Pregenerated sensors for CYP46A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021259Ensembl transcript IDs: ENSMUST00000021684.6, ENSMUST00000221708.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGCAGGCGAGGGGACAGGGCTCGCCAGGAGCCATCGTGGAAGGTaGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAAT | + |
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Preference number: 1 (lower is better) Translates to: EAGEGTGLARSHRGR*QKGQGCRWVAMGSN Trigger: ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACGATGGCTCCTGGCGAGCCCTGTCCCCTCGCCTGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR CCA 90 bp | GGAGCCATCGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTaGCCATGGGCAGTAATGGGGGCCAATGAGGCCCTGGTCCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: GAIVEGGRRVRGAGG*PWAVMGANEALVQG Trigger: TCCTTGGACCAGGGCCTCATTGGCCCCCATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACGATGGCTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR CCA 90 bp | AACCGGGTGCCAGAGAGAAGGTGGGAAGCAGGAGGGACTGCTCAGTaGGCACAGGGTCACCTCAGGGTTGAAGAAAGGCTCTGGGACTCA | + |
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Preference number: 1 (lower is better) Translates to: NRVPERRWEAGGTAQ*AQGHLRVEERLWDS Trigger: TGAGTCCCAGAGCCTTTCTTCAACCCTGAGGTGACCCTGTGCCCACTGAGCAGTCCCTCCTGCTTCCCACCTTCTCTCTGGCACCCGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR GCA 90 bp | GCTGCCTTGGCCAGGATGTCGATGGTGGCACAGGTCAGCATGTCCTaGATGGACACGGGTGTCTGTCCATCTGCCTTAGCTTCTAGGATT | + |
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Preference number: 1 (lower is better) Translates to: AALARMSMVAQVSMS*MDTGVCPSALASRI Trigger: AATCCTAGAAGCTAAGGCAGATGGACAGACACCCGTGTCCATGCAGGACATGCTGACCTGTGCCACCATCGACATCCTGGCCAAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR GCA 90 bp | ACGGGTGTCTGTCCATCTGCCTTAGCTTCTAGGATTTCCACCAGCTaGTCCGCCTTCTCGTTGAACGTCTCCATCAGGCTGACCAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: TGVCPSALASRISTS*SAFSLNVSIRLTKE Trigger: CTCCTTGGTCAGCCTGATGGAGACGTTCAACGAGAAGGCGGAGCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGATGGACAGACACCCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR CCA 90 bp | GAAGTTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTaGGAGTCAGGCAGGGCCCACCAGAAAGAGCTGAAAAGCCAGCGA | + |
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Preference number: 1 (lower is better) Translates to: EVRRFGRDDGSCGDS*ESGRAHQKELKSQR Trigger: TCGCTGGCTTTTCAGCTCTTTCTGGTGGGCCCTGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR CCA 90 bp | GGGCACAGGGTCACCTCAGGGTTGAAGAAAGGCTCTGGGACTCAGTaGTGTGATATTGCCAGATGTAGCCAGACTCATGGGGTGGATGTA | + |
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Preference number: 1 (lower is better) Translates to: GHRVTSGLKKGSGTQ*CDIARCSQTHGVDV Trigger: TACATCCACCCCATGAGTCTGGCTACATCTGGCAATATCACACCACTGAGTCCCAGAGCCTTTCTTCAACCCTGAGGTGACCCTGTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR-3UTR GCA 90 bp | TTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGAGTCAGGCACAGAAGGGTCAGGGGTaGCGGTGGGTGGCCATGGGC | + |
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Preference number: 2 (lower is better) Translates to: FGGLGETMVVVVIAGSQAQKGQG*RWVAMG Trigger: GCCCATGGCCACCCACCGGCACCCCTGACCCTTCTG...TGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR TCA 90 bp | TTCCAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGAAGCACTGAGGGTGTaGAGCAGGCGAGGGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: FQTLVSNRGLRGKVHTDPEALRV*SRRGDR Trigger: CCTGTCCCCTCGCCTGCTTCACACCCTCAGTGCTTC...AGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR TCA 90 bp | CAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCGATGACAGGAAGCACTaGGGGTGTGAAGCAGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: QTLVSNRGLRGKVHTDPADDRKH*GCEAGE Trigger: CTCGCCTGCTTCACACCCTCAGTGCTTCCTGTCATC...GGCAGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGCGGCTGAAGGCCAAGTCCATGACTTTCCTCTGCTTGTACCAGCGCCCGAGACAGAAACCGGGTaGCAGAGAGAAGGTGGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GAAAEGQVHDFPLLVPAPETETG*QREGGK Trigger: CTTCCCACCTTCTCTCTGGCACCCGGTTTCTGTCTC...GGGCGCTGGTACAAGCAGAGGAAAGTCATGGACTTGGCCTTCAGCCGCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCCTGAGTTGTGGTGATAGCTaGGAGTCAGGCAGGGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: TLVSNRGLRGKVHTDPALSCGDS*ESGRAH Trigger: GTGGGCCCTGCCTGACTCCCAGCTATCACCACAACT...CAGGGCAGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR CAA 90 bp | TCTGCCTTAGCTTCTAGGATTTCCACCAGCTGCTCCGCCTTCTCGTaGAACGTCTCCATCAGGCTGACCAAGGAGCTGCGGCTGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SALASRISTSCSAFS*NVSIRLTKELRLKA Trigger: GGCCTTCAGCCGCAGCTCCTTGGTCAGCCTGATGGAGACGTTCAACGAGAAGGCGGAGCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR CAA 90 bp | GGGAAGCAGGAGGGACTGCTCAGTGGGCACAGGGTCACCTCAGGGTaGAAGAAAGGCTCTGGGACTCAGTGGTGTGATATTGCCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: GKQEGLLSGHRVTSG*KKGSGTQWCDIARC Trigger: ACATCTGGCAATATCACACCACTGAGTCCCAGAGCCTTTCTTCAACCCTGAGGTGACCCTGTGCCCACTGAGCAGTCCCTCCTGCTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGAGGGTGTGGCCAGTGCAGAAGTTCGGAGGTTTGGGAGAGACGATGGTAGTCGCCAGGAGCCATCGTaGAAGGTGGCAGAAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FEGVASAEVRRFGRDDGSRQEPS*KVAEGS Trigger: TGACCCTTCTGCCACCTTCCACGATGGCTCCTGGCG...ACTACCATCGTCTCTCCCAAACCTCCGAACTTCTGCACTGGCCACACCCTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTTGGCCAGGATGTCGATGGTGGCACAGGTCAGCATGTCCTGCATGGACGGCTCTGGGACTCAGTaGTGTGATATTGCCAGATGT | + |
