Pregenerated sensors for CYP4A10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066072Ensembl transcript IDs: ENSMUST00000058785.10, ENSMUST00000094886.4
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGGATGAGAGGACTCTCTaGAGTATTCTTCTGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKDERTL*SILLKK Trigger: CTTTTTCAGAAGAATACTCCAGAGAGTCCTCTCATC...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| 3UTR-3UTR TCA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAATACTGAACAGAGGATaGGAGGACTCTCTGGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: IRREGMRRVLALKQGNIPILNRG*EDSLEY Trigger: ATACTCCAGAGAGTCCTCTCATCCTCTGTTCAGTAT...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| 3UTR-3UTR TCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATATACTGAACAGAGGATaGGAGGACTCTCTGGAGTAT | + |
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Preference number: 2 (lower is better) Translates to: GNFIAERREDGETRVRINILNRG*EDSLEY Trigger: ATACTCCAGAGAGTCCTCTCATCCTCTGTTCAGTAT...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| 3UTR-3UTR GCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATAGGGGAATATTCCAGTaGCAAGGAATGATGATCTAT | + |
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Preference number: 2 (lower is better) Translates to: GNFIAERREDGETRVRINRGIFQ*QGMMIY Trigger: ATAGATCATCATTCCTTGGCACTGGAATATTCCCCT...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGTCCCCCAGGAGGCTCTaGACTTCCTCTCTGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKSPRRL*TSSLHL Trigger: GAGATGCAGAGAGGAAGTTCAGAGCCTCCTGGGGGA...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGGTGTCGGGGAGAGTCTaGTGCAAACCTGGAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKVSGRV*CKPGRV Trigger: GACCCTTCCAGGTTTGCACCAGACTCTCCCCGACAC...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGAAGGGCAGGAATGAGTaGCTGTGTCGGGGAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKKGRNE*LCRGES Trigger: AGACTCTCCCCGACACAGCCACTCATTCCTGCCCTT...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR GCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGGGAGGTGATGGGAACTaGTGGAAAGCCTTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKGGDGN*WKALSS Trigger: GCTACTCAAGGCTTTCCAGCAGTTCCCATCACCTCC...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGAGCATCCTCCTGTGCTaGAACCATGGCTGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKSILLC*NHGCPF Trigger: GAATGGACAGCCATGGTTCCAGCACAGGAGGATGCT...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGTCGGGGAGAGTCTaGTGCAAACCTGGAAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: IRREGMRRVLALKQGNIPVSGRV*CKPGRV Trigger: GACCCTTCCAGGTTTGCACCAGACTCTCCCCGACAC...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGGGTAGATCCCATTTTTaGACTTCAGCACAAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKGRSHF*TSAQVG Trigger: CCCGACTTGTGCTGAAGTCCAAAAATGGGATCTACC...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGGATCCTTTCTCAGCTTaGTCACTCCATCTGTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKDPFSA*SLHLCD Trigger: ATCACACAGATGGAGTGATCAAGCTGAGAAAGGATC...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR GCA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGGAGGTGATGGGAACTaGTGGAAAGCCTTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: IRREGMRRVLALKQGNIPGGDGN*WKALSS Trigger: GCTACTCAAGGCTTTCCAGCAGTTCCCATCACCTCC...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAAAACACCTCTGGATTTaGCCACACCTTCGGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: IRREGMRRVLALKQGNIPKHLWI*PHLRVV Trigger: CACAACCCGAAGGTGTGGCCAAATCCAGAGGTGTTT...