Pregenerated sensors for CYP3A57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070419Ensembl transcript IDs: ENSMUST00000079268.9, ENSMUST00000174696.8
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTATGCAGTTCCTGGGTCCATTCCCAAAGGGCATGTATATATATaGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: AYAVPGSIPKGHVYI*INVALVLLAEPFRA Trigger: TGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATATATACATGCCCTTTGGGAATGGACCCAGGAACTGCATAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR TCA 90 bp | TCTAGATCAGAAAGAGCTTTCAGGGACTCTTGGCCTTTGGAGTTCTaGGTATTCATCATCAGTTGTAGAAAATCTACTCGGTTCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SRSERAFRDSWPLEF*VFIISCRKSTRFFW Trigger: CCAGAAGAACCGAGTAGATTTTCTACAACTGATGATGAATACTCAGAACTCCAAAGGCCAAGAGTCCCTGAAAGCTCTTTCTGATCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR CCA 90 bp | CTGCCATTTCTAGATCAGAAAGAGCTTTCAGGGACTCTTGGCCTTTaGAGTTCTGAGTATTCATCATCAGTTGTAGAAAATCTACTCGGT | + |
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Preference number: 1 (lower is better) Translates to: LPFLDQKELSGTLGL*SSEYSSSVVENLLG Trigger: ACCGAGTAGATTTTCTACAACTGATGATGAATACTCAGAACTCCAAAGGCCAAGAGTCCCTGAAAGCTCTTTCTGATCTAGAAATGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTTTTCTGGTCGGAAAATTGGTTGCCTGCTGATCTTCACAGGGATCTGTGTTGGACAGTGAAGTTCTaGAAGACTCCTGTGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: GFFWSENWLPADLHRDLCWTVKF*KTPVTA Trigger: TGCTGTCACAGGAGTCTTGCAGAACTTCACTGTCCA...ACACAGATCCCTGTGAAGATCAGCAGGCAACCAATTTTCCGACCAGAAAAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR-3UTR GCA 90 bp | GGCATCATAGGTGACAGGTGCCTTATTGGGCAAAGCTCTGTCAATCTCATCCTGATCTTCTTGATTTTCTaGACAAAGGGATCCTGTGGA | + |
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Preference number: 2 (lower is better) Translates to: GIIGDRCLIGQSSVNLILIFLIF*TKGSCG Trigger: TCCACAGGATCCCTTTGTGCAGAAAATCAAGAAGAT...CAGGATGAGATTGACAGAGCTTTGCCCAATAAGGCACCTGTCACCTATGATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR-3UTR CCA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAAGGGGACTCTTGGCCTTTaGAGTTCTGAGTATTCATCA | + |
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Preference number: 2 (lower is better) Translates to: IYGSMLPLFSLLNLSGQKGTLGL*SSEYSS Trigger: TGATGAATACTCAGAACTCCAAAGGCCAAGAGTCCC...CTTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR-3UTR TCA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAAGTGGCCTTTGGAGTTCTaGGTATTCATCATCAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: IYGSMLPLFSLLNLSGQKWPLEF*VFIISC Trigger: ACAACTGATGATGAATACTCAGAACTCCAAAGGCCA...CTTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGATACTGCAGAGACACTaGGCATGTTCAATGAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWILQRH*ACSMSF Trigger: GAAACTCATTGAACATGCTCAGTGTCTCTGCAGTAT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGAAGGAAAGAGGATTATaGCCATATTATGTTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWKERGL*PYYVGL Trigger: AAGACCAACATAATATGGGCATAATCCTCTTTCCTT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| 3UTR-3UTR CAA 90 bp | GGGTTTTTCTGGTCGGAAAATTGGTTGCCTGCTGATCTTCACAGGGATCTGTGTAGGAAATGGAGGTGCTaGTGCCATCATAGCCCCCGA | + |
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Preference number: 3 (lower is better) Translates to: GFFWSENWLPADLHRDLCRKWRC*CHHSPR Trigger: TCGGGGGCTATGATGGCACAAGCACCTCCATTTCCT...ACACAGATCCCTGTGAAGATCAGCAGGCAACCAATTTTCCGACCAGAAAAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR GCA 72 bp | GTACTCCATGTCCATCAGGGCATCATAGGTGACAGGTaGCTTATTGGGCAAAGCTCTGTCAATCTCATCCTG | + |