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Preference number: 2 (lower is better) Translates to: AALARMSMVAQVSMSCMDGSGTQ*CDIARC Trigger: ACATCTGGCAATATCACACCACTGAGTCCCAGAGCC...GTCCATGCAGGACATGCTGACCTGTGCCACCATCGACATCCTGGCCAAGGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR-3UTR CCA 90 bp | TTCCAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCTGGCAGGGCAGCTaGTCACATGAGCAAACATTC | + |
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Preference number: 2 (lower is better) Translates to: FQTLVSNRGLRGKVHTDPAWQGS*SHEQTF Trigger: GAATGTTTGCTCATGTGACCAGCTGCCCTGCCAGGC...AGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR CAA 90 bp | AGGGTGTCTCTTTTGAGGGTGTGGCCAGTGCAGAAGTTCGGAGGTTaGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGAGTCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: RVSLLRVWPVQKFGG*GETMVVVVIAGSQA Trigger: TGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAACTTCTGCACTGGCCACACCCTCAAAAGAGACACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGACACGGGTGTCTGTCCATCTGCCTTAGCTTCTAGGATTTCCACCAGCTGCGTGTCCTGTTCCCAGTaGAGTCCTCCTTCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: MDTGVCPSALASRISTSCVSCSQ*SPPSSG Trigger: ACCAGAGGAAGGAGGACTCCACTGGGAACAGGACAC...GCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGATGGACAGACACCCGTGTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGCGGCTGAAGGCCAAGTCCATGACTTTCCTCTGCTTGTACCAGCGCCCAGAGGAAGTGTGACATaGATTTTAAAACATCGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GAAAEGQVHDFPLLVPAPRGSVT*ILKHRV Trigger: CACACGATGTTTTAAAATGCATGTCACACTTCCTCT...GGGCGCTGGTACAAGCAGAGGAAAGTCATGGACTTGGCCTTCAGCCGCAGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGTCTCTTTTGAGGGTGTaGCCAGTGCAGAAGTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: EQTFTIQCGQCVRGRSTESLLRV*PVQKFG Trigger: TCCGAACTTCTGCACTGGCCACACCCTCAAAAGAGA...CTCTGTGCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR CCA 90 bp | TTTAGCAGGATAAAGAGGAAGTGTGACATGCATTTTAAAACATCGTGTGCATCCTTCCAATCCCGAGAGTaGGATCACCATGCACAGGGC | + |
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Preference number: 2 (lower is better) Translates to: FSRIKRKCDMHFKTSCASFQSRE*DHHAQG Trigger: GCCCTGTGCATGGTGATCCCACTCTCGGGATTGGAA...GGATGCACACGATGTTTTAAAATGCATGTCACACTTCCTCTTTATCCTGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR CCA 72 bp | AGCAGGCGAGGGGACAGGGCTCGCCAGGAGCCATCGTaGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: SRRGDRARQEPS*KVAEGSGVPVG Trigger: ACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACGATGGCTCCTGGCGAGCCCTGTCCCCTCGCCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR GCA 72 bp | GCCAGGATGTCGATGGTGGCACAGGTCAGCATGTCCTaGATGGACACGGGTGTCTGTCCATCTGCCTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: ARMSMVAQVSMS*MDTGVCPSALA Trigger: AGCTAAGGCAGATGGACAGACACCCGTGTCCATGCAGGACATGCTGACCTGTGCCACCATCGACATCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR CCA 72 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTaGCCTGGCTGTGAGAAGCAAACAGGGCTTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QCVRGRSTEERP*PGCEKQTGLPG Trigger: CCCAGGAAGCCCTGTTTGCTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR CAA 90 bp | CAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCTGGGGGACATGTCACTaGAAGAGTTTAGGGAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: QTLVSNRGLRGKVHTDPAWGTCH*KSLGSE Trigger: CTCACTCCCTAAACTCTTCAAGTGACATGTCCCCCA...GGCAGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR CAA 90 bp | ACGGGTGTCTGTCCATCTGCCTTAGCTTCTAGGATTTCCACCAGCTGCTCCGCCCTCAGTGGTGTGATATaGCCAGATGTAGCCAGACTC | + |
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Preference number: 3 (lower is better) Translates to: TGVCPSALASRISTSCSALSGVI*PDVARL Trigger: GAGTCTGGCTACATCTGGCAATATCACACCACTGAG...GGCGGAGCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGATGGACAGACACCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR GCA 72 bp | TGTCCATCTGCCTTAGCTTCTAGGATTTCCACCAGCTaGTCCGCCTTCTCGTTGAACGTCTCCATCAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: CPSALASRISTS*SAFSLNVSIRL Trigger: CAGCCTGATGGAGACGTTCAACGAGAAGGCGGAGCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGATGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| 3UTR CCA 72 bp | AGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTaGGAGTCAGGCAGGGCCCACCAGAAAGAGCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: RFGRDDGSCGDS*ESGRAHQKELK Trigger: TTTCAGCTCTTTCTGGTGGGCCCTGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| 3UTR-3UTR CAA 90 bp | GAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGCAGAAGTTCGGAGGTTaGGGAGAGACGATGGTAGTT | + |