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATTCCCCCAGGAGGCTCTaGACTTCCTCTCTGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: GNFIAERREDGETRVRINSPRRL*TSSLHL Trigger: GAGATGCAGAGAGGAAGTTCAGAGCCTCCTGGGGGA...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCACATAAATGGAGAGTGTaGCCTGGACACCTTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: IRREGMRRVLALKQGNIPHKWRV*PGHLWV Trigger: TACCCAAAGGTGTCCAGGTCACACTCTCCATTTATG...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGCCCCATTCTCCATTCTaGCAAATAAAAGGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKPHSPF*QIKGYP Trigger: TGGATATCCTTTTATTTGCCAGAATGGAGAATGGGG...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGATTAAGGAGATGTGTTaGAAGATCTCTATAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKIKEMC*KISIEE Trigger: CTCCTCTATAGAGATCTTTCAACACATCTCCTTAAT...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAAACGTCTCTTCTTCTTaGTCTTTTCCAGCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: IRREGMRRVLALKQGNIPNVSSS*SFPALP Trigger: AGGGAGAGCTGGAAAAGATCAAGAAGAAGAGACGTT...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATCTGCATCTCTGTTGGTaGTCAGGGTGTGTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GNFIAERREDGETRVRINLHLCW*SGCVAR Trigger: TCTGGCCACACACCCTGATCACCAACAGAGATGCAG...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGATTTCCTGTAGTTCTTaGTCACCTTTGAACTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKISCSS*SPLNFS Trigger: TGAGAAGTTCAAAGGTGACCAAGAACTACAGGAAAT...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATCCAGTGAAAAGGAGGTaGTGGGAACTGCTGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: GNFIAERREDGETRVRINPVKRR*WELLES Trigger: GCTTTCCAGCAGTTCCCATCACCTCCTTTTCACTGG...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | AAAAAGGTAGGTCACACCAACAACTTAGCTTTCTCCAGTGAAACTCTTCTCAGACCAGTGAAAAGGAGGTaGTGGGAACTGCTGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KKVGHTNNLAFSSETLLRPVKRR*WELLES Trigger: GCTTTCCAGCAGTTCCCATCACCTCCTTTTCACTGG...TCTGAGAAGAGTTTCACTGGAGAAAGCTAAGTTGTTGGTGTGACCTACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTCTGCATCTCTGTTGGTaGTCAGGGTGTGTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICLHLCW*SGCVAR Trigger: TCTGGCCACACACCCTGATCACCAACAGAGATGCAG...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATCATAAATGGAGAGTGTaGCCTGGACACCTTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: GNFIAERREDGETRVRINHKWRV*PGHLWV Trigger: TACCCAAAGGTGTCCAGGTCACACTCTCCATTTATG...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AAAAAGGTAGGTCACACCAACAACTTAGCTTTCTCCAGTGAAACTCTTCTCAGAAGTCTGGTGCAAACCTaGAAGGGTCAAACACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: KKVGHTNNLAFSSETLLRSLVQT*KGQTPL Trigger: CAGAGGTGTTTGACCCTTCCAGGTTTGCACCAGACT...TCTGAGAAGAGTTTCACTGGAGAAAGCTAAGTTGTTGGTGTGACCTACCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTAAGGGCAGGAATGAGTaGCTGTGTCGGGGAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICKGRNE*LCRGES Trigger: AGACTCTCCCCGACACAGCCACTCATTCCTGCCCTT...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR GCA 90 bp | AAAAAGGTAGGTCACACCAACAACTTAGCTTTCTCCAGTGAAACTCTTCTCAGATCTGAACTTCCTCTCTaGATCTCTGTTGGTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: KKVGHTNNLAFSSETLLRSELPL*ISVGDQ Trigger: CTGATCACCAACAGAGATGCAGAGAGGAAGTTCAGA...TCTGAGAAGAGTTTCACTGGAGAAAGCTAAGTTGTTGGTGTGACCTACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AAAAAGGTAGGTCACACCAACAACTTAGCTTTCTCCAGTGAAACTCTTCTCAGATCTAGGAAAGGCACTTaGGAAGTTCTCTATGCACGA | + |
