCCCTAACCTGCACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR-3UTR GCA 90 bp | CAGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAAAAGAGAAAGGCAGGGTaGAGGTTAGGGAGATCATTA | + |
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Preference number: 2 (lower is better) Translates to: QYYPFRHKTSIHIGKMEKKRKAG*RLGRSL Trigger: TAATGATCTCCCTAACCTGCACCCTGCCTTTCTCTT...TTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR-3UTR TCA 90 bp | AGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATTCAGCTTCATTCCAGTaGAATCATGAAAAACACTCG | + |
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Preference number: 2 (lower is better) Translates to: SITLLGTKQAYTLERWRNSASFQ*NHEKHS Trigger: CGAGTGTTTTTCATGATTTCACTGGAATGAAGCTGA...ATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR TCA 72 bp | AGAAAGGTAAAAAGAGGCACAGCGATACCCAAGGAGTaGTGGCACTGCAATGACCTCAGCTTCATTCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: RKVKRGTAIPKE*WHCNDLSFIPV Trigger: CACTGGAATGAAGCTGAGGTCATTGCAGTGCCATCACTCCTTGGGTATCGCTGTGCCTCTTTTTACCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR TCA 72 bp | AGGCACAGCGATACCCAAGGAGTGATGGCACTGCAATaGCCTCAGCTTCATTCCAGTGAAATCATGAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: RHSDTQGVMALQ*PQLHSSEIMKN Trigger: GTTTTTCATGATTTCACTGGAATGAAGCTGAGGTCATTGCAGTGCCATCACTCCTTGGGTATCGCTGTGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR TCA 72 bp | GGTGGAGAATTTGAAGGGGAGATTTATATGGATAGATaGGGTGACAGTCAGGGAAGGTCTCTGTTAGGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GGEFEGEIYMDR*GDSQGRSLLGW Trigger: CCAACCTAACAGAGACCTTCCCTGACTGTCACCTCATCTATCCATATAAATCTCCCCTTCAAATTCTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR TCA 72 bp | GTGGAGGTGAACAAGGTGAGAAGAAAGAATGAGATGTaGGCAGAAGGATTGGGGAAAAGAGTAAGTGACAGA | + |
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Preference number: 3 (lower is better) Translates to: VEVNKVRRKNEM*AEGLGKRVSDR Trigger: TCTGTCACTTACTCTTTTCCCCAATCCTTCTGCTCACATCTCATTCTTTCTTCTCACCTTGTTCACCTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| 3UTR TCA 72 bp | AGTGATGGCACTGCAATGACCTCAGCTTCATTCCAGTaGAATCATGAAAAACACTCGATATCTAGAATCACA | + |
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Preference number: 3 (lower is better) Translates to: SDGTAMTSASFQ*NHEKHSISRIT Trigger: TGTGATTCTAGATATCGAGTGTTTTTCATGATTTCACTGGAATGAAGCTGAGGTCATTGCAGTGCCATCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | GGAGGGCTCTTGAAACCAAGGAATGCAGCTATAGGTGATAGAAAGGTAAAAAGATGGGGATTGGGACTCTaGTGGGATCTGGCAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GGLLKPRNAAIGDRKVKRWGLGL*WDLAAA Trigger: AGCTGCTGCCAGATCCCACCAGAGTCCCAATCCCCA...TCTTTTTACCTTTCTATCACCTATAGCTGCATTCCTTGGTTTCAAGAGCCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | GCTCTTTCAGATATGCATGTCCTAATCTTGATAGAACTAAGAACAGGACCAGTATGCTTCCTGGGAATCTaGTGGAGCTCAGAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ALSDMHVLILIELRTGPVCFLGI*WSSEQR Trigger: CCTCTGCTCTGAGCTCCATCAGATTCCCAGGAAGCA...TACTGGTCCTGTTCTTAGTTCTATCAAGATTAGGACATGCATATCTGAAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | CTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATGATCTGGAGTGTCCAAAGAGCCAGTaGGAAGGTGGGGATGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLGTKQAYTLERWRNDLECPKSQ*EGGDGN Trigger: GTTCCCATCCCCACCTTCTCACTGGCTCTTTGGACA...CTCCAGATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | CAGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAAGAGCCAGTGAGAAGGTaGGGATGGGAACTGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: QYYPFRHKTSIHIGKMEKEPVRR*GWELLS Trigger: ACTCAGCAGTTCCCATCCCCACCTTCTCACTGGCTC...TTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | AGGGTGCAGGTTAGGGAGATCATTAAGGTCAAAGGTCAAACATGCAGTCAGGTTCTGTGGACAGGCACTTaGGAAATTCTTAATCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: RVQVREIIKVKGQTCSQVLWTGT*EILNPS Trigger: ACTAGGATTAAGAATTTCCCAAGTGCCTGTCCACAG...AACCTGACTGCATGTTTGACCTTTGACCTTAATGATCTCCCTAACCTGCACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | AGGTCAAAGGTCAAACATGCAGTCAGGTTAGGGACAGGTAGAGAGAAAAGCAAGGATGTTCAGGATTTGTaGCCAAAGCATAGAAGATCC | + |
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Preference number: 4 (lower is better) Translates to: RSKVKHAVRLGTGREKSKDVQDL*PKHRRS Trigger: GGATCTTCTATGCTTTGGCCACAAATCCTGAACATC...CTTGCTTTTCTCTCTACCTGTCCCTAACCTGACTGCATGTTTGACCTTTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | GGGAAGGTCTCTGTTAGGTTGGTTGAAAATTGGCTCTTTCAGATATGCATGTCCGAATCCTCCTTGATTTaGTCACTTGGTCTGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GKVSVRLVENWLFQICMSESSLI*SLGLCD Trigger: ATCACACAGACCAAGTGATCAAATCAAGGAGGATTC...GGACATGCATATCTGAAAGAGCCAATTTTCAACCAACCTAACAGAGACCTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | GCTCTTTCAGATATGCATGTCCTAATCTTGATAGAACTAAGAACAGGACCAGTACTCAGAGATGCTTCCTaGGAATCTGATGGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: ALSDMHVLILIELRTGPVLRDAS*ESDGAQ Trigger: CTGAGCTCCATCAGATTCCCAGGAAGCATCTCTGAG...TACTGGTCCTGTTCTTAGTTCTATCAAGATTAGGACATGCATATCTGAAAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | TATGAACTTTATTGTGGGGAAGATGGCAAGACTCTTAAACGTAAGCTGATAGGTGTCATAGTGGAAAGCTaGGGTCAACATTCGTCGGTG | + |
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Preference number: 4 (lower is better) Translates to: YELYCGEDGKTLKRKLIGVIVES*GQHSSV Trigger: CACCGACGAATGTTGACCCCAGCTTTCCACTATGAC...ACCTATCAGCTTACGTTTAAGAGTCTTGCCATCTTCCCCACAATAAAGTTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | GCTCTTTCAGATATGCATGTCCTAATCTTGATAGAACTAAGAACAGGACCAGTAAGCACAGAGGCTACTTaGAGGTACTCAGAGATGCTT | + |
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Preference number: 4 (lower is better) Translates to: ALSDMHVLILIELRTGPVSTEAT*RYSEML Trigger: AAGCATCTCTGAGTACCTTCAAGTAGCCTCTGTGCT...TACTGGTCCTGTTCTTAGTTCTATCAAGATTAGGACATGCATATCTGAAAGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | CAGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAACATGGCCCTCGAACATaGAAGTATCCACTTCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: QYYPFRHKTSIHIGKMEKHGPRT*KYPLQH Trigger: GTGCTGAAGTGGATACTTTCATGTTCGAGGGCCATG...TTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | CTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATGATCTGGAGTTCCTGCATCTCTGTTaGTGTTCAGGATTTGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGTKQAYTLERWRNDLEFLHLC*CSGFVA Trigger: GGCCACAAATCCTGAACATCAACAGAGATGCAGGAA...CTCCAGATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR GCA 90 bp | CTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATGATCTGGAGCAAACTGTTTCCCAATaGAGTTCCTTGCTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LLGTKQAYTLERWRNDLEQTVSQ*SSLLLL Trigger: CAGGAGGAGCAAGGAACTGCATTGGGAAACAGTTTG...CTCCAGATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | CAGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAAGAACAGAGTCTGCCATaGTTTCCGTATAAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: QYYPFRHKTSIHIGKMEKEQSLP*FPYKAS Trigger: TGAAGCCTTATACGGAAATCATGGCAGACTCTGTTC...TTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | AGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATATGATGTCATTCTGGTaGAAGATGTTCCGCACACGG | + |