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Preference number: 3 (lower is better) Translates to: EQTFTIQCGQCVRGRSTEQKFGG*GETMVV Trigger: AACTACCATCGTCTCTCCCAAACCTCCGAACTTCTG...CTCTGTGCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CCA 90 bp | GCTGCCTTGGCCAGGATGTCGATGGTGGCACAGGTCAGCATGTCCTGCATGGACGTCCAAGAAGGAAGCTaGGCCGCGGCGGCCCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: AALARMSMVAQVSMSCMDVQEGS*AAAARG Trigger: TCCCCGGGCCGCCGCGGCCCAGCTTCCTTCTTGGAC...GTCCATGCAGGACATGCTGACCTGTGCCACCATCGACATCCTGGCCAAGGCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS-3UTR GCA 90 bp | TTCCAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTCGAGCAGGACGGCGCTaGCGAGCAGCAGCAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: FQTLVSNRGLRGKVHTDPRAGRR*RAAAAR Trigger: CCGGGCTGCTGCTGCTCGGCAGCGCCGTCCTGCTCG...AGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | GAACGTCTCCATCAGGCTGACCAAGGAGCTGCGGCTGAAGGCCAAGTCCATGACCGGCTGCGAGCGCGATaGACGAAGGTGCAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: ERLHQADQGAAAEGQVHDRLRAR*TKVQQR Trigger: CCTCTGCTGCACCTTCGTGCATCGCGCTCGCAGCCG...GTCATGGACTTGGCCTTCAGCCGCAGCTCCTTGGTCAGCCTGATGGAGACGTTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS-3UTR GCA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGCTTCGCGGCGGCGCTaGACCCAATCCTTCCCCACC | + |
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Preference number: 4 (lower is better) Translates to: CGQCVRGRSTEERPWPGCASRRR*TQSFPT Trigger: GGTGGGGAAGGATTGGGTGCAGCGCCGCCGCGAAGC...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTCCCGGGGCCTCAGGGTaGACAGCACGGGGTCCAATG | + |
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Preference number: 4 (lower is better) Translates to: CGQCVRGRSTEERPWPGCPGASG*TARGPM Trigger: CATTGGACCCCGTGCTGTGCACCCTGAGGCCCCGGG...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTCGGCTGCGAGCGCGATaGACGAAGGTGCAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CGQCVRGRSTEERPWPGCRLRAR*TKVQQR Trigger: CCTCTGCTGCACCTTCGTGCATCGCGCTCGCAGCCG...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | CGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATACCTGCGACAGATACTaGAGTCTCCCCAGATCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RGRWQKGQGCRWVAMGSNTCDRY*SLPRSS Trigger: CGAGGATCTGGGGAGACTGCAGTATCTGTCGCAGGT...ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CCA 90 bp | TTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGAGTCAGGCAGTCCAAGAAGGAAGCTaGGCCGCGGCGGCCCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FGGLGETMVVVVIAGSQAVQEGS*AAAARG Trigger: TCCCCGGGCCGCCGCGGCCCAGCTTCCTTCTTGGAC...TGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR TCA 90 bp | CGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATAAAAGGGAAAGTAAGTaGACCGTGGCTTGGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: RGRWQKGQGCRWVAMGSNKRESK*TVAWAL Trigger: GAGCGCCCAAGCCACGGTTCACTTACTTTCCCTTTT...ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTCGCGATGCACGAAGGTaGAGCAGAGGCCGAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: CGQCVRGRSTEERPWPGCRDARR*SRGRRR Trigger: TCGCCTTCGGCCTCTGCTGCACCTTCGTGCATCGCG...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR TCA 90 bp | CGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATTATTGCCAGGGACTCTaGCCCCATCAATCAAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RGRWQKGQGCRWVAMGSNYCQGL*PHQSRS Trigger: AGACCTTGATTGATGGGGTCAGAGTCCCTGGCAATA...ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGAGCGTAGCCTGCTCTTaGAGCCCAAAGCGCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QCVRGRSTEERPWPGCEKSVACS*SPKRCP Trigger: TGGGCAGCGCTTTGGGCTGCAAGAGCAGGCTACGCT...CTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGGGCTTGAGCGTAGCCTaGTCTTGCAGCCCAAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: QCVRGRSTEERPWPGCEKGLSVA*SCSPKR Trigger: GCGCTTTGGGCTGCAAGAGCAGGCTACGCTCAAGCC...CTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR TCA 90 bp | TGGTGGCACAGGTCAGCATGTCCTGCATGGACACGGGTGTCTGTCCATCTGCCTTCCCCAAACACAGTCTaGAGCGCGCGGTACATCTTG | + |
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Preference number: 4 (lower is better) Translates to: WWHRSACPAWTRVSVHLPSPNTV*SARYIL Trigger: CAAGATGTACCGCGCGCTTCAGACTGTGTTTGGGGA...AGGCAGATGGACAGACACCCGTGTCCATGCAGGACATGCTGACCTGTGCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTCTGGGACTCAGTGGTGTGATATTGCCAGATGTAGCCAGACTCATGGGGCGCGATGCACGAAGGTaGAGCAGAGGCCGAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: KALGLSGVILPDVARLMGRDARR*SRGRRR Trigger: TCGCCTTCGGCCTCTGCTGCACCTTCGTGCATCGCG...CCCCATGAGTCTGGCTACATCTGGCAATATCACACCACTGAGTCCCAGAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS-3UTR GCA 90 bp | TTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGAGTCAGGCACTCGGCCTGCAGCCTTaGCACAATCTCTGGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: FGGLGETMVVVVIAGSQALGLQP*HNLWLA Trigger: CGCCAGCCAGAGATTGTGGCAAGGCTGCAGGCCGAG...TGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR GCA 90 bp | CCTGGCAGGGCAGCTGGTCACATGAGCAAACATTCACAATACAGTGTGGTCAGTCCAGCAGGCGAAAGGTaGCCCACGCTGGCGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PGRAAGHMSKHSQYSVVSPAGER*PTLAGT Trigger: TGTACCCGCCAGCGTGGGGCACCTTTCGCCTGCTGG...ACTGACCACACTGTATTGTGAATGTTTGCTCATGTGACCAGCTGCCCTGCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | CGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATTCCAGAAACACATCTTaGAGCACACGGCCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: RGRWQKGQGCRWVAMGSNSRNTS*STRPQS Trigger: AGATTGTGGCCGTGTGCTCCAAGATGTGTTTCTGGA...ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGCGAGGGGACAGGGCTCGCCAGGAGCCATCGTGGAAGGTGGCAGAAGGGTAGTCCTTGTTGTACTTaGTGGACATCAGGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGEGTGLARSHRGRWQKGSPCCT*WTSGTS Trigger: AGAAGTTCCTGATGTCCACCAAGTACAACAAGGACT...ACCCTTCTGCCACCTTCCACGATGGCTCCTGGCGAGCCCTGTCCCCTCGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTAAAGTAAGTGAACCGTaGCTTGGGCGCTCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGQCVRGRSTEERPWPGCKVSEP*LGRSRA Trigger: GGCCCTGGAGCGCCCAAGCCACGGTTCACTTACTTT...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| 3UTR CAA 72 bp | GCTTCTAGGATTTCCACCAGCTGCTCCGCCTTCTCGTaGAACGTCTCCATCAGGCTGACCAAGGAGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ASRISTSCSAFS*NVSIRLTKELR Trigger: CCGCAGCTCCTTGGTCAGCCTGATGGAGACGTTCAACGAGAAGGCGGAGCAGCTGGTGGAAATCCTAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCCTGCTCCATCCCAAAAGCTaGCTTGGCCAGGATGTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLVSNRGLRGKVHTDPALLHPKS*LGQDVD Trigger: ATCGACATCCTGGCCAAGGCAGCTTTTGGGATGGAG...CAGGGCAGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | TGGTGGCACAGGTCAGCATGTCCTGCATGGACACGGGTGTCTGTCCATCTGCCTGCGCGCGGTACATCTTaGAGTCCTTGTTGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WWHRSACPAWTRVSVHLPARGTS*SPCCTW Trigger: CCAAGTACAACAAGGACTCCAAGATGTACCGCGCGC...AGGCAGATGGACAGACACCCGTGTCCATGCAGGACATGCTGACCTGTGCCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGTCAGACACCAAGCCCTaGCCAAACAGTCTCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCVRGRSTEERPWPGCEKSDTKP*PNSLSP Trigger: TGGGGAGAGACTGTTTGGCCAGGGCTTGGTGTCTGA...CTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTCCAGGATGTCGATGGTaGCACAGGTCAGCATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CGQCVRGRSTEERPWPGCPGCRW*HRSACP Trigger: AGGACATGCTGACCTGTGCCACCATCGACATCCTGG...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGTGGCCAGGATGTCGATaGTGGCACAGGTCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QCVRGRSTEERPWPGCEKWPGCR*WHRSAC Trigger: ACATGCTGACCTGTGCCACCATCGACATCCTGGCCA...CTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | AGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGCAAACAGGGCCTTGCCACAATCTCTaGCTGGCGAGACAACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGRSTEERPWPGCEKQTGPCHNL*LARQLH Trigger: ATGGAGTTGTCTCGCCAGCCAGAGATTGTGGCAAGG...CCCTGTTTGCTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGCAAACAGGGGACTCTTTGAGGACCTaGGACAGATACTGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGRSTEERPWPGCEKQTGDSLRT*DRYCSL Trigger: GAGACTGCAGTATCTGTCGCAGGTCCTCAAAGAGTC...CCCTGTTTGCTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | ACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCCTGCTGCTTTCTCTTCCCTaGCATGAACTTTGCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVSNRGLRGKVHTDPALLLSLP*HELCQG Trigger: ACCCTGGCAAAGTTCATGCCAGGGAAGAGAAAGCAG...CAGGGCAGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGAAGTTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGCAGCACGGGGTCCAATaGCTTGAGCGTAGCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SAEVRRFGRDDGSCGDSWQHGVQ*LERSLL Trigger: GAGCAGGCTACGCTCAAGCCATTGGACCCCGTGCTG...CCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAACTTCTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATGGGGGCCAATGAGTCTTGTAGAAGACATTaGCTCTTACAACAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGAGGWPWAVMGANESCRRH*LLQQDH Trigger: ATGGTCCTGTTGTAAGAGTCAATGTCTTCTACAAGA...CTCATTGGCCCCCATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR TCA 90 bp | TTCCAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTAGAACCTCATCGTCCTaGGCTCCCTCTTCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FQTLVSNRGLRGKVHTDPRTSSS*APSSAL Trigger: CAAAGCTGAAGAGGGAGCTCAGGACGATGAGGTTCT...AGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | GATGTCGATGGTGGCACAGGTCAGCATGTCCTGCATGGACACGGGTGTCTGTCCTCCAGAAACACATCTTaGAGCACACGGCCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: DVDGGTGQHVLHGHGCLSSRNTS*STRPQS Trigger: AGATTGTGGCCGTGTGCTCCAAGATGTGTTTCTGGA...GGACAGACACCCGTGTCCATGCAGGACATGCTGACCTGTGCCACCATCGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTTTCTCTTCCCTGGCATaGACTTTGCCAGGGTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FQTLVSNRGLRGKVHTDPFSSLA*TLPGCY Trigger: GTAACACCCTGGCAAAGTTCATGCCAGGGAAGAGAA...AGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR TCA 90 bp | TTCCAGACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTACAACTCCATCACTGTaGATGCCAGATGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQTLVSNRGLRGKVHTDPTTPSL*MPDGWQ Trigger: