Pregenerated sensors for CYP3A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029727Ensembl transcript IDs: ENSMUST00000031741.8
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATACTGAGAAGTTTAGCAAGAAGGAAGGCACAAGTAAGGATGCTTaGATCCACTTAGAAGGAGGCAAAACAGTCATGGAAGGCAGAAGG | + |
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Preference number: 1 (lower is better) Translates to: DTEKFSKKEGTSKDA*IHLEGGKTVMEGRR Trigger: CCTTCTGCCTTCCATGACTGTTTTGCCTCCTTCTAAGTGGATTCAAGCATCCTTACTTGTGCCTTCCTTCTTGCTAAACTTCTCAGTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CCA 90 bp | AAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTaGTTCACTAAGCTAGACTTGGGTAGAATCATTCCTTTGGTATCT | + |
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Preference number: 1 (lower is better) Translates to: KQPLTHDSVSTLERH*FTKLDLGRIIPLVS Trigger: AGATACCAAAGGAATGATTCTACCCAAGTCTAGCTTAGTGAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CCA 90 bp | ACATCGGCAGCCCCACAAGAACCAGGGAGTTGGATATATTTATCTTaGATTTGTGTCGTTACACCCTTATGTTCCACAGAAGATAACTTT | + |
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Preference number: 1 (lower is better) Translates to: TSAAPQEPGSWIYLS*ICVVTPLCSTEDNF Trigger: AAAGTTATCTTCTGTGGAACATAAGGGTGTAACGACACAAATCCAAGATAAATATATCCAACTCCCTGGTTCTTGTGGGGCTGCCGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR TCA 90 bp | GTCCTTCCAGAACTCTCTAGGAAAAGTCAATATCACCATGTTTATTaGCTTCTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAA | + |
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Preference number: 1 (lower is better) Translates to: VLPELSRKSQYHHVY*LLSLVHHCSVLQIK Trigger: TTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAGAAGTCAATAAACATGGTGATATTGACTTTTCCTAGAGAGTTCTGGAAGGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAAGGATGGGGAGAGGAATaGGAGGTCACGATCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KVTQTTHMQVFTEASRGQGWGEE*EVTIRC Trigger: ACACCTGATCGTGACCTCCCATTCCTCTCCCCATCC...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAAAACTTTCACAGAGACTaGGCAAGTTCAAAGAACACC | + |
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Preference number: 2 (lower is better) Translates to: KVTQTTHMQVFTEASRGQNFHRD*ASSKNT Trigger: GGTGTTCTTTGAACTTGCTCAGTCTCTGTGAAAGTT...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAGAGGAAGAAACTTGGTaGAAGAGGGGATGGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQEEETW*KRGWGE Trigger: CTCTCCCCATCCCCTCTTCCACCAAGTTTCTTCCTC...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAATTCACAATATGAATTaGTTTCTGGTCCACAGGATA | + |
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Preference number: 2 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQIHNMN*FLVHRI Trigger: TATCCTGTGGACCAGAAACCAATTCATATTGTGAAT...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CAA 90 bp | AGTAACAATGAAGTGAACATCGGCAGCCCCACAAGAACCAGGGAGTaGGATATATTTATCTTGGATTTGTGTCGTTACACCCTTATGTTC | + |
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Preference number: 2 (lower is better) Translates to: SNNEVNIGSPTRTRE*DIFILDLCRYTLMF Trigger: GAACATAAGGGTGTAACGACACAAATCCAAGATAAATATATCCAACTCCCTGGTTCTTGTGGGGCTGCCGATGTTCACTTCATTGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR GCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCATCATTGTAGTGTGCTaGAAATCAAAAGGTTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: CKQPLTHDSVSTLERHWFIIVVC*KSKGLV Trigger: TACCAAACCTTTTGATTTGCAGCACACTACAATGAT...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTCCAGAACTCTCTAGGAAAAGTCAATATCACCATGTTTATTGACTTCTCAGGAATCCTTCAGGAGTaGACGAAATTATTGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: SFQNSLGKVNITMFIDFSGILQE*TKLLQS Trigger: AGATTGCAATAATTTCGTGCACTCCTGAAGGATTCC...TGAGAAGTCAATAAACATGGTGATATTGACTTTTCCTAGAGAGTTCTGGAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATTGGATATATTTATCTTaGATTTGTGTCGTTACACCC | + |
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Preference number: 2 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNWIYLS*ICVVTP Trigger: GGGTGTAACGACACAAATCCAAGATAAATATATCCA...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAAGAAGGAGGAAGAAACTaGGTGGAAGAGGGGATGGGG | + |