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Preference number: 4 (lower is better) Translates to: SITLLGTKQAYTLERWRNMMSFW*KMFRTR Trigger: CCGTGTGCGGAACATCTTTCACCAGAATGACATCAT...ATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR TCA 90 bp | AGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATATCACTTGGTCTGTGTaGTCATGGGCAAGTTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SITLLGTKQAYTLERWRNITWSV*SWASLQ Trigger: CTGCAAACTTGCCCATGATCACACAGACCAAGTGAT...ATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | AGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATAGGATCAAACACCTCTaGATTTGGCCACACAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SITLLGTKQAYTLERWRNRIKHL*IWPHSW Trigger: CCAACTGTGTGGCCAAATCCAGAGGTGTTTGATCCT...ATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | CTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATGATCTGGAGTTCCATTTTCCATTCTaGCAAATAGGAGGATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLGTKQAYTLERWRNDLEFHFPF*QIGGCP Trigger: TGGACATCCTCCTATTTGCCAGAATGGAAAATGGAA...CTCCAGATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | TATGAACTTTATTGTGGGGAAGATGGCAAGACTCTTAAACGTAAGCTGATAGGTTTTTTGAGATGCAAGTaGATCCCATTCTTGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: YELYCGEDGKTLKRKLIGFLRCK*IPFLDF Trigger: GAAGTCCAAGAATGGGATCCACTTGCATCTCAAAAA...ACCTATCAGCTTACGTTTAAGAGTCTTGCCATCTTCCCCACAATAAAGTTCATA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR GCA 90 bp | AGTATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATTGGAGCTTTTTGAGATaGAAGTGGATCCCATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SITLLGTKQAYTLERWRNWSFLR*KWIPFL Trigger: CAAGAATGGGATCCACTTGCATCTCAAAAAGCTCCA...ATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS-3UTR CCA 90 bp | ATTACCCTTTTAGGCACAAAACAAGCATACACATTGGAAAGATGGAGAAATGATAAGGAGAGCATAACATaGATACCTTTGGGTAAAGAA | + |
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Preference number: 4 (lower is better) Translates to: ITLLGTKQAYTLERWRNDKESIT*IPLGKE Trigger: TTCTTTACCCAAAGGTATCCATGTTATGCTCTCCTT...ATCATTTCTCCATCTTTCCAATGTGTATGCTTGTTTTGTGCCTAAAAGGGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS TCA 72 bp | ACTCTTCCTCATCCTGAAGTTGAATCCTCCTTGATTTaGTCACTTGGTCTGTGTGATCATGGGCAAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: TLPHPEVESSLI*SLGLCDHGQVC Trigger: GCAAACTTGCCCATGATCACACAGACCAAGTGATCAAATCAAGGAGGATTCAACTTCAGGATGAGGAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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| CDS TCA 72 bp | GCACTTGGGAAATTCTTAATCCTAGTTAGAATATCTTaGAGGTCCTGGTCCTTTAAGATCTTGTGTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: ALGKFLILVRIS*RSWSFKILCPK Trigger: CTTTGGACACAAGATCTTAAAGGACCAGGACCTTCAAGATATTCTAACTAGGATTAAGAATTTCCCAAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084343.4 |
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