CTGCCAACCATCTGGCATTCACAGTGATGGAGTTGT...AGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGTCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGGTGTGGCCAGTGCAGAAGTTCGGAGGTTTGGGAGAGACGATGGTAGTGCGCGCGGTACATCTTaGAGTCCTTGTTGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEGVASAEVRRFGRDDGSARGTS*SPCCTW Trigger: CCAAGTACAACAAGGACTCCAAGATGTACCGCGCGC...ACTACCATCGTCTCTCCCAAACCTCCGAACTTCTGCACTGGCCACACCCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | GTGCAGAAGTTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGTCAGCATGTCCTGCATaGACACGGGTGTCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VQKFGGLGETMVVVVIAGSACPA*TRVSVH Trigger: ATGGACAGACACCCGTGTCCATGCAGGACATGCTGA...CCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAACTTCTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | GAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGAAAGGTGCCCCACGCTaGCGGGTACAGCCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQTFTIQCGQCVRGRSTEKGAPR*RVQPQR Trigger: TCTCTGAGGCTGTACCCGCCAGCGTGGGGCACCTTT...CTCTGTGCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR GCA 90 bp | GTGCAGAAGTTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGCTCCATCACTGTGAATaGCAGATGGTTGGCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQKFGGLGETMVVVVIAGLHHCE*QMVGRS Trigger: ACTTCTGCCAACCATCTGGCATTCACAGTGATGGAG...CCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAACTTCTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR TCA 90 bp | GAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGTCCCCAAACACAGTCTaGAGCGCGCGGTACATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQTFTIQCGQCVRGRSTESPNTV*SARYIL Trigger: CAAGATGTACCGCGCGCTTCAGACTGTGTTTGGGGA...CTCTGTGCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR GCA 90 bp | GAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGCAGGGTGTTACGGGATaGACTGATGCCCTCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EQTFTIQCGQCVRGRSTEQGVTG*TDALQH Trigger: ATGCTGGAGGGCATCAGTGCATCCCGTAACACCCTG...CTCTGTGCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR GCA 90 bp | GAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGCGGATCTCCCGAAGCTaGTTTCTCTTCCCTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: EQTFTIQCGQCVRGRSTERISRS*FLFPGM Trigger: CATGCCAGGGAAGAGAAAGCAGCTTCGGGAGATCCG...CTCTGTGCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR GCA 90 bp | AGCTGGTCACATGAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTCAGGTCAGCATGTCCTaGATGGACACGGGTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SWSHEQTFTIQCGQCVRGQVSMS*MDTGVC Trigger: ACAGACACCCGTGTCCATGCAGGACATGCTGACCTG...ACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTCATGTGACCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | AGCTGGTCACATGAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTTCCCAAAAGCTGCCTTaGCCAGGATGTCGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWSHEQTFTIQCGQCVRGSQKLP*PGCRWW Trigger: CCACCATCGACATCCTGGCCAAGGCAGCTTTTGGGA...ACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTCATGTGACCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR TCA 90 bp | ATGGACACGGGTGTCTGTCCATCTGCCTTAGCTTCTAGGATTTCCACCAGCTGCTCTTGTAGAAGACATTaGCTCTTACAACAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: MDTGVCPSALASRISTSCSCRRH*LLQQDH Trigger: ATGGTCCTGTTGTAAGAGTCAATGTCTTCTACAAGA...GCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGATGGACAGACACCCGTGTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
||
| CDS-3UTR GCA 90 bp | TCACATGAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCAGGATTTCCACCAGCTaGTCCGCCTTCTCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SHEQTFTIQCGQCVRGRSRISTS*SAFSLN Trigger: GTTCAACGAGAAGGCGGAGCAGCTGGTGGAAATCCT...GCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTCATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | TCACATGAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCAGTCCAGGTGCCTCTTaGAACCGACAACCTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SHEQTFTIQCGQCVRGRSSPGAS*NRQPHP Trigger: TGGATGAGGTTGTCGGTTCCAAGAGGCACCTGGACT...GCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTCATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAGGGCAGCTGGTCACATGAGCAAACATTCACAATACAGTGTGGTCAGTAGGGTTGAAAGTCAATaGGTCTTCAAAGTAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRAAGHMSKHSQYSVVSRVESQ*VFKVGV Trigger: GACACCTACTTTGAAGACCCATTGACTTTCAACCCT...ACTGACCACACTGTATTGTGAATGTTTGCTCATGTGACCAGCTGCCCTGCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR TCA 90 bp | TCACATGAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTAGGAGCACTTTCACCTCCATCTaGGCAAACTGTTGGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHEQTFTIQCGQCVRGRSTFTSI*ANCWPM Trigger: CATCGGCCAACAGTTTGCTCAGATGGAGGTGAAAGT...GCTCCTACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTCATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CCA 90 bp | AGCTGGTCACATGAGCAAACATTCACAATACAGTGTGGTCAGTGTGTTAGAGGTCACCCAGTAACATACTaGTCTCCATCCCAAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSHEQTFTIQCGQCVRGHPVTY*SPSQKL Trigger: CAGCTTTTGGGATGGAGACCAGTATGTTACTGGGTG...ACCTCTAACACACTGACCACACTGTATTGTGAATGTTTGCTCATGTGACCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS GCA 90 bp | GCCCGGGGATGTGCTCATAGCGGCTGCGAGCGCGATGCACGAAGGTaGAGCAGAGGCCGAAGGCGAGCAGGACGGCGCTGCCGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARGCAHSGCERDARR*SRGRRRAGRRCRAA Trigger: TGCTGCTCGGCAGCGCCGTCCTGCTCGCCTTCGGCCTCTGCTGCACCTTCGTGCATCGCGCTCGCAGCCGCTATGAGCACATCCCCGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS GCA 90 bp | GAAGGAAGCTGGGCCGCGGCGGCCCGGGGATGTGCTCATAGCGGCTaGGAGCGCGATGCACGAAGGTGCAGCAGAGGCCGAAGGCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGSWAAAARGCAHSG*ERDARRCSRGRRRA Trigger: TGCTCGCCTTCGGCCTCTGCTGCACCTTCGTGCATCGCGCTCGCAGCCGCTATGAGCACATCCCCGGGCCGCCGCGGCCCAGCTTCCTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