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Preference number: 3 (lower is better) Translates to: VLHVHQGIIGDR*LIGQSSVNLIL Trigger: CAGGATGAGATTGACAGAGCTTTGCCCAATAAGGCACCTGTCACCTATGATGCCCTGATGGACATGGAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR CCA 72 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTaGAATAAGTGTAGATGGTCCCACGAGAATCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: LLQLEFRMDGTN*NKCRWSHENQK Trigger: CTTCTGATTCTCGTGGGACCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| 3UTR TCA 72 bp | GGAATAAGTGTAGATGGTCCCACGAGAATCAGAAGATaGATCTCCACGTCTAACATTGAGTCAATAATTTCC | + |
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Preference number: 3 (lower is better) Translates to: GISVDGPTRIRR*ISTSNIESIIS Trigger: GGAAATTATTGACTCAATGTTAGACGTGGAGATTCATCTTCTGATTCTCGTGGGACCATCTACACTTATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| 3UTR-3UTR CAA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGTGTGACACAAGCCCCTaGAAGAATATAACATGGTTT | + |
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Preference number: 3 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWCDTSP*KNITWF Trigger: AAACCATGTTATATTCTTCAAGGGGCTTGTGTCACA...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| 3UTR TCA 72 bp | CTTGTTCTAAGGTTAATTAAATTCTCTGGTGTTCTGTaGCACAAGCCCCTTGAAGAATATAACATGGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: LVLRLIKFSGVL*HKPLEEYNMVS Trigger: AGAAACCATGTTATATTCTTCAAGGGGCTTGTGTCACAGAACACCAGAGAATTTAATTAACCTTAGAACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | GGCATCATAGGTGACAGGTGCCTTATTGGGCAAAGCTCTGTCAATCTCATCCTGAAGGCCGACGGTTTGTaGAGACTGAGTAACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: GIIGDRCLIGQSSVNLILKADGL*RLSNIL Trigger: AAGAATGTTACTCAGTCTTCACAAACCGTCGGCCTT...CAGGATGAGATTGACAGAGCTTTGCCCAATAAGGCACCTGTCACCTATGATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| CDS-3UTR CCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGGAAGTCTTCAGGCTCTaGCCAGTACTCGGGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWEVFRL*PVLGVP Trigger: CGGGACCCCGAGTACTGGCCAGAGCCTGAAGACTTC...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CCA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAAGGCTACTGGTGAAGGTTaGAGACAGGAGTGTTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: IYGSMLPLFSLLNLSGQKATGEG*RQECSK Trigger: CTTCGAACACTCCTGTCTCCAACCTTCACCAGTAGC...CTTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| 3UTR CAA 72 bp | CCAAAGGGCATGTATATATATGGATCAATGTTGCCCTaGTTCTCCTTGCTGAACCTTTCAGGGCAGAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: PKGMYIYGSMLP*FSLLNLSGQKS Trigger: AGACTTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATATATACATGCCCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| CDS-3UTR GCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGGGTCGGAAAATTGGTTaGCTGCTGATCTTCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWGRKIG*LLIFTG Trigger: CCCTGTGAAGATCAGCAGGCAACCAATTTTCCGACC...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGGCTACTGGTGAAGGTTaGAGACAGGAGTGTTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWATGEG*RQECSK Trigger: CTTCGAACACTCCTGTCTCCAACCTTCACCAGTAGC...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGAAATTGGTTGCCTGCTaGTCTTCACAGGGATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWKLVAC*SSQGSV Trigger: CACAGATCCCTGTGAAGATCAGCAGGCAACCAATTT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR GCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGTGGACAGTGAAGTTCTaGAAGACTCCTGTGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWWTVKF*KTPVTA Trigger: TGCTGTCACAGGAGTCTTGCAGAACTTCACTGTCCA...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGAAGGCCGACGGTTTGTaGAGACTGAGTAACATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWKADGL*RLSNIL Trigger: AAGAATGTTACTCAGTCTTCACAAACCGTCGGCCTT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGGGGACTCTTGGCCTTTaGAGTTCTGAGTATTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWGTLGL*SSEYSS Trigger: TGATGAATACTCAGAACTCCAAAGGCCAAGAGTCCC...