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Preference number: 3 (lower is better) Translates to: KVTQTTHMQVFTEASRGQEGGRN*VEEGMG Trigger: CCCCATCCCCTCTTCCACCAAGTTTCTTCCTCCTTC...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR GCA 72 bp | CAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTaGAACTGTGAAGGACATGCATGGTATGTATTCCCT | + |
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Preference number: 3 (lower is better) Translates to: QQRAIDHGTGVT*NCEGHAWYVFP Trigger: AGGGAATACATACCATGCATGTCCTTCACAGTTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CCA 72 bp | CTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTaGTTCACTAAGCTAGACTTGGGTAGAATCATTCCT | + |
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Preference number: 3 (lower is better) Translates to: LTHDSVSTLERH*FTKLDLGRIIP Trigger: AGGAATGATTCTACCCAAGTCTAGCTTAGTGAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CAA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCCATTCACAATATGAATaGGTTTCTGGTCCACAGGAT | + |
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Preference number: 3 (lower is better) Translates to: CKQPLTHDSVSTLERHWFHSQYE*VSGPQD Trigger: ATCCTGTGGACCAGAAACCAATTCATATTGTGAATG...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CCA 72 bp | GCCCCACAAGAACCAGGGAGTTGGATATATTTATCTTaGATTTGTGTCGTTACACCCTTATGTTCCACAGAA | + |
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Preference number: 3 (lower is better) Translates to: APQEPGSWIYLS*ICVVTPLCSTE Trigger: TTCTGTGGAACATAAGGGTGTAACGACACAAATCCAAGATAAATATATCCAACTCCCTGGTTCTTGTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR GCA 72 bp | GAGCAAGTTCAAAGAACACCCGGAATCCTTCAGGAGTaGACGAAATTATTGCAATCTTTATCTCTGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: EQVQRTPGILQE*TKLLQSLSLDS Trigger: TGAATCCAGAGATAAAGATTGCAATAATTTCGTGCACTCCTGAAGGATTCCGGGTGTTCTTTGAACTTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CCA 72 bp | TGTGAAGGACATGCATGGTATGTATTCCCTGATACGTaGGTATTAACCATGAAGAACAGAATACCCATGATA | + |
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Preference number: 3 (lower is better) Translates to: CEGHAWYVFPDT*VLTMKNRIPMI Trigger: TATCATGGGTATTCTGTTCTTCATGGTTAATACCCACGTATCAGGGAATACATACCATGCATGTCCTTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR GCA 72 bp | GAACACCCGGAATCCTTCAGGAGTGCACGAAATTATTaGAATCTTTATCTCTGGATTCATTCACAATATGAA | + |
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Preference number: 3 (lower is better) Translates to: EHPESFRSARNY*NLYLWIHSQYE Trigger: TTCATATTGTGAATGAATCCAGAGATAAAGATTGCAATAATTTCGTGCACTCCTGAAGGATTCCGGGTGTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATGAGTGCACGAAATTATaGCAATCTTTATCTCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNECTKL*QSLSLD Trigger: ATCCAGAGATAAAGATTGCAATAATTTCGTGCACTC...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAAGAATTCCTCAGGCTCTaGCCAGTACTTCGGGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KVTQTTHMQVFTEASRGQEFLRL*PVLRVF Trigger: AAAGACCCGAAGTACTGGCCAGAGCCTGAGGAATTC...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR GCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAACAAAGGAAAGAGCACTaGTTGTGGTCTCATAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: KVTQTTHMQVFTEASRGQQRKEH*LWSHSQ Trigger: CTGGCTATGAGACCACAAGCAGTGCTCTTTCCTTTG...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAATGGAAAGAGTGTCACTaGGAGGAACAGTGGATCAAA | + |
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Preference number: 4 (lower is better) Translates to: KVTQTTHMQVFTEASRGQWKECH*EEQWIK Trigger: TTTGATCCACTGTTCCTCTCAGTGACACTCTTTCCA...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR GCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAATCATAGGTGGCAGGTaGCTTATTGGGCAGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQIIGGR*LIGQSR Trigger: GCGGCTCTGCCCAATAAGGCACCTGCCACCTATGAT...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAATGTCTTTCATGCTGGTaGGCTTTCCTTCTCCTAATC | + |