||
| CDS GCA 90 bp | TCAGCCGGCATGTCCTCGCCCCTCTTCAGGGCTTCGCGGCGGCGCTaGACCCAATCCTTCCCCACCTGGCGCAGCAGACGGATGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SAGMSSPLFRASRRR*TQSFPTWRSRRMLS Trigger: CGAGAGCATCCGTCTGCTGCGCCAGGTGGGGAAGGATTGGGTGCAGCGCCGCCGCGAAGCCCTGAAGAGGGGCGAGGACATGCCGGCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS CCA 90 bp | CTCTTCAGGGCTTCGCGGCGGCGCTGCACCCAATCCTTCCCCACCTaGCGCAGCAGACGGATGCTCTCGCGGATCTCCCGAAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFRASRRRCTQSFPT*RSRRMLSRISRSCF Trigger: AAAGCAGCTTCGGGAGATCCGCGAGAGCATCCGTCTGCTGCGCCAGGTGGGGAAGGATTGGGTGCAGCGCCGCCGCGAAGCCCTGAAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATGGGGGCCAATGAGGAGCGTAGCCTGCTCTaGCAGCCCAAAGCGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRGAGGWPWAVMGANEERSLL*QPKALP Trigger: GGGCAGCGCTTTGGGCTGCAAGAGCAGGCTACGCTC...CTCATTGGCCCCCATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATGGGGGCCAATGAGAGCCTCAGAGACTCTTaGAGGACCTGCGACAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: RRVRGAGGWPWAVMGANESLRDS*RTCDRY Trigger: GTATCTGTCGCAGGTCCTCAAAGAGTCTCTGAGGCT...CTCATTGGCCCCCATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CAA 90 bp | TTCGGAGGTTTGGGAGAGACGATGGTAGTTGTGGTGATAGCTGGGAGTCAGGCACCTCGGCCTGCAGCCTaGCCACAATCTCTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FGGLGETMVVVVIAGSQAPRPAA*PQSLAG Trigger: GCCAGCCAGAGATTGTGGCAAGGCTGCAGGCCGAGG...TGCCTGACTCCCAGCTATCACCACAACTACCATCGTCTCTCCCAAACCTCCGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS GCA 90 bp | CTGCTTTCTCTTCCCTGGCATGAACTTTGCCAGGGTGTTACGGGATaGACTGATGCCCTCCAGCATGACCTTCACTGCCTGGGACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLSLPWHELCQGVTG*TDALQHDLHCLGQR Trigger: CCGCTGTCCCAGGCAGTGAAGGTCATGCTGGAGGGCATCAGTGCATCCCGTAACACCCTGGCAAAGTTCATGCCAGGGAAGAGAAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS CCA 90 bp | CCTTCACTGCCTGGGACAGCGGTTTCTGGGCACCCAGTAACATACTaGTCTCCATCCCAAAAGCTGCCTTGGCCAGGATGTCGATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSLPGTAVSGHPVTY*SPSQKLPWPGCRWW Trigger: CCACCATCGACATCCTGGCCAAGGCAGCTTTTGGGATGGAGACCAGTATGTTACTGGGTGCCCAGAAACCGCTGTCCCAGGCAGTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS CCA 90 bp | CAGACGGATGCTCTCGCGGATCTCCCGAAGCTGCTTTCTCTTCCCTaGCATGAACTTTGCCAGGGTGTTACGGGATGCACTGATGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QTDALADLPKLLSLP*HELCQGVTGCTDAL Trigger: GAGGGCATCAGTGCATCCCGTAACACCCTGGCAAAGTTCATGCCAGGGAAGAGAAAGCAGCTTCGGGAGATCCGCGAGAGCATCCGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS CCA 90 bp | ACAGATACTGCAGTCTCCCCAGATCCTCGTAGTCCAGGTGCCTCTTaGAACCGACAACCTCATCCACCTCGGCCTGCAGCCTTGCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: TDTAVSPDPRSPGAS*NRQPHPPRPAALPQ Trigger: TTGTGGCAAGGCTGCAGGCCGAGGTGGATGAGGTTGTCGGTTCCAAGAGGCACCTGGACTACGAGGATCTGGGGAGACTGCAGTATCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
||
| CDS-3UTR CAA 90 bp | CGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATGAGTCCTTGTTGTACTaGGTGGACATCAGGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: RGRWQKGQGCRWVAMGSNESLLY*VDIRNF Trigger: GAAGTTCCTGATGTCCACCAAGTACAACAAGGACTC...ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | CGTGGAAGGTGGCAGAAGGGTCAGGGGTGCCGGTGGGTGGCCATGGGCAGTAATATCTTGGAGTCCTTGTaGTACTTGGTGGACATCAGG | + |
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Preference number: 5 (lower is better) Translates to: RGRWQKGQGCRWVAMGSNILESL*YLVDIR Trigger: CCTGATGTCCACCAAGTACAACAAGGACTCCAAGAT...ATTACTGCCCATGGCCACCCACCGGCACCCCTGACCCTTCTGCCACCTTCCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | ACCCTAGTGAGCAATAGGGGCCTCAGAGGCAAAGTGCACACAGACCCTGCCCTGATCCCAAAAGCTGCCTaGGCCAGGATGTCGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: TLVSNRGLRGKVHTDPALIPKAA*ARMSMV Trigger: CACCATCGACATCCTGGCCAAGGCAGCTTTTGGGAT...CAGGGCAGGGTCTGTGTGCACTTTGCCTCTGAGGCCCCTATTGCTCACTAGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 90 bp | GTGTTACGGGATGCACTGATGCCCTCCAGCATGACCTTCACTGCCTaGGACAGCGGTTTCTGGGCACCCAGTAACATACTGGTCTCCATC | + |