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGCCAGTTCATACATTATaGAGGAAATGGAGGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWPVHTL*RKWRCL Trigger: CAAGCACCTCCATTTCCTTCATAATGTATGAACTGG...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGACACAAACTTTAGGATaGTGGGTTTTTCTGGTCGGA | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWTQTLG*WVFLVG Trigger: TCCGACCAGAAAAACCCATCATCCTAAAGTTTGTGT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGAGATATCTTTCATGTTaGTGGGCTCCTCTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWRYLSC*WAPLSL Trigger: AAGAGAAAGAGGAGCCCATCAACATGAAAGATATCT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR TCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGCTGTCAATCTCATCCTaGAGTTTCTTTTGCACATCA | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWLSISS*SFFCTS Trigger: TGATGTGCAAAAGAAACTTCAGGATGAGATTGACAG...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR GCA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGATCTTCTTGATTTTCTaGACAAAGGGATCCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWIFLIF*TKGSCG Trigger: TCCACAGGATCCCTTTGTGCAGAAAATCAAGAAGAT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CAA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAAGCAGCAGCACCCAGGTTaGTATAGAAAGGTTGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: IYGSMLPLFSLLNLSGQKQQHPG*YRKVGD Trigger: ATCCCCAACCTTTCTATACAAACCTGGGTGCTGCTG...CTTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| CDS-3UTR CAA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGAGGAAATGGAGGTGCTaGTGCCATCATAGCCCCCGA | + |
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Preference number: 5 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWRKWRC*CHHSPR Trigger: TCGGGGGCTATGATGGCACAAGCACCTCCATTTCCT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CAA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGCAGCAGCACCCAGGTTaGTATAGAAAGGTTGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWQQHPG*YRKVGD Trigger: ATCCCCAACCTTTCTATACAAACCTGGGTGCTGCTG...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CAA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGGTGACAGGTGCCTTATaGGGCAAAGCTCTGTCAATC | + |
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Preference number: 5 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWVTGAL*GKALSI Trigger: GATTGACAGAGCTTTGCCCAATAAGGCACCTGTCAC...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CAA 90 bp | CTTCTTGATTTTCTGCACAAAGGGATCCTGTGGATTATTGAGGGAATCGATGTTTTCACCAGCACAATTTaGATGATCTCTGGATCCATG | + |
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Preference number: 5 (lower is better) Translates to: LLDFLHKGILWIIEGIDVFTSTI*MISGSM Trigger: CATGGATCCAGAGATCATCAAAATTGTGCTGGTGAA...AACATCGATTCCCTCAATAATCCACAGGATCCCTTTGTGCAGAAAATCAAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174696.8 |
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| CDS-3UTR CAA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGTTCACCAGCACAATTTaGATGATCTCTGGATCCATG | + |
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Preference number: 5 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWFTSTI*MISGSM Trigger: CATGGATCCAGAGATCATCAAAATTGTGCTGGTGAA...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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| CDS-3UTR CAA 90 bp | TTGCTGCAGTTAGAATTCAGAATGGATGGAACTAACTGGAATAAGTGTAGATGGATATATGGATCAATGTaGCCCTTGTTCTCCTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LLQLEFRMDGTNWNKCRWIYGSM*PLFSLL Trigger: CAGCAAGGAGAACAAGGGCAACATTGATCCATATAT...CCATCTACACTTATTCCAGTTAGTTCCATCCATTCTGAATTCTAACTGCAGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079268.9 |
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