Pregenerated sensors for CYP3A59 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061292Ensembl transcript IDs: ENSMUST00000035571.10, ENSMUST00000199212.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGGACAGTGAAGTTCTGCGAATTCTTGAGGCTCTaGCCAGTACTCAGGGTTTCG | + |
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Preference number: 2 (lower is better) Translates to: LIFRGICVSSQGWTVKFCEFLRL*PVLRVS Trigger: CGAAACCCTGAGTACTGGCCAGAGCCTCAAGAATTC...GCAGAACTTCACTGTCCAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR CCA 90 bp | GAAAACTGGTTCCCTGCTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGTGTCTAGGCAGTTCCTaGGTCCATTTCCAAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ENWFPADLQGDLCLFTRLCLGSS*VHFQRA Trigger: TGCCCTTTGGAAATGGACCCAGGAACTGCCTAGACA...CAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAGCAGGGAACCAGTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | CATGTCCATCAGGGCATCATAGGTGACAGGTGCCTTGTTGGGCAGAGTTCTGTCGAATCACAAAACAGATaGTACACTGCAGAGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: HVHQGIIGDRCLVGQSSVESQNR*YTAEPL Trigger: CAGTGGCTCTGCAGTGTATCATCTGTTTTGTGATTC...GACAGAACTCTGCCCAACAAGGCACCTGTCACCTATGATGCCCTGATGGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR CCA 90 bp | CTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGGACAGTGAAGTTCTGCTCAGAAAGAGCTTTCTaGGACTCTTGGCCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LIFRGICVSSQGWTVKFCSERAF*DSWPLE Trigger: CTCCAAAGGCCAAGAGTCCCAGAAAGCTCTTTCTGA...GCAGAACTTCACTGTCCAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | CTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGGACAGTGAAGTTCTGCCCAGTTCATACATTATaGGGGAAATGGAAGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LIFRGICVSSQGWTVKFCPVHTL*GKWKCL Trigger: CAAGCACTTCCATTTCCCTCATAATGTATGAACTGG...GCAGAACTTCACTGTCCAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR GCA 90 bp | TATATATATGGATCAATGTTGCCCTCGTTCTCCTTGCTGAACCTTCCAGGGCAGATCTTCTTGGTTTTCTaGACAAAGGGATTCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: YIYGSMLPSFSLLNLPGQIFLVF*TKGFCG Trigger: TCCACAGAATCCCTTTGTGCAGAAAACCAAGAAGAT...CTGCCCTGGAAGGTTCAGCAAGGAGAACGAGGGCAACATTGATCCATATATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | ATAAAAATAACAGCTTGTGCTGCCATTTCTAGATCAGAAAGAGCTTTCTGGGACACACTGCAGAGCCACTaGGCATGTTCAGTGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: IKITACAAISRSERAFWDTLQSH*ACSVNF Trigger: GAAATTCACTGAACATGCTCAGTGGCTCTGCAGTGT...GTCCCAGAAAGCTCTTTCTGATCTAGAAATGGCAGCACAAGCTGTTATTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGACACTGCAGAGCCACTaGGCATGTTCAGTGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWTLQSH*ACSVNF Trigger: GAAATTCACTGAACATGCTCAGTGGCTCTGCAGTGT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGAATCACAAAACAGATaGTACACTGCAGAGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWESQNR*YTAEPL Trigger: CAGTGGCTCTGCAGTGTATCATCTGTTTTGTGATTC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGATTCTGTGGATTATTaGGGGAATCGATGTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWDSVDY*GNRCSL Trigger: GAGTGAACATCGATTCCCTCAATAATCCACAGAATC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGACGAGAATCAGAAGATaGACATCCACAACTACCATT | + |
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Preference number: 2 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWTRIRR*TSTTTI Trigger: AATGGTAGTTGTGGATGTTCATCTTCTGATTCTCGT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| 3UTR GCA 72 bp | GTACTCCATGTCCATCAGGGCATCATAGGTGACAGGTaGCTTGTTGGGCAGAGTTCTGTCAATCTCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: VLHVHQGIIGDR*LVGQSSVNLIL Trigger: CAGGATGAGATTGACAGAACTCTGCCCAACAAGGCACCTGTCACCTATGATGCCCTGATGGACATGGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR CAA 90 bp | GAAAACTGGTTCCCTGCTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGCTCGGTTCTTCTGTTTaGAAGCAAGGCGTTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ENWFPADLQGDLCLFTRLLGSSV*KQGVLS Trigger: AGAAAGAACGCCTTGCTTCAAAACAGAAGAACCGAG...CAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAGCAGGGAACCAGTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR CCA 72 bp | GTTCCTGGGTCCATTTCCAAAGGGCATGTATATATATaGATCAATGTTGCCCTCGTTCTCCTTGCTGAACCT | + |