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Preference number: 4 (lower is better) Translates to: KVTQTTHMQVFTEASRGQCLSCW*AFLLLI Trigger: GATTAGGAGAAGGAAAGCCCACCAGCATGAAAGACA...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAACGATTGGATATAATCTaGGAGTTTCATTCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: KVTQTTHMQVFTEASRGQRLDII*EFHSPP Trigger: TGGTGGTGAATGAAACTCTCAGATTATATCCAATCG...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR GCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAACCTTCTCCTAATCCCTaGCTCATGTTTCTCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQPSPNP*LMFLTN Trigger: GTTGGTGAGAAACATGAGGCAGGGATTAGGAGAAGG...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | AAGGTAACCCAGACCACCCACATGCAGGTGTTCACAGAGGCCAGCAGAGGGCAAAACACATCTGTAAACTaGTTAATGATGGGGAACATC | + |
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Preference number: 4 (lower is better) Translates to: KVTQTTHMQVFTEASRGQNTSVN*LMMGNI Trigger: GATGTTCCCCATCATTAACCAGTTTACAGATGTGTT...TTGCCCTCTGCTGGCCTCTGTGAACACCTGCATGTGGGTGGTCTGGGTTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCTGGACAGTGAAGTTCTaGAGGACTCTGACAAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFWTVKF*RTLTRA Trigger: TGCTCTTGTCAGAGTCCTGCAGAACTTCACTGTCCA...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCGTGAAGAGCAAAGGTTaGTATCATCACCACAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFVKSKG*YHHHSP Trigger: GGGACTGTGGTGATGATACCAACCTTTGCTCTTCAC...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCGTTTCCTTACAAGGCTaGACAGTGAAGTTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFVSLQG*TVKFCR Trigger: CCTGCAGAACTTCACTGTCCAGCCTTGTAAGGAAAC...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCGATCCTGTGGGTTGTTaGGGGAATCAATATTCACTC | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFDPVGC*GNQYSL Trigger: GAGTGAATATTGATTCCCTCAACAACCCACAGGATC...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCCAAAGATGTCTTTCATaGTGGTGGGCTTTCCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFQRCLS*WWAFLL Trigger: GAGAAGGAAAGCCCACCAGCATGAAAGACATCTTTG...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR GCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCGGCCAGCAAATACAATaGAAAGGAAAGAGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFGQQIQ*KGKSTA Trigger: AGCAGTGCTCTTTCCTTTGCATTGTATTTGCTGGCC...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAGTACATCAGGGTGAATaGCCAGCAAATACAATGCAA | + |
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Preference number: 4 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQVHQGE*PANTMQ Trigger: TTGCATTGTATTTGCTGGCCATTCACCCTGATGTAC...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCAATATTCACTCCAAATaGGGTGGCTGTGATCACATC | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFNIHSK*GGCDHI Trigger: GATGTGATCACAGCCACCTCATTTGGAGTGAATATT...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAGAGTTTATCATCAGCTaGAGAAAATCCACTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQEFIIS*RKSTLC Trigger: GCAAAGAGTGGATTTTCTTCAGCTGATGATAAACTC...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| 3UTR CAA 72 bp | GAAGTGAACATCGGCAGCCCCACAAGAACCAGGGAGTaGGATATATTTATCTTGGATTTGTGTCGTTACACC | + |
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Preference number: 4 (lower is better) Translates to: EVNIGSPTRTRE*DIFILDLCRYT Trigger: GGTGTAACGACACAAATCCAAGATAAATATATCCAACTCCCTGGTTCTTGTGGGGCTGCCGATGTTCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCATAAAGATAACTGACTaGGCCACAATCTCCACATCA | + |
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Preference number: 4 (lower is better) Translates to: CKQPLTHDSVSTLERHWFIKITD*ATISTS Trigger: TGATGTGGAGATTGTGGCTCAGTCAGTTATCTTTAT...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAGCATCAATTTCATCCTaGAGTTTCTTCTGTACATCA | + |
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Preference number: 4 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQASISS*SFFCTS Trigger: TGATGTACAGAAGAAACTTCAGGATGAAATTGATGC...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATCCCACTGGTGAAGGTTaGAGACAGCAGGGCTCGGAT | + |