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Preference number: 4 (lower is better) Translates to: KKVGHTNNLAFSSETLLRSRKGT*EVLYAR Trigger: TCGTGCATAGAGAACTTCCCAAGTGCCTTTCCTAGA...TCTGAGAAGAGTTTCACTGGAGAAAGCTAAGTTGTTGGTGTGACCTACCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTAAACACCTCTGGATTTaGCCACACCTTCGGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICKHLWI*PHLRVV Trigger: CACAACCCGAAGGTGTGGCCAAATCCAGAGGTGTTT...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTAGTCTGGTGCAAACCTaGAAGGGTCAAACACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICSLVQT*KGQTPL Trigger: CAGAGGTGTTTGACCCTTCCAGGTTTGCACCAGACT...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTGGTAGATCCCATTTTTaGACTTCAGCACAAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICGRSHF*TSAQVG Trigger: CCCGACTTGTGCTGAAGTCCAAAAATGGGATCTACC...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTAACGTCTCTTCTTCTTaGTCTTTTCCAGCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICNVSSS*SFPALP Trigger: AGGGAGAGCTGGAAAAGATCAAGAAGAAGAGACGTT...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR GCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTTCTGAACTTCCTCTCTaGATCTCTGTTGGTGATCAG | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICSELPL*ISVGDQ Trigger: CTGATCACCAACAGAGATGCAGAGAGGAAGTTCAGA...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATATTTCCTGTAGTTCTTaGTCACCTTTGAACTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: GNFIAERREDGETRVRINISCSS*SPLNFS Trigger: TGAGAAGTTCAAAGGTGACCAAGAACTACAGGAAAT...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTTCTAGGAAAGGCACTTaGGAAGTTCTCTATGCACGA | + |
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Preference number: 4 (lower is better) Translates to: WENYLGAFRDLNDVISICSRKGT*EVLYAR Trigger: TCGTGCATAGAGAACTTCCCAAGTGCCTTTCCTAGA...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CCA 90 bp | AAAAAGGTAGGTCACACCAACAACTTAGCTTTCTCCAGTGAAACTCTTCTCAGACCCCATTCTCCATTCTaGCAAATAAAAGGATATCCA | + |
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Preference number: 4 (lower is better) Translates to: KKVGHTNNLAFSSETLLRPHSPF*QIKGYP Trigger: TGGATATCCTTTTATTTGCCAGAATGGAGAATGGGG...TCTGAGAAGAGTTTCACTGGAGAAAGCTAAGTTGTTGGTGTGACCTACCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR TCA 90 bp | AAAAAGGTAGGTCACACCAACAACTTAGCTTTCTCCAGTGAAACTCTTCTCAGAATTAAGGAGATGTGTTaGAAGATCTCTATAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KKVGHTNNLAFSSETLLRIKEMC*KISIEE Trigger: CTCCTCTATAGAGATCTTTCAACACATCTCCTTAAT...TCTGAGAAGAGTTTCACTGGAGAAAGCTAAGTTGTTGGTGTGACCTACCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CAA 90 bp | ATTAGAAGAGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAAACTGCTGGAAAGCCTaGAGTAGCCATTGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: IRREGMRRVLALKQGNIPNCWKA*SSHCLW Trigger: CCACAGGCAATGGCTACTCAAGGCTTTCCAGCAGTT...TGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCTCTTCTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CAA 90 bp | AGAGGGGATGAGGAGGGTGCTGGCTTTGAAGCAGGGGAATATTCCAGTGCCAAGAGTTCTTGGTCACCTTaGAACTTCTCATGCCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: RGDEEGAGFEAGEYSSAKSSWSP*NFSCPK Trigger: CTTTGGGCATGAGAAGTTCAAAGGTGACCAAGAACT...CTTGGCACTGGAATATTCCCCTGCTTCAAAGCCAGCACCCTCCTCATCCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS TCA 90 bp | TCTTTTCCAGCTCTCCCTCATCCTGCAGCTGATCCTTTCTCAGCTTaGTCACTCCATCTGTGTGATCATGGGCAAGTTGACAAGCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SFPALPHPAADPFSA*SLHLCDHGQVDKLV Trigger: AACAAGCTTGTCAACTTGCCCATGATCACACAGATGGAGTGATCAAGCTGAGAAAGGATCAGCTGCAGGATGAGGGAGAGCTGGAAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS CCA 90 bp | AGATATTCCTCACACGGGAGTGAAATAGGTTATTCAAGTCCCCAATaGCCTGGAGGTAGGTCCTGTAATTTCCATCTACCTGAACACTGC | + |
