Pregenerated sensors for CYP3A25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029630Ensembl transcript IDs: ENSMUST00000068317.13, ENSMUST00000138870.2, ENSMUST00000145062.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTATGCAGTTCCTGGGTCCATTTCCAAAGGGCATGTATATATATaGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: AYAVPGSISKGHVYI*INVALVLLAEPFRA Trigger: TGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATGGACCCAGGAACTGCATAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAATTGGTTCCCTGCTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGACACTGCATAGTCACTaGGCATGTTCAGTGAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: ENWFPADLQGDLCLFTRLTLHSH*ACSVNF Trigger: GAAATTCACTGAACATGCTCAGTGACTATGCAGTGT...CAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAGCAGGGAACCAATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR TCA 90 bp | ATAAAAATAACAGCTTGTGCTGCCATTTCTAGATCAGAAAGAGCTTTCTGTGACGATCCTGTGGATTATTaGGGGAATCGACGTTCACGC | + |
|
Preference number: 2 (lower is better) Translates to: IKITACAAISRSERAFCDDPVDY*GNRRSR Trigger: GCGTGAACGTCGATTCCCTCAATAATCCACAGGATC...GTCACAGAAAGCTCTTTCTGATCTAGAAATGGCAGCACAAGCTGTTATTTTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTTCCAAAGGGCATGTATATATATGGATCAATGTTGCCCTTGTTCTCCTTGCAGAAAGAGCTTTCTGTaGCTCTTGGCCTTTGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: HFQRACIYMDQCCPCSPCRKSFL*LLAFGV Trigger: AACTCCAAAGGCCAAGAGTCACAGAAAGCTCTTTCT...GCAAGGAGAACAAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR CCA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAATGTGACTCTTGGCCTTTaGAGTTCTGAGTATTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: IYGSMLPLFSLLNLSGQNVTLGL*SSEYSS Trigger: TGATGAATACTCAGAACTCCAAAGGCCAAGAGTCAC...ATTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAATACAAGAATCAGAAGGTaGACATCCACAACTACCATT | + |
|
Preference number: 2 (lower is better) Translates to: IYGSMLPLFSLLNLSGQNTRIRR*TSTTTI Trigger: AATGGTAGTTGTGGATGTTCACCTTCTGATTCTTGT...ATTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAATCTTCTTGGCTTTCTaGACAAAGGGATCCTGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LVFYDTVSLKNITCFLREIFLAF*TKGSCG Trigger: TCCACAGGATCCCTTTGTGCAGAAAGCCAAGAAGAT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAACACTGCATAGTCACTaGGCATGTTCAGTGAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: LVFYDTVSLKNITCFLRETLHSH*ACSVNF Trigger: GAAATTCACTGAACATGCTCAGTGACTATGCAGTGT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAATGGGTTTTTCTGGTTaGAAAATTGGTTCCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LVFYDTVSLKNITCFLREMGFSG*KIGSLL Trigger: CAGCAGGGAACCAATTTTCCAACCAGAAAAACCCAT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAACAAGAATCAGAAGGTaGACATCCACAACTACCATT | + |
|
Preference number: 2 (lower is better) Translates to: LVFYDTVSLKNITCFLRETRIRR*TSTTTI Trigger: AATGGTAGTTGTGGATGTTCACCTTCTGATTCTTGT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| 3UTR GCA 72 bp | GTACTCCATGTCCATCAGGGCGTCATAGGTGACAGGTaGCTTATTGGGCAGAGTTCTGTCAATCTCATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLHVHQGVIGDR*LIGQSSVNLIL Trigger: CAGGATGAGATTGACAGAACTCTGCCCAATAAGGCACCTGTCACCTATGACGCCCTGATGGACATGGAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR GCA 72 bp | ATCTGTGTCTCTTCACAAGGCTGGACAGTGAAGTTCTaGAGGACTCCTATGACAGCAAGTTTGATGCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: ICVSSQGWTVKF*RTPMTASLMLM Trigger: CATCAGCATCAAACTTGCTGTCATAGGAGTCCTGCAGAACTTCACTGTCCAGCCTTGTGAAGAGACACAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR-3UTR CAA 90 bp | ATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTGAACCTTTCAGGGCAGAATATAACTACGGTCCCTTaGGGAATGAACACTCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: IYGSMLPLFSLLNLSGQNITTVP*GMNTPL Trigger: CAATGGAGTGTTCATTCCCAAAGGGACCGTAGTTAT...ATTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR TCA 72 bp | GGAATTAGTGTAGACATTCCCACAAGAATCAGAAGGTaGACATCCACAACTACCATTGAGTTAATAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GISVDIPTRIRR*TSTTTIELIIS Trigger: GGAAATTATTAACTCAATGGTAGTTGTGGATGTTCACCTTCTGATTCTTGTGGGAATGTCTACACTAATTCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR TCA 90 bp | CATGTCCATCAGGGCGTCATAGGTGACAGGTGCCTTATTGGGCAGAGTTCTGTCAAAACCGACGGTTTGTaGAGACTGAGTAACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVHQGVIGDRCLIGQSSVKTDGL*RLSNIL Trigger: AAGAATGTTACTCAGTCTTCACAAACCGTCGGTTTT...GACAGAACTCTGCCCAATAAGGCACCTGTCACCTATGACGCCCTGATGGACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAAAGGGATCCTGTGGATTATTGAGGGAATCGACGTTCACGCCAAATGATGCCACTGGTGAAGGTTaGAGACAGGAGTGTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CTKGSCGLLRESTFTPNDATGEG*RQECSK Trigger: CTTAGAACACTCCTGTCTCCAACCTTCACCAGTGGC...ATCATTTGGCGTGAACGTCGATTCCCTCAATAATCCACAGGATCCCTTTGTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| 3UTR CAA 72 bp | CCAAAGGGCATGTATATATATGGATCAATGTTGCCCTaGTTCTCCTTGCTGAACCTTTCAGGGCAGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: PKGMYIYGSMLP*FSLLNLSGQNS Trigger: GGAATTCTGCCCTGAAAGGTTCAGCAAGGAGAACAAGGGCAACATTGATCCATATATATACATGCCCTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAACACAAGGCTGGACAGTaGAGTTCTGCAGGACTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREHKAGQ*SSAGLL Trigger: TAGGAGTCCTGCAGAACTTCACTGTCCAGCCTTGTG...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGATCCTGTGGATTATTaGGGGAATCGACGTTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREDPVDY*GNRRSR Trigger: GCGTGAACGTCGATTCCCTCAATAATCCACAGGATC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGCCACTGGTGAAGGTTaGAGACAGGAGTGTTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREATGEG*RQECSK Trigger: CTTAGAACACTCCTGTCTCCAACCTTCACCAGTGGC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGTCTCTTCACAAGGCTaGACAGTGAAGTTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREVSSQG*TVKFCR Trigger: CCTGCAGAACTTCACTGTCCAGCCTTGTGAAGAGAC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAATCCACTCGGTTCTTCTaGTTTGAAGCAAGGCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLRESTRFF*FEARRS Trigger: AGAACGCCTTGCTTCAAACCAGAAGAACCGAGTGGA...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAAGATGTCTTTCATACTaGTGGGCTCCCCTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLRERCLSY*WAPLSL Trigger: AAGAGAAAGGGGAGCCCATCAGTATGAAAGACATCT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAAGAAAGAGCTTTCTGTaGCTCTTGGCCTTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLRERKSFL*LLAFGV Trigger: AACTCCAAAGGCCAAGAGTCACAGAAAGCTCTTTCT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAATGCCATCATAGTAGTTaGAAATGGTGCCAAGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLRECHHSS*KWCQVT Trigger: CGTTACTTGGCACCATTTTCAACTACTATGATGGCA...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAATGGCCTTTGGAGTTCTaGGTATTCATCATCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREWPLEF*VFIISC Trigger: ACAACTGATGATGAATACTCAGAACTCCAAAGGCCA...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAACCAGTTCATACATTATaGGGGAAATGGAAGTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREPVHTL*GKWKCL Trigger: CAAGCACTTCCATTTCCCTCATAATGTATGAACTGG...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CCA 90 bp | TCCACTCGGTTCTTCTGGTTTGAAGCAAGGCGTTCTTTCTTCATCCTTTTTACAAATCTTGATGATCTCTaGATCCATGATAGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: STRFFWFEARRSFFILFTNLDDL*IHDSQY Trigger: ATATTGGCTATCATGGATCCAGAGATCATCAAGATT...TGTAAAAAGGATGAAGAAAGAACGCCTTGCTTCAAACCAGAAGAACCGAGTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGTGACTCTTGGCCTTTaGAGTTCTGAGTATTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREVTLGL*SSEYSS Trigger: TGATGAATACTCAGAACTCCAAAGGCCAAGAGTCAC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGTGAAGAGGATAGATTaGTATCATAACTACGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREVKRID*YHNYGP Trigger: GGGACCGTAGTTATGATACCAATCTATCCTCTTCAC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR TCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAAAAACCGACGGTTTGTaGAGACTGAGTAACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREKTDGL*RLSNIL Trigger: AAGAATGTTACTCAGTCTTCACAAACCGTCGGTTTT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGATGATGGGTTTTTCTaGTTGGAAAATTGGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREDDGFF*LENWFP Trigger: AGGGAACCAATTTTCCAACCAGAAAAACCCATCATC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGGGCATGTATATATATaGATCAATGTTGCCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREGHVYI*INVALV Trigger: AACAAGGGCAACATTGATCCATATATATACATGCCC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAAATCTTGATGATCTCTaGATCCATGATAGCCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLRENLDDL*IHDSQY Trigger: ATATTGGCTATCATGGATCCAGAGATCATCAAGATT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAATTTTAAGATCTTCTTaGCTTTCTGCACAAAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVFYDTVSLKNITCFLREILRSS*LSAQRD Trigger: ATCCCTTTGTGCAGAAAGCCAAGAAGATCTTAAAAT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CAA 90 bp | CATGTCCATCAGGGCGTCATAGGTGACAGGTGCCTTATTGGGCAGAGTTCTGTCCTCCAAAGATGCTCCTaGAGTTTGCCACTGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HVHQGVIGDRCLIGQSSVLQRCS*SLPLVK Trigger: CTTCACCAGTGGCAAACTCAAGGAGCATCTTTGGAG...GACAGAACTCTGCCCAATAAGGCACCTGTCACCTATGACGCCCTGATGGACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| CDS-3UTR CAA 90 bp | GAAAATTGGTTCCCTGCTGATCTTCAGGGGGATCTGTGTCTCTTCACAAGGCTGGTAACGGTAGAGGTTTaGGTCCAGGAATTCCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ENWFPADLQGDLCLFTRLVTVEV*VQEFLV Trigger: AACTAGGAATTCCTGGACCAAAACCTCTACCGTTAC...CAGCCTTGTGAAGAGACACAGATCCCCCTGAAGATCAGCAGGGAACCAATTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| CDS-3UTR CAA 90 bp | CATTTCCAAAGGGCATGTATATATATGGATCAATGTTGCCCTTGTTCTCCTTGCTTCACCAGCACAATCTaGATGATCTCTGGATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: HFQRACIYMDQCCPCSPCFTSTI*MISGSM Trigger: CATGGATCCAGAGATCATCAAGATTGTGCTGGTGAA...GCAAGGAGAACAAGGGCAACATTGATCCATATATATACATGCCCTTTGGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145062.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAATGGGGAACATCTCCTaGAGTTTGCCACTGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVFYDTVSLKNITCFLREMGNIS*SLPLVK Trigger: CTTCACCAGTGGCAAACTCAAGGAGATGTTCCCCAT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGTAACGGTAGAGGTTTaGGTCCAGGAATTCCTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVFYDTVSLKNITCFLREVTVEV*VQEFLV Trigger: AACTAGGAATTCCTGGACCAAAACCTCTACCGTTAC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAATTCACCAGCACAATCTaGATGATCTCTGGATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LVFYDTVSLKNITCFLREFTSTI*MISGSM Trigger: CATGGATCCAGAGATCATCAAGATTGTGCTGGTGAA...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068317.13 ENSMUST00000145062.8 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAATAACTACGGTCCCTTaGGGAATGAACACTCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LVFYDTVSLKNITCFLREITTVP*GMNTPL Trigger: CAATGGAGTGTTCATTCCCAAAGGGACCGTAGTTAT...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS-3UTR CAA 90 bp | CTTGTGTTCTATGACACAGTCTCCTTGAAGAATATAACATGTTTTCTGAGGGAAGATGGGTTTTTCTGGTaGGAAAATTGGTTCCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVFYDTVSLKNITCFLREDGFFW*ENWFPA Trigger: AGCAGGGAACCAATTTTCCAACCAGAAAAACCCATC...TTCCCTCAGAAAACATGTTATATTCTTCAAGGAGACTGTGTCATAGAACACAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||
| CDS TCA 90 bp | TTTTATAGCAATCTTCATCAAATTTCCACATGCCATCATAGTAGTTaGAAATGGTGCCAAGTAACGGTAGAGGTTTTGGTCCAGGAATTC | + |
|
Preference number: 5 (lower is better) Translates to: FYSNLHQISTCHHSS*KWCQVTVEVLVQEF Trigger: GAATTCCTGGACCAAAACCTCTACCGTTACTTGGCACCATTTTCAACTACTATGATGGCATGTGGAAATTTGATGAAGATTGCTATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000068317.13 ENSMUST00000138870.2 ENSMUST00000145062.8 |
||
| CDS TCA 72 bp | CATCCATGCTATAAGCTCCAAAGATGTCTTTCATACTaGTGGGCTCCCCTTTCTCTTCTTCTCGTCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HPCYKLQRCLSY*WAPLSLLLVSS Trigger: ACTTGAGACGAGAAGAAGAGAAAGGGGAGCCCATCAGTATGAAAGACATCTTTGGAGCTTATAGCATGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068317.13 |
||