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Preference number: 4 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNPTGEG*RQQGSD Trigger: ATCCGAGCCCTGCTGTCTCCAACCTTCACCAGTGGG...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATGGATTGATGCTGTCCTaGTTCTTCTTGCTGAACCTT | + |
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Preference number: 4 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNGLMLS*FFLLNL Trigger: AAGGTTCAGCAAGAAGAATCAGGACAGCATCAATCC...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATAGATGTCTTTCATGCTaGTGGGCTTTCCTTCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNRCLSC*WAFLLL Trigger: TAGGAGAAGGAAAGCCCACCAGCATGAAAGACATCT...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATAAAAATAAAGATAACTaGCTGAGCCACAATCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNKNKDN*LSHNLH Trigger: GTGGAGATTGTGGCTCAGTCAGTTATCTTTATTTTT...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CAA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAATCACCACAGTCCCTTaGGGAATGAATAGCCCATTG | + |
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Preference number: 5 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQITTVP*GMNSPL Trigger: CAATGGGCTATTCATTCCCAAAGGGACTGTGGTGAT...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CAA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAGGATCCTGTGGGTTGTaGAGGGAATCAATATTCACT | + |
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Preference number: 5 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQGSCGL*RESIFT Trigger: AGTGAATATTGATTCCCTCAACAACCCACAGGATCC...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CAA 90 bp | TGTTCACAGAGGCCAGCAGAGGGCAATAGATCATGGAACTGGAGTTACCTGCAAGAGTGGGTTTTCTGGTaGAAGAAGTCCTTGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: CSQRPAEGNRSWNWSYLQEWVFW*KKSLFA Trigger: AGCAAACAAGGACTTCTTCAACCAGAAAACCCACTC...TTGCAGGTAACTCCAGTTCCATGATCTATTGCCCTCTGCTGGCCTCTGTGAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CAA 90 bp | TGTAAGCAACCACTCACCCATGACTCTGTAAGTACCCTTGAAAGGCACTGGTTCTTCACCAGCACTGTTTaGATTATGTCTGGATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: CKQPLTHDSVSTLERHWFFTSTV*IMSGSV Trigger: CACAGATCCAGACATAATCAAAACAGTGCTGGTGAA...GAACCAGTGCCTTTCAAGGGTACTTACAGAGTCATGGGTGAGTGGTTGCTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CAA 90 bp | TCCTTCCAGAACTCTCTAGGAAAAGTCAATATCACCATGTTTATTGACTTCTCAATGGGGAACATCTCCTaGAGCCTCCCACTGGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SFQNSLGKVNITMFIDFSMGNIS*SLPLVK Trigger: CTTCACCAGTGGGAGGCTCAAGGAGATGTTCCCCAT...TGAGAAGTCAATAAACATGGTGATATTGACTTTTCCTAGAGAGTTCTGGAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCTTAGTACATCATTGTAGTGTGCTGCAAATCAAAAGGTTTGGTAAAAATGTGGCAGGTGCCTTATaGGGCAGAGCCGCATCAATT | + |
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Preference number: 5 (lower is better) Translates to: LSLVHHCSVLQIKRFGKNVAGAL*GRAASI Trigger: AATTGATGCGGCTCTGCCCAATAAGGCACCTGCCAC...ATTTTTACCAAACCTTTTGATTTGCAGCACACTACAATGATGTACTAAGCTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS CCA 72 bp | CCATGCTGTAGGCCCCAAAGATGTCTTTCATGCTGGTaGGCTTTCCTTCTCCTAATCCCTGCCTCATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PCCRPQRCLSCW*AFLLLIPASCF Trigger: GAAACATGAGGCAGGGATTAGGAGAAGGAAAGCCCACCAGCATGAAAGACATCTTTGGGGCCTACAGCATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS CCA 72 bp | CATCCATGCTGTAGGCCCCAAAGATGTCTTTCATGCTaGTGGGCTTTCCTTCTCCTAATCCCTGCCTCATGT | + |
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Preference number: 6 (lower is better) Translates to: HPCCRPQRCLSC*WAFLLLIPASC Trigger: ACATGAGGCAGGGATTAGGAGAAGGAAAGCCCACCAGCATGAAAGACATCTTTGGGGCCTACAGCATGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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| CDS GCA 72 bp | ATCTCAGTTTCCTTACAAGGCTGGACAGTGAAGTTCTaGAGGACTCTGACAAGAGCAACTTTCATGTTTATG | + |
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Preference number: 6 (lower is better) Translates to: ISVSLQGWTVKF*RTLTRATFMFM Trigger: CATAAACATGAAAGTTGCTCTTGTCAGAGTCCTGCAGAACTTCACTGTCCAGCCTTGTAAGGAAACTGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031741.8 |
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