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Preference number: 5 (lower is better) Translates to: VLRDALMPSSMTFTA*DSGFWAPSNILVSI Trigger: GATGGAGACCAGTATGTTACTGGGTGCCCAGAAACCGCTGTCCCAGGCAGTGAAGGTCATGCTGGAGGGCATCAGTGCATCCCGTAACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGAGCGCGCGGTACATCTaGGAGTCCTTGTTGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: QCVRGRSTEERPWPGCEKSARYI*ESLLYL Trigger: CAAGTACAACAAGGACTCCAAGATGTACCGCGCGCT...CTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS TCA 90 bp | TCAGACACCAAGCCCTGGCCAAACAGTCTCTCCCCAAACACAGTCTaGAGCGCGCGGTACATCTTGGAGTCCTTGTTGTACTTGGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: SDTKPWPNSLSPNTV*SARYILESLLYLVD Trigger: GTCCACCAAGTACAACAAGGACTCCAAGATGTACCGCGCGCTTCAGACTGTGTTTGGGGAGAGACTGTTTGGCCAGGGCTTGGTGTCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | ATGGACACGGGTGTCTGTCCATCTGCCTTAGCTTCTAGGATTTCCACCAGCTGCAGCGCGCGGTACATCTaGGAGTCCTTGTTGTACTTG | + |
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Preference number: 5 (lower is better) Translates to: MDTGVCPSALASRISTSCSARYI*ESLLYL Trigger: CAAGTACAACAAGGACTCCAAGATGTACCGCGCGCT...GCAGCTGGTGGAAATCCTAGAAGCTAAGGCAGATGGACAGACACCCGTGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS-3UTR CAA 90 bp | CAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTGAGAAGAAGAAGGTGACAAAGTaGTCCAGCAGAACCTCATCG | + |
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Preference number: 5 (lower is better) Translates to: QCVRGRSTEERPWPGCEKKKVTK*SSRTSS Trigger: CGATGAGGTTCTGCTGGACAACTTTGTCACCTTCTT...CTTCTCACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCAGGGCAGCTGGTCACATGAGCAAACATTCACAATACAGTGTGGTCAGTAACAGGAGAGGAGTATaGCCAGGGACTCTGACCCCA | + |
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Preference number: 5 (lower is better) Translates to: PGRAAGHMSKHSQYSVVSNRRGV*PGTLTP Trigger: TGGGGTCAGAGTCCCTGGCAATACTCCTCTCCTGTT...ACTGACCACACTGTATTGTGAATGTTTGCTCATGTGACCAGCTGCCCTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS TCA 90 bp | GCAATGAAGAAGGTGACAAAGTTGTCCAGCAGAACCTCATCGTCCTaGGCTCCCTCTTCAGCTTTGAGGATCTGCGTGAGGATGTCAGCC | + |
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Preference number: 5 (lower is better) Translates to: AMKKVTKLSSRTSSS*APSSALRICVRMSA Trigger: GGCTGACATCCTCACGCAGATCCTCAAAGCTGAAGAGGGAGCTCAGGACGATGAGGTTCTGCTGGACAACTTTGTCACCTTCTTCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS GCA 90 bp | CCTTGCCACAATCTCTGGCTGGCGAGACAACTCCATCACTGTGAATaGCAGATGGTTGGCAGAAGTCTCATGACCCGCAATGAAGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: PCHNLWLARQLHHCE*QMVGRSLMTRNEEG Trigger: ACCTTCTTCATTGCGGGTCATGAGACTTCTGCCAACCATCTGGCATTCACAGTGATGGAGTTGTCTCGCCAGCCAGAGATTGTGGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | AACAGTCTGCAAGAGACAGAAACCGGGTGCCAGAGAGAAGGTGGGAAGCAGGAGATCTTGGAGTCCTTGTaGTACTTGGTGGACATCAGG | + |
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Preference number: 5 (lower is better) Translates to: NSLQETETGCQREGGKQEILESL*YLVDIR Trigger: CCTGATGTCCACCAAGTACAACAAGGACTCCAAGAT...CTCCTGCTTCCCACCTTCTCTCTGGCACCCGGTTTCTGTCTCTTGCAGACTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS-3UTR CAA 90 bp | TGTGGTCAGTGTGTTAGAGGTAGGAGCACAGAGGAGAGACCCTGGCCTGGCTGTTACATCTTGGAGTCCTaGTTGTACTTGGTGGACATC | + |
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Preference number: 5 (lower is better) Translates to: CGQCVRGRSTEERPWPGCYILES*LYLVDI Trigger: GATGTCCACCAAGTACAACAAGGACTCCAAGATGTA...ACAGCCAGGCCAGGGTCTCTCCTCTGTGCTCCTACCTCTAACACACTGACCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS-3UTR CAA 90 bp | TCAGGGTTGAAGAAAGGCTCTGGGACTCAGTGGTGTGATATTGCCAGATGTAGCGAGTCCTTGTTGTACTaGGTGGACATCAGGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: SGLKKGSGTQWCDIARCSESLLY*VDIRNF Trigger: GAAGTTCCTGATGTCCACCAAGTACAACAAGGACTC...GCTACATCTGGCAATATCACACCACTGAGTCCCAGAGCCTTTCTTCAACCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221708.2 |
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| CDS GCA 72 bp | TGGGCCGCGGCGGCCCGGGGATGTGCTCATAGCGGCTaGGAGCGCGATGCACGAAGGTGCAGCAGAGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: WAAAARGCAHSG*ERDARRCSRGR Trigger: TCGGCCTCTGCTGCACCTTCGTGCATCGCGCTCGCAGCCGCTATGAGCACATCCCCGGGCCGCCGCGGCCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
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| CDS GCA 72 bp | ATGTCCTCGCCCCTCTTCAGGGCTTCGCGGCGGCGCTaGACCCAATCCTTCCCCACCTGGCGCAGCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: MSSPLFRASRRR*TQSFPTWRSRR Trigger: CCGTCTGCTGCGCCAGGTGGGGAAGGATTGGGTGCAGCGCCGCCGCGAAGCCCTGAAGAGGGGCGAGGACAT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | GCTTCGCGGCGGCGCTGCACCCAATCCTTCCCCACCTaGCGCAGCAGACGGATGCTCTCGCGGATCTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: ASRRRCTQSFPT*RSRRMLSRISR Trigger: TCGGGAGATCCGCGAGAGCATCCGTCTGCTGCGCCAGGTGGGGAAGGATTGGGTGCAGCGCCGCCGCGAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS GCA 72 bp | TGTGCTCATAGCGGCTGCGAGCGCGATGCACGAAGGTaGAGCAGAGGCCGAAGGCGAGCAGGACGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CAHSGCERDARR*SRGRRRAGRRC Trigger: GCAGCGCCGTCCTGCTCGCCTTCGGCCTCTGCTGCACCTTCGTGCATCGCGCTCGCAGCCGCTATGAGCACA 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