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Preference number: 3 (lower is better) Translates to: VPGSISKGHVYI*INVALVLLAEP Trigger: AGGTTCAGCAAGGAGAACGAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATGGACCCAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR CCA 72 bp | GTGTTCTGTGACACAGTCTCCTTGAAGAATATAACATaGTTTCTGAGGGAAATTCATGATGCAGTTCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: VFCDTVSLKNIT*FLREIHDAVLG Trigger: ACCCAGAACTGCATCATGAATTTCCCTCAGAAACCATGTTATATTCTTCAAGGAGACTGTGTCACAGAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR CAA 90 bp | CATTTCCAAAGGGCATGTATATATATGGATCAATGTTGCCCTCGTTCTCCTTGCTGTGACACAGTCTCCTaGAAGAATATAACATGGTTT | + |
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Preference number: 3 (lower is better) Translates to: HFQRACIYMDQCCPRSPCCDTVS*KNITWF Trigger: AAACCATGTTATATTCTTCAAGGAGACTGTGTCACA...GCAAGGAGAACGAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| 3UTR-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGTGTGACACAGTCTCCTaGAAGAATATAACATGGTTT | + |
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Preference number: 3 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWCDTVS*KNITWF Trigger: AAACCATGTTATATTCTTCAAGGAGACTGTGTCACA...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| 3UTR TCA 72 bp | GTTGTTCTAAGGTTAATTAAATTCTCTGGTGTTCTGTaGCACAGTCTCCTTGAAGAATATAACATGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VVLRLIKFSGVL*HSLLEEYNMVS Trigger: AGAAACCATGTTATATTCTTCAAGGAGACTGTGTCACAGAACACCAGAGAATTTAATTAACCTTAGAACAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| 3UTR CAA 72 bp | CTCGTTCTCCTTGCTGAACCTTCCAGGGCAGAATTCTaGAGGCTCTGGCCAGTACTCAGGGTTTCGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LVLLAEPSRAEF*RLWPVLRVSVK Trigger: CTTCACCGAAACCCTGAGTACTGGCCAGAGCCTCAAGAATTCTGCCCTGGAAGGTTCAGCAAGGAGAACGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| CDS-3UTR GCA 90 bp | CTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGGACAGTGAAGTTCTGCTATAAGCTCCAAAGATaGTCCTTGAGTTTGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LIFRGICVSSQGWTVKFCYKLQR*SLSLPL Trigger: CAGTGGCAAACTCAAGGAGCATCTTTGGAGCTTATA...GCAGAACTTCACTGTCCAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| CDS-3UTR TCA 90 bp | CATTTCCAAAGGGCATGTATATATATGGATCAATGTTGCCCTCGTTCTCCTTGCGAGTCGGACGGTTTGTaGAGACTGAGTAACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: HFQRACIYMDQCCPRSPCESDGL*RLSNIL Trigger: AAGAATGTTACTCAGTCTTCACAAACCGTCCGACTC...GCAAGGAGAACGAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| CDS-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGCCAGGGCAGAATTCTTaGGGCTCTGGCCAGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWPGQNS*GSGQYS Trigger: TGAGTACTGGCCAGAGCCTCAAGAATTCTGCCCTGG...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAAACTGGTTCCCTGCTaGTCTTCAGGGGGATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWKLVPC*SSGGSV Trigger: CACAGATCCCCCTGAAGATCAGCAGGGAACCAGTTT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGAATTCTTGAGGCTCTaGCCAGTACTCAGGGTTTCG | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWEFLRL*PVLRVS Trigger: CGAAACCCTGAGTACTGGCCAGAGCCTCAAGAATTC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGTGTCTAGGCAGTTCCTaGGTCCATTTCCAAAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWCLGSS*VHFQRA Trigger: TGCCCTTTGGAAATGGACCCAGGAACTGCCTAGACA...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR TCA 90 bp | CATTTCCAAAGGGCATGTATATATATGGATCAATGTTGCCCTCGTTCTCCTTGCTGCCATCAAAGTAGTTaGAAATGGTGCCAAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: HFQRACIYMDQCCPRSPCCHQSS*KWCQIK Trigger: CTTTATTTGGCACCATTTTCAACTACTTTGATGGCA...GCAAGGAGAACGAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| CDS-3UTR CCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGTCAGAAAGAGCTTTCTaGGACTCTTGGCCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWSERAF*DSWPLE Trigger: CTCCAAAGGCCAAGAGTCCCAGAAAGCTCTTTCTGA...