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Preference number: 5 (lower is better) Translates to: RYSSHGSEIGYSSPQ*PGGRSCNFHLPEHC Trigger: GCAGTGTTCAGGTAGATGGAAATTACAGGACCTACCTCCAGGCCATTGGGGACTTGAATAACCTATTTCACTCCCGTGTGAGGAATATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CAA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATAACTGCTGGAAAGCCTaGAGTAGCCATTGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: GNFIAERREDGETRVRINNCWKA*SSHCLW Trigger: CCACAGGCAATGGCTACTCAAGGCTTTCCAGCAGTT...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS TCA 90 bp | AGTTCTCTATGCACGACACAATTTCCTGTAGTTCTTGGTCACCTTTaGACTTCTCATGCCCAAAGAACCAGTGAAAAGGAGGTGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: SSLCTTQFPVVLGHL*TSHAQRTSEKEVMG Trigger: TCCCATCACCTCCTTTTCACTGGTTCTTTGGGCATGAGAAGTTCAAAGGTGACCAAGAACTACAGGAAATTGTGTCGTGCATAGAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CAA 90 bp | GGGAACTTTATTGCAGAAAGGAGGGAAGATGGAGAAACTCGTGTGAGGATTAATAGTTCTTGGTCACCTTaGAACTTCTCATGCCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: GNFIAERREDGETRVRINSSWSP*NFSCPK Trigger: CTTTGGGCATGAGAAGTTCAAAGGTGACCAAGAACT...ATTAATCCTCACACGAGTTTCTCCATCTTCCCTCCTTTCTGCAATAAAGTTCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS CCA 90 bp | GACAAGCTTGTTTGGCCAAGCGGCCATTGGAAGAAAGTTTGTAGATaGTATCATTCTGATGAAAGATATTCCTCACACGGGAGTGAAATA | + |
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Preference number: 5 (lower is better) Translates to: DKLVWPSGHWKKVCR*YHSDERYSSHGSEI Trigger: TATTTCACTCCCGTGTGAGGAATATCTTTCATCAGAATGATACCATCTACAAACTTTCTTCCAATGGCCGCTTGGCCAAACAAGCTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS-3UTR CAA 90 bp | TGGGAAAACTATCTTGGAGCTTTTAGGGATCTTAATGATGTCATAAGCATCTGTAAACGTCTCTTCTTCTaGATCTTTTCCAGCTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: WENYLGAFRDLNDVISICKRLFF*IFSSSP Trigger: GGGAGAGCTGGAAAAGATCAAGAAGAAGAGACGTTT...ACAGATGCTTATGACATCATTAAGATCCCTAAAAGCTCCAAGATAGTTTTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS TCA 72 bp | GCTCTCCCTCATCCTGCAGCTGATCCTTTCTCAGCTTaGTCACTCCATCTGTGTGATCATGGGCAAGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: ALPHPAADPFSA*SLHLCDHGQVD Trigger: GTCAACTTGCCCATGATCACACAGATGGAGTGATCAAGCTGAGAAAGGATCAGCTGCAGGATGAGGGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS TCA 72 bp | TGCACGACACAATTTCCTGTAGTTCTTGGTCACCTTTaGACTTCTCATGCCCAAAGAACCAGTGAAAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: CTTQFPVVLGHL*TSHAQRTSEKE Trigger: CTCCTTTTCACTGGTTCTTTGGGCATGAGAAGTTCAAAGGTGACCAAGAACTACAGGAAATTGTGTCGTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS CCA 72 bp | GGGCAAGTTGACAAGCTTGTTTGGCCAAGCGGCCATTaGAAGAAAGTTTGTAGATGGTATCATTCTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: GQVDKLVWPSGH*KKVCRWYHSDE Trigger: TTCATCAGAATGATACCATCTACAAACTTTCTTCCAATGGCCGCTTGGCCAAACAAGCTTGTCAACTTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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| CDS CCA 72 bp | AAGTTCTCTATGCACGACACAATTTCCTGTAGTTCTTaGTCACCTTTGAACTTCTCATGCCCAAAGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: KFSMHDTISCSS*SPLNFSCPKNQ Trigger: CTGGTTCTTTGGGCATGAGAAGTTCAAAGGTGACCAAGAACTACAGGAAATTGTGTCGTGCATAGAGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058785.10 ENSMUST00000094886.4 |
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