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| CDS CCA 72 bp | GGTCTCCTCCTCCAGCAGGCGAAAGGTGCCCCACGCTaGCGGGTACAGCCTCAGAGACTCTTTGAGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: GLLLQQAKGAPR*RVQPQRLFEDL Trigger: CAGGTCCTCAAAGAGTCTCTGAGGCTGTACCCGCCAGCGTGGGGCACCTTTCGCCTGCTGGAGGAGGAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | GCAGTCTCCCCAGATCCTCGTAGTCCAGGTGCCTCTTaGAACCGACAACCTCATCCACCTCGGCCTGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: AVSPDPRSPGAS*NRQPHPPRPAA Trigger: GGCTGCAGGCCGAGGTGGATGAGGTTGTCGGTTCCAAGAGGCACCTGGACTACGAGGATCTGGGGAGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | TCCACCTCGGCCTGCAGCCTTGCCACAATCTCTGGCTaGCGAGACAACTCCATCACTGTGAATGCCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: STSACSLATISG*RDNSITVNARW Trigger: CCATCTGGCATTCACAGTGATGGAGTTGTCTCGCCAGCCAGAGATTGTGGCAAGGCTGCAGGCCGAGGTGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | CTCATCCACCTCGGCCTGCAGCCTTGCCACAATCTCTaGCTGGCGAGACAACTCCATCACTGTGAATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LIHLGLQPCHNL*LARQLHHCECQ Trigger: CTGGCATTCACAGTGATGGAGTTGTCTCGCCAGCCAGAGATTGTGGCAAGGCTGCAGGCCGAGGTGGATGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS GCA 72 bp | CTTCCCTGGCATGAACTTTGCCAGGGTGTTACGGGATaGACTGATGCCCTCCAGCATGACCTTCACTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LPWHELCQGVTG*TDALQHDLHCL Trigger: CAGGCAGTGAAGGTCATGCTGGAGGGCATCAGTGCATCCCGTAACACCCTGGCAAAGTTCATGCCAGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | CCTGGGACAGCGGTTTCTGGGCACCCAGTAACATACTaGTCTCCATCCCAAAAGCTGCCTTGGCCAGGATGT | + |
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Preference number: 6 (lower is better) Translates to: PGTAVSGHPVTY*SPSQKLPWPGC Trigger: ACATCCTGGCCAAGGCAGCTTTTGGGATGGAGACCAGTATGTTACTGGGTGCCCAGAAACCGCTGTCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | GATGCACTGATGCCCTCCAGCATGACCTTCACTGCCTaGGACAGCGGTTTCTGGGCACCCAGTAACATACTG | + |
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Preference number: 6 (lower is better) Translates to: DALMPSSMTFTA*DSGFWAPSNIL Trigger: CAGTATGTTACTGGGTGCCCAGAAACCGCTGTCCCAGGCAGTGAAGGTCATGCTGGAGGGCATCAGTGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | GCTCTCGCGGATCTCCCGAAGCTGCTTTCTCTTCCCTaGCATGAACTTTGCCAGGGTGTTACGGGATGCACT | + |
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Preference number: 6 (lower is better) Translates to: ALADLPKLLSLP*HELCQGVTGCT Trigger: AGTGCATCCCGTAACACCCTGGCAAAGTTCATGCCAGGGAAGAGAAAGCAGCTTCGGGAGATCCGCGAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS TCA 72 bp | AAGCCCTGGCCAAACAGTCTCTCCCCAAACACAGTCTaGAGCGCGCGGTACATCTTGGAGTCCTTGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: KPWPNSLSPNTV*SARYILESLLY Trigger: GTACAACAAGGACTCCAAGATGTACCGCGCGCTTCAGACTGTGTTTGGGGAGAGACTGTTTGGCCAGGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS TCA 72 bp | CCACAATCTCTGGCTGGCGAGACAACTCCATCACTGTaGATGCCAGATGGTTGGCAGAAGTCTCATGACCCG | + |
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Preference number: 6 (lower is better) Translates to: PQSLAGETTPSL*MPDGWQKSHDP Trigger: CGGGTCATGAGACTTCTGCCAACCATCTGGCATTCACAGTGATGGAGTTGTCTCGCCAGCCAGAGATTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS TCA 72 bp | AAGGTGACAAAGTTGTCCAGCAGAACCTCATCGTCCTaGGCTCCCTCTTCAGCTTTGAGGATCTGCGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KVTKLSSRTSSS*APSSALRICVR Trigger: CCTCACGCAGATCCTCAAAGCTGAAGAGGGAGCTCAGGACGATGAGGTTCTGCTGGACAACTTTGTCACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS GCA 72 bp | AATCTCTGGCTGGCGAGACAACTCCATCACTGTGAATaGCAGATGGTTGGCAGAAGTCTCATGACCCGCAAT | + |
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Preference number: 6 (lower is better) Translates to: NLWLARQLHHCE*QMVGRSLMTRN Trigger: ATTGCGGGTCATGAGACTTCTGCCAACCATCTGGCATTCACAGTGATGGAGTTGTCTCGCCAGCCAGAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021684.6 |
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| CDS CCA 72 bp | TCTCCCCAAACACAGTCTGAAGCGCGCGGTACATCTTaGAGTCCTTGTTGTACTTGGTGGACATCAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: SPQTQSEARGTS*SPCCTWWTSGT Trigger: AGTTCCTGATGTCCACCAAGTACAACAAGGACTCCAAGATGTACCGCGCGCTTCAGACTGTGTTTGGGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
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| CDS CCA 72 bp | GGACCATACTTCTTAGCCCAATCCAGAAACACATCTTaGAGCACACGGCCACAATCTTCGTCCTTTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: GPYFLAQSRNTS*STRPQSSSFFQ Trigger: TTGGAAAAAGGACGAAGATTGTGGCCGTGTGCTCCAAGATGTGTTTCTGGATTGGGCTAAGAAGTATGGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
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| CDS CAA 72 bp | AGGACCATACTTCTTAGCCCAATCCAGAAACACATCTaGGAGCACACGGCCACAATCTTCGTCCTTTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: RTILLSPIQKHI*EHTATIFVLFP Trigger: TGGAAAAAGGACGAAGATTGTGGCCGTGTGCTCCAAGATGTGTTTCTGGATTGGGCTAAGAAGTATGGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
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| CDS CAA 90 bp | TCTTACAACAGGACCATACTTCTTAGCCCAATCCAGAAACACATCTaGGAGCACACGGCCACAATCTTCGTCCTTTTTCCAAAAGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: SYNRTILLSPIQKHI*EHTATIFVLFPKVG Trigger: CCCTACTTTTGGAAAAAGGACGAAGATTGTGGCCGTGTGCTCCAAGATGTGTTTCTGGATTGGGCTAAGAAGTATGGTCCTGTTGTAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021684.6 ENSMUST00000221708.2 |
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