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGAGTCGGACGGTTTGTaGAGACTGAGTAACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWESDGL*RLSNIL Trigger: AAGAATGTTACTCAGTCTTCACAAACCGTCCGACTC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| CDS-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAGATGTCTTTCATGTTaGTGGGCTCCCCTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWRCLSC*WAPLSL Trigger: AAGAGAAAGGGGAGCCCATCAACATGAAAGACATCT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGATGGGTTTTTCTGGTTaGAAAACTGGTTCCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWMGFSG*KTGSLL Trigger: CAGCAGGGAACCAGTTTTCCAACCAGAAAAACCCAT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGATGATGGGTTTTTCTaGTTGGAAAACTGGTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWDDGFF*LENWFP Trigger: AGGGAACCAGTTTTCCAACCAGAAAAACCCATCATC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR GCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGATCTTCTTGGTTTTCTaGACAAAGGGATTCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWIFLVF*TKGFCG Trigger: TCCACAGAATCCCTTTGTGCAGAAAACCAAGAAGAT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGGGCATGTATATATATaGATCAATGTTGCCCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWGHVYI*INVALV Trigger: AACGAGGGCAACATTGATCCATATATATACATGCCC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR TCA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGTGCCATCAAAGTAGTTaGAAATGGTGCCAAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWCHQSS*KWCQIK Trigger: CTTTATTTGGCACCATTTTCAACTACTTTGATGGCA...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGTCCAGGGCAGAATTCTaGAGGCTCTGGCCAGTACTC | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWSRAEF*RLWPVL Trigger: GAGTACTGGCCAGAGCCTCAAGAATTCTGCCCTGGA...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGTGACAGGTGCCTTGTaGGGCAGAGTTCTGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWVTGAL*GRVLSI Trigger: GATTGACAGAACTCTGCCCAACAAGGCACCTGTCAC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAGCTTTCTGGGACTCTaGGCCTTTGGAGTTCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWSFLGL*AFGVLS Trigger: ACTCAGAACTCCAAAGGCCAAGAGTCCCAGAAAGCT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGATGACTACGGTCCCTTaGGGAATGAACACTCCATTG | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWMTTVP*GMNTPL Trigger: CAATGGAGTGTTCATTCCCAAAGGGACCGTAGTCAT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGGATGGGTTTTTCTGGTaGGAAAACTGGTTCCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWDGFFW*ENWFPA Trigger: AGCAGGGAACCAGTTTTCCAACCAGAAAAACCCATC...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | ATAAAAATAACAGCTTGTGCTGCCATTTCTAGATCAGAAAGAGCTTTCTGGGACATAAAGGTAGAGGTTTaGGTCCAGGAATTCCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: IKITACAAISRSERAFWDIKVEV*VQEFLV Trigger: AACTAGGAATTCCTGGACCAAAACCTCTACCTTTAT...GTCCCAGAAAGCTCTTTCTGATCTAGAAATGGCAGCACAAGCTGTTATTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199212.5 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAAGATGTCTTTCATGTaGATGGGCTCCCCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWKMSFM*MGSPFS Trigger: AGAGAAAGGGGAGCCCATCAACATGAAAGACATCTT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGCTCGGTTCTTCTGTTTaGAAGCAAGGCGTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWLGSSV*KQGVLS Trigger: AGAAAGAACGCCTTGCTTCAAAACAGAAGAACCGAG...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035571.10 |
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| CDS-3UTR CAA 90 bp | AACTATAGAAAATTGTTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGATAAAGGTAGAGGTTTaGGTCCAGGAATTCCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: NYRKLLLQLEFRMDGTNWIKVEV*VQEFLV Trigger: AACTAGGAATTCCTGGACCAAAACCTCTACCTTTAT...CCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAACAATTTTCTATAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| CDS TCA 90 bp | TTTTATAGCAATCTTCATCAAATTTCCACATGCCATCAAAGTAGTTaGAAATGGTGCCAAATAAAGGTAGAGGTTTTGGTCCAGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: FYSNLHQISTCHQSS*KWCQIKVEVLVQEF Trigger: GAATTCCTGGACCAAAACCTCTACCTTTATTTGGCACCATTTTCAACTACTTTGATGGCATGTGGAAATTTGATGAAGATTGCTATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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| CDS TCA 72 bp | AATCTTCATCAAATTTCCACATGCCATCAAAGTAGTTaGAAATGGTGCCAAATAAAGGTAGAGGTTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: NLHQISTCHQSS*KWCQIKVEVLV Trigger: GACCAAAACCTCTACCTTTATTTGGCACCATTTTCAACTACTTTGATGGCATGTGGAAATTTGATGAAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035571.10 ENSMUST00000199212.5 |
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